Pregenerated sensors for AGBL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061298Ensembl transcript IDs: ENSMUST00000080744.13, ENSMUST00000097920.9, ENSMUST00000106587.9, ENSMUST00000106589.9, ENSMUST00000106591.8, ENSMUST00000106592.8, ENSMUST00000148038.2
Found 357 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACTGAGCAGATGTGAAGGGCAAAGGGGCTTCCAGGGCACTGAGTaGTCGGACATGTGGGACCTCATGAGAGAGGTATGTAGGATTTCC | + |
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Preference number: 1 (lower is better) Translates to: ALSRCEGQRGFQGTE*SDMWDLMREVCRIS Trigger: GGAAATCCTACATACCTCTCTCATGAGGTCCCACATGTCCGACCACTCAGTGCCCTGGAAGCCCCTTTGCCCTTCACATCTGCTCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR TCA 90 bp | AAAGGGGCTTCCAGGGCACTGAGTGGTCGGACATGTGGGACCTCATaGGAGAGGTATGTAGGATTTCCTCTGCTCCATGGAAGAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: KGASRALSGRTCGTS*ERYVGFPLLHGRES Trigger: GCTTTCTCTTCCATGGAGCAGAGGAAATCCTACATACCTCTCTCATGAGGTCCCACATGTCCGACCACTCAGTGCCCTGGAAGCCCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR GCA 90 bp | CCCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTaGCTGGAGTGTGCTCCTTTGTCTCCTGTAGCCCCCTTACCTGGT | + |
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Preference number: 1 (lower is better) Translates to: PLGIASAVLVFYLPT*LECAPLSPVAPLPG Trigger: ACCAGGTAAGGGGGCTACAGGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR CCA 90 bp | ACAGGAATGCAGAAGCAGTGGGACAGACATGGGCCCCAGGGCCTATaGAAGATGTGGCACCTGGAAGCATCAGTTGAGATCTCTATGTTC | + |
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Preference number: 1 (lower is better) Translates to: TGMQKQWDRHGPQGL*KMWHLEASVEISMF Trigger: GAACATAGAGATCTCAACTGATGCTTCCAGGTGCCACATCTTCCATAGGCCCTGGGGCCCATGTCTGTCCCACTGCTTCTGCATTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR TCA 90 bp | GGGCTCAGTCTTGGTGTCTGTGGGCAGAGCATCCAGTTCTTATCATaGCATCTCCAAGGCTCTAGGAAGTCTGAAACACTGACCTACCAC | + |
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Preference number: 1 (lower is better) Translates to: GLSLGVCGQSIQFLS*HLQGSRKSETLTYH Trigger: GTGGTAGGTCAGTGTTTCAGACTTCCTAGAGCCTTGGAGATGTCATGATAAGAACTGGATGCTCTGCCCACAGACACCAAGACTGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR GCA 90 bp | ATTCCCAGCACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATaGTCCCATCCCAGTCTTCTTTCCTCCTTGGATCTACAAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: IPSTSSGCSALRQDG*SHPSLLSSLDLQVG Trigger: ACCCACTTGTAGATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTGGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
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| 3UTR GCA 90 bp | CAGGAGATGAGGCCCAGAGGTAGGGTACTGCTACCACAATCCAGATaGCACTGGATGTCATTGCCAAGATGCTCATTGAGTGCTTTACCA | + |
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Preference number: 1 (lower is better) Translates to: QEMRPRGRVLLPQSR*HWMSLPRCSLSALP Trigger: TGGTAAAGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCTGGGCCTCATCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
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| 3UTR CCA 90 bp | GGGAATTCCCAGCACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATaGATGCTCCCATCCCAGTCTTCTTTCCTCCTTGGATCTACAAGT | + |
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Preference number: 1 (lower is better) Translates to: GNSQHFQWLFSPQTR*MLPSQSSFLLGSTS Trigger: ACTTGTAGATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTGGGAATTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
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| 3UTR CCA 90 bp | AGTGGGACAGACATGGGCCCCAGGGCCTATGGAAGATGTGGCACCTaGAAGCATCAGTTGAGATCTCTATGTTCATATATGAAGGGCATG | + |
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Preference number: 1 (lower is better) Translates to: SGTDMGPRAYGRCGT*KHQLRSLCSYMKGM Trigger: CATGCCCTTCATATATGAACATAGAGATCTCAACTGATGCTTCCAGGTGCCACATCTTCCATAGGCCCTGGGGCCCATGTCTGTCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR CCA 90 bp | ATGAGGCCCAGAGGTAGGGTACTGCTACCACAATCCAGATGCCACTaGATGTCATTGCCAAGATGCTCATTGAGTGCTTTACCAGAACAC | + |
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Preference number: 1 (lower is better) Translates to: MRPRGRVLLPQSRCH*MSLPRCSLSALPEH Trigger: GTGTTCTGGTAAAGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCTGGGCCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
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| 3UTR TCA 90 bp | GTAGTCACCTTGTTCTCATTGCAGATTATCAGTGCTTACCTCCCCTaGTCCTTGTCACCAGGGACTGCAGACCTTAACCACAGCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: VVTLFSLQIISAYLP*SLSPGTADLNHSSS Trigger: AGAACTGCTGTGGTTAAGGTCTGCAGTCCCTGGTGACAAGGATCAGGGGAGGTAAGCACTGATAATCTGCAATGAGAACAAGGTGACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR CCA 90 bp | CACTCAGAAGGCAGAGACAGTGAATTTCTGAATTCGAGGTTAGCCTaGTCTACAAAGCAAGTTACAGGAGAGCCAGGGCTGCACAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: HSEGRDSEFLNSRLA*STKQVTGEPGLHKE Trigger: TTCTTTGTGCAGCCCTGGCTCTCCTGTAACTTGCTTTGTAGACCAGGCTAACCTCGAATTCAGAAATTCACTGTCTCTGCCTTCTGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
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| 3UTR TCA 90 bp | TTTGCCACAATACTGAAGGAGACCAAAGTAGGTGTGGTGTGGAGTTaGTCTTCACCTGTGTCTTTAAGGAGTTGGAGGATCACACTACCA | + |
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Preference number: 1 (lower is better) Translates to: FATILKETKVGVVWS*SSPVSLRSWRITLP Trigger: TGGTAGTGTGATCCTCCAACTCCTTAAAGACACAGGTGAAGATCAACTCCACACCACACCTACTTTGGTCTCCTTCAGTATTGTGGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR TCA 90 bp | CAGTTCGACATTGAAATATTCTGTGCCCATCACCTAGTATTGGTCTaGAGCAGCTCTCATGTGGATTGTTCCACCAACCTCTTACTGTAT | + |
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Preference number: 1 (lower is better) Translates to: QFDIEIFCAHHLVLV*SSSHVDCSTNLLLY Trigger: ATACAGTAAGAGGTTGGTGGAACAATCCACATGAGAGCTGCTTCAGACCAATACTAGGTGATGGGCACAGAATATTTCAATGTCGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR TCA 90 bp | CCACCAACCTCTTACTGTATGTCCCTGCCTTTAGTACAGCCAGGGTaGCTTCCCACTATTTACAAAACATCTATTGTTCTTCATTACCTA | + |
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Preference number: 1 (lower is better) Translates to: PPTSYCMSLPLVQPG*LPTIYKTSIVLHYL Trigger: TAGGTAATGAAGAACAATAGATGTTTTGTAAATAGTGGGAAGTCACCCTGGCTGTACTAAAGGCAGGGACATACAGTAAGAGGTTGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR TCA 90 bp | TTGTCACCAGGGACTGCAGACCTTAACCACAGCAGTTCTTGGGAATaGATGTGCAATACTTTTTGTTTGGAGGAGCTAGAAATTCAATTA | + |
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Preference number: 1 (lower is better) Translates to: LSPGTADLNHSSSWE*MCNTFCLEELEIQL Trigger: TAATTGAATTTCTAGCTCCTCCAAACAAAAAGTATTGCACATTCATTCCCAAGAACTGCTGTGGTTAAGGTCTGCAGTCCCTGGTGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR TCA 90 bp | TTTGACAATCACACACAAGTATTTGGTACAAGCAGTGACTGTTATTaGGTAGGGACCAGTGATAAGAGTCACCCTGTCAGGAAGAAATAC | + |
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Preference number: 1 (lower is better) Translates to: FDNHTQVFGTSSDCY*VGTSDKSHPVRKKY Trigger: GTATTTCTTCCTGACAGGGTGACTCTTATCACTGGTCCCTACTCAATAACAGTCACTGCTTGTACCAAATACTTGTGTGTGATTGTCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
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| 3UTR TCA 90 bp | CACACAGTTTATAGCAGGAACTCTATGACTATTTACCAAGAGCTATaGAAGGCTAGTGTGAGCACTTTAATTGGGGAAGGGGTAGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: HTVYSRNSMTIYQEL*KASVSTLIGEGVVC Trigger: ACAAACTACCCCTTCCCCAATTAAAGTGCTCACACTAGCCTTTCATAGCTCTTGGTAAATAGTCATAGAGTTCCTGCTATAAACTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR CCA 90 bp | TCAGAACAGAGACCTGAGACCTTTCACTTATTTTCACATGAAAGATaGCTGACTTCCCATACTGGACAACCAAGAGTGGAATGCAATTAT | + |
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Preference number: 1 (lower is better) Translates to: SEQRPETFHLFSHER*LTSHTGQPRVECNY Trigger: ATAATTGCATTCCACTCTTGGTTGTCCAGTATGGGAAGTCAGCCATCTTTCATGTGAAAATAAGTGAAAGGTCTCAGGTCTCTGTTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGTGCATAGCCTCTTCATTCACCACTGACGCCTTCCAGTCTCCAGCTCCTGCAGTGGGACAGACATaGGCCCCAGGGCCTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: SWCIASSFTTDAFQSPAPAVGQT*APGPME Trigger: TTCCATAGGCCCTGGGGCCCATGTCTGTCCCACTGC...AGGAGCTGGAGACTGGAAGGCGTCAGTGGTGAATGAAGAGGCTATGCACCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGTGCATAGCCTCTTCATTCACCACTGACGCCTTCCAGTCTCCAGCTCCTGGAATGCAGAAGCAGTaGGACAGACATGGGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SWCIASSFTTDAFQSPAPGMQKQ*DRHGPQ Trigger: CTGGGGCCCATGTCTGTCCCACTGCTTCTGCATTCC...AGGAGCTGGAGACTGGAAGGCGTCAGTGGTGAATGAAGAGGCTATGCACCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTCAGTCTTGGTGTCTGTGGGCAGAGCATCCAGTTCTTATCATGACATCTAAGGTCGGGGTGGGTTaGGCAGGGAAGATGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: WAQSWCLWAEHPVLIMTSKVGVG*AGKMEG Trigger: TCCCTCCATCTTCCCTGCCCAACCCACCCCGACCTT...AGATGTCATGATAAGAACTGGATGCTCTGCCCACAGACACCAAGACTGAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTGCCTGGAGTAGTGCTTACCTCCCCTaGTCCTTGTCACCAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: PWELLLLSLSFISLPAWSSAYLP*SLSPGT Trigger: AGTCCCTGGTGACAAGGATCAGGGGAGGTAAGCACT...ACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTTATCTCCCTACCTGCCTGGAGTGTGCTCCTTTGTCTCCTGTAGCCCCCTCCCAACAGCATGTTTaGCTCTGGCTTGTATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VFYLPTCLECAPLSPVAPSQQHV*LWLVCV Trigger: CACACATACAAGCCAGAGGCAAACATGCTGTTGGGA...GGGGGCTACAGGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTTATCTCCCTACCTGCCTGGAGTGTGCTCCTTTGTCTCCTGTAGCCCCCATTTCCTCTGCTCCATaGAAGAGAAAGCCTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VFYLPTCLECAPLSPVAPISSAP*KRKPVL Trigger: CAGCACAGGCTTTCTCTTCCATGGAGCAGAGGAAAT...GGGGGCTACAGGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTTATCTCCCTACCTGCCTGGAGTGTGCTCCTTTGTCTCCTGTAGCCCCCTTGAAGGCTCACGATTaGTTTCCCATTGGTAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VFYLPTCLECAPLSPVAPLKAHD*FPIGKG Trigger: CCCTTTACCAATGGGAAATCAATCGTGAGCCTTCAA...GGGGGCTACAGGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCAGATTATGGGCTTCCAGGGCACTaGGCAGATGTGAAGGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LSPVAPLPGSHLVLIADYGLPGH*ADVKGK Trigger: TTTGCCCTTCACATCTGCTCAGTGCCCTGGAAGCCC...ATAATCTGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAAATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTCTTTCTGAAGTTGCATaGTGGGGCTTGAGGGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: GKCTLFGLPPLGNCFCCPLSEVA*WGLRER Trigger: TCGCTCCCTCAAGCCCCAGCATGCAACTTCAGAAAG...AGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTGGACATTGCCATGTCATTCCAGGAGGCTGAGCTACTAGGGGAACAGGAGCAATCCAGATGCCACTaGATGTCATTGCCAAGATGC | + |
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Preference number: 2 (lower is better) Translates to: ELDIAMSFQEAELLGEQEQSRCH*MSLPRC Trigger: GCATCTTGGCAATGACATCCAGTGGCATCTGGATTG...CTCCTGTTCCCCTAGTAGCTCAGCCTCCTGGAATGACATGGCAATGTCCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGTGCATAGCCTCTTCATTCACCACTGACGCCTTCCAGTCTCCAGCTCCTAGCACTTTTCTTAGGTaGCATCAAACTCCTGACCTG | + |
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Preference number: 2 (lower is better) Translates to: SWCIASSFTTDAFQSPAPSTFLR*HQTPDL Trigger: CAGGTCAGGAGTTTGATGCCACCTAAGAAAAGTGCT...AGGAGCTGGAGACTGGAAGGCGTCAGTGGTGAATGAAGAGGCTATGCACCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR CAA 90 bp | ATGGGCCCCAGGGCCTATGGAAGATGTGGCACCTGGAAGCATCAGTaGAGATCTCTATGTTCATATATGAAGGGCATGGGAAGATCACAG | + |
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Preference number: 2 (lower is better) Translates to: MGPRAYGRCGTWKHQ*RSLCSYMKGMGRSQ Trigger: CTGTGATCTTCCCATGCCCTTCATATATGAACATAGAGATCTCAACTGATGCTTCCAGGTGCCACATCTTCCATAGGCCCTGGGGCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGTAGGGTACTGCTACCACAATCCAGATGCCACTGGATGTCATTGCCAACTCAGACAAGATGGATaGTCCCATCCCAGTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PEVGYCYHNPDATGCHCQLRQDG*SHPSLL Trigger: AAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAG...TTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTTGCCCCAGCAAGAAATaGATGCTCCTGAACCCACAA | + |
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Preference number: 2 (lower is better) Translates to: LASPWELLLLSLSFISLPCPSKK*MLLNPQ Trigger: TTGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCA...AGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGTGCATAGCCTCTTCATTCACCACTGACGCCTTCCAGTCTCCAGCTCCTATCAAACTCCTGACCTaGCTAGAAAATCCTCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SWCIASSFTTDAFQSPAPIKLLT*LENPLK Trigger: CTTGAGAGGATTTTCTAGGCAGGTCAGGAGTTTGAT...AGGAGCTGGAGACTGGAAGGCGTCAGTGGTGAATGAAGAGGCTATGCACCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATATAATATCACATTCTAAGGTGATGGGCTCAGTCTTGGTGTCTGTGGGCTCTAGAAGGTCGGGGTaGGTTGGGCAGGGAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: EDIISHSKVMGSVLVSVGSRRSG*VGQGRW Trigger: CCATCTTCCCTGCCCAACCCACCCCGACCTTCTAGA...GCCCACAGACACCAAGACTGAGCCCATCACCTTAGAATGTGATATTATATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAAATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTTCAGAACAGCTTTCTaGAGTTGCATGCTGGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GKCTLFGLPPLGNCFCCPFRTAF*SCMLGL Trigger: AAGCCCCAGCATGCAACTTCAGAAAGCTGTTCTGAA...AGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGTGCATAGCCTCTTCATTCACCACTGACGCCTTCCAGTCTCCAGCTCCTAAATCCTCTCAAGTTTaGTGCTCCCAGTTAGATGAA | + |
