Pregenerated sensors for AFTPH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049659Ensembl transcript IDs: ENSMUST00000035350.12, ENSMUST00000146722.9, ENSMUST00000176782.2, ENSMUST00000177014.8, ENSMUST00000177543.8
Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGGCTGGGAACATCAACACCTTGGCATGCATGAAGGTCAGGTCTaGAAGGCTGGCGATCACCTTCATGGCTTCCTCACTCAGGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SGWEHQHLGMHEGQV*KAGDHLHGFLTQVL Trigger: GAGCACCTGAGTGAGGAAGCCATGAAGGTGATCGCCAGCCTTCCAGACCTGACCTTCATGCATGCCAAGGTGTTGATGTTCCCAGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR TCA 90 bp | TGGAAGGTGTCAGAGTGGCTGGGAACATCAACACCTTGGCATGCATaGAGGTCAGGTCTGGAAGGCTGGCGATCACCTTCATGGCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: WKVSEWLGTSTPWHA*RSGLEGWRSPSWLP Trigger: AGGAAGCCATGAAGGTGATCGCCAGCCTTCCAGACCTGACCTTCATGCATGCCAAGGTGTTGATGTTCCCAGCCACTCTGACACCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR CCA 90 bp | CGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTaGGAACATCAACACCTTGGCATGCATGAAGGTCAGGTCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RVCLFLGAHGRCQSG*EHQHLGMHEGQVWK Trigger: CTTCCAGACCTGACCTTCATGCATGCCAAGGTGTTGATGTTCCCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR CCA 90 bp | CGATGGATGCAAGCAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATaGAAGGTGTCAGAGTGGCTGGGAACATCAACACCTTGGCATGCA | + |
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Preference number: 1 (lower is better) Translates to: RWMQAATRLLVLGSS*KVSEWLGTSTPWHA Trigger: TGCATGCCAAGGTGTTGATGTTCCCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTGCTTGCATCCATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR CCA 90 bp | TCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATaGCGTGACCTCAGAGAAGGTCACACAGCAGAACGCCTGATGAAG | + |
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Preference number: 1 (lower is better) Translates to: SCPDSDPHSTTSKHR*RDLREGHTAERLMK Trigger: CTTCATCAGGCGTTCTGCTGTGTGACCTTCTCTGAGGTCACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
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| 3UTR GCA 90 bp | AGGTCTGGAAGGCTGGCGATCACCTTCATGGCTTCCTCACTCAGGTaGTCCTCTCTTTTTGGTTTCCTGGTTGACGTGCTTGTCTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: RSGRLAITFMASSLR*SSLFGFLVDVLVFS Trigger: GGAAAAGACAAGCACGTCAACCAGGAAACCAAAAAGAGAGGAGCACCTGAGTGAGGAAGCCATGAAGGTGATCGCCAGCCTTCCAGACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR CCA 90 bp | GGCCCAAAGAAATCAAGGTTCAGGAGAGTGGAACCTCCACTAGCTTaGAATTCAGTGACCGTGTTGGTGGGCAGCCACACAGAAGGTAAG | + |
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Preference number: 1 (lower is better) Translates to: GPKKSRFRRVEPPLA*NSVTVLVGSHTEGK Trigger: CTTACCTTCTGTGTGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCACTCTCCTGAACCTTGATTTCTTTGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR GCA 90 bp | AAGGTGTATTTAAAACTGTCCGATGGATGCAAGCAGCTACGCGTCTaGTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: KVYLKLSDGCKQLRV*LFLGAHGRCQSGWE Trigger: TTCCCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTGCTTGCATCCATCGGACAGTTTTAAATACACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR TCA 90 bp | CATGGCTTCCTCACTCAGGTGCTCCTCTCTTTTTGGTTTCCTGGTTaGCGTGCTTGTCTTTTCCACTGTAGACATGAGCTTCGCAAATGC | + |
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Preference number: 1 (lower is better) Translates to: HGFLTQVLLSFWFPG*RACLFHCRHELRKC Trigger: GCATTTGCGAAGCTCATGTCTACAGTGGAAAAGACAAGCACGTCAACCAGGAAACCAAAAAGAGAGGAGCACCTGAGTGAGGAAGCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR CCA 90 bp | ATAGCAATTATAAATCAGGGTCCATGGGAAAGCCACAGCATGGACTaGAACACTAGCACTGTGTGTGAAAGTTCCTATGGTACTTGCATA | + |
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Preference number: 1 (lower is better) Translates to: IAIINQGPWESHSMD*NTSTVCESSYGTCI Trigger: TATGCAAGTACCATAGGAACTTTCACACACAGTGCTAGTGTTCCAGTCCATGCTGTGGCTTTCCCATGGACCCTGATTTATAATTGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR CCA 90 bp | GACAATGGCTCAATTAATTACATAGCAATTATAAATCAGGGTCCATaGGAAAGCCACAGCATGGACTGGAACACTAGCACTGTGTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: DNGSINYIAIINQGP*ESHSMDWNTSTVCE Trigger: TTCACACACAGTGCTAGTGTTCCAGTCCATGCTGTGGCTTTCCCATGGACCCTGATTTATAATTGCTATGTAATTAATTGAGCCATTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR TCA 90 bp | CATCTTCCATTTGCATATAAGTACTCTATAAAACGCTACAGAGTCTaGAGACTACATTACGTCATAATCTGGATCTATCTGCACACTGGT | + |
|
Preference number: 1 (lower is better) Translates to: HLPFAYKYSIKRYRV*RLHYVIIWIYLHTG Trigger: ACCAGTGTGCAGATAGATCCAGATTATGACGTAATGTAGTCTTCAGACTCTGTAGCGTTTTATAGAGTACTTATATGCAAATGGAAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR CAA 90 bp | TTCAGGAGAGTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTaGGTGGGCAGCCACACAGAAGGTAAGCCAAGGGAGGAGGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: FRRVEPPLAWNSVTV*VGSHTEGKPREEGL Trigger: TAACCCCTCCTCCCTTGGCTTACCTTCTGTGTGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCACTCTCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTTGGTGGGCAGCCATCAGGTCTGGAAGGCTaGCGATCACCTTCATGGCTT | + |
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Preference number: 2 (lower is better) Translates to: ESGTSTSLEFSDRVGGQPSGLEG*RSPSWL Trigger: AAGCCATGAAGGTGATCGCCAGCCTTCCAGACCTGA...TGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCACTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTTGGTGGGCAGCCACACAGCGTCTGCTTGTTCTTaGGAGCTCATGGAAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: VEPPLAWNSVTVLVGSHTASACS*ELMEGV Trigger: GACACCTTCCATGAGCTCCCAAGAACAAGCAGACGC...TGTGTGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR CAA 90 bp | GTGTATTTAAAACTGTCCGATGGATGCAAGCAGCTACGCGTCTGCTaGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGGAACAT | + |
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Preference number: 2 (lower is better) Translates to: VYLKLSDGCKQLRVC*FLGAHGRCQSGWEH Trigger: ATGTTCCCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTGCTTGCATCCATCGGACAGTTTTAAATACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR TCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTACACCTTGGCATGCATaGAGGTCAGGTCTGGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ITADMLLMVGKGWNQGRCTPWHA*RSGLEG Trigger: GCCTTCCAGACCTGACCTTCATGCATGCCAAGGTGT...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTTGGTGGGCAGCCACTGGTCTTGGTTAAGTaGATAATTGTGCTTTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ESGTSTSLEFSDRVGGQPLVLVK*IIVLCA Trigger: AGCACAAAGCACAATTATTCACTTAACCAAGACCAG...TGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTTGGTGGGCAGCCAAGGACATTCAATAGATaGTTTCCAGGTATCCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: ESGTSTSLEFSDRVGGQPRTFNR*FPGILG Trigger: TCCTAGGATACCTGGAAACCATCTATTGAATGTCCT...TGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGACCCATCACACACAACTaGAAAGCAAACAAGAATTTT | + |
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Preference number: 2 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRPITHN*KANKNF Trigger: AAAATTCTTGTTTGCTTTTCAGTTGTGTGTGATGGG...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
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| 3UTR-3UTR CCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTGGAAGGTGTCAGAGTaGCTGGGAACATCAACACCT | + |
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Preference number: 2 (lower is better) Translates to: YSRYAFDGREGVESRKVYWKVSE*LGTSTP Trigger: AGGTGTTGATGTTCCCAGCCACTCTGACACCTTCCA...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCTGAGGCTTGAGGTGGAGGTCTCCAGCTTAGCAGTTGTTAACTCATACAACAGAATGACAAAGTTGTaGGTTTCAGGACATGCACCA | + |
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Preference number: 2 (lower is better) Translates to: TLRLEVEVSSLAVVNSYNRMTKL*VSGHAP Trigger: TGGTGCATGTCCTGAAACTCACAACTTTGTCATTCT...GTTGTATGAGTTAACAACTGCTAAGCTGGAGACCTCCACCTCAAGCCTCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCATCAGGTCTGGAAGGCTaGCGATCACCTTCATGGCTT | + |
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Preference number: 2 (lower is better) Translates to: KKDTTSVFHKDINVYTPASGLEG*RSPSWL Trigger: AAGCCATGAAGGTGATCGCCAGCCTTCCAGACCTGA...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAAGGTGTCAGAGTGGCTaGGAACATCAACACCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: KDTTSVFHKDINVYTPATRCQSG*EHQHLG Trigger: GCCAAGGTGTTGATGTTCCCAGCCACTCTGACACCT...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAGCGTCTGCTTGTTCTTaGGAGCTCATGGAAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: KKDTTSVFHKDINVYTPAASACS*ELMEGV Trigger: GACACCTTCCATGAGCTCCCAAGAACAAGCAGACGC...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTCTTTTTGGTTTCCTGGTTGACGTGCTTGTCTTTTCCACTGTAGACATGATAAATCAGGGTCCATaGGAAAGCCACAGCATGGAC | + |
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Preference number: 2 (lower is better) Translates to: SSLFGFLVDVLVFSTVDMINQGP*ESHSMD Trigger: GTCCATGCTGTGGCTTTCCCATGGACCCTGATTTAT...CATGTCTACAGTGGAAAAGACAAGCACGTCAACCAGGAAACCAAAAAGAGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR TCA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAACACCTTGGCATGCATaGAGGTCAGGTCTGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LFLNYSRYAFDGREGVESTPWHA*RSGLEG Trigger: GCCTTCCAGACCTGACCTTCATGCATGCCAAGGTGT...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATATCAACACCTTGGCATaGATGAAGGTCAGGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: FDGREGVESRKVYLKLSDINTLA*MKVRSG Trigger: TCCAGACCTGACCTTCATGCATGCCAAGGTGTTGAT...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGTCTTAACCCAGCATGAAGTCACTACATGCCCCATCTTTCATGTTAGTTTCATCAACACCTTGGCATaGATGAAGGTCAGGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LVLTQHEVTTCPIFHVSFINTLA*MKVRSG Trigger: TCCAGACCTGACCTTCATGCATGCCAAGGTGTTGAT...GAAACTAACATGAAAGATGGGGCATGTAGTGACTTCATGCTGGGTTAAGACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR CCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGATATACCTTTCTAGTGTaGCTTACCAACAAATCATCT | + |
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Preference number: 2 (lower is better) Translates to: HTAERLMKTENKAQESERYTFLV*LTNKSS Trigger: AGATGATTTGTTGGTAAGCCACACTAGAAAGGTATA...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGAGGCTTGAGGTGGAGGTCTCCAGCTTAGCAGTTGTTAACTCATACAACTATACCTTTCTAGTGTaGCTTACCAACAAATCATCT | + |
