Pregenerated sensors for AGER (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015452Ensembl transcript IDs: ENSMUST00000015596.10, ENSMUST00000173992.8, ENSMUST00000174069.8, ENSMUST00000174496.9
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTGGGTaGTCTTACGGTCCCCCGGCACCATTCTCTGGCATCTCCGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: MWGSCSRAITQARSG*SYGPPAPFSGISAS Trigger: GGAAGCGGAGATGCCAGAGAATGGTGCCGGGGGACCGTAAGAGCACCCAGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| 3UTR TCA 90 bp | TACGGTCCCCCGGCACCATTCTCTGGCATCTCCGCTTCCTCTGACTaGTTCAGCTCTGCACGTTCCTCCTCATCCTCCTGGCTTTCCGGG | + |
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Preference number: 1 (lower is better) Translates to: YGPPAPFSGISASSD*FSSARSSSSSWLSG Trigger: CCCGGAAAGCCAGGAGGATGAGGAGGAACGTGCAGAGCTGAATCAGTCAGAGGAAGCGGAGATGCCAGAGAATGGTGCCGGGGGACCGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| 3UTR TCA 90 bp | CTCTTACGGTCCCCCGGCACCATTCTCTGGCATCTCCGCTTCCTCTaGCTGATTCAGCTCTGCACGTTCCTCCTCATCCTCCTGGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLRSPGTILWHLRFL*LIQLCTFLLILLAF Trigger: GAAAGCCAGGAGGATGAGGAGGAACGTGCAGAGCTGAATCAGTCAGAGGAAGCGGAGATGCCAGAGAATGGTGCCGGGGGACCGTAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| 3UTR CCA 90 bp | CTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTaGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: LVGEGSASRRNWDGM*GSCSRAITQARSGC Trigger: GCACCCAGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| 3UTR GCA 90 bp | GAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTaGTCTAGGGCCATCACACAGGCTCGATCTGGGTGCTCTTACGGT | + |
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Preference number: 1 (lower is better) Translates to: EGSASRRNWDGMWGS*SRAITQARSGCSYG Trigger: ACCGTAAGAGCACCCAGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| 3UTR CCA 90 bp | ATCATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTaGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCT | + |
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Preference number: 1 (lower is better) Translates to: IMWALVGEGSASRRN*DGMWGSCSRAITQA Trigger: AGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| 3UTR CCA 90 bp | CACCGTGTCAAATGTTTACTCAGCATGGATCATGTGGGCTCTGGTTaGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: HRVKCLLSMDHVGSG*RRKCLKEELGWNVG Trigger: CCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATGATCCATGCTGAGTAAACATTTGACACGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174496.9 |
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| 3UTR-3UTR CCA 90 bp | CGATCTGGGTGCTCTTACGGTCCCCCGGCACCATTCTCTGGCATCTCCGCTTCCGCCTCAAGGAGGAATTaGGATGGAATGTGGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: RSGCSYGPPAPFSGISASASRRN*DGMWGS Trigger: GCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGC...GGAAGCGGAGATGCCAGAGAATGGTGCCGGGGGACCGTAAGAGCACCCAGATCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTCGATCTGGGTGCTCTTACGGTCCCCCGGCACCATTCTCTGGCATCTCCGGGTTGGAGAAGGAAGTaGCTCAAGGAGGAATTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RLDLGALTVPRHHSLASPGWRRK*LKEELG Trigger: TCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACC...CGGAGATGCCAGAGAATGGTGCCGGGGGACCGTAAGAGCACCCAGATCGAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| 3UTR-3UTR CAA 90 bp | GCTCGATCTGGGTGCTCTTACGGTCCCCCGGCACCATTCTCTGGCATCTCCGCTTGCCTCAAGGAGGAATaGGGATGGAATGTGGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: ARSGCSYGPPAPFSGISACLKEE*GWNVGE Trigger: CTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCA...AGCGGAGATGCCAGAGAATGGTGCCGGGGGACCGTAAGAGCACCCAGATCGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| 3UTR GCA 72 bp | GCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTaGTCTAGGGCCATCACACAGGCTCGATCTGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: ASRRNWDGMWGS*SRAITQARSGC Trigger: GCACCCAGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| 3UTR TCA 72 bp | CCGGCACCATTCTCTGGCATCTCCGCTTCCTCTGACTaGTTCAGCTCTGCACGTTCCTCCTCATCCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: PAPFSGISASSD*FSSARSSSSSW Trigger: CCAGGAGGATGAGGAGGAACGTGCAGAGCTGAATCAGTCAGAGGAAGCGGAGATGCCAGAGAATGGTGCCGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| 3UTR CCA 72 bp | GAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTaGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGA | + |