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Preference number: 2 (lower is better) Translates to: SWCIASSFTTDAFQSPAPKSSQV*CSQLDE Trigger: TTCATCTAACTGGGAGCATCAAACTTGAGAGGATTT...AGGAGCTGGAGACTGGAAGGCGTCAGTGGTGAATGAAGAGGCTATGCACCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCGCCTCTGCTTCATAGCACAGACTATTTTGTTGGCCTTGCTGAGCCAGAAGGAAGATGTGGCACCTaGAAGCATCAGTTGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: HAPLLHSTDYFVGLAEPEGRCGT*KHQLRS Trigger: AGATCTCAACTGATGCTTCCAGGTGCCACATCTTCC...TTCTGGCTCAGCAAGGCCAACAAAATAGTCTGTGCTATGAAGCAGAGGCGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCGCCTCTGCTTCATAGCACAGACTATTTTGTTGGCCTTGCTGAGCCAGAAAAAGTGCGGGTATGGTaGTACAGGAGAAAGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: HAPLLHSTDYFVGLAEPEKVRVW*YRRKTG Trigger: TCCTGTCTTTCTCCTGTACCACCATACCCGCACTTT...TTCTGGCTCAGCAAGGCCAACAAAATAGTCTGTGCTATGAAGCAGAGGCGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTCCTTGTCTTTTATCTCCCTACCTGCCTGGAGTGTGCTCCTTTGTCTCCGCAACCTATTTTAAGTaGAGTCACCAGCATCATGAC | + |
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Preference number: 2 (lower is better) Translates to: CCPCLLSPYLPGVCSFVSATYFK*SHQHHD Trigger: GTCATGATGCTGGTGACTTCACTTAAAATAGGTTGC...GGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTTTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCAGAGCACTTAATTTCATaGCCCAGCAAGAAATGCATG | + |
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Preference number: 2 (lower is better) Translates to: APLSPVAPLPGSHLVLIAEHLIS*PSKKCM Trigger: CATGCATTTCTTGCTGGGGCATGAAATTAAGTGCTC...TGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAAAGGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTCAGCATGTTTGCCTCTaGCTTGTATGTGTGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LASPWELLLLSLSFISLPQHVCL*LVCVLL Trigger: CAACAACACACATACAAGCCAGAGGCAAACATGCTG...AGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCGCCTCTGCTTCATAGCACAGACTATTTTGTTGGCCTTGCTGAGCCAGAAGGCCTCCCATATCCATaGGTTCTGTATCAGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: HAPLLHSTDYFVGLAEPEGLPYP*VLYQKI Trigger: AATCTTCTGATACAGAACCCATGGATATGGGAGGCC...TTCTGGCTCAGCAAGGCCAACAAAATAGTCTGTGCTATGAAGCAGAGGCGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCGCCTCTGCTTCATAGCACAGACTATTTTGTTGGCCTTGCTGAGCCAGAATGTACATTAAGTGAATaGGCCTCCCATATCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: HAPLLHSTDYFVGLAEPECTLSE*ASHIHG Trigger: CCCATGGATATGGGAGGCCCATTCACTTAATGTACA...TTCTGGCTCAGCAAGGCCAACAAAATAGTCTGTGCTATGAAGCAGAGGCGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| 3UTR CAA 90 bp | AGAGGTAGGGTACTGCTACCACAATCCAGATGCCACTGGATGTCATaGCCAAGATGCTCATTGAGTGCTTTACCAGAACACATGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: RGRVLLPQSRCHWMS*PRCSLSALPEHMGI Trigger: AATTCCCATGTGTTCTGGTAAAGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
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| 3UTR CAA 90 bp | CTTTGCCACAATACTGAAGGAGACCAAAGTAGGTGTGGTGTGGAGTaGATCTTCACCTGTGTCTTTAAGGAGTTGGAGGATCACACTACC | + |
|
Preference number: 2 (lower is better) Translates to: LCHNTEGDQSRCGVE*IFTCVFKELEDHTT Trigger: GGTAGTGTGATCCTCCAACTCCTTAAAGACACAGGTGAAGATCAACTCCACACCACACCTACTTTGGTCTCCTTCAGTATTGTGGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTTCTGAATTCGAGGTTAGCCTGGTCTACAAAGCAAGTTACAGGAGAGCCAGGCACATGAAAGATGGCTaGCTTCCCATACTGGACAAC | + |
|
Preference number: 2 (lower is better) Translates to: ISEFEVSLVYKASYRRARHMKDG*LPILDN Trigger: GTTGTCCAGTATGGGAAGTCAGCCATCTTTCATGTG...CCTGGCTCTCCTGTAACTTGCTTTGTAGACCAGGCTAACCTCGAATTCAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCGAGGTTAGCCTGGTCTACAAAGCAAGTTACAGGAGAGCCAGGGCTGCATCACTTATTTTCACATaGAAGATGGCTGACTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: EFEVSLVYKASYRRARAASLIFT*KMADFP Trigger: TGGGAAGTCAGCCATCTTTCATGTGAAAATAAGTGA...TGCAGCCCTGGCTCTCCTGTAACTTGCTTTGTAGACCAGGCTAACCTCGAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTGCCTGGAGTATTGCAGATTATCAGTaGTTACCTCCCCTGATCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PWELLLLSLSFISLPAWSIADYQ*LPPLIL Trigger: AAGGATCAGGGGAGGTAAGCACTGATAATCTGCAAT...ACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGATATAATATCACATTCTAAGGTGATGGGCTCAGTCTTGGTGTCTGTGGGCGCAGAAGCTAGAAAGTaGGGGTATGGTGGTACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: EDIISHSKVMGSVLVSVGAEARK*GYGGTG Trigger: TCCTGTACCACCATACCCGCACTTTCTAGCTTCTGC...GCCCACAGACACCAAGACTGAGCCCATCACCTTAGAATGTGATATTATATCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGATTTCAGGATTTCTAGAACCATCTTGGAACATCGAGGGACAACTGTGTTCGGCCTATGGAAGATGTaGCACCTGGAAGCATCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: QDFRISRTILEHRGTTVFGLWKM*HLEASV Trigger: AACTGATGCTTCCAGGTGCCACATCTTCCATAGGCC...GAACACAGTTGTCCCTCGATGTTCCAAGATGGTTCTAGAAATCCTGAAATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAGATATAATATCACATTCTAAGGTGATGGGCTCAGTCTTGGTGTCTGTGGGCTGGGAAGATCACAGATaGACCAAACAGTCCAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: EDIISHSKVMGSVLVSVGWEDHR*TKQSRD Trigger: GTCTCTGGACTGTTTGGTTCATCTGTGATCTTCCCA...GCCCACAGACACCAAGACTGAGCCCATCACCTTAGAATGTGATATTATATCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAATGTTGGCAGGAGAGGGTGTCCAGGGGCATTTAAGAATGGCTAGATTTTGGATTTACCAAGAGCTATaGAAGGCTAGTGTGAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: QMLAGEGVQGHLRMARFWIYQEL*KASVST Trigger: AGTGCTCACACTAGCCTTTCATAGCTCTTGGTAAAT...CCAAAATCTAGCCATTCTTAAATGCCCCTGGACACCCTCTCCTGCCAACATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCGTGTTGTTGTTGCTTTaGATCAGAAAATACGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: NAHYLACLPLGIASAVLVVLLLL*IRKYGD Trigger: GTCTCCGTATTTTCTGATCCAAAGCAACAACAACAC...GACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTCCTTTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCAAGAAAATACGGAGACTaGATTCCTAAACTAGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: APLSPVAPLPGSHLVLIARKYGD*IPKLET Trigger: TGTTTCTAGTTTAGGAATGCAGTCTCCGTATTTTCT...TGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAAAGGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCAGTGTTGATGACACACATCTTTTCTCCCAGCACTCAGAAGGCAGAGACAGTCTGGACAACCAAGAGTaGAATGCAATTATACCATAC | + |
|
Preference number: 2 (lower is better) Translates to: LSVDDTHLFSQHSEGRDSLDNQE*NAIIPY Trigger: GTATGGTATAATTGCATTCCACTCTTGGTTGTCCAG...ACTGTCTCTGCCTTCTGAGTGCTGGGAGAAAAGATGTGTGTCATCAACACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR CAA 90 bp | ATGTATTTCCACGGCTTCATGATACTATCATGCCCAAGCCAACATTaGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: MYFHGFMILSCPSQH*SSGEKTELGEGTGS Trigger: AGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCTTGGGCATGATAGTATCATGAAGCCGTGGAAATACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCTGAATTCGAGGTTAGCCTGGTCTACAAAGCAAGTTACAGGAGAGCCAGGTTTTCACATGAAAGATaGCTGACTTCCCATACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ISEFEVSLVYKASYRRARFSHER*LTSHTG Trigger: TCCAGTATGGGAAGTCAGCCATCTTTCATGTGAAAA...CCTGGCTCTCCTGTAACTTGCTTTGTAGACCAGGCTAACCTCGAATTCAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGATATAATATCACATTCTAAGGTGATGGGCTCAGTCTTGGTGTCTGTGGGCTTTCTAGAACCATCTTaGAACATCGAGGGACAACTG | + |
|
Preference number: 2 (lower is better) Translates to: EDIISHSKVMGSVLVSVGFLEPS*NIEGQL Trigger: CAGTTGTCCCTCGATGTTCCAAGATGGTTCTAGAAA...GCCCACAGACACCAAGACTGAGCCCATCACCTTAGAATGTGATATTATATCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR CAA 90 bp | CCAGGTGCTGGTTGTGATTCCTGGCACGCTAATATATGTTTATTTTaGGTGAAGAAGAATTGGGTGTTAAGAGACAGAAACTGTGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PGAGCDSWHANICLF*VKKNWVLRDRNCEL Trigger: CAGCTCACAGTTTCTGTCTCTTAACACCCAATTCTTCTTCACCAAAAATAAACATATATTAGCGTGCCAGGAATCACAACCAGCACCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCAGATTATAGCAGTTCTTGGGAATaGATGTGCAATACTTTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LSPVAPLPGSHLVLIADYSSSWE*MCNTFC Trigger: ACAAAAAGTATTGCACATTCATTCCCAAGAACTGCT...ATAATCTGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGTTGATCTTCACCTGTGTCTTTAAGGAGTTGGAGGATCACACTACCAAATGTTTTTGTTGGCCTTGCTaGGCCAGAAGATATAATATC | + |
|
Preference number: 2 (lower is better) Translates to: ELIFTCVFKELEDHTTKCFCWPC*ARRYNI Trigger: GATATTATATCTTCTGGCTCAGCAAGGCCAACAAAA...ACATTTGGTAGTGTGATCCTCCAACTCCTTAAAGACACAGGTGAAGATCAACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR GCA 90 bp | CTATCATGCCCAAGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAATGCTTAGTATCTTCCTaGTTTTGCTCATGTAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: LSCPSQHLSSGEKTELGECLVSS*FCSCNP Trigger: AGGGTTACATGAGCAAAAGCAGGAAGATACTAAGCA...TTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCTTGGGCATGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACCACTTTATTTGGGCAATAAAAACCCAGGAAGGTTGCTATGTACACAATGGAAAATGCACACTATTTaGCTTGCCTCCCCTTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KPLYLGNKNPGRLLCTQWKMHTI*LASPWE Trigger: TTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATTTT...CCATTGTGTACATAGCAACCTTCCTGGGTTTTTATTGCCCAAATAAAGTGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACCACTTTATTTGGGCAATAAAAACCCAGGAAGGTTGCTATGTACACAATGGTCACCTTGTTCTCATTaGAGATTATCAGTGCTTACC | + |
|
Preference number: 2 (lower is better) Translates to: KPLYLGNKNPGRLLCTQWSPCSH*RLSVLT Trigger: GGTAAGCACTGATAATCTGCAATGAGAACAAGGTGA...CCATTGTGTACATAGCAACCTTCCTGGGTTTTTATTGCCCAAATAAAGTGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGTGCAATACTTTTTGTTTGGAGGAGCTAGAAATTCAATTAAACTAGCCAGGAAGTCACCAGCATCATaGCTCTGTGACTTTAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: NVQYFLFGGARNSIKLARKSPAS*LCDFKK Trigger: CTTTTTAAAGTCACAGAGTCATGATGCTGGTGACTT...CCTGGCTAGTTTAATTGAATTTCTAGCTCCTCCAAACAAAAAGTATTGCACATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGGTGCATAGCCTCTTCATTCACCACTGACGCCTTCCAGTCTCCAGCTCCTGTGATGGGCTCAGTCTaGGTGTCTGTGGGCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SWCIASSFTTDAFQSPAPVMGSV*VSVGRA Trigger: TGCTCTGCCCACAGACACCAAGACTGAGCCCATCAC...AGGAGCTGGAGACTGGAAGGCGTCAGTGGTGAATGAAGAGGCTATGCACCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR CCA 72 bp | CAGAAGCAGTGGGACAGACATGGGCCCCAGGGCCTATaGAAGATGTGGCACCTGGAAGCATCAGTTGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: QKQWDRHGPQGL*KMWHLEASVEI Trigger: GATCTCAACTGATGCTTCCAGGTGCCACATCTTCCATAGGCCCTGGGGCCCATGTCTGTCCCACTGCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGATTTCAGGATTTCTAGAACCATCTTGGAACATCGAGGGACAACTGTGTTCGAAGGTCGGGGTGGGTaGGGCAGGGAAGATGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QDFRISRTILEHRGTTVFEGRGG*GREDGG Trigger: CCCTCCATCTTCCCTGCCCAACCCACCCCGACCTTC...GAACACAGTTGTCCCTCGATGTTCCAAGATGGTTCTAGAAATCCTGAAATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGGTGCATAGCCTCTTCATTCACCACTGACGCCTTCCAGTCTCCAGCTCCTGCACAGACTATTTTGTaGGCCTTGCTGAGCCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SWCIASSFTTDAFQSPAPAQTIL*ALLSQK Trigger: CTTCTGGCTCAGCAAGGCCAACAAAATAGTCTGTGC...AGGAGCTGGAGACTGGAAGGCGTCAGTGGTGAATGAAGAGGCTATGCACCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR TCA 72 bp | TATAGAGTTGGACATTGCCATGTCATTCCAGGAGGCTaGGCTACTAGGGGAACAGGAGATGAGGCCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: YRVGHCHVIPGG*ATRGTGDEAQR Trigger: CCTCTGGGCCTCATCTCCTGTTCCCCTAGTAGCTCAGCCTCCTGGAATGACATGGCAATGTCCAACTCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR TCA 72 bp | CTCAAACACAAAGACTGTTTAACTGGAGTTGTGTGCTaGAGGCCCTATCTCCCTGGAGCCTCCCTCCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LKHKDCLTGVVC*RPYLPGASLPL Trigger: GAGAGGGAGGGAGGCTCCAGGGAGATAGGGCCTTCAGCACACAACTCCAGTTAAACAGTCTTTGTGTTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR GCA 72 bp | ATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTaGCTGGAGTGTGCTCCTTTGTCTCCTGTAGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: IASAVLVFYLPT*LECAPLSPVAP Trigger: GGGGGCTACAGGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR CCA 72 bp | CAGCACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATaGATGCTCCCATCCCAGTCTTCTTTCCTCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QHFQWLFSPQTR*MLPSQSSFLLG Trigger: TCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR GCA 72 bp | AGGCCCAGAGGTAGGGTACTGCTACCACAATCCAGATaGCACTGGATGTCATTGCCAAGATGCTCATTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: RPRGRVLLPQSR*HWMSLPRCSLS Trigger: ACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCTGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR CCA 72 bp | GAGGGTGTCCAGGGGCATTTAAGAATGGCTAGATTTTaGGAAGCCATGCGCCTCTGCTTCATAGCACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: EGVQGHLRMARF*EAMRLCFIAQT Trigger: AGTCTGTGCTATGAAGCAGAGGCGCATGGCTTCCCAAAATCTAGCCATTCTTAAATGCCCCTGGACACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACCACAATCCAGATGCCACTGGATGTCATTGCCAAGATGCTCATTGAGTGCTCAGCACTTCCAGTGGTaGTTCAGCCCTCAGACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPQSRCHWMSLPRCSLSAQHFQW*FSPQTR Trigger: TCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTG...AGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTCTGAAAACCCCTGTCTaGGAAACCAGGAAAGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GKCTLFGLPPLGNCFCCPLKTPV*ETRKEH Trigger: GTGCTCTTTCCTGGTTTCCAAGACAGGGGTTTTCAG...AGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTTTATCTCCCTACCTGCCTGGAGTGTGCTCCTTTGTCTCCTGTAGCCCCCTACCTGGTAGTCACCTaGTTCTCATTGCAGATTATC | + |
|
Preference number: 3 (lower is better) Translates to: VFYLPTCLECAPLSPVAPYLVVT*FSLQII Trigger: GATAATCTGCAATGAGAACAAGGTGACTACCAGGTA...GGGGGCTACAGGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR GCA 72 bp | ACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATaGTCCCATCCCAGTCTTCTTTCCTCCTTGGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: TSSGCSALRQDG*SHPSLLSSLDL Trigger: TAGATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR GCA 72 bp | ACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTaGTGTCCTTGTCTTTTATCTCCCTACCTGCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TLFGLPPLGNCF*CPCLLSPYLPG Trigger: TCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR CCA 72 bp | GGCAGAGACAGTGAATTTCTGAATTCGAGGTTAGCCTaGTCTACAAAGCAAGTTACAGGAGAGCCAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GRDSEFLNSRLA*STKQVTGEPGL Trigger: CAGCCCTGGCTCTCCTGTAACTTGCTTTGTAGACCAGGCTAACCTCGAATTCAGAAATTCACTGTCTCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR CCA 72 bp | GACATGGGCCCCAGGGCCTATGGAAGATGTGGCACCTaGAAGCATCAGTTGAGATCTCTATGTTCATATATG | + |