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Preference number: 2 (lower is better) Translates to: TLRLEVEVSSLAVVNSYNYTFLV*LTNKSS Trigger: AGATGATTTGTTGGTAAGCCACACTAGAAAGGTATA...GTTGTATGAGTTAACAACTGCTAAGCTGGAGACCTCCACCTCAAGCCTCAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCAGGTGTCAGAGTGGCTaGGAACATCAACACCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: VFKKDTTSVFHKDINVYTRCQSG*EHQHLG Trigger: GCCAAGGTGTTGATGTTCCCAGCCACTCTGACACCT...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACATATACCTTTCTAGTGTaGCTTACCAACAAATCATCT | + |
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Preference number: 2 (lower is better) Translates to: KDTTSVFHKDINVYTPATYTFLV*LTNKSS Trigger: AGATGATTTGTTGGTAAGCCACACTAGAAAGGTATA...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAGGTATCTTGAGCAATTaGTATTTAGAAAGAAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LFLNYSRYAFDGREGVESGILSN*YLERKP Trigger: AGGCTTTCTTTCTAAATAGCAATTGCTCAAGATACC...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR TCA 72 bp | TCAGAGTGGCTGGGAACATCAACACCTTGGCATGCATaGAGGTCAGGTCTGGAAGGCTGGCGATCACCTTCA | + |
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Preference number: 3 (lower is better) Translates to: SEWLGTSTPWHA*RSGLEGWRSPS Trigger: TGAAGGTGATCGCCAGCCTTCCAGACCTGACCTTCATGCATGCCAAGGTGTTGATGTTCCCAGCCACTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR GCA 72 bp | AGGCTGGCGATCACCTTCATGGCTTCCTCACTCAGGTaGTCCTCTCTTTTTGGTTTCCTGGTTGACGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: RLAITFMASSLR*SSLFGFLVDVL Trigger: AAGCACGTCAACCAGGAAACCAAAAAGAGAGGAGCACCTGAGTGAGGAAGCCATGAAGGTGATCGCCAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR CCA 72 bp | GAACATCAACACCTTGGCATGCATGAAGGTCAGGTCTaGAAGGCTGGCGATCACCTTCATGGCTTCCTCACT | + |
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Preference number: 3 (lower is better) Translates to: EHQHLGMHEGQV*KAGDHLHGFLT Trigger: AGTGAGGAAGCCATGAAGGTGATCGCCAGCCTTCCAGACCTGACCTTCATGCATGCCAAGGTGTTGATGTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTTGGTGGGCAGCCACACAGTGAATAATTGTGCTTaGTGCTTTGGAGCAGCCGCT | + |
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Preference number: 3 (lower is better) Translates to: VEPPLAWNSVTVLVGSHTVNNCA*CFGAAA Trigger: AGCGGCTGCTCCAAAGCACAAAGCACAATTATTCAC...TGTGTGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR CCA 72 bp | TTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTaGGAACATCAACACCTTGGCATGCATGAAGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LFLGAHGRCQSG*EHQHLGMHEGQ Trigger: CTGACCTTCATGCATGCCAAGGTGTTGATGTTCCCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR CCA 72 bp | AAATCAAGGTTCAGGAGAGTGGAACCTCCACTAGCTTaGAATTCAGTGACCGTGTTGGTGGGCAGCCACACA | + |
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Preference number: 3 (lower is better) Translates to: KSRFRRVEPPLA*NSVTVLVGSHT Trigger: TGTGTGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCACTCTCCTGAACCTTGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR TCA 72 bp | ACACAGAAGGTAAGCCAAGGGAGGAGGGGTTACGTGTaGAAAGGGGTAAGACACACACTTGAACATGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: TQKVSQGRRGYV*KGVRHTLEHAG Trigger: ACCTGCATGTTCAAGTGTGTGTCTTACCCCTTTTCACACGTAACCCCTCCTCCCTTGGCTTACCTTCTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR CAA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATCAGCTACGCGTCTGCTaGTTCTTGGGAGCTCATGGA | + |
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Preference number: 3 (lower is better) Translates to: YSRYAFDGREGVESRKVYQLRVC*FLGAHG Trigger: TCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR-3UTR CAA 90 bp | GAGAGTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTTGGTGGGCAGCCATGGTATCTTGAGCAATaGCTATTTAGAAAGAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: ESGTSTSLEFSDRVGGQPWYLEQ*LFRKKA Trigger: GGCTTTCTTTCTAAATAGCAATTGCTCAAGATACCA...TGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTTGGTGGGCAGCCACACAAAAGAGCATGATGATTaGACTAAAGACACCAGACAA | + |
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Preference number: 3 (lower is better) Translates to: VEPPLAWNSVTVLVGSHTKEHDD*TKDTRQ Trigger: TTGTCTGGTGTCTTTAGTCAAATCATCATGCTCTTT...TGTGTGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATGGGAACATCAACACCTaGGCATGCATGAAGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: FDGREGVESRKVYLKLSDGNINT*ACMKVR Trigger: CCTGACCTTCATGCATGCCAAGGTGTTGATGTTCCC...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| 3UTR CCA 72 bp | ATAAATCAGGGTCCATGGGAAAGCCACAGCATGGACTaGAACACTAGCACTGTGTGTGAAAGTTCCTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: INQGPWESHSMD*NTSTVCESSYG Trigger: ACCATAGGAACTTTCACACACAGTGCTAGTGTTCCAGTCCATGCTGTGGCTTTCCCATGGACCCTGATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAATTGTGCTTTGTGCTTaGGAGCAGCCGCTAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: KKDTTSVFHKDINVYTPAIVLCA*EQPLAT Trigger: TGTGGCTAGCGGCTGCTCCAAAGCACAAAGCACAAT...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| 3UTR GCA 72 bp | GAAATTTACACACTCAAATCTCAAAACCCTTGGGCATaGACATCAACCTTGTTAGAGGCTCTTCTACATCTC | + |
|
Preference number: 3 (lower is better) Translates to: EIYTLKSQNPWA*TSTLLEALLHL Trigger: GAGATGTAGAAGAGCCTCTAACAAGGTTGATGTGCATGCCCAAGGGTTTTGAGATTTGAGTGTGTAAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| 3UTR CCA 72 bp | TCAATTAATTACATAGCAATTATAAATCAGGGTCCATaGGAAAGCCACAGCATGGACTGGAACACTAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: SINYIAIINQGP*ESHSMDWNTST Trigger: AGTGCTAGTGTTCCAGTCCATGCTGTGGCTTTCCCATGGACCCTGATTTATAATTGCTATGTAATTAATTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| 3UTR CAA 72 bp | GTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTaGGTGGGCAGCCACACAGAAGGTAAGCCAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VEPPLAWNSVTV*VGSHTEGKPRE Trigger: CTCCCTTGGCTTACCTTCTGTGTGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGCACAGTTTAGTTCCTTaGCTCTGGGGCCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWHSLVP*LWGLCC Trigger: ACAGCAAAGGCCCCAGAGTCAAGGAACTAAACTGTG...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGACTTCTTGTTGCTATGTaGGCCACCCCACTGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRLLVAM*ATPLVP Trigger: CGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAG...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGCTCTCTTGTTTTTGCTaGCGAGCTGTGTGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWLSCFC*RAVCLQ Trigger: CTGGAGACACACAGCTCGCCAGCAAAAACAAGAGAG...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| 3UTR CAA 72 bp | AAACTGTCCGATGGATGCAAGCAGCTACGCGTCTGCTaGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLSDGCKQLRVC*FLGAHGRCQSG Trigger: GCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTGCTTGCATCCATCGGACAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTTGGTGGGCAGCCATACGGCATGGATTTCTaGGACGCAGACCTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESGTSTSLEFSDRVGGQPYGMDF*DADLMF Trigger: GAACATCAGGTCTGCGTCTCAGAAATCCATGCCGTA...TGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCACTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGTTGGCTAGGACCTGCTaGACTGAAGTCTGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWLARTC*TEVCKI Trigger: GATTTTGCAGACTTCAGTTCAGCAGGTCCTAGCCAA...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTAGTCACTCTGAGGCTTaGGGTGGAGGTCTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRSHSEA*GGGLQL Trigger: AAGCTGGAGACCTCCACCTCAAGCCTCAGAGTGACT...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGAATGCATCAGTCACTCTaGGGCTTGAGGTGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRMHQSL*GLRWRS Trigger: AGACCTCCACCTCAAGCCTCAGAGTGACTGATGCAT...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTTGGTGGGCAGCCAGAGGCTTTTCACCGTTaGAGCTCTCTAACTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESGTSTSLEFSDRVGGQPEAFHR*SSLTAW Trigger: CCAAGCAGTTAGAGAGCTGCAACGGTGAAAAGCCTC...TGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGTTCCAATCTACAGCTTaGCTAGGACCTGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWFQSTA*LGPAEL Trigger: CAGTTCAGCAGGTCCTAGCCAAGCTGTAGATTGGAA...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | CCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTCAAACTGGACAGGTaGGAGAGACTCCTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PNHVLTVIHTPQPASIDGVKLDR*ERLLEW Trigger: CCATTCCAGGAGTCTCTCCCACCTGTCCAGTTTGAC...GCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | GTGCTTTGTGCTTTGGAGCAGCCGCTAGCCACAAGACTGTGTGTCCAAGAACAGGTCAAACTGGACAGGTaGGAGAGACTCCTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VLCALEQPLATRLCVQEQVKLDR*ERLLEW Trigger: CCATTCCAGGAGTCTCTCCCACCTGTCCAGTTTGAC...CTGTTCTTGGACACACAGTCTTGTGGCTAGCGGCTGCTCCAAAGCACAAAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGAAGGTGTCAGAGTGGCTaGGAACATCAACACCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRRCQSG*EHQHLG Trigger: GCCAAGGTGTTGATGTTCCCAGCCACTCTGACACCT...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATAGGTGTCAGAGTGGCTaGGAACATCAACACCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDRCQSG*EHQHLG Trigger: GCCAAGGTGTTGATGTTCCCAGCCACTCTGACACCT...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGAGCGTCTGCTTGTTCTTaGGAGCTCATGGAAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRASACS*ELMEGV Trigger: GACACCTTCCATGAGCTCCCAAGAACAAGCAGACGC...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| 3UTR CAA 72 bp | GAAATCAAGGTTCAGGAGAGTGGAACCTCCACTAGCTaGGAATTCAGTGACCGTGTTGGTGGGCAGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: EIKVQESGTSTS*EFSDRVGGQPH Trigger: GTGTGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCACTCTCCTGAACCTTGATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATAGGCTTCGATCCCTTTaGATCTGCCACATTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDRLRSL*ICHIVQ Trigger: CTGGACAATGTGGCAGATTCAAAGGGATCGAAGCCT...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGACACAGTTTAGTTCCTTaGCTCTGGGGCCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRHSLVP*LWGLCC Trigger: ACAGCAAAGGCCCCAGAGTCAAGGAACTAAACTGTG...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATTACGGCATGGATTTCTaGGACGCAGACCTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDYGMDF*DADLMF Trigger: GAACATCAGGTCTGCGTCTCAGAAATCCATGCCGTA...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTTCAGGTCTGGAAGGCTaGCGATCACCTTCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRSGLEG*RSPSWL Trigger: AAGCCATGAAGGTGATCGCCAGCCTTCCAGACCTGA...