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Preference number: 3 (lower is better) Translates to: EGSASRRNWDGM*GSCSRAITQAR Trigger: TCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| 3UTR CCA 72 bp | GCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTaGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATC | + |
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Preference number: 3 (lower is better) Translates to: ALVGEGSASRRN*DGMWGSCSRAI Trigger: GATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| 3UTR CCA 72 bp | AAATGTTTACTCAGCATGGATCATGTGGGCTCTGGTTaGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGG | + |
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Preference number: 3 (lower is better) Translates to: KCLLSMDHVGSG*RRKCLKEELGW Trigger: CCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATGATCCATGCTGAGTAAACATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | GATTCAGCTCTGCACGTTCCTCCTCATCCTCCTGGCTTTCCGGGGCCTTCCCACCTGTGTTCAGGGGTCTaGGCCGGGGAAGGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: DSALHVPPHPPGFPGPSHLCSGV*AGEGPG Trigger: GCCTGGGCCTTCCCCGGCGCAGACCCCTGAACACAG...GTGGGAAGGCCCCGGAAAGCCAGGAGGATGAGGAGGAACGTGCAGAGCTGAATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| CDS-3UTR GCA 90 bp | ATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTGGTGCCCTCATCCTCGTaGCCCACCTCAGGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IGMECGGAALGPSHRLDLVPSSS*PTSGRS Trigger: GCTCCTCCCTGAGGTGGGGCACGAGGATGAGGGCAC...CAGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | AGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGAGTGCCCTCATCCTCGTaGCCCACCTCAGGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RNWDGMWGSCSRAITQARVPSSS*PTSGRS Trigger: GCTCCTCCCTGAGGTGGGGCACGAGGATGAGGGCAC...TCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | TCAGCTCTGCACGTTCCTCCTCATCCTCCTGGCTTTCCGGGGCCTTCCCACAGACCACGCAGCTATAGGTaGCCTCATCCTCGTGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SALHVPPHPPGFPGPSHRPRSYR*PHPRAP Trigger: TGGGGCACGAGGATGAGGGCACCTATAGCTGCGTGG...TCTGTGGGAAGGCCCCGGAAAGCCAGGAGGATGAGGAGGAACGTGCAGAGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| CDS-3UTR CCA 90 bp | AGGCTCGATCTGGGTGCTCTTACGGTCCCCCGGCACCATTCTCTGGCATCTCCGTCCCTGACTCGGAGTTaGATGGGGGCTGTGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RLDLGALTVPRHHSLASPSLTRS*MGAVFR Trigger: CCTGAACACAGCCCCCATCCAACTCCGAGTCAGGGA...CGGAGATGCCAGAGAATGGTGCCGGGGGACCGTAAGAGCACCCAGATCGAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| CDS-3UTR GCA 90 bp | GATTCAGCTCTGCACGTTCCTCCTCATCCTCCTGGCTTTCCGGGGCCTTCCCACCCAGCTAAGGGTCCCTaGAGGGTAGCTTCCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: DSALHVPPHPPGFPGPSHPAKGP*RVASLR Trigger: TCTGAGGGAAGCTACCCTGCAGGGACCCTTAGCTGG...GTGGGAAGGCCCCGGAAAGCCAGGAGGATGAGGAGGAACGTGCAGAGCTGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| CDS-3UTR GCA 90 bp | CTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGACTGTGTTCAGGGGTCTaGGCCGGGGAAGGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LWLEKEVPQGGIGMECGGLCSGV*AGEGPG Trigger: GCCTGGGCCTTCCCCGGCGCAGACCCCTGAACACAG...TCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | TGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTCTGTGTTCAGGGGTCTaGGCCGGGGAAGGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: WLEKEVPQGGIGMECGGALCSGV*AGEGPG Trigger: GCCTGGGCCTTCCCCGGCGCAGACCCCTGAACACAG...AGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | AATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTGTGCCCTCATCCTCGTaGCCCACCTCAGGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NWDGMWGSCSRAITQARSVPSSS*PTSGRS Trigger: GCTCCTCCCTGAGGTGGGGCACGAGGATGAGGGCAC...AGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | GGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGGAGGAGGGAACCATTaGGGAGGATTCGAGCCACGC | + |
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Preference number: 4 (lower is better) Translates to: GGIGMECGGAALGPSHRLGGGNH*GGFEPR Trigger: GCGTGGCTCGAATCCTCCCCAATGGTTCCCTCCTCC...GAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | GCTCTGCACGTTCCTCCTCATCCTCCTGGCTTTCCGGGGCCTTCCCACAGAGCCTCTCAGGGTGTCTCCTaGTCTCTTCCTTCACGAGTG | + |