|
Preference number: 3 (lower is better) Translates to: DMGPRAYGRCGT*KHQLRSLCSYM Trigger: CATATATGAACATAGAGATCTCAACTGATGCTTCCAGGTGCCACATCTTCCATAGGCCCTGGGGCCCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR TCA 72 bp | CCAGATGCCACTGGATGTCATTGCCAAGATGCTCATTaGGTGCTTTACCAGAACACATGGGAATTCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PDATGCHCQDAH*VLYQNTWEFPA Trigger: TGCTGGGAATTCCCATGTGTTCTGGTAAAGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR TCA 72 bp | GGATTTCCTCTGCTCCATGGAAGAGAAAGCCTGTGCTaGCCTGATTCCATTTGCACATTCTGTTCAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GFPLLHGRESLC*PDSICTFCSAL Trigger: CAAGGCTGAACAGAATGTGCAAATGGAATCAGGTCAGCACAGGCTTTCTCTTCCATGGAGCAGAGGAAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR TCA 72 bp | TTTCAGAACAGCTTTCTGAAGTTGCATGCTGGGGCTTaGGGGAGCGAGAGAGCTTATAGACACAATGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FQNSFLKLHAGA*GSERAYRHNAH Trigger: ATGGGCATTGTGTCTATAAGCTCTCTCGCTCCCTCAAGCCCCAGCATGCAACTTCAGAAAGCTGTTCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR TCA 72 bp | TTGTTCTCATTGCAGATTATCAGTGCTTACCTCCCCTaGTCCTTGTCACCAGGGACTGCAGACCTTAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LFSLQIISAYLP*SLSPGTADLNH Trigger: GTGGTTAAGGTCTGCAGTCCCTGGTGACAAGGATCAGGGGAGGTAAGCACTGATAATCTGCAATGAGAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR TCA 72 bp | CTTGGTGTCTGTGGGCAGAGCATCCAGTTCTTATCATaGCATCTCCAAGGCTCTAGGAAGTCTGAAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: LGVCGQSIQFLS*HLQGSRKSETL Trigger: CAGTGTTTCAGACTTCCTAGAGCCTTGGAGATGTCATGATAAGAACTGGATGCTCTGCCCACAGACACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGGCTTGTATGTGTGTaGTTGTTGCTTTGGATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GKCTLFGLPPLGNCFCCPWLVCV*LLLWIR Trigger: TCTGATCCAAAGCAACAACAACACACATACAAGCCA...AGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCGAGGTTAGCCTGGTCTACAAAGCAAGTTACAGGAGAGCCAGGGCTGCAATTTCCCCCAATTTTTaGCCTATGAGGCACTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: EFEVSLVYKASYRRARAAISPNF*PMRHSF Trigger: AAAAGAGTGCCTCATAGGCAAAAAATTGGGGGAAAT...TGCAGCCCTGGCTCTCCTGTAACTTGCTTTGTAGACCAGGCTAACCTCGAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR TCA 72 bp | CATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTaGACATCAGTGAAAAGAATGGTCTGGCAGGAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: HGAKLLRHQSTS*TSVKRMVWQEY Trigger: ATACTCCTGCCAGACCATTCTTTTCACTGATGTTCACGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR TCA 72 bp | AGGAACCAGGTTAAATCATCCTTGAATGTACCAAGCTaGCTTGTGCTTCCCTGGTATAGTTCCAGGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RNQVKSSLNVPS*LVLPWYSSRLL Trigger: GAGGAGCCTGGAACTATACCAGGGAAGCACAAGTCAGCTTGGTACATTCAAGGATGATTTAACCTGGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR GCA 72 bp | ATGCCACTGGATGTCATTGCCAAGATGCTCATTGAGTaGTTTACCAGAACACATGGGAATTCCCAGCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: MPLDVIAKMLIE*FTRTHGNSQHF Trigger: GAAGTGCTGGGAATTCCCATGTGTTCTGGTAAAGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR GCA 72 bp | AAATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTaGTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: KCTLFGLPPLGN*FCCPCLLSPYL Trigger: CAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR CCA 72 bp | AGAGGTAGGGTACTGCTACCACAATCCAGATGCCACTaGATGTCATTGCCAAGATGCTCATTGAGTGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RGRVLLPQSRCH*MSLPRCSLSAL Trigger: TAAAGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR CCA 72 bp | AAAGGCACTTTAAGCTTCAGGAAAATGCACACTATTTaGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KGTLSFRKMHTI*LASPWELLLLS Trigger: GGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATTTTCCTGAAGCTTAAAGTGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR CCA 72 bp | CAGTTTATCAAAAGCAATAGATCTAGAAGGTCGGGGTaGGTTGGGCAGGGAAGATGGAGGGACAGAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QFIKSNRSRRSG*VGQGRWRDRRK Trigger: TTTTCTTCTGTCCCTCCATCTTCCCTGCCCAACCCACCCCGACCTTCTAGATCTATTGCTTTTGATAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTGTGTTGTTGTTGCTTaGGATCAGAAAATACGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: NAHYLACLPLGIASAVLVCVVVA*DQKIRR Trigger: TCTCCGTATTTTCTGATCCAAAGCAACAACAACACA...GACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCTCAGTCTTGGTGTCTGTGGGCAGAGCATCCAGTTCTTATCATGACATCTACCTGGAAGCATCAGTaGAGATCTCTATGTTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: WAQSWCLWAEHPVLIMTSTWKHQ*RSLCSY Trigger: ATATGAACATAGAGATCTCAACTGATGCTTCCAGGT...AGATGTCATGATAAGAACTGGATGCTCTGCCCACAGACACCAAGACTGAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR GCA 72 bp | TCAAAACTTCTGCCCCATTGTTCCCAACAGCATGTTTaGCTCTGGCTTGTATGTGTGTTGTTGTTGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SKLLPHCSQQHV*LWLVCVLLLLW Trigger: CCAAAGCAACAACAACACACATACAAGCCAGAGGCAAACATGCTGTTGGGAACAATGGGGCAGAAGTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR GCA 72 bp | TTAAGAATGGCTAGATTTTGGGAAGCCATGCGCCTCTaGTTCATAGCACAGACTATTTTGTTGGCCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRMARFWEAMRL*FIAQTILLALL Trigger: CAGCAAGGCCAACAAAATAGTCTGTGCTATGAAGCAGAGGCGCATGGCTTCCCAAAATCTAGCCATTCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTGCCTGGAGTGTATGTGTGTTGTTGTaGCTTTGGATCAGAAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: PWELLLLSLSFISLPAWSVCVLL*LWIRKY Trigger: GTATTTTCTGATCCAAAGCAACAACAACACACATAC...ACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTCTTGTATGTGTGTTGTaGTTGCTTTGGATCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LASPWELLLLSLSFISLPLVCVL*LLWIRK Trigger: TTTTCTGATCCAAAGCAACAACAACACACATACAAG...AGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTGATCTTCACCTGTGTCTTTAAGGAGTTGGAGGATCACACTACCAAATGTATAGCACAGACTATTTaGTTGGCCTTGCTGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ELIFTCVFKELEDHTTKCIAQTI*LALLSQ Trigger: CTGGCTCAGCAAGGCCAACAAAATAGTCTGTGCTAT...ACATTTGGTAGTGTGATCCTCCAACTCCTTAAAGACACAGGTGAAGATCAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR TCA 72 bp | ACATCTTTTCTCCCAGCACTCAGAAGGCAGAGACAGTaGATTTCTGAATTCGAGGTTAGCCTGGTCTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSFLPALRRQRQ*ISEFEVSLVYK Trigger: TTTGTAGACCAGGCTAACCTCGAATTCAGAAATTCACTGTCTCTGCCTTCTGAGTGCTGGGAGAAAAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR TCA 72 bp | CACTTTAATTGGGGAAGGGGTAGTTTGTACATTAAGTaGATGGGCCTCCCATATCCATGGGTTCTGTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: HFNWGRGSLYIK*MGLPYPWVLYQ Trigger: CTGATACAGAACCCATGGATATGGGAGGCCCATTCACTTAATGTACAAACTACCCCTTCCCCAATTAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR TCA 72 bp | GGACCTCTTAAGTTCAGAAAAGTAACAGAGGATCACTaGAACCTCAGTAGACTGGGTTCTAACTCATGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GPLKFRKVTEDH*NLSRLGSNSCH Trigger: GTGGCATGAGTTAGAACCCAGTCTACTGAGGTTTCAGTGATCCTCTGTTACTTTTCTGAACTTAAGAGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR TCA 72 bp | ATTGAAATATTCTGTGCCCATCACCTAGTATTGGTCTaGAGCAGCTCTCATGTGGATTGTTCCACCAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: IEIFCAHHLVLV*SSSHVDCSTNL Trigger: GAGGTTGGTGGAACAATCCACATGAGAGCTGCTTCAGACCAATACTAGGTGATGGGCACAGAATATTTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR GCA 72 bp | GCTCCCATGTATTTCCACGGCTTCATGATACTATCATaGCCAAGCCAACATTTGAGTAGTGGAGAAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: APMYFHGFMILS*PSQHLSSGEKT Trigger: TGTCTTTTCTCCACTACTCAAATGTTGGCTTGGGCATGATAGTATCATGAAGCCGTGGAAATACATGGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| 3UTR CCA 72 bp | TTAATTGGGGAAGGGGTAGTTTGTACATTAAGTGAATaGGCCTCCCATATCCATGGGTTCTGTATCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LIGEGVVCTLSE*ASHIHGFCIRR Trigger: TCTTCTGATACAGAACCCATGGATATGGGAGGCCCATTCACTTAATGTACAAACTACCCCTTCCCCAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR TCA 72 bp | TATAGCAGGAACTCTATGACTATTTACCAAGAGCTATaGAAGGCTAGTGTGAGCACTTTAATTGGGGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: YSRNSMTIYQEL*KASVSTLIGEG Trigger: CCCTTCCCCAATTAAAGTGCTCACACTAGCCTTTCATAGCTCTTGGTAAATAGTCATAGAGTTCCTGCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR-3UTR CAA 90 bp | TACATTGGGAGAGGTTCTCTCAAAGTGACACAACTTAAATCCAGTTTTATCAGTTGGGGCATCTCAGTGTaGATGACACACATCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YIGRGSLKVTQLKSSFISWGISV*MTHIFS Trigger: AGAAAAGATGTGTGTCATCAACACTGAGATGCCCCA...ACTGATAAAACTGGATTTAAGTTGTGTCACTTTGAGAGAACCTCTCCCAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR CCA 72 bp | GGCAATAAAAACCCAGGAAGGTTGCTATGTACACAATaGGACACTCATAGCAAACTGACATATGTTTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GNKNPGRLLCTQ*DTHSKLTYVSL Trigger: CAAAGAAACATATGTCAGTTTGCTATGAGTGTCCCATTGTGTACATAGCAACCTTCCTGGGTTTTTATTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR GCA 72 bp | CATGCCAATAGAAAGGTGGAAGAACCCATAATTGGATaGCAGAAATTAATAACAAACCAGCTACAGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: HANRKVEEPIIG*QKLITNQLQHL Trigger: AAGATGCTGTAGCTGGTTTGTTATTAATTTCTGGCATCCAATTATGGGTTCTTCCACCTTTCTATTGGCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR CCA 72 bp | CACGCTAATATATGTTTATTTTTGGTGAAGAAGAATTaGGTGTTAAGAGACAGAAACTGTGAGCTGAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HANICLFLVKKN*VLRDRNCELRK Trigger: CTTCCTCAGCTCACAGTTTCTGTCTCTTAACACCCAATTCTTCTTCACCAAAAATAAACATATATTAGCGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR TCA 72 bp | GAGGTGTTTAATACATTGGGAGAGGTTCTCTCAAAGTaGCACAACTTAAATCCAGTTTTATCAGTTATCATG | + |
|
Preference number: 3 (lower is better) Translates to: EVFNTLGEVLSK*HNLNPVLSVIM Trigger: CATGATAACTGATAAAACTGGATTTAAGTTGTGTCACTTTGAGAGAACCTCTCCCAATGTATTAAACACCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGGTGGGATGGGCCCATaGAGAGGGATCCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSGGMGP*RGIQPV Trigger: CACTGGCTGGATCCCTCTCCATGGGCCCATCCCACC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGGGACAGACATGGGCCCCAGGGCCTATGGAAGATGTGGCACCTGGAAGTCCTTGGCACACAAATaGAGATGGCGTTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGTDMGPRAYGRCGTWKSLAHK*RWRFPW Trigger: CCAGGGGAAACGCCATCTTCATTTGTGTGCCAAGGA...CTTCCAGGTGCCACATCTTCCATAGGCCCTGGGGCCCATGTCTGTCCCACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR TCA 90 bp | GCTCCTTTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCAGGAGACGTTGCTGGTTaGGCCCCTTGGGGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: APLSPVAPLPGSHLVLIAGDVAG*APWGWV Trigger: CACCCACCCCCAAGGGGCTCAACCAGCAACGTCTCC...TGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAAAGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR TCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGAGGGATCCAGCCAGTaGCGATTCAGGTCAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSEGSSQ*RFRSNP Trigger: GGGGTTTGACCTGAATCGTCACTGGCTGGATCCCTC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGCGCCGGCCAGTTCCTaGTTTCACAGCATCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSAPASS*FHSIPV Trigger: AACAGGGATGCTGTGAAAGCAGGAACTGGCCGGCGC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR GCA 90 bp | AGCTGGTGCATAGCCTCTTCATTCACCACTGACGCCTTCCAGTCTCCAGCTCCTGCGCCGGCCAGTTCCTaGTTTCACAGCATCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SWCIASSFTTDAFQSPAPAPASS*FHSIPV Trigger: AACAGGGATGCTGTGAAAGCAGGAACTGGCCGGCGC...AGGAGCTGGAGACTGGAAGGCGTCAGTGGTGAATGAAGAGGCTATGCACCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGGCGTTTCCCCTGGGTaGACTCGCCCTGTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSGVSPG*TRPVMN Trigger: ATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCCTTGTCTTTTATCTCCCTACCTGCCTGGAGTGTGCTCCTTTGTCTCCGGTGGGATGGGCCCATaGAGAGGGATCCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CCPCLLSPYLPGVCSFVSGGMGP*RGIQPV Trigger: CACTGGCTGGATCCCTCTCCATGGGCCCATCCCACC...GGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTGAGGGATCCAGCCAGTaGCGATTCAGGTCAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: HFQWLFSPQTRWMLPSQSEGSSQ*RFRSNP Trigger: GGGGTTTGACCTGAATCGTCACTGGCTGGATCCCTC...AGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTCCTGTATCATTGCCTaGCTCTGGCGCTGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSCIIA*LWRCLA Trigger: AGCCAGACAGCGCCAGAGGCAGGCAATGATACAGGA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTTTATCTCCCTACCTGCCTGGAGTGTGCTCCTTTGTCTCCTGTAGCCCCCTCCTGTATCATTGCCTaGCTCTGGCGCTGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFYLPTCLECAPLSPVAPSCIIA*LWRCLA Trigger: AGCCAGACAGCGCCAGAGGCAGGCAATGATACAGGA...GGGGGCTACAGGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGTCAGGAGGTCAAGCTaGCGCTGTTGCACACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSVRRSS*RCCTLC Trigger: ACAGAGTGTGCAACAGCGGCAGCTTGACCTCCTGAC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | TGGGCTCAGTCTTGGTGTCTGTGGGCAGAGCATCCAGTTCTTATCATGACATCTGGTGGGATGGGCCCATaGAGAGGGATCCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WAQSWCLWAEHPVLIMTSGGMGP*RGIQPV Trigger: CACTGGCTGGATCCCTCTCCATGGGCCCATCCCACC...AGATGTCATGATAAGAACTGGATGCTCTGCCCACAGACACCAAGACTGAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGGGACAGACATGGGCCCCAGGGCCTATGGAAGATGTGGCACCTGGAAGAGCCATTCATCATGGTaGAGTGAGCGTGGATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSGTDMGPRAYGRCGTWKSHSSW*SERGCQ Trigger: TTGACATCCACGCTCACTCCACCATGATGAATGGCT...CTTCCAGGTGCCACATCTTCCATAGGCCCTGGGGCCCATGTCTGTCCCACTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTCCTTGGCACACAAATaGAGATGGCGTTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSLAHK*RWRFPW Trigger: CCAGGGGAAACGCCATCTTCATTTGTGTGCCAAGGA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR TCA 90 bp | GACATGGGCCCCAGGGCCTATGGAAGATGTGGCACCTGGAAGCATCAGTTGAGACGGGCAATTGGATGCTaGCTTACAAGGAAGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: DMGPRAYGRCGTWKHQLRRAIGC*LTRKSM Trigger: CATCGACTTCCTTGTAAGTCAGCATCCAATTGCCCG...TCTCAACTGATGCTTCCAGGTGCCACATCTTCCATAGGCCCTGGGGCCCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTCAAGCTGCCGCTGTTaGACACTCTGTCCAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSSCRC*TLCPSC Trigger: ACAGCTTGGACAGAGTGTGCAACAGCGGCAGCTTGA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR GCA 90 bp | CCCATCCCAGTCTTCTTTCCTCCTTGGATCTACAAGTGGGTCCATCAGAGGAGTGCGCCGGCCAGTTCCTaGTTTCACAGCATCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIPVFFPPWIYKWVHQRSAPASS*FHSIPV Trigger: AACAGGGATGCTGTGAAAGCAGGAACTGGCCGGCGC...ACTCCTCTGATGGACCCACTTGTAGATCCAAGGAGGAAAGAAGACTGGGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | CCAGCACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGGAGATTCTCCGGGCTaGTTATCGTCAGGAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PALPVVVQPSDKMDAPIPGDSPG*LSSGGQ Trigger: TTGACCTCCTGACGATAACCAGCCCGGAGAATCTCC...TGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGGAGATTCTCCGGGCTaGTTATCGTCAGGAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSGDSPG*LSSGGQ Trigger: TTGACCTCCTGACGATAACCAGCCCGGAGAATCTCC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCCCAGTCTTCTTTCCTCCTTGGATCTACAAGTGGGTCCATCAGAGGAGTGGCGTTTCCCCTGGGTaGACTCGCCCTGTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PIPVFFPPWIYKWVHQRSGVSPG*TRPVMN Trigger: ATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCC...ACTCCTCTGATGGACCCACTTGTAGATCCAAGGAGGAAAGAAGACTGGGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGAGCCCTCAGACAAGATaGATGCTCCCATCCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSPQTR*MLPSQS Trigger: AGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCT...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| 3UTR CAA 72 bp | AAGTCTGAAACACTGACCTACCACCTGGATTACTCCTaGCTCGCCCCTGCTCTGAGGCTATCACCTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KSETLTYHLDYS*LAPALRLSPGP Trigger: AGGTCCAGGTGATAGCCTCAGAGCAGGGGCGAGCAAGGAGTAATCCAGGTGGTAGGTCAGTGTTTCAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGCGGGCAATTGGATGCTaGCTTACAAGGAAGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSRAIGC*LTRKSM Trigger: CATCGACTTCCTTGTAAGTCAGCATCCAATTGCCCG...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR TCA 90 bp | CCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTGCCTGGAGTGAGGGATCCAGCCAGTaGCGATTCAGGTCAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PWELLLLSLSFISLPAWSEGSSQ*RFRSNP Trigger: GGGGTTTGACCTGAATCGTCACTGGCTGGATCCCTC...ACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGTAGGGTACTGCTACCACAATCCAGATGCCACTGGATGTCATTGCCAATCCTGTATCATTGCCTaGCTCTGGCGCTGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PEVGYCYHNPDATGCHCQSCIIA*LWRCLA Trigger: AGCCAGACAGCGCCAGAGGCAGGCAATGATACAGGA...TTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGCATTTCCTGTATCATTaGCTGCCTCTGGCGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSHFLYH*LPLALS Trigger: AGACAGCGCCAGAGGCAGGCAATGATACAGGAAATG...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTGTCAGGAGGTCAAGCTaGCGCTGTTGCACACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVVVQPSDKMDAPIPVFFVRRSS*RCCTLC Trigger: ACAGAGTGTGCAACAGCGGCAGCTTGACCTCCTGAC...AAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTGCGCCGGCCAGTTCCTaGTTTCACAGCATCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LASPWELLLLSLSFISLPAPASS*FHSIPV Trigger: AACAGGGATGCTGTGAAAGCAGGAACTGGCCGGCGC...AGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR CAA 72 bp | ACCAGAACACATGGGAATTCCCAGCACTTCCAGTGGTaGTTCAGCCCTCAGACAAGATGGATGCTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TRTHGNSQHFQW*FSPQTRWMLPS Trigger: GGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTGGGAATTCCCATGTGTTCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR CAA 72 bp | GTCTTTTATCTCCCTACCTGCCTGGAGTGTGCTCCTTaGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFYLPTCLECAP*SPVAPLPGSHL Trigger: AAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTCCTTGGCACACAAATaGAGATGGCGTTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGCSALRQDGCSHPSLLSLAHK*RWRFPW Trigger: CCAGGGGAAACGCCATCTTCATTTGTGTGCCAAGGA...AAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR TCA 90 bp | GCTCCTTTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCATCCTTGGCACACAAATaGAGATGGCGTTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: APLSPVAPLPGSHLVLIASLAHK*RWRFPW Trigger: CCAGGGGAAACGCCATCTTCATTTGTGTGCCAAGGA...TGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAAAGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTGGACATTGCCATGTCATTCCAGGAGGCTGAGCTACTAGGGGAACAGGAGCGGGCAATTGGATGCTaGCTTACAAGGAAGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELDIAMSFQEAELLGEQERAIGC*LTRKSM Trigger: CATCGACTTCCTTGTAAGTCAGCATCCAATTGCCCG...CTCCTGTTCCCCTAGTAGCTCAGCCTCCTGGAATGACATGGCAATGTCCAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGCTCAGACAAGATGGATaGTCCCATCCCAGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSLRQDG*SHPSLL Trigger: AAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAG...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGGTAGATTTCACCATTaGTGCCATCCCATCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PALPVVVQPSDKMDAPIPGRFHH*CHPISV Trigger: TACCGAGATGGGATGGCACCAATGGTGAAATCTACC...TGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGGTAGATTTCACCATTaGTGCCATCCCATCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSGRFHH*CHPISV Trigger: TACCGAGATGGGATGGCACCAATGGTGAAATCTACC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTATCTCCCTACCTGCCTGGAGTGTGCTCCTTTGTCTCCTGTAGCCCCCGGTAGATTTCACCATTaGTGCCATCCCATCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VFYLPTCLECAPLSPVAPGRFHH*CHPISV Trigger: TACCGAGATGGGATGGCACCAATGGTGAAATCTACC...GGGGGCTACAGGAGACAAAGGAGCACACTCCAGGCAGGTAGGGAGATAAAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | CAAATGTTGGCAGGAGAGGGTGTCCAGGGGCATTTAAGAATGGCTAGATTTTGGGGCGTTTCCCCTGGGTaGACTCGCCCTGTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QMLAGEGVQGHLRMARFWGVSPG*TRPVMN Trigger: ATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCC...CCAAAATCTAGCCATTCTTAAATGCCCCTGGACACCCTCTCCTGCCAACATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR CCA 90 bp | AGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTGGTGGGATGGGCCCATaGAGAGGGATCCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQHLSSGEKTELGEGTGSGGMGP*RGIQPV Trigger: CACTGGCTGGATCCCTCTCCATGGGCCCATCCCACC...AGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGGGACAGACATGGGCCCCAGGGCCTATGGAAGATGTGGCACCTGGAAGCTCCAGGCTTGTTTTTaGGTCATTGTACATCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTDMGPRAYGRCGTWKLQACF*VIVHLD Trigger: ATCAAGATGTACAATGACCCAAAAACAAGCCTGGAG...CTTCCAGGTGCCACATCTTCCATAGGCCCTGGGGCCCATGTCTGTCCCACTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGAGCCATTCATCATGGTaGAGTGAGCGTGGATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSHSSW*SERGCQ Trigger: TTGACATCCACGCTCACTCCACCATGATGAATGGCT...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGTCTTCTTTCCTCCTTaGATCGAAGTCTTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSVFFPP*IEVLAW Trigger: CCATGCCAAGACTTCGATCCAAGGAGGAAAGAAGAC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGCAATCCAGATGCCACTaGATGTCATTGCCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSQSRCH*MSLPRC Trigger: GCATCTTGGCAATGACATCCAGTGGCATCTGGATTG...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS-3UTR TCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTATCACCTTCTTTTCTaGCCCTTCACGGAGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSYHLLF*PFTEIL Trigger: GAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTGATA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR TCA 90 bp | GAGATGAGGCCCAGAGGTAGGGTACTGCTACCACAATCCAGATGCCACTGGATGAGATATTGCCGTACATaGAGCCATTCATCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EMRPRGRVLLPQSRCHWMRYCRT*SHSSWW Trigger: CCACCATGATGAATGGCTTCATGTACGGCAATATCT...CATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCTGGGCCTCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR TCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGAGATATTGCCGTACATaGAGCCATTCATCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSRYCRT*SHSSWW Trigger: CCACCATGATGAATGGCTTCATGTACGGCAATATCT...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR TCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTGCCAAGATGCTCATTaGGTGCTTTACCAGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSCQDAH*VLYQNT Trigger: TGTGTTCTGGTAAAGCACTCAATGAGCATCTTGGCA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGTGTTGATGACACACATCTTTTCTCCCAGCACTCAGAAGGCAGAGACAGTTCCTGTATCATTGCCTaGCTCTGGCGCTGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVDDTHLFSQHSEGRDSSCIIA*LWRCLA Trigger: AGCCAGACAGCGCCAGAGGCAGGCAATGATACAGGA...ACTGTCTCTGCCTTCTGAGTGCTGGGAGAAAAGATGTGTGTCATCAACACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTGCCTGGAGTTCAAGCTGCCGCTGTTaGACACTCTGTCCAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PWELLLLSLSFISLPAWSSSCRC*TLCPSC Trigger: ACAGCTTGGACAGAGTGTGCAACAGCGGCAGCTTGA...ACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTATAGAGTTGGACATTaGCATGTCATTCCAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSYRVGH*HVIPGG Trigger: GCCTCCTGGAATGACATGGCAATGTCCAACTCTATA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | CATGCGCCTCTGCTTCATAGCACAGACTATTTTGTTGGCCTTGCTGAGCCAGAAGGAGATTCTCCGGGCTaGTTATCGTCAGGAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HAPLLHSTDYFVGLAEPEGDSPG*LSSGGQ Trigger: TTGACCTCCTGACGATAACCAGCCCGGAGAATCTCC...TTCTGGCTCAGCAAGGCCAACAAAATAGTCTGTGCTATGAAGCAGAGGCGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGAAAATGGACTGCCTTTaGAACCGTTCCTCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSKMDCL*NRSSSS Trigger: TGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTT...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGCTTTACCAGAACACATaGGAATTCCCAGCACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSLYQNT*EFPALP Trigger: TGGAAGTGCTGGGAATTCCCATGTGTTCTGGTAAAG...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGCACTTAATTTCATGCCCCAGCAAGAAATGCATGCTCCTGAACCCACACAATGGAGACGTTGCTaGTTGAGCCCCTTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERALNFMPQQEMHAPEPTQWRRC*LSPLGV Trigger: CACCCCCAAGGGGCTCAACCAGCAACGTCTCCATTG...TGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCATGAAATTAAGTGCTCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTATCACCTTCTTTTCTaGCCCTTCACGGAGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HFQWLFSPQTRWMLPSQSYHLLF*PFTEIL Trigger: GAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTGATA...AGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR TCA 90 bp | AGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTGAGGGATCCAGCCAGTaGCGATTCAGGTCAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQHLSSGEKTELGEGTGSEGSSQ*RFRSNP Trigger: GGGGTTTGACCTGAATCGTCACTGGCTGGATCCCTC...AGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR TCA 90 bp | GAAGATATAATATCACATTCTAAGGTGATGGGCTCAGTCTTGGTGTCTGTGGGCGAGGGATCCAGCCAGTaGCGATTCAGGTCAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: EDIISHSKVMGSVLVSVGEGSSQ*RFRSNP Trigger: GGGGTTTGACCTGAATCGTCACTGGCTGGATCCCTC...GCCCACAGACACCAAGACTGAGCCCATCACCTTAGAATGTGATATTATATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR TCA 90 bp | AGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTGCAGCCAGTAGCTGCTaGGGACATCCTGCTACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQHLSSGEKTELGEGTGSAASSC*GHPATH Trigger: GTGAGTAGCAGGATGTCCTCAGCAGCTACTGGCTGC...AGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTTTGGTGGTAGTCTTTaGCATTTTGGTCTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSFGGSL*HFGLLV Trigger: TACCAGCAGACCAAAATGGCAAAGACTACCACCAAA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR GCA 90 bp | CTACCACAATCCAGATGCCACTGGATGTCATTGCCAAGATGCTCATTGAGTGCTTCAAGCTGCCGCTGTTaGACACTCTGTCCAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPQSRCHWMSLPRCSLSASSCRC*TLCPSC Trigger: ACAGCTTGGACAGAGTGTGCAACAGCGGCAGCTTGA...AGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTTTGGAAAAATGGACTaGCTTTGGAACCGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSFGKMD*LWNRSS Trigger: TGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | CACTTAATTTCATGCCCCAGCAAGAAATGCATGCTCCTGAACCCACAATGCCTCGGAGATTCTCCGGGCTaGTTATCGTCAGGAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLISCPSKKCMLLNPQCLGDSPG*LSSGGQ Trigger: TTGACCTCCTGACGATAACCAGCCCGGAGAATCTCC...GAGGCATTGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCATGAAATTAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTGGCGTTTCCCCTGGGTaGACTCGCCCTGTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQHLSSGEKTELGEGTGSGVSPG*TRPVMN Trigger: ATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCC...AGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGCACTTAATTTCATGCCCCAGCAAGAAATGCATGCTCCTGAACCCACAAGGCGTTTCCCCTGGGTaGACTCGCCCTGTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KEHLISCPSKKCMLLNPQGVSPG*TRPVMN Trigger: ATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCC...TTGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCATGAAATTAAGTGCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGAAGTCGATGATTCCTTaGCACACAAATGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSKSMIP*HTNEDG Trigger: GCCATCTTCATTTGTGTGCCAAGGAATCATCGACTT...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCCCAGTCTTCTTTCCTCCTTGGATCTACAAGTGGGTCCATCAGAGGAGTAGCCATTCATCATGGTaGAGTGAGCGTGGATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PIPVFFPPWIYKWVHQRSSHSSW*SERGCQ Trigger: TTGACATCCACGCTCACTCCACCATGATGAATGGCT...ACTCCTCTGATGGACCCACTTGTAGATCCAAGGAGGAAAGAAGACTGGGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGGAGTTTTGGAAAAATaGACTGCCTTTGGAACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSGVLEK*TAFGTV Trigger: AACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | GAGATGAGGCCCAGAGGTAGGGTACTGCTACCACAATCCAGATGCCACTGGATGCTGGCAAAGGAGTTTTaGAAAAATGGACTGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EMRPRGRVLLPQSRCHWMLAKEF*KNGLPL Trigger: CAAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAG...CATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCTGGGCCTCATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGCTGGCAAAGGAGTTTTaGAAAAATGGACTGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSLAKEF*KNGLPL Trigger: CAAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAG...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | AGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTTTCCATCCCCAGATGTaGCCAGCAGCCAGTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQHLSSGEKTELGEGTGSFHPQM*PAASSC Trigger: GCAGCTACTGGCTGCTGGCCACATCTGGGGATGGAA...AGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTTCCTGTATCATTGCCTaGCTCTGGCGCTGTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQHLSSGEKTELGEGTGSSCIIA*LWRCLA Trigger: AGCCAGACAGCGCCAGAGGCAGGCAATGATACAGGA...AGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTGGTGGTAGTCTTTaGCATTTTGGTCTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPVVVQPSDKMDAPIPVFFGGSL*HFGLLV Trigger: TACCAGCAGACCAAAATGGCAAAGACTACCACCAAA...GAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR GCA 90 bp | AAAGAGCACTTAATTTCATGCCCCAGCAAGAAATGCATGCTCCTGAACCCACAAGTCAGGAGGTCAAGCTaGCGCTGTTGCACACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KEHLISCPSKKCMLLNPQVRRSS*RCCTLC Trigger: ACAGAGTGTGCAACAGCGGCAGCTTGACCTCCTGAC...TTGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCATGAAATTAAGTGCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATTTCAGGATTTCTAGAACCATCTTGGAACATCGAGGGACAACTGTGTTCGTCAGGAGGTCAAGCTaGCGCTGTTGCACACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QDFRISRTILEHRGTTVFVRRSS*RCCTLC Trigger: ACAGAGTGTGCAACAGCGGCAGCTTGACCTCCTGAC...GAACACAGTTGTCCCTCGATGTTCCAAGATGGTTCTAGAAATCCTGAAATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGATGTCATTGCCAAGATaGTCATTGAGTGCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSMSLPR*SLSALP Trigger: TGGTAAAGCACTCAATGAGCATCTTGGCAATGACAT...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGCTCCAGGCTTGTTTTTaGGTCATTGTACATCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSLQACF*VIVHLD Trigger: ATCAAGATGTACAATGACCCAAAAACAAGCCTGGAG...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTAAAATGGACTGCCTTTaGAACCGTTCCTCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSSGCSALRQDGCSHPSLKMDCL*NRSSSS Trigger: TGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTT...AAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | GTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTCCTCCTTGGGGAGTTTTGGAAAAATaGACTGCCTTTGGAACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQPSDKMDAPIPVFFPPWGVLEK*TAFGTV Trigger: AACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCC...CCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| 3UTR CAA 72 bp | TCCAGATGCCACTGGATGTCATTGCCAAGATGCTCATaGAGTGCTTTACCAGAACACATGGGAATTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRCHWMSLPRCS*SALPEHMGIPS Trigger: GCTGGGAATTCCCATGTGTTCTGGTAAAGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR TCA 90 bp | AATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTATCACCTTCTTTTCTaGCCCTTCACGGAGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NAHYLACLPLGIASAVLVYHLLF*PFTEIL Trigger: GAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTGATA...GACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTAGATATTGCCGTACATaGAGCCATTCATCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKCTLFGLPPLGNCFCCPRYCRT*SHSSWW Trigger: CCACCATGATGAATGGCTTCATGTACGGCAATATCT...AGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR TCA 90 bp | CATGCGCCTCTGCTTCATAGCACAGACTATTTTGTTGGCCTTGCTGAGCCAGAAAGATATTGCCGTACATaGAGCCATTCATCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HAPLLHSTDYFVGLAEPERYCRT*SHSSWW Trigger: CCACCATGATGAATGGCTTCATGTACGGCAATATCT...TTCTGGCTCAGCAAGGCCAACAAAATAGTCTGTGCTATGAAGCAGAGGCGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCAGATTATCATTTCCTGTATCATTaGCTGCCTCTGGCGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPVAPLPGSHLVLIADYHFLYH*LPLALS Trigger: AGACAGCGCCAGAGGCAGGCAATGATACAGGAAATG...ATAATCTGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTCGGTCAAAACAGAATaGAAAGGACATCACATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSVKTE*KGHHIV Trigger: AACTATGTGATGTCCTTTGCATTCTGTTTTGACCGA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR GCA 90 bp | GAAGATATAATATCACATTCTAAGGTGATGGGCTCAGTCTTGGTGTCTGTGGGCTCAAGCTGCCGCTGTTaGACACTCTGTCCAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EDIISHSKVMGSVLVSVGSSCRC*TLCPSC Trigger: ACAGCTTGGACAGAGTGTGCAACAGCGGCAGCTTGA...GCCCACAGACACCAAGACTGAGCCCATCACCTTAGAATGTGATATTATATCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR GCA 90 bp | CTATCATGCCCAAGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGTCAGGAGGTCAAGCTaGCGCTGTTGCACACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSCPSQHLSSGEKTELGEVRRSS*RCCTLC Trigger: ACAGAGTGTGCAACAGCGGCAGCTTGACCTCCTGAC...TTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCTTGGGCATGATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTCTTTGGAAAAATGGACTaGCTTTGGAACCGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QWLFSPQTRWMLPSQSSFFGKMD*LWNRSS Trigger: TGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAA...GAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGTAGGGTACTGCTACCACAATCCAGATGCCACTGGATGTCATTGCCAAAAGTCGATGATTCCTTaGCACACAAATGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PEVGYCYHNPDATGCHCQKSMIP*HTNEDG Trigger: GCCATCTTCATTTGTGTGCCAAGGAATCATCGACTT...TTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | GCTCCTTTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCAAAGTCGATGATTCCTTaGCACACAAATGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: APLSPVAPLPGSHLVLIAKSMIP*HTNEDG Trigger: GCCATCTTCATTTGTGTGCCAAGGAATCATCGACTT...TGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAAAGGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTTTTGGTGGTAGTCTTTaGCATTTTGGTCTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LASPWELLLLSLSFISLPFGGSL*HFGLLV Trigger: TACCAGCAGACCAAAATGGCAAAGACTACCACCAAA...AGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTCGGTCAAAACAGAATaGAAAGGACATCACATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPVVVQPSDKMDAPIPVFSVKTE*KGHHIV Trigger: AACTATGTGATGTCCTTTGCATTCTGTTTTGACCGA...GAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR GCA 90 bp | GGAAAATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTTTGGAAAAATGGACTaGCTTTGGAACCGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKCTLFGLPPLGNCFCCPFGKMD*LWNRSS Trigger: TGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAA...AGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | CATGCGCCTCTGCTTCATAGCACAGACTATTTTGTTGGCCTTGCTGAGCCAGAATTTGGAAAAATGGACTaGCTTTGGAACCGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HAPLLHSTDYFVGLAEPEFGKMD*LWNRSS Trigger: TGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAA...TTCTGGCTCAGCAAGGCCAACAAAATAGTCTGTGCTATGAAGCAGAGGCGCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR GCA 90 bp | AAACCACTTTATTTGGGCAATAAAAACCCAGGAAGGTTGCTATGTACACAATGGTGCCAATGGAGACGTTaGTGGTTGAGCCCCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLYLGNKNPGRLLCTQWCQWRR*WLSPLG Trigger: CCCCAAGGGGCTCAACCAGCAACGTCTCCATTGGCA...CCATTGTGTACATAGCAACCTTCCTGGGTTTTTATTGCCCAAATAAAGTGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTCCAGAGTATCCATTTaGAAGCACTATGTATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSRVSI*KHYVFV Trigger: AACAAATACATAGTGCTTCCAAATGGATACTCTGGA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTCTCCAGGCTTGTTTTTaGGTCATTGTACATCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGCSALRQDGCSHPSLLLQACF*VIVHLD Trigger: ATCAAGATGTACAATGACCCAAAAACAAGCCTGGAG...AAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGCACTTAATTTCATGCCCCAGCAAGAAATGCATGCTCCTGAACCCACAAGCCATTCATCATGGTaGAGTGAGCGTGGATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ERALNFMPQQEMHAPEPTSHSSW*SERGCQ Trigger: TTGACATCCACGCTCACTCCACCATGATGAATGGCT...TGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCATGAAATTAAGTGCTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTGGAGTTTTGGAAAAATaGACTGCCTTTGGAACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LASPWELLLLSLSFISLPGVLEK*TAFGTV Trigger: AACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCC...AGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTCTGGCAAAGGAGTTTTaGAAAAATGGACTGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LASPWELLLLSLSFISLPLAKEF*KNGLPL Trigger: CAAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAG...AGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGAATTCGAGGTTAGCCTGGTCTACAAAGCAAGTTACAGGAGAGCCAGGTACCCAGAGCCTCAGTaGAAGGTTTCCCAGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISEFEVSLVYKASYRRARYPEPQ*KVSQYL Trigger: AAGATACTGGGAAACCTTCCACTGAGGCTCTGGGTA...CCTGGCTCTCCTGTAACTTGCTTTGTAGACCAGGCTAACCTCGAATTCAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR CAA 72 bp | GTACTGCTACCACAATCCAGATGCCACTGGATGTCATaGCCAAGATGCTCATTGAGTGCTTTACCAGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VLLPQSRCHWMS*PRCSLSALPEH Trigger: GTGTTCTGGTAAAGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAGCAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR TCA 90 bp | CTATCATGCCCAAGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAACGGGCAATTGGATGCTaGCTTACAAGGAAGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSCPSQHLSSGEKTELGERAIGC*LTRKSM Trigger: CATCGACTTCCTTGTAAGTCAGCATCCAATTGCCCG...TTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCTTGGGCATGATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR GCA 90 bp | ATACTATCATGCCCAAGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGATCAAGCTGCCGCTGTTaGACACTCTGTCCAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILSCPSQHLSSGEKTELGSSCRC*TLCPSC Trigger: ACAGCTTGGACAGAGTGTGCAACAGCGGCAGCTTGA...TCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCTTGGGCATGATAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGTACTGGGTCTGTAAAATTCAGACATCTTCATGCTTAGTATCTTCCTGCGGAGATTCTCCGGGCTaGTTATCGTCAGGAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RRYWVCKIQTSSCLVSSCGDSPG*LSSGGQ Trigger: TTGACCTCCTGACGATAACCAGCCCGGAGAATCTCC...GCAGGAAGATACTAAGCATGAAGATGTCTGAATTTTACAGACCCAGTACCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCAGATTATAAAATGGACTGCCTTTaGAACCGTTCCTCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPVAPLPGSHLVLIADYKMDCL*NRSSSS Trigger: TGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTT...ATAATCTGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | GATTTCCTCTGCTCCATGGAAGAGAAAGCCTGTGCTGACCTGATTCCATTTGCAGTTGATGGGTCTTTGTaGTTCAGTGAGTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DFLCSMEEKACADLIPFAVDGSL*FSEFFL Trigger: CAAGAAGAACTCACTGAACCACAAAGACCCATCAAC...TGCAAATGGAATCAGGTCAGCACAGGCTTTCTCTTCCATGGAGCAGAGGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGTTGATGACACACATCTTTTCTCCCAGCACTCAGAAGGCAGAGACAGTAGCTCTGATCCTTATTaGACAAAAGAGGCAACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSVDDTHLFSQHSEGRDSSSDPY*TKEATA Trigger: TGCAGTTGCCTCTTTTGTCCAATAAGGATCAGAGCT...ACTGTCTCTGCCTTCTGAGTGCTGGGAGAAAAGATGTGTGTCATCAACACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR TCA 90 bp | AAAGAGCACTTAATTTCATGCCCCAGCAAGAAATGCATGCTCCTGAACCCACAAGTCTTTGTGGTTCAGTaGGTTCTTCTTGTCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEHLISCPSKKCMLLNPQVFVVQ*VLLVPF Trigger: AAAGGGGACAAGAAGAACTCACTGAACCACAAAGAC...TTGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCATGAAATTAAGTGCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | CATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTGTAAAACATTTCCTGTATCATTaGCTGCCTCTGGCGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSGEKTELGEGTGSVKHFLYH*LPLALS Trigger: AGACAGCGCCAGAGGCAGGCAATGATACAGGAAATG...TTTTACAGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTTCGGTCAAAACAGAATaGAAAGGACATCACATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LASPWELLLLSLSFISLPSVKTE*KGHHIV Trigger: AACTATGTGATGTCCTTTGCATTCTGTTTTGACCGA...AGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | CATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTGTAAAACTGCTGAGGACATCCTaGTACTCACTGGGTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSGEKTELGEGTGSVKLLRTS*YSLGHC Trigger: ACAATGACCCAGTGAGTAGCAGGATGTCCTCAGCAG...TTTTACAGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTCCTCCTTCCAGAGTATCCATTTaGAAGCACTATGTATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVQPSDKMDAPIPVFFPPSRVSI*KHYVFV Trigger: AACAAATACATAGTGCTTCCAAATGGATACTCTGGA...AGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CCA 90 bp | GAAGATATAATATCACATTCTAAGGTGATGGGCTCAGTCTTGGTGTCTGTGGGCAAAATGGACTGCCTTTaGAACCGTTCCTCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EDIISHSKVMGSVLVSVGKMDCL*NRSSSS Trigger: TGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTT...GCCCACAGACACCAAGACTGAGCCCATCACCTTAGAATGTGATATTATATCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR CAA 72 bp | TGCCCCATTGTTCCCAACAGCATGTTTGCCTCTGGCTaGTATGTGTGTTGTTGTTGCTTTGGATCAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CPIVPNSMFASG*YVCCCCFGSEN Trigger: ATTTTCTGATCCAAAGCAACAACAACACACATACAAGCCAGAGGCAAACATGCTGTTGGGAACAATGGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR CAA 72 bp | TTCAAAACTTCTGCCCCATTGTTCCCAACAGCATGTTaGCCTCTGGCTTGTATGTGTGTTGTTGTTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FKTSAPLFPTAC*PLACMCVVVAL Trigger: CAAAGCAACAACAACACACATACAAGCCAGAGGCAAACATGCTGTTGGGAACAATGGGGCAGAAGTTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR CAA 72 bp | AATACTGAAGGAGACCAAAGTAGGTGTGGTGTGGAGTaGATCTTCACCTGTGTCTTTAAGGAGTTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTEGDQSRCGVE*IFTCVFKELED Trigger: ATCCTCCAACTCCTTAAAGACACAGGTGAAGATCAACTCCACACCACACCTACTTTGGTCTCCTTCAGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTGATCTTCACCTGTGTCTTTAAGGAGTTGGAGGATCACACTACCAAATGTTATCACCTTCTTTTCTaGCCCTTCACGGAGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELIFTCVFKELEDHTTKCYHLLF*PFTEIL Trigger: GAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTGATA...ACATTTGGTAGTGTGATCCTCCAACTCCTTAAAGACACAGGTGAAGATCAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR TCA 90 bp | AAAATTCAGACATCTTCATGCTTAGTATCTTCCTGCTTTTGCTCATGTAACCCTTCCTTGGCACACAAATaGAGATGGCGTTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KIQTSSCLVSSCFCSCNPSLAHK*RWRFPW Trigger: CCAGGGGAAACGCCATCTTCATTTGTGTGCCAAGGA...AGGGTTACATGAGCAAAAGCAGGAAGATACTAAGCATGAAGATGTCTGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTTTTGGTGGTAGTCTTTaGCATTTTGGTCTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQHLSSGEKTELGEGTGSFGGSL*HFGLLV Trigger: TACCAGCAGACCAAAATGGCAAAGACTACCACCAAA...AGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CCA 90 bp | CATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTGTAAAAGGTAGATTTCACCATTaGTGCCATCCCATCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HLSSGEKTELGEGTGSVKGRFHH*CHPISV Trigger: TACCGAGATGGGATGGCACCAATGGTGAAATCTACC...TTTTACAGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CCA 90 bp | GAAGATATAATATCACATTCTAAGGTGATGGGCTCAGTCTTGGTGTCTGTGGGCGGAGTTTTGGAAAAATaGACTGCCTTTGGAACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: EDIISHSKVMGSVLVSVGGVLEK*TAFGTV Trigger: AACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCC...GCCCACAGACACCAAGACTGAGCCCATCACCTTAGAATGTGATATTATATCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR CAA 72 bp | CAACAGCATGTTTGCCTCTGGCTTGTATGTGTGTTGTaGTTGCTTTGGATCAGAAAATACGGAGACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QQHVCLWLVCVL*LLWIRKYGDCI Trigger: AATGCAGTCTCCGTATTTTCTGATCCAAAGCAACAACAACACACATACAAGCCAGAGGCAAACATGCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR CAA 72 bp | GATATAATATCACATTCTAAGGTGATGGGCTCAGTCTaGGTGTCTGTGGGCAGAGCATCCAGTTCTTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: DIISHSKVMGSV*VSVGRASSSYH Trigger: ATGATAAGAACTGGATGCTCTGCCCACAGACACCAAGACTGAGCCCATCACCTTAGAATGTGATATTATATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR TCA 90 bp | TACATTGGGAGAGGTTCTCTCAAAGTGACACAACTTAAATCCAGTTTTATCAGTCCAACTCTCTTTCCTTaGGCAGTTCGGCCTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YIGRGSLKVTQLKSSFISPTLFP*AVRPRE Trigger: TTCTCTAGGCCGAACTGCTCAAGGAAAGAGAGTTGG...ACTGATAAAACTGGATTTAAGTTGTGTCACTTTGAGAGAACCTCTCCCAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR GCA 90 bp | TACATTGGGAGAGGTTCTCTCAAAGTGACACAACTTAAATCCAGTTTTATCAGTCATTTCCTGTATCATTaGCTGCCTCTGGCGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YIGRGSLKVTQLKSSFISHFLYH*LPLALS Trigger: AGACAGCGCCAGAGGCAGGCAATGATACAGGAAATG...ACTGATAAAACTGGATTTAAGTTGTGTCACTTTGAGAGAACCTCTCCCAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CCA 90 bp | GAGTTGATCTTCACCTGTGTCTTTAAGGAGTTGGAGGATCACACTACCAAATGTAAGTCGATGATTCCTTaGCACACAAATGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELIFTCVFKELEDHTTKCKSMIP*HTNEDG Trigger: GCCATCTTCATTTGTGTGCCAAGGAATCATCGACTT...ACATTTGGTAGTGTGATCCTCCAACTCCTTAAAGACACAGGTGAAGATCAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAGCACTTAATTTCATGCCCCAGCAAGAAATGCATGCTCCTGAACCCACAACTCCAGGCTTGTTTTTaGGTCATTGTACATCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KEHLISCPSKKCMLLNPQLQACF*VIVHLD Trigger: ATCAAGATGTACAATGACCCAAAAACAAGCCTGGAG...TTGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCATGAAATTAAGTGCTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTGATCTTCACCTGTGTCTTTAAGGAGTTGGAGGATCACACTACCAAATGTCTGGCAAAGGAGTTTTaGAAAAATGGACTGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELIFTCVFKELEDHTTKCLAKEF*KNGLPL Trigger: CAAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAG...ACATTTGGTAGTGTGATCCTCCAACTCCTTAAAGACACAGGTGAAGATCAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| 3UTR CAA 72 bp | TTCACTAGCTTATGTATTATCCTGAAAACCCCTGTCTaGGAAACCAGGAAAGAGCACTTAATTTCATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FTSLCIILKTPV*ETRKEHLISCP Trigger: GGGGCATGAAATTAAGTGCTCTTTCCTGGTTTCCAAGACAGGGGTTTTCAGGATAATACATAAGCTAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| 3UTR CAA 72 bp | CCAAGCCAACATTTGAGTAGTGGAGAAAAGACAGAATaGGGAGAAGGTACTGGGTCTGTAAAATTCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PSQHLSSGEKTE*GEGTGSVKFRH Trigger: ATGTCTGAATTTTACAGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR TCA 90 bp | AATGTGCAATACTTTTTGTTTGGAGGAGCTAGAAATTCAATTAAACTAGCCAGGCGGGCAATTGGATGCTaGCTTACAAGGAAGTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: NVQYFLFGGARNSIKLARRAIGC*LTRKSM Trigger: CATCGACTTCCTTGTAAGTCAGCATCCAATTGCCCG...CCTGGCTAGTTTAATTGAATTTCTAGCTCCTCCAAACAAAAAGTATTGCACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGCACTTAATTTCATGCCCCAGCAAGAAATGCATGCTCCTGAACCCACATCCAGAGTATCCATTTaGAAGCACTATGTATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ERALNFMPQQEMHAPEPTSRVSI*KHYVFV Trigger: AACAAATACATAGTGCTTCCAAATGGATACTCTGGA...TGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCATGAAATTAAGTGCTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR TCA 90 bp | AAAATTCAGACATCTTCATGCTTAGTATCTTCCTGCTTTTGCTCATGTAACCCTTATCACCTTCTTTTCTaGCCCTTCACGGAGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KIQTSSCLVSSCFCSCNPYHLLF*PFTEIL Trigger: GAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTGATA...AGGGTTACATGAGCAAAAGCAGGAAGATACTAAGCATGAAGATGTCTGAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR TCA 90 bp | TACATTGGGAGAGGTTCTCTCAAAGTGACACAACTTAAATCCAGTTTTATCAGTGAGTTGCTCCAGCTCTaGTCCTTATTGGACAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YIGRGSLKVTQLKSSFISELLQL*SLLDKR Trigger: TCTTTTGTCCAATAAGGATCAGAGCTGGAGCAACTC...ACTGATAAAACTGGATTTAAGTTGTGTCACTTTGAGAGAACCTCTCCCAATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR CAA 72 bp | AAACCACTTTATTTGGGCAATAAAAACCCAGGAAGGTaGCTATGTACACAATGGGACACTCATAGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KPLYLGNKNPGR*LCTQWDTHSKL Trigger: CAGTTTGCTATGAGTGTCCCATTGTGTACATAGCAACCTTCCTGGGTTTTTATTGCCCAAATAAAGTGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR GCA 90 bp | ATACTATCATGCCCAAGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGATCGGTCAAAACAGAATaGAAAGGACATCACATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILSCPSQHLSSGEKTELGSVKTE*KGHHIV Trigger: AACTATGTGATGTCCTTTGCATTCTGTTTTGACCGA...TCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCTTGGGCATGATAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CCA 90 bp | AAAATTCAGACATCTTCATGCTTAGTATCTTCCTGCTTTTGCTCATGTAACCCTAAGTCGATGATTCCTTaGCACACAAATGAAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KIQTSSCLVSSCFCSCNPKSMIP*HTNEDG Trigger: GCCATCTTCATTTGTGTGCCAAGGAATCATCGACTT...AGGGTTACATGAGCAAAAGCAGGAAGATACTAAGCATGAAGATGTCTGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CCA 90 bp | AAAATTCAGACATCTTCATGCTTAGTATCTTCCTGCTTTTGCTCATGTAACCCTCATCCTGCTACTCACTaGGTCATTGTACATCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KIQTSSCLVSSCFCSCNPHPATH*VIVHLD Trigger: ATCAAGATGTACAATGACCCAGTGAGTAGCAGGATG...AGGGTTACATGAGCAAAAGCAGGAAGATACTAAGCATGAAGATGTCTGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTTCACTTATTTTCACATGAAAGATGGCTGACTTCCCATACTGGACAACCAGACAAAAGAGGCAACTaGAATTCTTTCACATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFHLFSHERWLTSHTGQPDKRGN*NSFTFS Trigger: TGAAAATGTGAAAGAATTGCAGTTGCCTCTTTTGTC...TGGTTGTCCAGTATGGGAAGTCAGCCATCTTTCATGTGAAAATAAGTGAAAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CCA 90 bp | CATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTGTAAAATCCAGAGTATCCATTTaGAAGCACTATGTATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSGEKTELGEGTGSVKSRVSI*KHYVFV Trigger: AACAAATACATAGTGCTTCCAAATGGATACTCTGGA...TTTTACAGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| 3UTR CAA 72 bp | CTAGAATATCAGGATTTCAGGATTTCTAGAACCATCTaGGAACATCGAGGGACAACTGTGTTCCTAATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LEYQDFRISRTI*EHRGTTVFLIY Trigger: ATAAATTAGGAACACAGTTGTCCCTCGATGTTCCAAGATGGTTCTAGAAATCCTGAAATCCTGATATTCTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR CCA 90 bp | TACATTGGGAGAGGTTCTCTCAAAGTGACACAACTTAAATCCAGTTTTATCAGTTCCAGAGTATCCATTTaGAAGCACTATGTATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YIGRGSLKVTQLKSSFISSRVSI*KHYVFV Trigger: AACAAATACATAGTGCTTCCAAATGGATACTCTGGA...ACTGATAAAACTGGATTTAAGTTGTGTCACTTTGAGAGAACCTCTCCCAATGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| 3UTR CAA 72 bp | AGCCAGGGTGACTTCCCACTATTTACAAAACATCTATaGTTCTTCATTACCTACTATTCAAGTTTGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGDFPLFTKHL*FFITYYSSLNS Trigger: GGAATTCAAACTTGAATAGTAGGTAATGAAGAACAATAGATGTTTTGTAAATAGTGGGAAGTCACCCTGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS GCA 90 bp | CAGGTGTCCGGCCTAATGAACAGATCATACTCAAAATCAGAGACTTaGTCAACCCGGCCGAGGTTACCTGCCTCTGGCGCTGTCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVSGLMNRSYSKSET*STRPRLPASGAVWL Trigger: GAGCCAGACAGCGCCAGAGGCAGGTAACCTCGGCCGGGTTGAGCAAGTCTCTGATTTTGAGTATGATCTGTTCATTAGGCCGGACACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106589.9 |
||
| CDS TCA 90 bp | TTCCCCTGGGTGGACTCGCCCTGTGATGAATATCACCTTCTTTTCTaGCCCTTCACGGAGATTCTCCGGGCTGGTTATCGTCAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FPWVDSPCDEYHLLF*PFTEILRAGYRQEV Trigger: GACCTCCTGACGATAACCAGCCCGGAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTGATATTCATCACAGGGCGAGTCCACCCAGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTCATTTCCTGTATCATaGCCTGCCTCTGGCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSFPVS*PASGAV Trigger: GACAGCGCCAGAGGCAGGCAATGATACAGGAAATGA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGCAGCACTTCCAGTGGTaGTTCAGCCCTCAGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSQHFQW*FSPQTR Trigger: TCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTG...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS CCA 90 bp | TGGATGCTCCCATCCCAGTCTTCTTTCCTCCTTGGATCGAAGTCTTaGCATGGGGACTGCTATCTTCTCAACCAGGGAGTTCAGCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: WMLPSQSSFLLGSKS*HGDCYLLNQGVQPV Trigger: TACCGGCTGAACTCCCTGGTTGAGAAGATAGCAGTCCCCATGCCAAGACTTCGATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS CCA 90 bp | CCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTCCTCCTTaGATCGAAGTCTTGGCATGGGGACTGCTATCTTCTCAACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSDKMDAPIPVFFPP*IEVLAWGLLSSQPG Trigger: CCCTGGTTGAGAAGATAGCAGTCCCCATGCCAAGACTTCGATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGGGACAGACATGGGCCCCAGGGCCTATGGAAGATGTGGCACCTGGAAGTCATCCTCAAAGATATaGCCGTACATGAAGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SSGTDMGPRAYGRCGTWKSSSKI*PYMKPF Trigger: GAATGGCTTCATGTACGGCAATATCTTTGAGGATGA...CTTCCAGGTGCCACATCTTCCATAGGCCCTGGGGCCCATGTCTGTCCCACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS GCA 90 bp | ATTCCCAGCACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATaGTCCCATCCCAGTCTTCTTTCCTCCTTGGATCGAAGTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IPSTSSGCSALRQDG*SHPSLLSSLDRSLG Trigger: GCCAAGACTTCGATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTGGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS CCA 90 bp | GGGAATTCCCAGCACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATaGATGCTCCCATCCCAGTCTTCTTTCCTCCTTGGATCGAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GNSQHFQWLFSPQTR*MLPSQSSFLLGSKS Trigger: AGACTTCGATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTGGGAATTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTCATTTCCTGTATCATaGCCTGCCTCTGGCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSGCSALRQDGCSHPSLLSFPVS*PASGAV Trigger: GACAGCGCCAGAGGCAGGCAATGATACAGGAAATGA...AAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGTAAGATGTCCTTTCTaGGGCTGTCCAGAGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSVRCPF*GCPEYP Trigger: TGGATACTCTGGACAGCCCAAGAAAGGACATCTTAC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGAAAAATGGACTGCCTTaGGAACCGTTCCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSKNGLP*EPFLIL Trigger: GAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTT...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGAGTCTTCTTTCCTCCTaGGATCGAAGTCTTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSLLSS*DRSLGM Trigger: CATGCCAAGACTTCGATCCAAGGAGGAAAGAAGACT...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTGCCACTGGATGTCATaGCCAAGATGCTCATTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSCHWMS*PRCSLS Trigger: ACTCAATGAGCATCTTGGCAATGACATCCAGTGGCA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS CCA 90 bp | GCTCCCATCCCAGTCTTCTTTCCTCCTTGGATCGAAGTCTTGGCATaGGGACTGCTATCTTCTCAACCAGGGAGTTCAGCCGGTAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: APIPVFFPPWIEVLA*GLLSSQPGSSAGNN Trigger: ATTATTACCGGCTGAACTCCCTGGTTGAGAAGATAGCAGTCCCCATGCCAAGACTTCGATCCAAGGAGGAAAGAAGACTGGGATGGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
||