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTCACAGTTTAGTTCCTTaGCTCTGGGGCCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRHSLVP*LWGLCC Trigger: ACAGCAAAGGCCCCAGAGTCAAGGAACTAAACTGTG...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTTACGGCATGGATTTCTaGGACGCAGACCTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRYGMDF*DADLMF Trigger: GAACATCAGGTCTGCGTCTCAGAAATCCATGCCGTA...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGCTCCAAGCCTCAGACTaGATCCTTGAATTTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWLQASD*ILEFRN Trigger: GTTTCTAAATTCAAGGATTCAGTCTGAGGCTTGGAG...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAACACCTTGGCATGCATaGAGGTCAGGTCTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERTPWHA*RSGLEG Trigger: GCCTTCCAGACCTGACCTTCATGCATGCCAAGGTGT...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGCTGAAGAAACACTGTaGATCTTAGGGGTTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDAEETL*ILGVPR Trigger: TCTGGGAACCCCTAAGATGCACAGTGTTTCTTCAGC...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATACTAGTAACAAAGGGTaGAGTGGTGCCATTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDTSNKG*SGAIGC Trigger: ACAGCCAATGGCACCACTCCACCCTTTGTTACTAGT...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATTTCCAATCTACAGCTTaGCTAGGACCTGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDFQSTA*LGPAEL Trigger: CAGTTCAGCAGGTCCTAGCCAAGCTGTAGATTGGAA...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGAGTGACGTCACTCATTaGATCTTGAGTACTAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWSDVTH*ILSTSN Trigger: GTTACTAGTACTCAAGATTCAATGAGTGACGTCACT...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGAGGAGTCTTCAAAAGTaGCGTCACTCATTGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWRSLQK*RHSLNL Trigger: AAGATTCAATGAGTGACGTCACTTTTGAAGACTCCT...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATGACTCAGTCTCCTGCTaGTCCCCAAAGGCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YSRYAFDGREGVESRKVYDSVSC*SPKAAQ Trigger: TTGGGCTGCCTTTGGGGATCAGCAGGAGACTGAGTC...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGGCTTCTTATTGCCAGTaGATAGAATGTTTCGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWASYCQ*IECFEC Trigger: ACACTCGAAACATTCTATTCACTGGCAATAAGAAGC...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTTTGTGCTTTGGAGCAGCCGCTAGCCACAAGACTGTGTGTCCAAGAACAGCATTCCCAATCCTGCTaGATACATGGGCACTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLCALEQPLATRLCVQEQHSQSC*IHGHYN Trigger: GTTATAGTGCCCATGTATGCAGCAGGATTGGGAATG...CTGTTCTTGGACACACAGTCTTGTGGCTAGCGGCTGCTCCAAAGCACAAAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CCA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTAAACCATGTGCATCATaGATGTCCTGCAGTTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRKPCAS*MSCSSV Trigger: GACCGAACTGCAGGACATCCATGATGCACATGGTTT...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGAGAGACTCCTGGAATaGATCAGATGTACACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDERLLE*IRCTRV Trigger: AACACGTGTACATCTGATCCATTCCAGGAGTCTCTC...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGACTACTCCAGTCAAACTaGACAGGTGGGAGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERLLQSN*TGGRDS Trigger: GGAGTCTCTCCCACCTGTCCAGTTTGACTGGAGTAG...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGTAACAGACCATAGGACAGGTAAGTCAAGAGCTGTCAGGCACGGGGAATCAGGTCTGGAAGGCTaGCGATCACCTTCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKVTDHRTGKSRAVRHGESGLEG*RSPSWL Trigger: AAGCCATGAAGGTGATCGCCAGCCTTCCAGACCTGA...TTCCCCGTGCCTGACAGCTCTTGACTTACCTGTCCTATGGTCTGTTACTTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGACTCTGGATCCACACCTaGGATTGTGCTGCTGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERLWIHT*DCAAAR Trigger: TCTAGCAGCAGCACAATCCCAGGTGTGGATCCAGAG...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAACACACCCATCCTACACCAGAAGGGCTaGCTTCCGAAAACCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKTKPRKVNESQVLNTPILHQKG*LPKTHQ Trigger: TTGGTGGGTTTTCGGAAGTCAGCCCTTCTGGTGTAG...GATGGGTGTGTTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCAAAGAAATCAAGGTTCAGGAGAGTGGAACCTCCACTAGCTTGGAATTCAAGGCTTCGATCCCTTTaGATCTGCCACATTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPKKSRFRRVEPPLAWNSRLRSL*ICHIVQ Trigger: CTGGACAATGTGGCAGATTCAAAGGGATCGAAGCCT...TGAATTCCAAGCTAGTGGAGGTTCCACTCTCCTGAACCTTGATTTCTTTGGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATTCCTCATTGGTATCATaGCAAGTCACAAAGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDSSLVS*QVTKPF Trigger: GAATGGCTTTGTGACTTGTCATGATACCAATGAGGA...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATGACTCAGTCTCCTGCTaGTCCCCAAAGGCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FDGREGVESRKVYLKLSDDSVSC*SPKAAQ Trigger: TTGGGCTGCCTTTGGGGATCAGCAGGAGACTGAGTC...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCTCTTTTTGGTTTCCTGGTTGACGTGCTTGTCTTTTCCACTGTAGACATGCTTCTTGTTGCTATGTaGGCCACCCCACTGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: SSLFGFLVDVLVFSTVDMLLVAM*ATPLVP Trigger: CGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAG...CATGTCTACAGTGGAAAAGACAAGCACGTCAACCAGGAAACCAAAAAGAGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR GCA 90 bp | TATAGATGTAGTAACTGCCCTGCCCTGATGCACACGCTCTACTGTTCCCCTTTACAAAGGGTGGAGTGGTaGCATTGGCTGTACCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YRCSNCPALMHTLYCSPLQRVEW*HWLYQS Trigger: ACTTTGGTACAGCCAATGGCACCACTCCACCCTTTG...TAAAGGGGAACAGTAGAGCGTGTGCATCAGGGCAGGGCAGTTACTACATCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGACTGTCTGAACTGAAGTaGCTGGTTCCTGCAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERLSELK*LVPANG Trigger: GCCATTTGCAGGAACCAGGCACTTCAGTTCAGACAG...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | GTAAAAGTAACAGACCATAGGACAGGTAAGTCAAGAGCTGTCAGGCACGGGGAATGTGTCTCCAGCAAGTaGTTCAGGGAAGAAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKVTDHRTGKSRAVRHGECVSSK*FREETS Trigger: GGAGGTTTCTTCCCTGAAGCACTTGCTGGAGACACA...TTCCCCGTGCCTGACAGCTCTTGACTTACCTGTCCTATGGTCTGTTACTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGACTCTCTTGTTTTTGCTaGCGAGCTGTGTGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERLSCFC*RAVCLQ Trigger: CTGGAGACACACAGCTCGCCAGCAAAAACAAGAGAG...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | CTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAACACACCCATCGTCAAACTGGACAGGTaGGAGAGACTCCTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LKTKPRKVNESQVLNTPIVKLDR*ERLLEW Trigger: CCATTCCAGGAGTCTCTCCCACCTGTCCAGTTTGAC...GATGGGTGTGTTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | CTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAACACACCCATCCTACTCCAGTCAAACTaGACAGGTGGGAGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKTKPRKVNESQVLNTPILLQSN*TGGRDS Trigger: GGAGTCTCTCCCACCTGTCCAGTTTGACTGGAGTAG...GATGGGTGTGTTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTCTACACCAGAAGGGCTaGCTTCCGAAAACCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCLHQKG*LPKTHQ Trigger: TTGGTGGGTTTTCGGAAGTCAGCCCTTCTGGTGTAG...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATCTACACCAGAAGGGCTaGCTTCCGAAAACCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: YSRYAFDGREGVESRKVYLHQKG*LPKTHQ Trigger: TTGGTGGGTTTTCGGAAGTCAGCCCTTCTGGTGTAG...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGATTGGCTAGGACCTGCTaGACTGAAGTCTGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERLARTC*TEVCKI Trigger: GATTTTGCAGACTTCAGTTCAGCAGGTCCTAGCCAA...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAACTTCTTGTTGCTATGTaGGCCACCCCACTGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: LMKTENKAQESERKPGLKLLVAM*ATPLVP Trigger: CGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAG...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGAGCTTCTTATTGCCAGTaGATAGAATGTTTCGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRASYCQ*IECFEC Trigger: ACACTCGAAACATTCTATTCACTGGCAATAAGAAGC...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | CTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAACACACCCATCGAGGCTTTTCACCGTTaGAGCTCTCTAACTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKTKPRKVNESQVLNTPIEAFHR*SSLTAW Trigger: CCAAGCAGTTAGAGAGCTGCAACGGTGAAAAGCCTC...GATGGGTGTGTTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGAACCATTTTTCATGCTTaGAGCAGAATCATCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRTIFHA*SRIIQS Trigger: GCTTTGGATGATTCTGCTGCAAGCATGAAAAATGGT...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATTGTCACCATTTTTCATaGTTGCAGCAGAATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDCHHFS*LQQNHP Trigger: TGGATGATTCTGCTGCAAGCATGAAAAATGGTGACA...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | GGCCCAAAGAAATCAAGGTTCAGGAGAGTGGAACCTCCACTAGCTTGGAATTCAGCTGAAGAAACACTGTaGATCTTAGGGGTTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPKKSRFRRVEPPLAWNSAEETL*ILGVPR Trigger: TCTGGGAACCCCTAAGATGCACAGTGTTTCTTCAGC...TGAATTCCAAGCTAGTGGAGGTTCCACTCTCCTGAACCTTGATTTCTTTGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCACTATAACAGGTTaGTTCTTATTGCCAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDGTITG*FLLPVN Trigger: ATTCACTGGCAATAAGAAGCAACCTGTTATAGTGCC...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAATCAACACCTTGGCATaGATGAAGGTCAGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERINTLA*MKVRSG Trigger: TCCAGACCTGACCTTCATGCATGCCAAGGTGTTGAT...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | CCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCAGCTCTCTAACTGCTTaGTTTGGTGAACAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNHVLTVIHTPQPASIDGSSLTA*FGEQCS Trigger: AGAACATTGTTCACCAAACCAAGCAGTTAGAGAGCT...GCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | CTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAACACACCCATCCTCTCTTGTTTTTGCTaGCGAGCTGTGTGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTKPRKVNESQVLNTPILSCFC*RAVCLQ Trigger: CTGGAGACACACAGCTCGCCAGCAAAAACAAGAGAG...GATGGGTGTGTTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATCTACTCCAGTCAAACTaGACAGGTGGGAGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSRYAFDGREGVESRKVYLLQSN*TGGRDS Trigger: GGAGTCTCTCCCACCTGTCCAGTTTGACTGGAGTAG...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTTGGCGATCACCTTCATaGCTTCCTCACTCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCWRSPS*LPHSGA Trigger: AGCACCTGAGTGAGGAAGCCATGAAGGTGATCGCCA...