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Preference number: 4 (lower is better) Translates to: ALHVPPHPPGFPGPSHRASQGVS*SLPSRV Trigger: CACTCGTGAAGGAAGAGACCAGGAGACACCCTGAGA...GGCTCTGTGGGAAGGCCCCGGAAAGCCAGGAGGATGAGGAGGAACGTGCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
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| CDS-3UTR CCA 90 bp | GGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCTCCTCCTCATCCTCCTaGCTTTCCGGGGCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GGIGMECGGAALGPSHRLSSSSS*LSGAFL Trigger: GAGGAAGGCCCCGGAAAGCCAGGAGGATGAGGAGGA...GAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174496.9 |
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| CDS-3UTR TCA 90 bp | CATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGAGGCCCAGGCTCCCTaGCTCGGAGTTGGATGGGGG | + |
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Preference number: 4 (lower is better) Translates to: HVGSGWRRKCLKEELGWNEAQAP*LGVGWG Trigger: CCCCCATCCAACTCCGAGTCAGGGAGCCTGGGCCTC...ATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR TCA 90 bp | AGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTTTTATCCAGTGGACCTaGGGAGGGGGCTGGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: RRNWDGMWGSCSRAITQAFIQWT*GGGWAE Trigger: CTCTGCCCAGCCCCCTCCTCAGGTCCACTGGATAAA...AGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | ATGGATCATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGACTGTGTTCAGGGGTCTaGGCCGGGGAAGGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: MDHVGSGWRRKCLKEELGLCSGV*AGEGPG Trigger: GCCTGGGCCTTCCCCGGCGCAGACCCCTGAACACAG...TCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATGATCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | TTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTGTGCCCTCATCCTCGTaGCCCACCTCAGGGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LEKEVPQGGIGMECGGAAVPSSS*PTSGRS Trigger: GCTCCTCCCTGAGGTGGGGCACGAGGATGAGGGCAC...AGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | CAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGGGAGGAGGGAACCATTaGGGAGGATTCGAGCCACGC | + |
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Preference number: 4 (lower is better) Translates to: QGGIGMECGGAALGPSHRGGGNH*GGFEPR Trigger: GCGTGGCTCGAATCCTCCCCAATGGTTCCCTCCTCC...CCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | GGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATGGAGGAGGGAACCATTaGGGAGGATTCGAGCCACGC | + |
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Preference number: 4 (lower is better) Translates to: GIGMECGGAALGPSHRLDGGGNH*GGFEPR Trigger: GCGTGGCTCGAATCCTCCCCAATGGTTCCCTCCTCC...ATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | CAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGTCCTCCTCATCCTCCTaGCTTTCCGGGGCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QGGIGMECGGAALGPSHRSSSSS*LSGAFL Trigger: GAGGAAGGCCCCGGAAAGCCAGGAGGATGAGGAGGA...CCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | AATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTTCCCAGGGGCCTCCCTaGGGAGAGAGGACCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: NWDGMWGSCSRAITQARSSQGPP*GERTSF Trigger: GAAACTGGTCCTCTCTCCCCAGGGAGGCCCCTGGGA...AGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173992.8 |
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| CDS-3UTR TCA 90 bp | GTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTTTATCCAGTGGACCTaGGGAGGGGGCTGGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VGEGSASRRNWDGMWGSCFIQWT*GGGWAE Trigger: CTCTGCCCAGCCCCCTCCTCAGGTCCACTGGATAAA...GCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | GGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCCAGCTAAGGGTCCCTaGAGGGTAGCTTCCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GIGMECGGAALGPSHRLDPAKGP*RVASLR Trigger: TCTGAGGGAAGCTACCCTGCAGGGACCCTTAGCTGG...ATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | AGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCAACCAACAGCTGAATaGCCTCTGGAGGCCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RRNWDGMWGSCSRAITQAQPTAE*PLEAQA Trigger: AGCCTGGGCCTCCAGAGGGCATTCAGCTGTTGGTTG...AGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | AGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTGGGTTCCTCCTTGGGTaGGGATCACTGTCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RRNWDGMWGSCSRAITQAGFLLG*GSLSAL