| CDS CCA 90 bp | GTGGGTGCTTGCAAGGAGGGGCTTTTTCTTTCCGAAGTCTTGGCATaGGGACTGCTATCTTCTCAACCAGGGAGTTCAGCCGGTAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: VGACKEGLFLSEVLA*GLLSSQPGSSAGNN Trigger: ATTATTACCGGCTGAACTCCCTGGTTGAGAAGATAGCAGTCCCCATGCCAAGACTTCGGAAAGAAAAAGCCCCTCCTTGCAAGCACCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTCATTTCCTGTATCATaGCCTGCCTCTGGCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GKCTLFGLPPLGNCFCCPSFPVS*PASGAV Trigger: GACAGCGCCAGAGGCAGGCAATGATACAGGAAATGA...AGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGGAAGCACTATGTATTaGTTCACATTCCCTCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSGSTMY*FTFPPM Trigger: CATTGGAGGGAATGTGAACAAATACATAGTGCTTCC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSFSTVK*NQTRKR Trigger: ACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTCATCCTCAAAGATATaGCCGTACATGAAGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSSSKI*PYMKPF Trigger: GAATGGCTTCATGTACGGCAATATCTTTGAGGATGA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | CCCATCCCAGTCTTCTTTCCTCCTTGGATCTACAAGTGGGTCCATCAGAGGAGTAAAAATGGACTGCCTTaGGAACCGTTCCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PIPVFFPPWIYKWVHQRSKNGLP*EPFLIL Trigger: GAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTT...ACTCCTCTGATGGACCCACTTGTAGATCCAAGGAGGAAAGAAGACTGGGATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGTCTGGCAAAGGAGTTTaGGAAAAATGGACTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSGKGV*EKWTAF Trigger: AAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAGA...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | CCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTGCCTGGAGTTTCTTCTTGTCCCCTTaGCCAATGGAGACGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PWELLLLSLSFISLPAWSFFLSP*PMETLL Trigger: CAGCAACGTCTCCATTGGCAAAGGGGACAAGAAGAA...ACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS TCA 90 bp | CATACAATCTTCCATCCCCAGATGTGGCCAGCAGCCAGTAGCTGCTaGGGACATCCTGCTACTCACTGGGTCATTGTACATCTTGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: HTIFHPQMWPAASSC*GHPATHWVIVHLDN Trigger: ATTATCAAGATGTACAATGACCCAGTGAGTAGCAGGATGTCCTCAGCAGCTACTGGCTGCTGGCCACATCTGGGGATGGAAGATTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS GCA 90 bp | ATAGTGGGATCTAGCAAGGATACAGGCTTCTTCAGTGTAGGGCACTaGAGCTGTAGTACCCCCAATGATGTAGCTGTAGAAGGAAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: IVGSSKDTGFFSVGH*SCSTPNDVAVEGNL Trigger: GAGGTTTCCTTCTACAGCTACATCATTGGGGGTACTACAGCTGCAGTGCCCTACACTGAAGAAGCCTGTATCCTTGCTAGATCCCACTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS CCA 90 bp | TCGATGATTCCTTGGCACACAAATGAAGATGGCGTTTCCCCTGGGTaGACTCGCCCTGTGATGAATATCACCTTCTTTTCTGACCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SMIPWHTNEDGVSPG*TRPVMNITFFSDPS Trigger: TGAAGGGTCAGAAAAGAAGGTGATATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCCATCTTCATTTGTGTGCCAAGGAATCATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGGTCCAGAGTATCCATTaGGAAGCACTATGTATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSVQSIH*EALCIC Trigger: ACAAATACATAGTGCTTCCAAATGGATACTCTGGAC...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LPVVVQPSDKMDAPIPVFFSTVK*NQTRKR Trigger: ACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAA...GAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CAA 90 bp | GGGGGATGGAGGAAGGTTCATGGTGCTAAGCTCCTGAGGCATCAAAGCACATCGAGCATTGGAGCAATCTaGAAGACTAAATGTTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GGWRKVHGAKLLRHQSTSSIGAI*KTKCSR Trigger: ACGAGAACATTTAGTCTTCAAGATTGCTCCAATGCT...CGATGTGCTTTGATGCCTCAGGAGCTTAGCACCATGAACCTTCCTCCATCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 |
||
| CDS-3UTR CAA 90 bp | TGGGCTCAGTCTTGGTGTCTGTGGGCAGAGCATCCAGTTCTTATCATGACATCTAAAAATGGACTGCCTTaGGAACCGTTCCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WAQSWCLWAEHPVLIMTSKNGLP*EPFLIL Trigger: GAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTT...AGATGTCATGATAAGAACTGGATGCTCTGCCCACAGACACCAAGACTGAGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTCGGAAGCACTATGTATTaGTTCACATTCCCTCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: QWLFSPQTRWMLPSQSSFGSTMY*FTFPPM Trigger: CATTGGAGGGAATGTGAACAAATACATAGTGCTTCC...GAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CAA 90 bp | GATTTCCTCTGCTCCATGGAAGAGAAAGCCTGTGCTGACCTGATTCCATTTGCAGTAAGATGTCCTTTCTaGGGCTGTCCAGAGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: DFLCSMEEKACADLIPFAVRCPF*GCPEYP Trigger: TGGATACTCTGGACAGCCCAAGAAAGGACATCTTAC...TGCAAATGGAATCAGGTCAGCACAGGCTTTCTCTTCCATGGAGCAGAGGAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CAA 90 bp | CACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTAGCATTGGAGCAATCTaGAAGACTAAATGTTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: HFQWLFSPQTRWMLPSQSSIGAI*KTKCSR Trigger: ACGAGAACATTTAGTCTTCAAGATTGCTCCAATGCT...AGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CAA 90 bp | CCCATCCCAGTCTTCTTTCCTCCTTGGATCTACAAGTGGGTCCATCAGAGGAGTTCATCCTCAAAGATATaGCCGTACATGAAGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: PIPVFFPPWIYKWVHQRSSSSKI*PYMKPF Trigger: GAATGGCTTCATGTACGGCAATATCTTTGAGGATGA...ACTCCTCTGATGGACCCACTTGTAGATCCAAGGAGGAAAGAAGACTGGGATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CAA 90 bp | CCAGTGGTTGTTCAGCCCTCAGACAAGATGGATGCTCCCATCCCAGTCTTCTTTTCTGGCAAAGGAGTTTaGGAAAAATGGACTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PVVVQPSDKMDAPIPVFFSGKGV*EKWTAF Trigger: AAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAGA...AAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080744.13 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCATCTGGCAAAGGAGTTTaGGAAAAATGGACTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: APLSPVAPLPGSHLVLIASGKGV*EKWTAF Trigger: AAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAGA...TGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAAAGGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGCACTTAATTTCATGCCCCAGCAAGAAATGCATGCTCCTGAACCCACAGGGGTTGATGGGTCTTaGTGGTTCAGTGAGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ERALNFMPQQEMHAPEPTGVDGS*WFSEFF Trigger: GAAGAACTCACTGAACCACAAAGACCCATCAACCCC...TGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCATGAAATTAAGTGCTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS CCA 90 bp | TCCTCGGCATTCTGGCAAAGGAGTTTTGGAAAAATGGACTGCCTTTaGAACCGTTCCTCATCCTCAAAGATATTGCCGTACATGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSAFWQRSFGKMDCL*NRSSSSKILPYMKP Trigger: TGGCTTCATGTACGGCAATATCTTTGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAGAATGCCGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS-3UTR CAA 90 bp | AATGCACACTATTTGGCTTGCCTCCCCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: NAHYLACLPLGIASAVLVFSTVK*NQTRKR Trigger: ACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAA...GACAAGGACAGCAGAAGCAATTCCCAAGGGGAGGCAAGCCAAATAGTGTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCAAGCATTGGAGCAATCTaGAAGACTAAATGTTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: APLSPVAPLPGSHLVLIASIGAI*KTKCSR Trigger: ACGAGAACATTTAGTCTTCAAGATTGCTCCAATGCT...TGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAAAGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGCACTTAATTTCATGCCCCAGCAAGAAATGCATGCTCCTGAACCCACAAAAAATGGACTGCCTTaGGAACCGTTCCTCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ERALNFMPQQEMHAPEPTKNGLP*EPFLIL Trigger: GAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTT...TGTGGGTTCAGGAGCATGCATTTCTTGCTGGGGCATGAAATTAAGTGCTCTTTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS CCA 90 bp | AGTATCCATTTGGAAGCACTATGTATTTGTTCACATTCCCTCCAATaGCATCCTCATTTCCTGTATCATTGCCTGCCTCTGGCGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIHLEALCICSHSLQ*HPHFLYHCLPLALS Trigger: AGACAGCGCCAGAGGCAGGCAATGATACAGGAAATGAGGATGCCATTGGAGGGAATGTGAACAAATACATAGTGCTTCCAAATGGATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106587.9 ENSMUST00000106591.8 ENSMUST00000106592.8 |
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| CDS-3UTR CAA 90 bp | ACCTTTCACTTATTTTCACATGAAAGATGGCTGACTTCCCATACTGGACAACCATCATTTCCTGTATCATaGCCTGCCTCTGGCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TFHLFSHERWLTSHTGQPSFPVS*PASGAV Trigger: GACAGCGCCAGAGGCAGGCAATGATACAGGAAATGA...TGGTTGTCCAGTATGGGAAGTCAGCCATCTTTCATGTGAAAATAAGTGAAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CAA 90 bp | CCTTGGGAATTGCTTCTGCTGTCCTTGTCTTTTATCTCCCTACCTGCCTGGAGTGTCCAGAGTATCCATTaGGAAGCACTATGTATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PWELLLLSLSFISLPAWSVQSIH*EALCIC Trigger: ACAAATACATAGTGCTTCCAAATGGATACTCTGGAC...ACTCCAGGCAGGTAGGGAGATAAAAGACAAGGACAGCAGAAGCAATTCCCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGTTGGCAGGAGAGGGTGTCCAGGGGCATTTAAGAATGGCTAGATTTTGGTCTGGCAAAGGAGTTTaGGAAAAATGGACTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QMLAGEGVQGHLRMARFWSGKGV*EKWTAF Trigger: AAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAGA...CCAAAATCTAGCCATTCTTAAATGCCCCTGGACACCCTCTCCTGCCAACATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS GCA 90 bp | GCAGTAAGCAAACTGGTAGATATCATCTTCTCGGTCAAAACAGAATaGAAAGGACATCACATAGTTCTTCCTGTGGTCTGGGCAGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: AVSKLVDIIFSVKTE*KGHHIVLPVVWAAI Trigger: TATCGCTGCCCAGACCACAGGAAGAACTATGTGATGTCCTTTGCATTCTGTTTTGACCGAGAAGATGATATCTACCAGTTTGCTTACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 |
||
| CDS GCA 90 bp | CAGTGGAAGGTTTCCCAGTATCTTGTCTCTTTATCTTCAGGGAGTTaGTCCAGCTCTGATCCTTATTGGACAAAAGAGGCAACTGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: QWKVSQYLVSLSSGS*SSSDPYWTKEATAI Trigger: AATTGCAGTTGCCTCTTTTGTCCAATAAGGATCAGAGCTGGAGCAACTCCCTGAAGATAAAGAGACAAGATACTGGGAAACCTTCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGTGTTGATGACACACATCTTTTCTCCCAGCACTCAGAAGGCAGAGACAGTGTCCAGAGTATCCATTaGGAAGCACTATGTATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSVDDTHLFSQHSEGRDSVQSIH*EALCIC Trigger: ACAAATACATAGTGCTTCCAAATGGATACTCTGGAC...ACTGTCTCTGCCTTCTGAGTGCTGGGAGAAAAGATGTGTGTCATCAACACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CAA 90 bp | TTGTCTCCTGTAGCCCCCTTACCTGGTAGTCACCTTGTTCTCATTGCAGATTATTCATCCTCAAAGATATaGCCGTACATGAAGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LSPVAPLPGSHLVLIADYSSSKI*PYMKPF Trigger: GAATGGCTTCATGTACGGCAATATCTTTGAGGATGA...ATAATCTGCAATGAGAACAAGGTGACTACCAGGTAAGGGGGCTACAGGAGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
||
| CDS CCA 90 bp | ATCAAAGGTAAGATGTCCTTTCTTGGGCTGTCCAGAGTATCCATTTaGAAGCACTATGTATTTGTTCACATTCCCTCCAATGGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IKGKMSFLGLSRVSI*KHYVFVHIPSNGIL Trigger: GAGGATGCCATTGGAGGGAATGTGAACAAATACATAGTGCTTCCAAATGGATACTCTGGACAGCCCAAGAAAGGACATCTTACCTTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106587.9 ENSMUST00000106591.8 ENSMUST00000106592.8 |
||
| CDS-3UTR CAA 90 bp | AAAATTCAGACATCTTCATGCTTAGTATCTTCCTGCTTTTGCTCATGTAACCCTTCATTTCCTGTATCATaGCCTGCCTCTGGCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KIQTSSCLVSSCFCSCNPSFPVS*PASGAV Trigger: GACAGCGCCAGAGGCAGGCAATGATACAGGAAATGA...AGGGTTACATGAGCAAAAGCAGGAAGATACTAAGCATGAAGATGTCTGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CAA 90 bp | ACCTTTCACTTATTTTCACATGAAAGATGGCTGACTTCCCATACTGGACAACCAGTAAGATGTCCTTTCTaGGGCTGTCCAGAGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: TFHLFSHERWLTSHTGQPVRCPF*GCPEYP Trigger: TGGATACTCTGGACAGCCCAAGAAAGGACATCTTAC...TGGTTGTCCAGTATGGGAAGTCAGCCATCTTTCATGTGAAAATAAGTGAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CAA 90 bp | CATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTGTAAAAGTAAGATGTCCTTTCTaGGGCTGTCCAGAGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HLSSGEKTELGEGTGSVKVRCPF*GCPEYP Trigger: TGGATACTCTGGACAGCCCAAGAAAGGACATCTTAC...TTTTACAGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS TCA 90 bp | ATCTTGAAGACTAAATGTTCTCGTAGGACACGGGCAATTGGATGCTaGCTTACAAGGAAGTCGATGATTCCTTGGCACACAAATGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ILKTKCSRRTRAIGC*LTRKSMIPWHTNED Trigger: ATCTTCATTTGTGTGCCAAGGAATCATCGACTTCCTTGTAAGTCAGCATCCAATTGCCCGTGTCCTACGAGAACATTTAGTCTTCAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
||
| CDS TCA 90 bp | TTCCCAGTATCTTGTCTCTTTATCTTCAGGGAGTTGCTCCAGCTCTaGTCCTTATTGGACAAAAGAGGCAACTGCAATTCTTTCACATTT | + |
|
Preference number: 5 (lower is better) Translates to: FPVSCLFIFRELLQL*SLLDKRGNCNSFTF Trigger: AAATGTGAAAGAATTGCAGTTGCCTCTTTTGTCCAATAAGGATCAGAGCTGGAGCAACTCCCTGAAGATAAAGAGACAAGATACTGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CAA 90 bp | AGACCTGAGACCTTTCACTTATTTTCACATGAAAGATGGCTGACTTCCCATACTGGAAGCACTATGTATTaGTTCACATTCCCTCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: RPETFHLFSHERWLTSHTGSTMY*FTFPPM Trigger: CATTGGAGGGAATGTGAACAAATACATAGTGCTTCC...AGTATGGGAAGTCAGCCATCTTTCATGTGAAAATAAGTGAAAGGTCTCAGGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CAA 90 bp | AGACCTGAGACCTTTCACTTATTTTCACATGAAAGATGGCTGACTTCCCATACTTTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RPETFHLFSHERWLTSHTFSTVK*NQTRKR Trigger: ACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAA...AGTATGGGAAGTCAGCCATCTTTCATGTGAAAATAAGTGAAAGGTCTCAGGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CAA 90 bp | ATGTTCATATATGAAGGGCATGGGAAGATCACAGATGAACCAAACAGTCCAGAGAGCATTGGAGCAATCTaGAAGACTAAATGTTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: MFIYEGHGKITDEPNSPESIGAI*KTKCSR Trigger: ACGAGAACATTTAGTCTTCAAGATTGCTCCAATGCT...CTCTGGACTGTTTGGTTCATCTGTGATCTTCCCATGCCCTTCATATATGAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTCACTTATTTTCACATGAAAGATGGCTGACTTCCCATACTGGACAACCAAGGTTTCCCAGTATCTaGTCTCTTTATCTTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TFHLFSHERWLTSHTGQPRFPSI*SLYLQG Trigger: TCCCTGAAGATAAAGAGACAAGATACTGGGAAACCT...TGGTTGTCCAGTATGGGAAGTCAGCCATCTTTCATGTGAAAATAAGTGAAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
||
| CDS-3UTR CAA 90 bp | ATACTATCATGCCCAAGCCAACATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGTCCAGAGTATCCATTaGGAAGCACTATGTATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ILSCPSQHLSSGEKTELGVQSIH*EALCIC Trigger: ACAAATACATAGTGCTTCCAAATGGATACTCTGGAC...TCCCAATTCTGTCTTTTCTCCACTACTCAAATGTTGGCTTGGGCATGATAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CAA 90 bp | CATTTGAGTAGTGGAGAAAAGACAGAATTGGGAGAAGGTACTGGGTCTGTAAAAAGCATTGGAGCAATCTaGAAGACTAAATGTTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: HLSSGEKTELGEGTGSVKSIGAI*KTKCSR Trigger: ACGAGAACATTTAGTCTTCAAGATTGCTCCAATGCT...TTTTACAGACCCAGTACCTTCTCCCAATTCTGTCTTTTCTCCACTACTCAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
||