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATAACTGCTTGGTTTGGTaGACAATGTTCTTATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: APNHVLTVIHTPQPASIDNCLVW*TMFLSV Trigger: AACTGATAAGAACATTGTTCACCAAACCAAGCAGTT...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATAGGCTTCGATCCCTTTaGATCTGCCACATTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSRYAFDGREGVESRKVYRLRSL*ICHIVQ Trigger: CTGGACAATGTGGCAGATTCAAAGGGATCGAAGCCT...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTAGTGACGTCACTCATTaGATCTTGAGTACTAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRSDVTH*ILSTSN Trigger: GTTACTAGTACTCAAGATTCAATGAGTGACGTCACT...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCCCAAATTCACTGTCTTaGCCATTTTTCAGTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PNHVLTVIHTPQPASIDGPNSLS*PFFSFE Trigger: CTCAAAACTGAAAAATGGTCAAGACAGTGAATTTGG...GCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAGACTCAGTCTCCTGCTaGTCCCCAAAGGCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKDSVSC*SPKAAQ Trigger: TTGGGCTGCCTTTGGGGATCAGCAGGAGACTGAGTC...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCCAAGAACAGTTCACAAAGGGAGGCTATAAAACATTCAAACAAATTGGTCGACTCAGTCTCCTGCTaGTCCCCAAAGGCAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VSKNSSQREAIKHSNKLVDSVSC*SPKAAQ Trigger: TTGGGCTGCCTTTGGGGATCAGCAGGAGACTGAGTC...GACCAATTTGTTTGAATGTTTTATAGCCTCCCTTTGTGAACTGTTCTTGGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAAGTCACTCTGAGGCTTaGGGTGGAGGTCTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATSHSEA*GGGLQL Trigger: AAGCTGGAGACCTCCACCTCAAGCCTCAGAGTGACT...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAAATGCATCAGTCACTCTaGGGCTTGAGGTGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LMKTENKAQESERKPGLKMHQSL*GLRWRS Trigger: AGACCTCCACCTCAAGCCTCAGAGTGACTGATGCAT...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAACACCTTGGCATGCATaGAGGTCAGGTCTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATTPWHA*RSGLEG Trigger: GCCTTCCAGACCTGACCTTCATGCATGCCAAGGTGT...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTCAAAGGGTGGAGTGGTaGCATTGGCTGTACCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCQRVEW*HWLYQS Trigger: ACTTTGGTACAGCCAATGGCACCACTCCACCCTTTG...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGACATTCCCAATCCTGCTaGATACATGGGCACTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERHSQSC*IHGHYN Trigger: GTTATAGTGCCCATGTATGCAGCAGGATTGGGAATG...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATCTCTCTTGTTTTTGCTaGCGAGCTGTGTGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSRYAFDGREGVESRKVYLSCFC*RAVCLQ Trigger: CTGGAGACACACAGCTCGCCAGCAAAAACAAGAGAG...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATGTCAAACTGGACAGGTaGGAGAGACTCCTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: FDGREGVESRKVYLKLSDVKLDR*ERLLEW Trigger: CCATTCCAGGAGTCTCTCCCACCTGTCCAGTTTGAC...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATCTACTCCAGTCAAACTaGACAGGTGGGAGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FDGREGVESRKVYLKLSDLLQSN*TGGRDS Trigger: GGAGTCTCTCCCACCTGTCCAGTTTGACTGGAGTAG...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAATGGCGATCACCTTCATaGCTTCCTCACTCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMKTENKAQESERKPGLKWRSPS*LPHSGA Trigger: AGCACCTGAGTGAGGAAGCCATGAAGGTGATCGCCA...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGACTCCAAGCCTCAGACTaGATCCTTGAATTTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERLQASD*ILEFRN Trigger: GTTTCTAAATTCAAGGATTCAGTCTGAGGCTTGGAG...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTCCAAATTCACTGTCTTaGCCATTTTTCAGTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRPNSLS*PFFSFE Trigger: CTCAAAACTGAAAAATGGTCAAGACAGTGAATTTGG...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTGGCTAGGACCTGCTaGACTGAAGTCTGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: YSRYAFDGREGVESRKVYLARTC*TEVCKI Trigger: GATTTTGCAGACTTCAGTTCAGCAGGTCCTAGCCAA...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAACAAAGGGTGGAGTGGTaGCATTGGCTGTACCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LMKTENKAQESERKPGLKQRVEW*HWLYQS Trigger: ACTTTGGTACAGCCAATGGCACCACTCCACCCTTTG...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAATGTGTCTCCAGCAAGTaGTTCAGGGAAGAAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMKTENKAQESERKPGLKCVSSK*FREETS Trigger: GGAGGTTTCTTCCCTGAAGCACTTGCTGGAGACACA...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATTGTGTCTCCAGCAAGTaGTTCAGGGAAGAAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FDGREGVESRKVYLKLSDCVSSK*FREETS Trigger: GGAGGTTTCTTCCCTGAAGCACTTGCTGGAGACACA...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTACTAGTAACAAAGGGTaGAGTGGTGCCATTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCTSNKG*SGAIGC Trigger: ACAGCCAATGGCACCACTCCACCCTTTGTTACTAGT...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCACCTGGTTCCTGCAAATaGCCACTAGCAACTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPAPGSCK*PLATAP Trigger: AGGAGCAGTTGCTAGTGGCCATTTGCAGGAACCAGG...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACCTGGTTCCTGCAAATaGCCACTAGCAACTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATPGSCK*PLATAP Trigger: AGGAGCAGTTGCTAGTGGCCATTTGCAGGAACCAGG...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTAAACCATGTGCATCATaGATGTCCTGCAGTTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCKPCAS*MSCSSV Trigger: GACCGAACTGCAGGACATCCATGATGCACATGGTTT...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAGTTTTAATGGTTCCTTaGTGGGCTCTAACATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERVLMVP*WALTFP Trigger: TGGGAATGTTAGAGCCCACCAAGGAACCATTAAAAC...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAGGCTTGAGGTGGAGGTCTCCAGCTTAGCAGTTGTTAACTCATACAACGTTTTAATGGTTCCTTaGTGGGCTCTAACATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLRLEVEVSSLAVVNSYNVLMVP*WALTFP Trigger: TGGGAATGTTAGAGCCCACCAAGGAACCATTAAAAC...GTTGTATGAGTTAACAACTGCTAAGCTGGAGACCTCCACCTCAAGCCTCAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAATGGAAGGTGTCAGAGTaGCTGGGAACATCAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: LMKTENKAQESERKPGLKWKVSE*LGTSTP Trigger: AGGTGTTGATGTTCCCAGCCACTCTGACACCTTCCA...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGATGGCATAAAGTGGTTTaGAGGTACAAAGTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERWHKVV*RYKVFL Trigger: AAGGAAGACTTTGTACCTTCAAACCACTTTATGCCA...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACACAGTTTAGTTCCTTaGCTCTGGGGCCTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATHSLVP*LWGLCC Trigger: ACAGCAAAGGCCCCAGAGTCAAGGAACTAAACTGTG...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATTTGGCTAGGACCTGCTaGACTGAAGTCTGCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FDGREGVESRKVYLKLSDLARTC*TEVCKI Trigger: GATTTTGCAGACTTCAGTTCAGCAGGTCCTAGCCAA...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCACTTCTTGTTGCTATGTaGGCCACCCCACTGGTACCG | + |
|
Preference number: 4 (lower is better) Translates to: LFLNYSRYAFDGREGVESLLVAM*ATPLVP Trigger: CGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAG...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR GCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAGAGGCTTTTCACCGTTaGAGCTCTCTAACTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATEAFHR*SSLTAW Trigger: CCAAGCAGTTAGAGAGCTGCAACGGTGAAAAGCCTC...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR GCA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAAGCTGAAGAAACACTGTaGATCTTAGGGGTTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMKTENKAQESERKPGLKAEETL*ILGVPR Trigger: TCTGGGAACCCCTAAGATGCACAGTGTTTCTTCAGC...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACTGTCTGAACTGAAGTaGCTGGTTCCTGCAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATLSELK*LVPANG Trigger: GCCATTTGCAGGAACCAGGCACTTCAGTTCAGACAG...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACATGTGTCTCCAGCAAGTaGTTCAGGGAAGAAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATCVSSK*FREETS Trigger: GGAGGTTTCTTCCCTGAAGCACTTGCTGGAGACACA...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATACAAAAGCTTCTTGTTaGTATGTGAGCCACCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: YSRYAFDGREGVESRKVYTKASC*YVSHPT Trigger: AGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGT...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR GCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTACAAAAGCTTCTTGTTaGTATGTGAGCCACCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCTKASC*YVSHPT Trigger: AGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGT...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATAAACCATGTGCATCATaGATGTCCTGCAGTTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FDGREGVESRKVYLKLSDKPCAS*MSCSSV Trigger: GACCGAACTGCAGGACATCCATGATGCACATGGTTT...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTGAGAGACTCCTGGAATaGATCAGATGTACACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCERLLE*IRCTRV Trigger: AACACGTGTACATCTGATCCATTCCAGGAGTCTCTC...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACATGGAAGGTGTCAGAGTaGCTGGGAACATCAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATWKVSE*LGTSTP Trigger: AGGTGTTGATGTTCCCAGCCACTCTGACACCTTCCA...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