Trigger: CAGAGCTGACAGTGATCCCCACCCAAGGAGGAACCC...AGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | AGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGAGGGTTCCTCCTTGGGTaGGGATCACTGTCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RNWDGMWGSCSRAITQARGFLLG*GSLSAL Trigger: CAGAGCTGACAGTGATCCCCACCCAAGGAGGAACCC...TCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | ATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTGGGATGGGTTCCTCCTTaGGTGGGGATCACTGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: IGMECGGAALGPSHRLDLGWVPP*VGITVS Trigger: GCTGACAGTGATCCCCACCCAAGGAGGAACCCATCC...CAGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | GGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCAGGAGAAGGTAGGATaGGTTCCTCCTTGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GIGMECGGAALGPSHRLDQEKVG*VPPWVG Trigger: CCCCACCCAAGGAGGAACCCATCCTACCTTCTCCTG...ATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | CAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGTCCCTGACTCGGAGTTaGATGGGGGCTGTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGGIGMECGGAALGPSHRSLTRS*MGAVFR Trigger: CCTGAACACAGCCCCCATCCAACTCCGAGTCAGGGA...CCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | GTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCCTCCTCATCCTCCTaGCTTTCCGGGGCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGEGSASRRNWDGMWGSCSSSSS*LSGAFL Trigger: GAGGAAGGCCCCGGAAAGCCAGGAGGATGAGGAGGA...GCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | GGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGTCCCTCACCTTCAGCTaGCCCCTCATCGCCGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GWRRKCLKEELGWNVGELSLTFS*PLIAGF Trigger: GAAACCGGCGATGAGGGGCCAGCTGAAGGTGAGGGA...CAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174069.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTATTTATCCAGTGGACCTaGGGAGGGGGCTGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKEVPQGGIGMECGGAALFIQWT*GGGWAE Trigger: CTCTGCCCAGCCCCCTCCTCAGGTCCACTGGATAAA...TAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGATTTATCCAGTGGACCTaGGGAGGGGGCTGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWLEKEVPQGGIGMECGGFIQWT*GGGWAE Trigger: CTCTGCCCAGCCCCCTCCTCAGGTCCACTGGATAAA...TCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGCAACCAACAGCTGAATaGCCTCTGGAGGCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGSASRRNWDGMWGSCSRQPTAE*PLEAQA Trigger: AGCCTGGGCCTCCAGAGGGCATTCAGCTGTTGGTTG...CCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | CTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCCAACCAACAGCTGAATaGCCTCTGGAGGCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVGEGSASRRNWDGMWGSQPTAE*PLEAQA Trigger: AGCCTGGGCCTCCAGAGGGCATTCAGCTGTTGGTTG...GCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR GCA 90 bp | TTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCCACGCAGCTATAGGTaGCCTCATCCTCGTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKEVPQGGIGMECGGAAPRSYR*PHPRAP Trigger: TGGGGCACGAGGATGAGGGCACCTATAGCTGCGTGG...AGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR GCA 90 bp | GAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTACCACGCAGCTATAGGTaGCCTCATCCTCGTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKEVPQGGIGMECGGAALPRSYR*PHPRAP Trigger: TGGGGCACGAGGATGAGGGCACCTATAGCTGCGTGG...TAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCTCTCAGGGTGTCTCCTaGTCTCTTCCTTCACGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGIGMECGGAALGPSHRLSQGVS*SLPSRV Trigger: CACTCGTGAAGGAAGAGACCAGGAGACACCCTGAGA...GAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR CCA 90 bp | GTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCGGGTTCCTCCTTGGGTaGGGATCACTGTCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGEGSASRRNWDGMWGSCGFLLG*GSLSAL Trigger: CAGAGCTGACAGTGATCCCCACCCAAGGAGGAACCC...GCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR CCA 90 bp | AATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTGGGTTCCTCCTTGGGTaGGGATCACTGTCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NWDGMWGSCSRAITQARSGFLLG*GSLSAL Trigger: CAGAGCTGACAGTGATCCCCACCCAAGGAGGAACCC...AGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | GAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGCAGGAGAAGGTAGGATaGGTTCCTCCTTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGSASRRNWDGMWGSCSRQEKVG*VPPWVG