| CDS-3UTR CAA 90 bp | AAAATTCAGACATCTTCATGCTTAGTATCTTCCTGCTTTTGCTCATGTAACCCTGGAAGCACTATGTATTaGTTCACATTCCCTCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KIQTSSCLVSSCFCSCNPGSTMY*FTFPPM Trigger: CATTGGAGGGAATGTGAACAAATACATAGTGCTTCC...AGGGTTACATGAGCAAAAGCAGGAAGATACTAAGCATGAAGATGTCTGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
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| CDS-3UTR CAA 90 bp | AAAATTCAGACATCTTCATGCTTAGTATCTTCCTGCTTTTGCTCATGTAACCCTTTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGT | + |
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Preference number: 5 (lower is better) Translates to: KIQTSSCLVSSCFCSCNPFSTVK*NQTRKR Trigger: ACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAA...AGGGTTACATGAGCAAAAGCAGGAAGATACTAAGCATGAAGATGTCTGAATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
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| CDS-3UTR CAA 90 bp | AATGTGCAATACTTTTTGTTTGGAGGAGCTAGAAATTCAATTAAACTAGCCAGGGGAAGCACTATGTATTaGTTCACATTCCCTCCAATG | + |
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Preference number: 5 (lower is better) Translates to: NVQYFLFGGARNSIKLARGSTMY*FTFPPM Trigger: CATTGGAGGGAATGTGAACAAATACATAGTGCTTCC...CCTGGCTAGTTTAATTGAATTTCTAGCTCCTCCAAACAAAAAGTATTGCACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| CDS TCA 72 bp | AGGGTGGGATGGGCCCATGGAGAGGGATCCAGCCAGTaGCGATTCAGGTCAAACCCCATCAGGGAACACCTG | + |
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Preference number: 6 (lower is better) Translates to: RVGWAHGEGSSQ*RFRSNPIREHL Trigger: CAGGTGTTCCCTGATGGGGTTTGACCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGCCCATCCCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS GCA 72 bp | GTCCAGAAGCCCGCCCAGGAAGCGCCGGCCAGTTCCTaGTTTCACAGCATCCCTGTTGAAGGATGTGCTAGT | + |
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Preference number: 6 (lower is better) Translates to: VQKPAQEAPASS*FHSIPVEGCAS Trigger: ACTAGCACATCCTTCAACAGGGATGCTGTGAAAGCAGGAACTGGCCGGCGCTTCCTGGGCGGGCTTCTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS GCA 72 bp | CATTCCCTCCAATGGCATCCTCATTTCCTGTATCATTaGCTGCCTCTGGCGCTGTCTGGCTCCGCTCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: HSLQWHPHFLYH*LPLALSGSAPP Trigger: TGGCGGAGCGGAGCCAGACAGCGCCAGAGGCAGGCAATGATACAGGAAATGAGGATGCCATTGGAGGGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106587.9 ENSMUST00000106591.8 ENSMUST00000106592.8 |
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| CDS GCA 72 bp | AGATTCTCCGGGCTGGTTATCGTCAGGAGGTCAAGCTaGCGCTGTTGCACACTCTGTCCAAGCTGTTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RFSGLVIVRRSS*RCCTLCPSCSR Trigger: CCGGGAACAGCTTGGACAGAGTGTGCAACAGCGGCAGCTTGACCTCCTGACGATAACCAGCCCGGAGAATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS CCA 72 bp | CCTTCTTTTCTGACCCTTCACGGAGATTCTCCGGGCTaGTTATCGTCAGGAGGTCAAGCTGCCGCTGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: PSFLTLHGDSPG*LSSGGQAAAVA Trigger: TGCAACAGCGGCAGCTTGACCTCCTGACGATAACCAGCCCGGAGAATCTCCGTGAAGGGTCAGAAAAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS CAA 72 bp | CGGGCTGGTTATCGTCAGGAGGTCAAGCTGCCGCTGTaGCACACTCTGTCCAAGCTGTTCCCGGAAGAAATA | + |
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Preference number: 6 (lower is better) Translates to: RAGYRQEVKLPL*HTLSKLFPEEI Trigger: TATTTCTTCCGGGAACAGCTTGGACAGAGTGTGCAACAGCGGCAGCTTGACCTCCTGACGATAACCAGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS TCA 72 bp | TTCCATCCCCAGATGTGGCCAGCAGCCAGTAGCTGCTaGGGACATCCTGCTACTCACTGGGTCATTGTACAT | + |
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Preference number: 6 (lower is better) Translates to: FHPQMWPAASSC*GHPATHWVIVH Trigger: ATGTACAATGACCCAGTGAGTAGCAGGATGTCCTCAGCAGCTACTGGCTGCTGGCCACATCTGGGGATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
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| CDS CAA 90 bp | ATGGATGCTCCCATCCCAGTCTTCTTTCCTCCTTGGATCGAAGTCTaGGCATGGGGACTGCTATCTTCTCAACCAGGGAGTTCAGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: MDAPIPVFFPPWIEV*AWGLLSSQPGSSAG Trigger: ACCGGCTGAACTCCCTGGTTGAGAAGATAGCAGTCCCCATGCCAAGACTTCGATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
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| CDS CAA 72 bp | CCCATCCCAGTCTTCTTTCCTCCTTGGATCGAAGTCTaGGCATGGGGACTGCTATCTTCTCAACCAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: PIPVFFPPWIEV*AWGLLSSQPGS Trigger: ACTCCCTGGTTGAGAAGATAGCAGTCCCCATGCCAAGACTTCGATCCAAGGAGGAAAGAAGACTGGGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
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| CDS TCA 72 bp | GTGGACTCGCCCTGTGATGAATATCACCTTCTTTTCTaGCCCTTCACGGAGATTCTCCGGGCTGGTTATCGT | + |
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Preference number: 6 (lower is better) Translates to: VDSPCDEYHLLF*PFTEILRAGYR Trigger: ACGATAACCAGCCCGGAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTGATATTCATCACAGGGCGAGTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS TCA 72 bp | ACTTACAAGGAAGTCGATGATTCCTTGGCACACAAATaGAGATGGCGTTTCCCCTGGGTGGACTCGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: TYKEVDDSLAHK*RWRFPWVDSPC Trigger: ACAGGGCGAGTCCACCCAGGGGAAACGCCATCTTCATTTGTGTGCCAAGGAATCATCGACTTCCTTGTAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS GCA 72 bp | ACTTCCAGTGGTTGTTCAGCCCTCAGACAAGATGGATaGTCCCATCCCAGTCTTCTTTCCTCCTTGGATCGA | + |
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Preference number: 6 (lower is better) Translates to: TSSGCSALRQDG*SHPSLLSSLDR Trigger: TCGATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
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| CDS CAA 72 bp | CAAGATGGATGCTCCCATCCCAGTCTTCTTTCCTCCTaGGATCGAAGTCTTGGCATGGGGACTGCTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: QDGCSHPSLLSS*DRSLGMGTAIF Trigger: GAAGATAGCAGTCCCCATGCCAAGACTTCGATCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097920.9 |
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| CDS CAA 72 bp | GGGGTTGATGGGTCTTTGTGGTTCAGTGAGTTCTTCTaGTCCCCTTTGCCAATGGAGACGTTGCTGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GVDGSLWFSEFF*SPLPMETLLVE Trigger: CTCAACCAGCAACGTCTCCATTGGCAAAGGGGACAAGAAGAACTCACTGAACCACAAAGACCCATCAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106592.8 |
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| CDS CAA 90 bp | CAGCAGCCAGTAGCTGCTGAGGACATCCTGCTACTCACTGGGTCATaGTACATCTTGATAATAAGCTGTTTCACTCCATGCAGGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: QQPVAAEDILLLTGS*YILIISCFTPCRVG Trigger: TCCCACCCTGCATGGAGTGAAACAGCTTATTATCAAGATGTACAATGACCCAGTGAGTAGCAGGATGTCCTCAGCAGCTACTGGCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106591.8 |
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| CDS CCA 72 bp | CCTTGGCACACAAATGAAGATGGCGTTTCCCCTGGGTaGACTCGCCCTGTGATGAATATCACCTTCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PWHTNEDGVSPG*TRPVMNITFFS Trigger: AGAAAAGAAGGTGATATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCCATCTTCATTTGTGTGCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS CAA 72 bp | CATACCCAGAGCCTCAGTGGAAGGTTTCCCAGTATCTaGTCTCTTTATCTTCAGGGAGTTGCTCCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HTQSLSGRFPSI*SLYLQGVAPAL Trigger: CAGAGCTGGAGCAACTCCCTGAAGATAAAGAGACAAGATACTGGGAAACCTTCCACTGAGGCTCTGGGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
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| CDS GCA 72 bp | TCTAGCAAGGATACAGGCTTCTTCAGTGTAGGGCACTaGAGCTGTAGTACCCCCAATGATGTAGCTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSKDTGFFSVGH*SCSTPNDVAVE Trigger: TTCTACAGCTACATCATTGGGGGTACTACAGCTGCAGTGCCCTACACTGAAGAAGCCTGTATCCTTGCTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148038.2 |
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| CDS CAA 90 bp | GTCCTCGGCATTCTGGCAAAGGAGTTTTGGAAAAATGGACTGCCTTaGGAACCGTTCCTCATCCTCAAAGATATTGCCGTACATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: VLGILAKEFWKNGLP*EPFLILKDIAVHEA Trigger: GGCTTCATGTACGGCAATATCTTTGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAGAATGCCGAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS CAA 90 bp | CTTTCCAGACATACCCAGAGCCTCAGTGGAAGGTTTCCCAGTATCTaGTCTCTTTATCTTCAGGGAGTTGCTCCAGCTCTGATCCTTATT | + |
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Preference number: 6 (lower is better) Translates to: LSRHTQSLSGRFPSI*SLYLQGVAPALILI Trigger: AATAAGGATCAGAGCTGGAGCAACTCCCTGAAGATAAAGAGACAAGATACTGGGAAACCTTCCACTGAGGCTCTGGGTATGTCTGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
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| CDS TCA 72 bp | ACTAAATGTTCTCGTAGGACACGGGCAATTGGATGCTaGCTTACAAGGAAGTCGATGATTCCTTGGCACACA | + |
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Preference number: 6 (lower is better) Translates to: TKCSRRTRAIGC*LTRKSMIPWHT Trigger: TGTGTGCCAAGGAATCATCGACTTCCTTGTAAGTCAGCATCCAATTGCCCGTGTCCTACGAGAACATTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS CCA 72 bp | GAGCATCTCTCTTTCCAGACATACCCAGAGCCTCAGTaGAAGGTTTCCCAGTATCTTGTCTCTTTATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: EHLSFQTYPEPQ*KVSQYLVSLSS Trigger: TGAAGATAAAGAGACAAGATACTGGGAAACCTTCCACTGAGGCTCTGGGTATGTCTGGAAAGAGAGATGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
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| CDS GCA 72 bp | GTTTCCCAGTATCTTGTCTCTTTATCTTCAGGGAGTTaGTCCAGCTCTGATCCTTATTGGACAAAAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: VSQYLVSLSSGS*SSSDPYWTKEA Trigger: TGCCTCTTTTGTCCAATAAGGATCAGAGCTGGAGCAACTCCCTGAAGATAAAGAGACAAGATACTGGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
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| CDS CCA 72 bp | TTCTGGCAAAGGAGTTTTGGAAAAATGGACTGCCTTTaGAACCGTTCCTCATCCTCAAAGATATTGCCGTAC | + |
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Preference number: 6 (lower is better) Translates to: FWQRSFGKMDCL*NRSSSSKILPY Trigger: GTACGGCAATATCTTTGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS CAA 72 bp | GGCTGTCCAGAGTATCCATTTGGAAGCACTATGTATTaGTTCACATTCCCTCCAATGGCATCCTCATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GCPEYPFGSTMY*FTFPPMASSFP Trigger: AGGAAATGAGGATGCCATTGGAGGGAATGTGAACAAATACATAGTGCTTCCAAATGGATACTCTGGACAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106587.9 ENSMUST00000106591.8 ENSMUST00000106592.8 |
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| CDS CAA 90 bp | CCTTTCTTGGGCTGTCCAGAGTATCCATTTGGAAGCACTATGTATTaGTTCACATTCCCTCCAATGGCATCCTCATTTCCTGTATCATTG | + |
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Preference number: 6 (lower is better) Translates to: PFLGCPEYPFGSTMY*FTFPPMASSFPVSL Trigger: CAATGATACAGGAAATGAGGATGCCATTGGAGGGAATGTGAACAAATACATAGTGCTTCCAAATGGATACTCTGGACAGCCCAAGAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106587.9 ENSMUST00000106591.8 ENSMUST00000106592.8 |
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| CDS CAA 72 bp | CTTTCAAAGCAAGCATCAAAGGTAAGATGTCCTTTCTaGGGCTGTCCAGAGTATCCATTTGGAAGCACTATG | + |
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Preference number: 6 (lower is better) Translates to: LSKQASKVRCPF*GCPEYPFGSTM Trigger: CATAGTGCTTCCAAATGGATACTCTGGACAGCCCAAGAAAGGACATCTTACCTTTGATGCTTGCTTTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106587.9 ENSMUST00000106591.8 ENSMUST00000106592.8 |
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| CDS CAA 72 bp | ATTCTGGCAAAGGAGTTTTGGAAAAATGGACTGCCTTaGGAACCGTTCCTCATCCTCAAAGATATTGCCGTA | + |
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Preference number: 6 (lower is better) Translates to: ILAKEFWKNGLP*EPFLILKDIAV Trigger: TACGGCAATATCTTTGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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| CDS CAA 90 bp | TTGAAAATTACCCTCTGCAATTCTTTCACATTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGTGGATTACAGGTGTCCGGCCTAATG | + |
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Preference number: 6 (lower is better) Translates to: LKITLCNSFTFSTVK*NQTRKRGLQVSGLM Trigger: CATTAGGCCGGACACCTGTAATCCACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAATGTGAAAGAATTGCAGAGGGTAATTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106589.9 ENSMUST00000106591.8 ENSMUST00000106592.8 |
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| CDS GCA 72 bp | AAACTGGTAGATATCATCTTCTCGGTCAAAACAGAATaGAAAGGACATCACATAGTTCTTCCTGTGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: KLVDIIFSVKTE*KGHHIVLPVVW Trigger: CCAGACCACAGGAAGAACTATGTGATGTCCTTTGCATTCTGTTTTGACCGAGAAGATGATATCTACCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106591.8 ENSMUST00000106592.8 |
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| CDS CAA 90 bp | AGGTTACCACTTTCAAAGCAAGCATCAAAGGTAAGATGTCCTTTCTaGGGCTGTCCAGAGTATCCATTTGGAAGCACTATGTATTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RLPLSKQASKVRCPF*GCPEYPFGSTMYLF Trigger: GAACAAATACATAGTGCTTCCAAATGGATACTCTGGACAGCCCAAGAAAGGACATCTTACCTTTGATGCTTGCTTTGAAAGTGGTAACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106587.9 ENSMUST00000106591.8 ENSMUST00000106592.8 |
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| CDS CCA 72 bp | TTATCTTCAGGGAGTTGCTCCAGCTCTGATCCTTATTaGACAAAAGAGGCAACTGCAATTCTTTCACATTTT | + |
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Preference number: 6 (lower is better) Translates to: LSSGSCSSSDPY*TKEATAILSHF Trigger: AAAATGTGAAAGAATTGCAGTTGCCTCTTTTGTCCAATAAGGATCAGAGCTGGAGCAACTCCCTGAAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106587.9 |
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| CDS CCA 72 bp | AGCGTGGATGTCAATATAGAACTCCAGGCTTGTTTTTaGGTCATTGTACATCTTGATAATAAGCTGTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SVDVNIELQACF*VIVHLDNKLFH Trigger: GTGAAACAGCTTATTATCAAGATGTACAATGACCCAAAAACAAGCCTGGAGTTCTATATTGACATCCACGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000080744.13 ENSMUST00000097920.9 ENSMUST00000106592.8 ENSMUST00000148038.2 |
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