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| CDS-3UTR TCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAATACGGCATGGATTTCTaGGACGCAGACCTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKYGMDF*DADLMF Trigger: GAACATCAGGTCTGCGTCTCAGAAATCCATGCCGTA...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAACTAGTAACAAAGGGTaGAGTGGTGCCATTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATTSNKG*SGAIGC Trigger: ACAGCCAATGGCACCACTCCACCCTTTGTTACTAGT...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACTAGTAACAAAGGGTaGAGTGGTGCCATTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPATSNKG*SGAIGC Trigger: ACAGCCAATGGCACCACTCCACCCTTTGTTACTAGT...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTTTAATGGTTCCTTGGTaGGCTCTAACATTCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCLMVPW*ALTFPI Trigger: GATTGGGAATGTTAGAGCCCACCAAGGAACCATTAA...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAATGGTTCCTTGGTaGGCTCTAACATTCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: YSRYAFDGREGVESRKVYLMVPW*ALTFPI Trigger: GATTGGGAATGTTAGAGCCCACCAAGGAACCATTAA...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAGCGTCTGCTTGTTCTTaGGAGCTCATGGAAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLNYSRYAFDGREGVESASACS*ELMEGV Trigger: GACACCTTCCATGAGCTCCCAAGAACAAGCAGACGC...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAGAGGCTTTTCACCGTTaGAGCTCTCTAACTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLNYSRYAFDGREGVESEAFHR*SSLTAW Trigger: CCAAGCAGTTAGAGAGCTGCAACGGTGAAAAGCCTC...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTGTCACCATTTTTCATaGTTGCAGCAGAATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSRYAFDGREGVESRKVYCHHFS*LQQNHP Trigger: TGGATGATTCTGCTGCAAGCATGAAAAATGGTGACA...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGCAGAACGCCTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGACTAAGATGTAGAAAATaGTCTGAGGAGTCTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTAERLMKTENKAQESERLRCRK*SEESSK Trigger: TTTTGAAGACTCCTCAGAGCATTTTCTACATCTTAG...TCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAGGCGTTCTGCTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAGCTGAAGAAACACTGTaGATCTTAGGGGTTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKAEETL*ILGVPR Trigger: TCTGGGAACCCCTAAGATGCACAGTGTTTCTTCAGC...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCACTGTCTGAACTGAAGTaGCTGGTTCCTGCAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFLNYSRYAFDGREGVESLSELK*LVPANG Trigger: GCCATTTGCAGGAACCAGGCACTTCAGTTCAGACAG...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAAAAGCTTCTTGTTaGTATGTGAGCCACCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPATKASC*YVSHPT Trigger: AGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGT...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCACATTCCCAATCCTGCTaGATACATGGGCACTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPAHSQSC*IHGHYN Trigger: GTTATAGTGCCCATGTATGCAGCAGGATTGGGAATG...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTAGCTCTCTAACTGCTTaGTTTGGTGAACAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCSSLTA*FGEQCS Trigger: AGAACATTGTTCACCAAACCAAGCAGTTAGAGAGCT...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAATTCCAATCTACAGCTTaGCTAGGACCTGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKFQSTA*LGPAEL Trigger: CAGTTCAGCAGGTCCTAGCCAAGCTGTAGATTGGAA...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAAGTTTTAATGGTTCCTTaGTGGGCTCTAACATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LMKTENKAQESERKPGLKVLMVP*WALTFP Trigger: TGGGAATGTTAGAGCCCACCAAGGAACCATTAAAAC...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATGTTTTAATGGTTCCTTaGTGGGCTCTAACATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FDGREGVESRKVYLKLSDVLMVP*WALTFP Trigger: TGGGAATGTTAGAGCCCACCAAGGAACCATTAAAAC...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAGAGAGACTCCTGGAATaGATCAGATGTACACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPAERLLE*IRCTRV Trigger: AACACGTGTACATCTGATCCATTCCAGGAGTCTCTC...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTAGTACAACATCAGATTaGCTTTTCACAGGAGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCSTTSD*LFTGVE Trigger: TTCTACTCCTGTGAAAAGTCAATCTGATGTTGTACT...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATAACTGCTTGGTTTGGTaGACAATGTTCTTATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSRYAFDGREGVESRKVYNCLVW*TMFLSV Trigger: AACTGATAAGAACATTGTTCACCAAACCAAGCAGTT...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACTCCAAGCCTCAGACTaGATCCTTGAATTTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATLQASD*ILEFRN Trigger: GTTTCTAAATTCAAGGATTCAGTCTGAGGCTTGGAG...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCATCCTCATTGGTATCATaGCAAGTCACAAAGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPASSLVS*QVTKPF Trigger: GAATGGCTTTGTGACTTGTCATGATACCAATGAGGA...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACATCCTCATTGGTATCATaGCAAGTCACAAAGCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATSSLVS*QVTKPF Trigger: GAATGGCTTTGTGACTTGTCATGATACCAATGAGGA...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTTCACTCATTGAATCTTaGGTACTAGTAACAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCSLIES*VLVTKG Trigger: ACCCTTTGTTACTAGTACTCAAGATTCAATGAGTGA...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTCCAAATTCACTGTCTTaGCCATTTTTCAGTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCPNSLS*PFFSFE Trigger: CTCAAAACTGAAAAATGGTCAAGACAGTGAATTTGG...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATTGTCACCATTTTTCATaGTTGCAGCAGAATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FDGREGVESRKVYLKLSDCHHFS*LQQNHP Trigger: TGGATGATTCTGCTGCAAGCATGAAAAATGGTGACA...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACATTCCCAATCCTGCTaGATACATGGGCACTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKHSQSC*IHGHYN Trigger: GTTATAGTGCCCATGTATGCAGCAGGATTGGGAATG...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAGTACAAAGTCTTCCTTaGGACGAGTATAATCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATVQSLP*DEYNLV Trigger: CACCAGATTATACTCGTCCCAAGGAAGACTTTGTAC...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTACTACCTTGAGTATTTaGCACAGAATCAAAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCTTLSI*HRIKIS Trigger: GGAGATTTTGATTCTGTGCCAAATACTCAAGGTAGT...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCATTAATGGTTCCTTGGTaGGCTCTAACATTCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPALMVPW*ALTFPI Trigger: GATTGGGAATGTTAGAGCCCACCAAGGAACCATTAA...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACATTAATGGTTCCTTGGTaGGCTCTAACATTCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATLMVPW*ALTFPI Trigger: GATTGGGAATGTTAGAGCCCACCAAGGAACCATTAA...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCATGGCATAAAGTGGTTTaGAGGTACAAAGTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPAWHKVV*RYKVFL Trigger: AAGGAAGACTTTGTACCTTCAAACCACTTTATGCCA...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AAATCTCAAAACCCTTGGGCATGCACATCAACCTTGTTAGAGGCTCTTCTACATAGTACAACATCAGATTaGCTTTTCACAGGAGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSQNPWACTSTLLEALLHSTTSD*LFTGVE Trigger: TTCTACTCCTGTGAAAAGTCAATCTGATGTTGTACT...ATGTAGAAGAGCCTCTAACAAGGTTGATGTGCATGCCCAAGGGTTTTGAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR TCA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATAACTGCTTGGTTTGGTaGACAATGTTCTTATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FDGREGVESRKVYLKLSDNCLVW*TMFLSV Trigger: AACTGATAAGAACATTGTTCACCAAACCAAGCAGTT...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR TCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTCCAAGCCTCAGACTaGATCCTTGAATTTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKLQASD*ILEFRN Trigger: GTTTCTAAATTCAAGGATTCAGTCTGAGGCTTGGAG...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AAATCTCAAAACCCTTGGGCATGCACATCAACCTTGTTAGAGGCTCTTCTACATTCACTCATTGAATCTTaGGTACTAGTAACAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSQNPWACTSTLLEALLHSLIES*VLVTKG Trigger: ACCCTTTGTTACTAGTACTCAAGATTCAATGAGTGA...ATGTAGAAGAGCCTCTAACAAGGTTGATGTGCATGCCCAAGGGTTTTGAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
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| CDS-3UTR TCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAAGTGACGTCACTCATTaGATCTTGAGTACTAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPASDVTH*ILSTSN Trigger: GTTACTAGTACTCAAGATTCAATGAGTGACGTCACT...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAGCTTCTTATTGCCAGTaGATAGAATGTTTCGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPAASYCQ*IECFEC Trigger: ACACTCGAAACATTCTATTCACTGGCAATAAGAAGC...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR GCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACATGTCACCATTTTTCATaGTTGCAGCAGAATCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATCHHFS*LQQNHP Trigger: TGGATGATTCTGCTGCAAGCATGAAAAATGGTGACA...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR GCA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTCTAAGATGTAGAAAATaGTCTGAGGAGTCTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ITADMLLMVGKGWNQGRCLRCRK*SEESSK Trigger: TTTTGAAGACTCCTCAGAGCATTTTCTACATCTTAG...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR GCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAGGCACTATAACAGGTTaGTTCTTATTGCCAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATGTITG*FLLPVN Trigger: ATTCACTGGCAATAAGAAGCAACCTGTTATAGTGCC...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR GCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAGGCACTATAACAGGTTaGTTCTTATTGCCAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPAGTITG*FLLPVN Trigger: ATTCACTGGCAATAAGAAGCAACCTGTTATAGTGCC...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAAGGGACGAGTATAATCTaGTGTGTCAAAATCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMKTENKAQESERKPGLKGTSII*CVKINK Trigger: TTTGTTGATTTTGACACACCAGATTATACTCGTCCC...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAAGCTCTCTAACTGCTTaGTTTGGTGAACAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPASSLTA*FGEQCS Trigger: AGAACATTGTTCACCAAACCAAGCAGTTAGAGAGCT...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCTTCCAATCTACAGCTTaGCTAGGACCTGCTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VFKKDTTSVFHKDINVYTFQSTA*LGPAEL Trigger: CAGTTCAGCAGGTCCTAGCCAAGCTGTAGATTGGAA...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCAAACCATGTGCATCATaGATGTCCTGCAGTTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFKKDTTSVFHKDINVYTKPCAS*MSCSSV Trigger: GACCGAACTGCAGGACATCCATGATGCACATGGTTT...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS-3UTR CCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAGTGCTCCTCTCTTTTTaGTTTCCATCTAAAGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPAVLLSF*FPSKGL Trigger: TAACCCTTTAGATGGAAACCAAAAAGAGAGGAGCAC...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAAGTACAACATCAGATTaGCTTTTCACAGGAGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPASTTSD*LFTGVE Trigger: TTCTACTCCTGTGAAAAGTCAATCTGATGTTGTACT...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