Trigger: CCCCACCCAAGGAGGAACCCATCCTACCTTCTCCTG...CCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR CCA 90 bp | AATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTCAGGAGAAGGTAGGATaGGTTCCTCCTTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NWDGMWGSCSRAITQARSQEKVG*VPPWVG Trigger: CCCCACCCAAGGAGGAACCCATCCTACCTTCTCCTG...AGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR TCA 90 bp | TGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCCTCCAATCCGGGCTGTaGTGTTCTGACCACCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: WRRKCLKEELGWNVGELLLQSGL*CSDHQL Trigger: TAGCTGGTGGTCAGAACATCACAGCCCGGATTGGAG...GAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGTCCGCTTCCTCTGACTaGTTCAGCTCTGCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGSASRRNWDGMWGSCSRSASSD*FSSARS Trigger: GGAACGTGCAGAGCTGAATCAGTCAGAGGAAGCGGA...CCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174496.9 |
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| CDS-3UTR TCA 90 bp | GAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGCATCTCCGCTTCCTCTaGCTGATTCAGCTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: EGSASRRNWDGMWGSCSRHLRFL*LIQLCT Trigger: CGTGCAGAGCTGAATCAGTCAGAGGAAGCGGAGATG...CCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174496.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTCCAGCTAAGGGTCCCTaGAGGGTAGCTTCCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLEKEVPQGGIGMECGGAPAKGP*RVASLR Trigger: TCTGAGGGAAGCTACCCTGCAGGGACCCTTAGCTGG...AGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR GCA 90 bp | AATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTAGCCAGGGGCAAGGGTaGACCATCCTTTATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NWDGMWGSCSRAITQARSSQGQG*TILYPV Trigger: CACTGGATAAAGGATGGTGCACCCTTGCCCCTGGCT...AGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR GCA 90 bp | ATGGATCATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGACCACGCAGCTATAGGTaGCCTCATCCTCGTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MDHVGSGWRRKCLKEELGPRSYR*PHPRAP Trigger: TGGGGCACGAGGATGAGGGCACCTATAGCTGCGTGG...TCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATGATCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | CATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGGAGGAGGGAACCATTaGGGAGGATTCGAGCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: HVGSGWRRKCLKEELGWNGGGNH*GGFEPR Trigger: GCGTGGCTCGAATCCTCCCCAATGGTTCCCTCCTCC...ATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | AGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGACATCGACAATTCCAGTaGCTGGAAGGAGGAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RNWDGMWGSCSRAITQARHRQFQ*LEGGGN Trigger: GTTCCCTCCTCCTTCCAGCCACTGGAATTGTCGATG...TCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | ATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTGTCTCAGGGTGTCTCCTaGTCTCTTCCTTCACGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IGMECGGAALGPSHRLDLSQGVS*SLPSRV Trigger: CACTCGTGAAGGAAGAGACCAGGAGACACCCTGAGA...CAGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | TCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGGGATGGGTTCCTCCTTaGGTGGGGATCACTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGWRRKCLKEELGWNVGEGWVPP*VGITVS Trigger: GCTGACAGTGATCCCCACCCAAGGAGGAACCCATCC...CTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | GAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTACAGGAGAAGGTAGGATaGGTTCCTCCTTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKEVPQGGIGMECGGAALQEKVG*VPPWVG Trigger: CCCCACCCAAGGAGGAACCCATCCTACCTTCTCCTG...TAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | GAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTATCCCTGACTCGGAGTTaGATGGGGGCTGTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKEVPQGGIGMECGGAALSLTRS*MGAVFR Trigger: CCTGAACACAGCCCCCATCCAACTCCGAGTCAGGGA...TAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR TCA 90 bp | GGATCATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGCTCCAATCCGGGCTGTaGTGTTCTGACCACCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GSCGLWLEKEVPQGGIGMLQSGL*CSDHQL Trigger: TAGCTGGTGGTCAGAACATCACAGCCCGGATTGGAG...CATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR TCA 90 bp | GAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTACTCCAATCCGGGCTGTaGTGTTCTGACCACCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EKEVPQGGIGMECGGAALLQSGL*CSDHQL Trigger: TAGCTGGTGGTCAGAACATCACAGCCCGGATTGGAG...TAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR TCA 90 bp | TTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTTCCGCTTCCTCTGACTaGTTCAGCTCTGCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEKEVPQGGIGMECGGAASASSD*FSSARS Trigger: GGAACGTGCAGAGCTGAATCAGTCAGAGGAAGCGGA...AGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174496.9 |
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| CDS-3UTR TCA 90 bp | CTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGATCCGCTTCCTCTGACTaGTTCAGCTCTGCACGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LWLEKEVPQGGIGMECGGSASSD*FSSARS Trigger: GGAACGTGCAGAGCTGAATCAGTCAGAGGAAGCGGA...TCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR TCA 90 bp | TCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCATCTCCGCTTCCTCTaGCTGATTCAGCTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SGWRRKCLKEELGWNVGEHLRFL*LIQLCT Trigger: CGTGCAGAGCTGAATCAGTCAGAGGAAGCGGAGATG...CTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174496.9 |
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| CDS-3UTR TCA 90 bp | GATCATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGCATCTCCGCTTCCTCTaGCTGATTCAGCTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: DHVGSGWRRKCLKEELGWHLRFL*LIQLCT Trigger: CGTGCAGAGCTGAATCAGTCAGAGGAAGCGGAGATG...CCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR GCA 90 bp | ATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTGAGTTTCCCATCTAAGTaGCAGCTAAGGGTCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGMECGGAALGPSHRLDLSFPSK*QLRVPA Trigger: TGCAGGGACCCTTAGCTGGCACTTAGATGGGAAACT...CAGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR GCA 90 bp | TGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGAGCCAGGGGCAAGGGTaGACCATCCTTTATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WALVGEGSASRRNWDGMWSQGQG*TILYPV Trigger: CACTGGATAAAGGATGGTGCACCCTTGCCCCTGGCT...CCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
||
| CDS-3UTR GCA 90 bp | TGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTAGCCAGGGGCAAGGGTaGACCATCCTTTATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WLEKEVPQGGIGMECGGASQGQG*TILYPV Trigger: CACTGGATAAAGGATGGTGCACCCTTGCCCCTGGCT...AGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR CCA 90 bp | GTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCCATCGACAATTCCAGTaGCTGGAAGGAGGAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGEGSASRRNWDGMWGSCHRQFQ*LEGGGN Trigger: GTTCCCTCCTCCTTCCAGCCACTGGAATTGTCGATG...GCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGTCTCAGGGTGTCTCCTaGTCTCTTCCTTCACGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGSASRRNWDGMWGSCSRSQGVS*SLPSRV Trigger: CACTCGTGAAGGAAGAGACCAGGAGACACCCTGAGA...CCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
||
| CDS-3UTR CCA 90 bp | TGGATCATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGATGGGTTCCTCCTTaGGTGGGGATCACTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WIMWALVGEGSASRRNWDGWVPP*VGITVS Trigger: GCTGACAGTGATCCCCACCCAAGGAGGAACCCATCC...ATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
||
| CDS-3UTR CCA 90 bp | AGCATGGATCATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGTCCCTGACTCGGAGTTaGATGGGGGCTGTGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMDHVGSGWRRKCLKEELSLTRS*MGAVFR Trigger: CCTGAACACAGCCCCCATCCAACTCCGAGTCAGGGA...CAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATGATCCATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
||
| CDS-3UTR TCA 90 bp | ATCATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGACTCCAATCCGGGCTGTaGTGTTCTGACCACCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IMWALVGEGSASRRNWDGLQSGL*CSDHQL Trigger: TAGCTGGTGGTCAGAACATCACAGCCCGGATTGGAG...TCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGTTTCCCATCTAAGTaGCAGCTAAGGGTCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALVGEGSASRRNWDGMWGSFPSK*QLRVPA Trigger: TGCAGGGACCCTTAGCTGGCACTTAGATGGGAAACT...CCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | TGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTCATCGACAATTCCAGTaGCTGGAAGGAGGAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: WLEKEVPQGGIGMECGGAHRQFQ*LEGGGN Trigger: GTTCCCTCCTCCTTCCAGCCACTGGAATTGTCGATG...AGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | CTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGACAATTCCAGTGGCTaGAAGGAGGAGGGAACCATT | + |