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| CDS-3UTR TCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAAACTGCTTGGTTTGGTaGACAATGTTCTTATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPANCLVW*TMFLSV Trigger: AACTGATAAGAACATTGTTCACCAAACCAAGCAGTT...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACATCACTCATTGAATCTTaGGTACTAGTAACAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KDTTSVFHKDINVYTPATSLIES*VLVTKG Trigger: ACCCTTTGTTACTAGTACTCAAGATTCAATGAGTGA...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAAGGAGTCTTCAAAAGTaGCGTCACTCATTGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKRSLQK*RHSLNL Trigger: AAGATTCAATGAGTGACGTCACTTTTGAAGACTCCT...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAGCTTCTTATTGCCAGTaGATAGAATGTTTCGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKASYCQ*IECFEC Trigger: ACACTCGAAACATTCTATTCACTGGCAATAAGAAGC...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | AAATCTCAAAACCCTTGGGCATGCACATCAACCTTGTTAGAGGCTCTTCTACATCTAAGATGTAGAAAATaGTCTGAGGAGTCTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSQNPWACTSTLLEALLHLRCRK*SEESSK Trigger: TTTTGAAGACTCCTCAGAGCATTTTCTACATCTTAG...ATGTAGAAGAGCCTCTAACAAGGTTGATGTGCATGCCCAAGGGTTTTGAGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCACAAAAGCTTCTTGTTaGTATGTGAGCCACCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VFKKDTTSVFHKDINVYTTKASC*YVSHPT Trigger: AGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGT...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAGGGACGAGTATAATCTaGTGTGTCAAAATCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPAGTSII*CVKINK Trigger: TTTGTTGATTTTGACACACCAGATTATACTCGTCCC...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAGTACAAAGTCTTCCTTaGGACGAGTATAATCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFLNYSRYAFDGREGVESVQSLP*DEYNLV Trigger: CACCAGATTATACTCGTCCCAAGGAAGACTTTGTAC...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACTACCTTGAGTATTTaGCACAGAATCAAAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKDTTSVFHKDINVYTPATTLSI*HRIKIS Trigger: GGAGATTTTGATTCTGTGCCAAATACTCAAGGTAGT...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAATCACTCATTGAATCTTaGGTACTAGTAACAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKSLIES*VLVTKG Trigger: ACCCTTTGTTACTAGTACTCAAGATTCAATGAGTGA...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAAATGAAAAGTATCAGAAAGACCAGAGAAGGCACACTAGTTAAAGGGAAAGGCACTATAACAGGTTaGTTCTTATTGCCAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKMKSIRKTREGTLVKGKGTITG*FLLPVN Trigger: ATTCACTGGCAATAAGAAGCAACCTGTTATAGTGCC...TTTCCCTTTAACTAGTGTGCCTTCTCTGGTCTTTCTGATACTTTTCATTTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAGGGACGAGTATAATCTaGTGTGTCAAAATCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKGTSII*CVKINK Trigger: TTTGTTGATTTTGACACACCAGATTATACTCGTCCC...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCAGGAGTCTTCAAAAGTaGCGTCACTCATTGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFKKDTTSVFHKDINVYTRSLQK*RHSLNL Trigger: AAGATTCAATGAGTGACGTCACTTTTGAAGACTCCT...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR GCA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTAAGATGTAGAAAATaGTCTGAGGAGTCTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RYAFDGREGVESRKVYLKLRCRK*SEESSK Trigger: TTTTGAAGACTCCTCAGAGCATTTTCTACATCTTAG...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCAGCTCTCTAACTGCTTaGTTTGGTGAACAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFKKDTTSVFHKDINVYTSSLTA*FGEQCS Trigger: AGAACATTGTTCACCAAACCAAGCAGTTAGAGAGCT...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAACTACCTTGAGTATTTaGCACAGAATCAAAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLNYSRYAFDGREGVESTTLSI*HRIKIS Trigger: GGAGATTTTGATTCTGTGCCAAATACTCAAGGTAGT...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS GCA 90 bp | GAGCCACCCCACTGGTACCGCAAACCATGTGCATCATGGATGTCCTaGAGTTCGGTCCATACACCCCTCAACTCACCACGGTCAGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: EPPHWYRKPCASWMS*SSVHTPLNSPRSAK Trigger: CTTAGCTGACCGTGGTGAGTTGAGGGGTGTATGGACCGAACTGCAGGACATCCATGATGCACATGGTTTGCGGTACCAGTGGGGTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS CCA 90 bp | TTGCTATGTGAGCCACCCCACTGGTACCGCAAACCATGTGCATCATaGATGTCCTGCAGTTCGGTCCATACACCCCTCAACTCACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: LLCEPPHWYRKPCAS*MSCSSVHTPLNSPR Trigger: CCGTGGTGAGTTGAGGGGTGTATGGACCGAACTGCAGGACATCCATGATGCACATGGTTTGCGGTACCAGTGGGGTGGCTCACATAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGAGAGAAACTTCTGAGTaGCCCAGTGCTTGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWRETSE*PSAWSL Trigger: CAGGGACCAAGCACTGGGCAACTCAGAAGTTTCTCT...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGGGAGGCTTTTCACCGTaGCAGCTCTCTAACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWGGFSP*QLSNCL Trigger: CAAGCAGTTAGAGAGCTGCAACGGTGAAAAGCCTCC...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGCAGCTAAGGCCTCTCTaGTTTTTGCTGGCGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWQLRPL*FLLASC Trigger: ACAGCTCGCCAGCAAAAACAAGAGAGGCCTTAGCTG...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGGAGGCTTCGATCCCTTaGAATCTGCCACATTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWEASIP*NLPHCP Trigger: TGGACAATGTGGCAGATTCAAAGGGATCGAAGCCTC...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGGAGCACAAAAGCTTCTaGTTGCTATGTGAGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWEHKSF*LLCEPP Trigger: GGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTC...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS CCA 90 bp | CCCAAGGAGCACAAAAGCTTCTTGTTGCTATGTGAGCCACCCCACTaGTACCGCAAACCATGTGCATCATGGATGTCCTGCAGTTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PKEHKSFLLLCEPPH*YRKPCASWMSCSSV Trigger: GACCGAACTGCAGGACATCCATGATGCACATGGTTTGCGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTCCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATAGAGAAACTTCTGAGTaGCCCAGTGCTTGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: APNHVLTVIHTPQPASIDRETSE*PSAWSL Trigger: CAGGGACCAAGCACTGGGCAACTCAGAAGTTTCTCT...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATCAGCTAAGGCCTCTCTaGTTTTTGCTGGCGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: APNHVLTVIHTPQPASIDQLRPL*FLLASC Trigger: ACAGCTCGCCAGCAAAAACAAGAGAGGCCTTAGCTG...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS TCA 90 bp | CTGAGCCCTCTGTCAGCTACGGCATGGATTTCTGAGACGCAGACCTaGTGTTCTCTTTCAGTGTTCCCCGTATCCTCAAAGCTTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LSPLSATAWISETQT*CSLSVFPVSSKLPS Trigger: GGATGGAAGCTTTGAGGATACGGGGAACACTGAAAGAGAACATCAGGTCTGCGTCTCAGAAATCCATGCCGTAGCTGACAGAGGGCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTCAGCTAAGGCCTCTCTaGTTTTTGCTGGCGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRQLRPL*FLLASC Trigger: ACAGCTCGCCAGCAAAAACAAGAGAGGCCTTAGCTG...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | CCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCCACAAAAGCTTCTTGTaGCTATGTGAGCCACCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PNHVLTVIHTPQPASIDGHKSFL*LCEPPH Trigger: GTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTG...GCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTGGTGCTCCTCTCTTTTaGGTTTCCTGGTTGACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRGAPLF*VSWLTC Trigger: GCACGTCAACCAGGAAACCAAAAAGAGAGGAGCACC...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS TCA 90 bp | TGGTTCCTGCAAATGGCCACTAGCAACTGCTCCTTTGGAAGCTGCTaGAGAAACACTGTGCATCTTAGGGGTTCCCAGAGTGCCCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: WFLQMATSNCSFGSC*RNTVHLRGSQSAHS Trigger: ACTATGGGCACTCTGGGAACCCCTAAGATGCACAGTGTTTCTTCAGCAGCTTCCAAAGGAGCAGTTGCTAGTGGCCATTTGCAGGAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000176782.2 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS GCA 90 bp | TGGCCACTAGCAACTGCTCCTTTGGAAGCTGCTGAAGAAACACTGTaGATCTTAGGGGTTCCCAGAGTGCCCATAGTTTCATCTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WPLATAPLEAAEETL*ILGVPRVPIVSSVL Trigger: GAGGACAGATGAAACTATGGGCACTCTGGGAACCCCTAAGATGCACAGTGTTTCTTCAGCAGCTTCCAAAGGAGCAGTTGCTAGTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000176782.2 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTTCAGGGTCTGGGCTTTaGGGATTAGTCAGCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRSGSGL*GLVSFL Trigger: CAGAAAGCTGACTAATCCCAAAAGCCCAGACCCTGA...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTACGCGTCTGCTTGTTCTTGGGAGCTCATGGAAGGTGTCAGAGTGGCTGGCACCATTTTTCATGCTaGCAGCAGAATCATCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QLRVCLFLGAHGRCQSGWHHFSC*QQNHPK Trigger: CTTTGGATGATTCTGCTGCAAGCATGAAAAATGGTG...CCAGCCACTCTGACACCTTCCATGAGCTCCCAAGAACAAGCAGACGCGTAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS TCA 90 bp | TCGAGTGTCTATTCCCAAGGAGCACAAAAGCTTCTTGTTGCTATGTaGGCCACCCCACTGGTACCGCAAACCATGTGCATCATGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVYSQGAQKLLVAM*ATPLVPQTMCIMDV Trigger: GACATCCATGATGCACATGGTTTGCGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTCCTTGGGAATAGACACTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS CCA 90 bp | ACACCATCTAAAGGGTTAGTAAGGCCACTGCTACTCCAGTCAAACTaGACAGGTGGGAGAGACTCCTGGAATGGATCAGATGTACACGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPSKGLVRPLLLQSN*TGGRDSWNGSDVHV Trigger: CACGTGTACATCTGATCCATTCCAGGAGTCTCTCCCACCTGTCCAGTTTGACTGGAGTAGCAGTGGCCTTACTAACCCTTTAGATGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000176782.2 |
||
| CDS CCA 90 bp | CTAGCATCTAAAGGGTTAGTAAGGCCACTGCTACTCCAGTCAAACTaGACAGGTGGGAGAGACTCCTGGAATGGATCAGATGTACACGTG | + |
|
Preference number: 5 (lower is better) Translates to: LASKGLVRPLLLQSN*TGGRDSWNGSDVHV Trigger: CACGTGTACATCTGATCCATTCCAGGAGTCTCTCCCACCTGTCCAGTTTGACTGGAGTAGCAGTGGCCTTACTAACCCTTTAGATGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146722.9 |
||
| CDS CCA 90 bp | GTACCATCTAAAGGGTTAGTAAGGCCACTGCTACTCCAGTCAAACTaGACAGGTGGGAGAGACTCCTGGAATGGATCAGATGTACACGTG | + |
|