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Preference number: 4 (lower is better) Translates to: LWLEKEVPQGGIGMECGGDNSSG*KEEGTI Trigger: AATGGTTCCCTCCTCCTTCCAGCCACTGGAATTGTC...TCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS-3UTR CCA 90 bp | CATGTGGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATCATCGACAATTCCAGTaGCTGGAAGGAGGAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: HVGSGWRRKCLKEELGWNHRQFQ*LEGGGN Trigger: GTTCCCTCCTCCTTCCAGCCACTGGAATTGTCGATG...ATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCCACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS CCA 90 bp | CTGCGCCGGGGAAGGCCCAGGCTGAAACTGCAGGAGAAGGTAGGATaGGTTCCTCCTTGGGTGGGGATCACTGTCAGCTCTGACCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LRRGRPRLKLQEKVG*VPPWVGITVSSDRS Trigger: ACTGCGGTCAGAGCTGACAGTGATCCCCACCCAAGGAGGAACCCATCCTACCTTCTCCTGCAGTTTCAGCCTGGGCCTTCCCCGGCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS TCA 90 bp | GTCCCACCAGGAGCGACTATTCCACCTTCAGGCTCAACCAACAGCTaGATGCCCTCTGGAGGCCCAGGCTCCCTGACTCGGAGTTGGATG | + |
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Preference number: 5 (lower is better) Translates to: VPPGATIPPSGSTNS*MPSGGPGSLTRSWM Trigger: CATCCAACTCCGAGTCAGGGAGCCTGGGCCTCCAGAGGGCATTCAGCTGTTGGTTGAGCCTGAAGGTGGAATAGTCGCTCCTGGTGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS TCA 90 bp | GAAGGTAGGATGGGTTCCTCCTTGGGTGGGGATCACTGTCAGCTCTaGCCGCAGTGTAAAGAGTCCCGTCTCAGGGTGTCTCCTGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: EGRMGSSLGGDHCQL*PQCKESRLRVSPGL Trigger: GAGACCAGGAGACACCCTGAGACGGGACTCTTTACACTGCGGTCAGAGCTGACAGTGATCCCCACCCAAGGAGGAACCCATCCTACCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS GCA 90 bp | TCGGACTCGGTAGTTGGACTTGACCTCCTTCCCTCGCCTGTTAGTTaGCCGACACCGGAAAGTCCCCTCATCGACAATTCCAGTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SDSVVGLDLLPSPVS*PTPESPLIDNSSGW Trigger: CCAGCCACTGGAATTGTCGATGAGGGGACTTTCCGGTGTCGGGCAACTAACAGGCGAGGGAAGGAGGTCAAGTCCAACTACCGAGTCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CAA 90 bp | CAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGAGGATGGGTTCCTCCTaGGGTGGGGATCACTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: QGGIGMECGGAALGPSHRRMGSS*GGDHCQ Trigger: CTGACAGTGATCCCCACCCAAGGAGGAACCCATCCT...CCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS TCA 90 bp | GGGCCCCCTTACAGCTTAGCACAAGTGGCTCTCCAATCCGGGCTGTaGTGTTCTGACCACCAGCTACAGCTCCCCATAGAGCAAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: GPPYSLAQVALQSGL*CSDHQLQLPIEQEP Trigger: TGGTTCTTGCTCTATGGGGAGCTGTAGCTGGTGGTCAGAACATCACAGCCCGGATTGGAGAGCCACTTGTGCTAAGCTGTAAGGGGGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CAA 90 bp | AATTGGGATGGAATGTGGGGGAGCTGCTCTAGGGCCATCACACAGGCTCGATCTAGGATGGGTTCCTCCTaGGGTGGGGATCACTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: NWDGMWGSCSRAITQARSRMGSS*GGDHCQ Trigger: CTGACAGTGATCCCCACCCAAGGAGGAACCCATCCT...AGATCGAGCCTGTGTGATGGCCCTAGAGCAGCTCCCCCACATTCCATCCCAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CAA 90 bp | GAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGGGAGCTGCTCTAGGAGGATGGGTTCCTCCTaGGGTGGGGATCACTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: EGSASRRNWDGMWGSCSRRMGSS*GGDHCQ Trigger: CTGACAGTGATCCCCACCCAAGGAGGAACCCATCCT...CCTAGAGCAGCTCCCCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS-3UTR CAA 90 bp | GGGCTCTGGTTGGAGAAGGAAGTGCCTCAAGGAGGAATTGGGATGGAATGTGGGAGGATGGGTTCCTCCTaGGGTGGGGATCACTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: GLWLEKEVPQGGIGMECGRMGSS*GGDHCQ Trigger: CTGACAGTGATCCCCACCCAAGGAGGAACCCATCCT...CCCACATTCCATCCCAATTCCTCCTTGAGGCACTTCCTTCTCCAACCAGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015596.10 ENSMUST00000174496.9 |
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| CDS TCA 90 bp | TTACAGCTTAGCACAAGTGGCTCTCCAATCCGGGCTGTGATGTTCTaGCCACCAGCTACAGCTCCCCATAGAGCAAGAACCAGCACCCAG | + |
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Preference number: 5 (lower is better) Translates to: LQLSTSGSPIRAVMF*PPATAPHRARTSTQ Trigger: CTGGGTGCTGGTTCTTGCTCTATGGGGAGCTGTAGCTGGTGGTCAGAACATCACAGCCCGGATTGGAGAGCCACTTGTGCTAAGCTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS TCA 72 bp | GGAGCGACTATTCCACCTTCAGGCTCAACCAACAGCTaGATGCCCTCTGGAGGCCCAGGCTCCCTGACTCGG | + |
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Preference number: 6 (lower is better) Translates to: GATIPPSGSTNS*MPSGGPGSLTR Trigger: CCGAGTCAGGGAGCCTGGGCCTCCAGAGGGCATTCAGCTGTTGGTTGAGCCTGAAGGTGGAATAGTCGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS CCA 72 bp | TCCACCTTCAGGCTCAACCAACAGCTGAATGCCCTCTaGAGGCCCAGGCTCCCTGACTCGGAGTTGGATGGG | + |
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Preference number: 6 (lower is better) Translates to: STFRLNQQLNAL*RPRLPDSELDG Trigger: CCCATCCAACTCCGAGTCAGGGAGCCTGGGCCTCCAGAGGGCATTCAGCTGTTGGTTGAGCCTGAAGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS CCA 72 bp | CCCGACACCGGAAAGTCCCCTCATCGACAATTCCAGTaGCTGGAAGGAGGAGGGAACCATTGGGGAGGATTC | + |
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Preference number: 6 (lower is better) Translates to: PDTGKSPHRQFQ*LEGGGNHWGGF Trigger: GAATCCTCCCCAATGGTTCCCTCCTCCTTCCAGCCACTGGAATTGTCGATGAGGGGACTTTCCGGTGTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS CCA 72 bp | GGAAGGCCCAGGCTGAAACTGCAGGAGAAGGTAGGATaGGTTCCTCCTTGGGTGGGGATCACTGTCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GRPRLKLQEKVG*VPPWVGITVSS Trigger: AGAGCTGACAGTGATCCCCACCCAAGGAGGAACCCATCCTACCTTCTCCTGCAGTTTCAGCCTGGGCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS TCA 72 bp | ATGGGTTCCTCCTTGGGTGGGGATCACTGTCAGCTCTaGCCGCAGTGTAAAGAGTCCCGTCTCAGGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: MGSSLGGDHCQL*PQCKESRLRVS Trigger: AGACACCCTGAGACGGGACTCTTTACACTGCGGTCAGAGCTGACAGTGATCCCCACCCAAGGAGGAACCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS TCA 72 bp | AGCACAAGTGGCTCTCCAATCCGGGCTGTGATGTTCTaGCCACCAGCTACAGCTCCCCATAGAGCAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: STSGSPIRAVMF*PPATAPHRART Trigger: GGTTCTTGCTCTATGGGGAGCTGTAGCTGGTGGTCAGAACATCACAGCCCGGATTGGAGAGCCACTTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS GCA 72 bp | GTAGTTGGACTTGACCTCCTTCCCTCGCCTGTTAGTTaGCCGACACCGGAAAGTCCCCTCATCGACAATTCC | + |
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Preference number: 6 (lower is better) Translates to: VVGLDLLPSPVS*PTPESPLIDNS Trigger: GGAATTGTCGATGAGGGGACTTTCCGGTGTCGGGCAACTAACAGGCGAGGGAAGGAGGTCAAGTCCAACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS TCA 72 bp | TACAGCTTAGCACAAGTGGCTCTCCAATCCGGGCTGTaGTGTTCTGACCACCAGCTACAGCTCCCCATAGAG | + |
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Preference number: 6 (lower is better) Translates to: YSLAQVALQSGL*CSDHQLQLPIE Trigger: CTCTATGGGGAGCTGTAGCTGGTGGTCAGAACATCACAGCCCGGATTGGAGAGCCACTTGTGCTAAGCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS CCA 72 bp | TCAGTTCTTCCTGTGTTCAGTTTCCATTCTAGCTGCTaGGGCGGCTTCTTAGGGGCCCCCTTACAGCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: SVLPVFSFHSSC*GGFLGAPLQLS Trigger: GCTAAGCTGTAAGGGGGCCCCTAAGAAGCCGCCCCAGCAGCTAGAATGGAAACTGAACACAGGAAGAACTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015596.10 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS CAA 90 bp | CCCGTCTCAGGGTGTCTCCTGGTCTCTTCCTTCACGAGTGTTTCTTaGCCATCGGGAATCAGAAGTTTCCCATCTAAGTGCCAGCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: PVSGCLLVSSFTSVS*PSGIRSFPSKCQLR Trigger: CCTTAGCTGGCACTTAGATGGGAAACTTCTGATTCCCGATGGCAAAGAAACACTCGTGAAGGAAGAGACCAGGAGACACCCTGAGACGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS GCA 72 bp | GGTGTCTCCTGGTCTCTTCCTTCACGAGTGTTTCTTTaGCATCGGGAATCAGAAGTTTCCCATCTAAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: GVSWSLPSRVFL*HRESEVSHLSA Trigger: GGCACTTAGATGGGAAACTTCTGATTCCCGATGGCAAAGAAACACTCGTGAAGGAAGAGACCAGGAGACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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| CDS CAA 72 bp | GGGTGTCTCCTGGTCTCTTCCTTCACGAGTGTTTCTTaGCCATCGGGAATCAGAAGTTTCCCATCTAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: GCLLVSSFTSVS*PSGIRSFPSKC Trigger: GCACTTAGATGGGAAACTTCTGATTCCCGATGGCAAAGAAACACTCGTGAAGGAAGAGACCAGGAGACACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015596.10 ENSMUST00000173992.8 ENSMUST00000174069.8 ENSMUST00000174496.9 |
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