Preference number: 5 (lower is better) Translates to: VPSKGLVRPLLLQSN*TGGRDSWNGSDVHV Trigger: CACGTGTACATCTGATCCATTCCAGGAGTCTCTCCCACCTGTCCAGTTTGACTGGAGTAGCAGTGGCCTTACTAACCCTTTAGATGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CAA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTTTTGAATCTGCCACATaGTCCAGGTCATCTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRFESAT*SRSSVP Trigger: GGGAACAGATGACCTGGACAATGTGGCAGATTCAAA...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | GTGCTTTGTGCTTTGGAGCAGCCGCTAGCCACAAGACTGTGTGTCCAAGAACAGCAGTGTTTGAAGGTCTaGTTTTTCAACACTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLCALEQPLATRLCVQEQQCLKV*FFNTEP Trigger: GGGCTCAGTGTTGAAAAACAAGACCTTCAAACACTG...CTGTTCTTGGACACACAGTCTTGTGGCTAGCGGCTGCTCCAAAGCACAAAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGGCACTATAACAGGTaGCTTCTTATTGCCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: APNHVLTVIHTPQPASIDGHYNR*LLIASE Trigger: TTCACTGGCAATAAGAAGCAACCTGTTATAGTGCCC...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS TCA 90 bp | TTGTTTTTCAACACTGAGCCCTCTGTCAGCTACGGCATGGATTTCTaGGACGCAGACCTGATGTTCTCTTTCAGTGTTCCCCGTATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFFNTEPSVSYGMDF*DADLMFSFSVPRIL Trigger: GAGGATACGGGGAACACTGAAAGAGAACATCAGGTCTGCGTCTCAGAAATCCATGCCGTAGCTGACAGAGGGCTCAGTGTTGAAAAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS CCA 90 bp | TTTCCATCTAAAGGGTTAGTAAGGCCACTGCTACTCCAGTCAAACTaGACAGGTGGGAGAGACTCCTGGAATGGATCAGATGTACACGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPSKGLVRPLLLQSN*TGGRDSWNGSDVHV Trigger: CACGTGTACATCTGATCCATTCCAGGAGTCTCTCCCACCTGTCCAGTTTGACTGGAGTAGCAGTGGCCTTACTAACCCTTTAGATGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | TATAGATGTAGTAACTGCCCTGCCCTGATGCACACGCTCTACTGTTCCCCTTTAGAGGCTTCGATCCCTTaGAATCTGCCACATTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: YRCSNCPALMHTLYCSPLEASIP*NLPHCP Trigger: TGGACAATGTGGCAGATTCAAAGGGATCGAAGCCTC...TAAAGGGGAACAGTAGAGCGTGTGCATCAGGGCAGGGCAGTTACTACATCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAACCTCCACTAGCTTGGAATTCAGTGACCGTGTTGGTGGGCAGCCACACACCTCAGACTGAATCCTaGAATTTAGAAACTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: VEPPLAWNSVTVLVGSHTPQTES*NLETHP Trigger: AGGATGAGTTTCTAAATTCAAGGATTCAGTCTGAGG...TGTGTGGCTGCCCACCAACACGGTCACTGAATTCCAAGCTAGTGGAGGTTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS GCA 90 bp | AAATCTCCAGGAGAGAAACTTCTGAGTTGCCCAGTGCTTGGTCCCTaGACCACTACTTTATCTAAGTCTTCCAGGCTTTCCATACCATCG | + |
|
Preference number: 5 (lower is better) Translates to: KSPGEKLLSCPVLGP*TTTLSKSSRLSIPS Trigger: CGATGGTATGGAAAGCCTGGAAGACTTAGATAAAGTAGTGGTGCAGGGACCAAGCACTGGGCAACTCAGAAGTTTCTCTCCTGGAGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS GCA 90 bp | GAATGTTTCGAGTGTCTATTCCCAAGGAGCACAAAAGCTTCTTGTTaGTATGTGAGCCACCCCACTGGTACCGCAAACCATGTGCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: ECFECLFPRSTKASC*YVSHPTGTANHVHH Trigger: ATGATGCACATGGTTTGCGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTCCTTGGGAATAGACACTCGAAACATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGAGATGGAATCATTTCTTaGCTGGTGGTAGAAAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRDGIIS*LVVEST Trigger: TGTACTTTCTACCACCAGCAAAGAAATGATTCCATC...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | CTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAACACACCCATCGAGGCTTCGATCCCTTaGAATCTGCCACATTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LKTKPRKVNESQVLNTPIEASIP*NLPHCP Trigger: TGGACAATGTGGCAGATTCAAAGGGATCGAAGCCTC...GATGGGTGTGTTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGAATCCTGTTGCAGTGTTaGAAGGTCTTGTTTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRILLQC*KVLFFN Trigger: GTTGAAAAACAAGACCTTCAAACACTGCAACAGGAT...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | CCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCCCTCAGACTGAATCCTaGAATTTAGAAACTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PNHVLTVIHTPQPASIDGPQTES*NLETHP Trigger: AGGATGAGTTTCTAAATTCAAGGATTCAGTCTGAGG...GCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGAAAAATCATCCGAGTCTaGAAAAGCACTACCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRKIIRV*KSTTLS Trigger: ACTCAAGGTAGTGCTTTTCAAGACTCGGATGATTTT...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTGGGAACATCAACACCTaGGCATGCATGAAGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ITADMLLMVGKGWNQGRCGNINT*ACMKVR Trigger: CCTGACCTTCATGCATGCCAAGGTGTTGATGTTCCC...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATAAGTACAACATCAGATaGACTTTTCACAGGAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: APNHVLTVIHTPQPASIDKYNIR*TFHRSR Trigger: TCTACTCCTGTGAAAAGTCAATCTGATGTTGTACTT...ATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAAAGAGAAACTTCTGAGTaGCCCAGTGCTTGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LMKTENKAQESERKPGLKRETSE*PSAWSL Trigger: CAGGGACCAAGCACTGGGCAACTCAGAAGTTTCTCT...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | AAATCTCAAAACCCTTGGGCATGCACATCAACCTTGTTAGAGGCTCTTCTACATGGAGGCTTTTCACCGTaGCAGCTCTCTAACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSQNPWACTSTLLEALLHGGFSP*QLSNCL Trigger: CAAGCAGTTAGAGAGCTGCAACGGTGAAAAGCCTCC...ATGTAGAAGAGCCTCTAACAAGGTTGATGTGCATGCCCAAGGGTTTTGAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | CAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGATGGCGTTTCTATTTCTTCCAGTaGTGTCCTTTCTGTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QSCPDSDPHSTTSKHRWRFYFFQ*CPFCLG Trigger: TCCCAAACAGAAAGGACACAACTGGAAGAAATAGAA...ACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | GTAAAAGTAACAGACCATAGGACAGGTAAGTCAAGAGCTGTCAGGCACGGGGAACAGTGTTTGAAGGTCTaGTTTTTCAACACTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VKVTDHRTGKSRAVRHGEQCLKV*FFNTEP Trigger: GGGCTCAGTGTTGAAAAACAAGACCTTCAAACACTG...TTCCCCGTGCCTGACAGCTCTTGACTTACCTGTCCTATGGTCTGTTACTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTTCAGGGTCTGGGCTTTaGGGATTAGTCAGCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ITADMLLMVGKGWNQGRCSGSGL*GLVSFL Trigger: CAGAAAGCTGACTAATCCCAAAAGCCCAGACCCTGA...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCCCAATCATGTCCTGACAGTGATCCACACTCCACAACCAGCAAGCATCGAGACAAGAAACAGCATTaGTATCCTCAAATTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPQSCPDSDPHSTTSKHRDKKQH*YPQILQ Trigger: TTGGAGAATTTGAGGATACAAATGCTGTTTCTTGTC...TCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGACATGATTGGGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATCAGCTAAGGCCTCTCTaGTTTTTGCTGGCGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FDGREGVESRKVYLKLSDQLRPL*FLLASC Trigger: ACAGCTCGCCAGCAAAAACAAGAGAGGCCTTAGCTG...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTCACAAAAGCTTCTTGTaGCTATGTGAGCCACCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ITADMLLMVGKGWNQGRCHKSFL*LCEPPH Trigger: GTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTG...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS GCA 90 bp | ATGACAAGTCACAAAGCCATTCCCACTGTCACCATTTTTCATGCTTaGAGCAGAATCATCCAAAGCATTTTGTCCTGTGGGATCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MTSHKAIPTVTIFHA*SRIIQSILSCGIRV Trigger: GACCCTGATCCCACAGGACAAAATGCTTTGGATGATTCTGCTGCAAGCATGAAAAATGGTGACAGTGGGAATGGCTTTGTGACTTGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAGGAGGCTTTTCACCGTaGCAGCTCTCTAACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KDTTSVFHKDINVYTPATGGFSP*QLSNCL Trigger: CAAGCAGTTAGAGAGCTGCAACGGTGAAAAGCCTCC...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTTTTGAATCTGCCACATaGTCCAGGTCATCTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ITADMLLMVGKGWNQGRCFESAT*SRSSVP Trigger: GGGAACAGATGACCTGGACAATGTGGCAGATTCAAA...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAAGAGGCTTCGATCCCTTaGAATCTGCCACATTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LMKTENKAQESERKPGLKEASIP*NLPHCP Trigger: TGGACAATGTGGCAGATTCAAAGGGATCGAAGCCTC...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | ACTCTGAGGCTTGAGGTGGAGGTCTCCAGCTTAGCAGTTGTTAACTCATACAACCTTCTGAATTTTCACTaGAGTCTACCAAGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLRLEVEVSSLAVVNSYNLLNFH*SLPSSK Trigger: CTTGGAGCTTGGTAGACTCAAGTGAAAATTCAGAAG...GTTGTATGAGTTAACAACTGCTAAGCTGGAGACCTCCACCTCAAGCCTCAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCAAAGAAATCAAGGTTCAGGAGAGTGGAACCTCCACTAGCTTGGAATTCACACCATTTTTCATGCTaGCAGCAGAATCATCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPKKSRFRRVEPPLAWNSHHFSC*QQNHPK Trigger: CTTTGGATGATTCTGCTGCAAGCATGAAAAATGGTG...TGAATTCCAAGCTAGTGGAGGTTCCACTCTCCTGAACCTTGATTTCTTTGGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTCTTTTTGGTTTCCTGGTTGACGTGCTTGTCTTTTCCACTGTAGACATGGGTTTTAATGGTTCCTaGGTGGGCTCTAACATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLFGFLVDVLVFSTVDMGFNGS*VGSNIP Trigger: GGGAATGTTAGAGCCCACCAAGGAACCATTAAAACC...CATGTCTACAGTGGAAAAGACAAGCACGTCAACCAGGAAACCAAAAAGAGAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAGGGAACATCAACACCTaGGCATGCATGAAGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KDTTSVFHKDINVYTPATGNINT*ACMKVR Trigger: CCTGACCTTCATGCATGCCAAGGTGTTGATGTTCCC...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS TCA 90 bp | AAATGCTCTGAGGAGTCTTCAAAAGTGACGTCACTCATTGAATCTTaGGTACTAGTAACAAAGGGTGGAGTGGTGCCATTGGCTGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: KCSEESSKVTSLIES*VLVTKGGVVPLAVP Trigger: TGGTACAGCCAATGGCACCACTCCACCCTTTGTTACTAGTACTCAAGATTCAATGAGTGACGTCACTTTTGAAGACTCCTCAGAGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS CCA 90 bp | CAACCATCTTTCTGTTCATCCTCAAAAGCATTCCAATCTACAGCTTaGCTAGGACCTGCTGAACTGAAGTCTGCAAAATCATCCGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPSFCSSSKAFQSTA*LGPAELKSAKSSES Trigger: AGACTCGGATGATTTTGCAGACTTCAGTTCAGCAGGTCCTAGCCAAGCTGTAGATTGGAATGCTTTTGAGGATGAACAGAAAGATGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000176782.2 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | GTAAAAGTAACAGACCATAGGACAGGTAAGTCAAGAGCTGTCAGGCACGGGGAAATCCTGTTGCAGTGTTaGAAGGTCTTGTTTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VKVTDHRTGKSRAVRHGEILLQC*KVLFFN Trigger: GTTGAAAAACAAGACCTTCAAACACTGCAACAGGAT...TTCCCCGTGCCTGACAGCTCTTGACTTACCTGTCCTATGGTCTGTTACTTTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | AAATCTCAAAACCCTTGGGCATGCACATCAACCTTGTTAGAGGCTCTTCTACATATCATCCAAAGCATTTaGTCCTGTGGGATCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSQNPWACTSTLLEALLHIIQSI*SCGIRV Trigger: GACCCTGATCCCACAGGACAAAATGCTTTGGATGAT...ATGTAGAAGAGCCTCTAACAAGGTTGATGTGCATGCCCAAGGGTTTTGAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATATCATCCAAAGCATTTaGTCCTGTGGGATCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FDGREGVESRKVYLKLSDIIQSI*SCGIRV Trigger: GACCCTGATCCCACAGGACAAAATGCTTTGGATGAT...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACACACAAAAGCTTCTTGTaGCTATGTGAGCCACCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KDTTSVFHKDINVYTPATHKSFL*LCEPPH Trigger: GTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTG...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAGAGCACAAAAGCTTCTaGTTGCTATGTGAGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: KKDTTSVFHKDINVYTPAEHKSF*LLCEPP Trigger: GGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTC...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATGGGCACTATAACAGGTaGCTTCTTATTGCCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: YSRYAFDGREGVESRKVYGHYNR*LLIASE Trigger: TTCACTGGCAATAAGAAGCAACCTGTTATAGTGCCC...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAATCTCAAAACCCTTGGGCATGCACATCAACCTTGTTAGAGGCTCTTCTACATGGTTTTAATGGTTCCTaGGTGGGCTCTAACATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KSQNPWACTSTLLEALLHGFNGS*VGSNIP Trigger: GGGAATGTTAGAGCCCACCAAGGAACCATTAAAACC...ATGTAGAAGAGCCTCTAACAAGGTTGATGTGCATGCCCAAGGGTTTTGAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAGGTGCTCCTCTCTTTTaGGTTTCCTGGTTGACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RYAFDGREGVESRKVYLKGAPLF*VSWLTC Trigger: GCACGTCAACCAGGAAACCAAAAAGAGAGGAGCACC...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS GCA 90 bp | CAAACCCGTTTGTTAGAATTTCCAGACAAGGAGGCTTTTCACCGTTaGAGCTCTCTAACTGCTTGGTTTGGTGAACAATGTTCTTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: QTRLLEFPDKEAFHR*SSLTAWFGEQCSYQ Trigger: CTGATAAGAACATTGTTCACCAAACCAAGCAGTTAGAGAGCTGCAACGGTGAAAAGCCTCCTTGTCTGGAAATTCTAACAAACGGGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS GCA 90 bp | TATCATGACAAGTCACAAAGCCATTCCCACTGTCACCATTTTTCATaGTTGCAGCAGAATCATCCAAAGCATTTTGTCCTGTGGGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: YHDKSQSHSHCHHFS*LQQNHPKHFVLWDQ Trigger: CTGATCCCACAGGACAAAATGCTTTGGATGATTCTGCTGCAAGCATGAAAAATGGTGACAGTGGGAATGGCTTTGTGACTTGTCATGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACATTTGAATCTGCCACATaGTCCAGGTCATCTGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KDTTSVFHKDINVYTPATFESAT*SRSSVP Trigger: GGGAACAGATGACCTGGACAATGTGGCAGATTCAAA...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCCAAGAACAGTTCACAAAGGGAGGCTATAAAACATTCAAACAAATTGGTCTCAGGGTCTGGGCTTTaGGGATTAGTCAGCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSKNSSQREAIKHSNKLVSGSGL*GLVSFL Trigger: CAGAAAGCTGACTAATCCCAAAAGCCCAGACCCTGA...GACCAATTTGTTTGAATGTTTTATAGCCTCCCTTTGTGAACTGTTCTTGGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177014.8 |
||
| CDS-3UTR CAA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTCACCATTTTTCATGCTaGCAGCAGAATCATCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ITADMLLMVGKGWNQGRCHHFSC*QQNHPK Trigger: CTTTGGATGATTCTGCTGCAAGCATGAAAAATGGTG...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAGAGCACAAAAGCTTCTaGTTGCTATGTGAGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RYAFDGREGVESRKVYLKEHKSF*LLCEPP Trigger: GGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTC...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAATCTCAAAACCCTTGGGCATGCACATCAACCTTGTTAGAGGCTCTTCTACATGGGCACTATAACAGGTaGCTTCTTATTGCCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KSQNPWACTSTLLEALLHGHYNR*LLIASE Trigger: TTCACTGGCAATAAGAAGCAACCTGTTATAGTGCCC...ATGTAGAAGAGCCTCTAACAAGGTTGATGTGCATGCCCAAGGGTTTTGAGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTTTTTTGGTTTCCTGGTaGACGTGCTTGTCTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ITADMLLMVGKGWNQGRCFLVSW*TCLSFP Trigger: TGGAAAAGACAAGCACGTCAACCAGGAAACCAAAAA...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS GCA 90 bp | TCTAACATTCCCAATCCTGCTGCATACATGGGCACTATAACAGGTTaGTTCTTATTGCCAGTGAATAGAATGTTTCGAGTGTCTATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SNIPNPAAYMGTITG*FLLPVNRMFRVSIP Trigger: GGGAATAGACACTCGAAACATTCTATTCACTGGCAATAAGAAGCAACCTGTTATAGTGCCCATGTATGCAGCAGGATTGGGAATGTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTGATGGAATCATTTCTTaGCTGGTGGTAGAAAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: ITADMLLMVGKGWNQGRCDGIIS*LVVEST Trigger: TGTACTTTCTACCACCAGCAAAGAAATGATTCCATC...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCGGAGGCTTTTCACCGTaGCAGCTCTCTAACTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VFKKDTTSVFHKDINVYTGGFSP*QLSNCL Trigger: CAAGCAGTTAGAGAGCTGCAACGGTGAAAAGCCTCC...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTCCTCAGACTGAATCCTaGAATTTAGAAACTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: ITADMLLMVGKGWNQGRCPQTES*NLETHP Trigger: AGGATGAGTTTCTAAATTCAAGGATTCAGTCTGAGG...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAATCTCAAAACCCTTGGGCATGCACATCAACCTTGTTAGAGGCTCTTCTACATCTTCTGAATTTTCACTaGAGTCTACCAAGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KSQNPWACTSTLLEALLHLLNFH*SLPSSK Trigger: CTTGGAGCTTGGTAGACTCAAGTGAAAATTCAGAAG...ATGTAGAAGAGCCTCTAACAAGGTTGATGTGCATGCCCAAGGGTTTTGAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATCTTCTGAATTTTCACTaGAGTCTACCAAGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FDGREGVESRKVYLKLSDLLNFH*SLPSSK Trigger: CTTGGAGCTTGGTAGACTCAAGTGAAAATTCAGAAG...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAATCTCAAAACCCTTGGGCATGCACATCAACCTTGTTAGAGGCTCTTCTACATCACCATTTTTCATGCTaGCAGCAGAATCATCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KSQNPWACTSTLLEALLHHHFSC*QQNHPK Trigger: CTTTGGATGATTCTGCTGCAAGCATGAAAAATGGTG...ATGTAGAAGAGCCTCTAACAAGGTTGATGTGCATGCCCAAGGGTTTTGAGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | CTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAACACACCCATCACAGGTTGCTTCTTATaGCCAGTGAATAGAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKTKPRKVNESQVLNTPITGCFL*PVNRMF Trigger: AAACATTCTATTCACTGGCAATAAGAAGCAACCTGT...GATGGGTGTGTTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAGGGCACTATAACAGGTaGCTTCTTATTGCCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KKDTTSVFHKDINVYTPAGHYNR*LLIASE Trigger: TTCACTGGCAATAAGAAGCAACCTGTTATAGTGCCC...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAGGTTTTAATGGTTCCTaGGTGGGCTCTAACATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RYAFDGREGVESRKVYLKGFNGS*VGSNIP Trigger: GGGAATGTTAGAGCCCACCAAGGAACCATTAAAACC...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATAAGTACAACATCAGATaGACTTTTCACAGGAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: YSRYAFDGREGVESRKVYKYNIR*TFHRSR Trigger: TCTACTCCTGTGAAAAGTCAATCTGATGTTGTACTT...ATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATTTCTATTTCTTCCAGTaGTGTCCTTTCTGTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FDGREGVESRKVYLKLSDFYFFQ*CPFCLG Trigger: TCCCAAACAGAAAGGACACAACTGGAAGAAATAGAA...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCTCAGGGTCTGGGCTTTaGGGATTAGTCAGCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VFKKDTTSVFHKDINVYTSGSGL*GLVSFL Trigger: CAGAAAGCTGACTAATCCCAAAAGCCCAGACCCTGA...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTGACAAGAAACAGCATTaGTATCCTCAAATTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ITADMLLMVGKGWNQGRCDKKQH*YPQILQ Trigger: TTGGAGAATTTGAGGATACAAATGCTGTTTCTTGTC...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATAAAATCATCCGAGTCTaGAAAAGCACTACCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FDGREGVESRKVYLKLSDKIIRV*KSTTLS Trigger: ACTCAAGGTAGTGCTTTTCAAGACTCGGATGATTTT...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCACAAAAGCTTCTTGTaGCTATGTGAGCCACCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFKKDTTSVFHKDINVYTHKSFL*LCEPPH Trigger: GTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTG...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | ATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTACAGGTTGCTTCTTATaGCCAGTGAATAGAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ITADMLLMVGKGWNQGRCTGCFL*PVNRMF Trigger: AAACATTCTATTCACTGGCAATAAGAAGCAACCTGT...ACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS CCA 90 bp | TTCCAGGCTTTCCATACCATCGATGGAAGGATCCAAAGTTTTAGATaGAATCATTTCTTTGCTGGTGGTAGAAAGTACAACATCAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: FQAFHTIDGRIQSFR*NHFFAGGRKYNIRL Trigger: CAATCTGATGTTGTACTTTCTACCACCAGCAAAGAAATGATTCCATCTAAAACTTTGGATCCTTCCATCGATGGTATGGAAAGCCTGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCATTCTATTTCTTCCAGTaGTGTCCTTTCTGTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KKDTTSVFHKDINVYTPAFYFFQ*CPFCLG Trigger: TCCCAAACAGAAAGGACACAACTGGAAGAAATAGAA...TGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCACAGTGTTTGAAGGTCTaGTTTTTCAACACTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFLNYSRYAFDGREGVESQCLKV*FFNTEP Trigger: GGGCTCAGTGTTGAAAAACAAGACCTTCAAACACTG...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCATCATCCAAAGCATTTaGTCCTGTGGGATCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFKKDTTSVFHKDINVYTIIQSI*SCGIRV Trigger: GACCCTGATCCCACAGGACAAAATGCTTTGGATGAT...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATGACAAGAAACAGCATTaGTATCCTCAAATTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FDGREGVESRKVYLKLSDDKKQH*YPQILQ Trigger: TTGGAGAATTTGAGGATACAAATGCTGTTTCTTGTC...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | CTGATGAAGACTGAAAACAAAGCCCAGGAAAGTGAACGAAAGCCAGGTCTTAAAGACCATTTTTCAGTTTaGAGTCAGGTTTACTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LMKTENKAQESERKPGLKDHFSV*SQVYCL Trigger: AAGACAGTAAACCTGACTCAAAACTGAAAAATGGTC...TTTAAGACCTGGCTTTCGTTCACTTTCCTGGGCTTTGTTTTCAGTCTTCATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | TTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAACTGTCCGATGACCATTTTTCAGTTTaGAGTCAGGTTTACTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FDGREGVESRKVYLKLSDDHFSV*SQVYCL Trigger: AAGACAGTAAACCTGACTCAAAACTGAAAAATGGTC...ATCGGACAGTTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAAAAATCATCCGAGTCTaGAAAAGCACTACCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KDTTSVFHKDINVYTPATKIIRV*KSTTLS Trigger: ACTCAAGGTAGTGCTTTTCAAGACTCGGATGATTTT...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAATTCTATTTCTTCCAGTaGTGTCCTTTCTGTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RYAFDGREGVESRKVYLKFYFFQ*CPFCLG Trigger: TCCCAAACAGAAAGGACACAACTGGAAGAAATAGAA...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAATCCTGTTGCAGTGTTaGAAGGTCTTGTTTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RYAFDGREGVESRKVYLKILLQC*KVLFFN Trigger: GTTGAAAAACAAGACCTTCAAACACTGCAACAGGAT...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCCCAGCAACAGACAAGAAACAGCATTaGTATCCTCAAATTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KDTTSVFHKDINVYTPATDKKQH*YPQILQ Trigger: TTGGAGAATTTGAGGATACAAATGCTGTTTCTTGTC...TGTTGCTGGGGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS TCA 90 bp | GATGGAATCATTTCTTTGCTGGTGGTAGAAAGTACAACATCAGATTaGCTTTTCACAGGAGTAGAAAGTTCAGCAGTGATATCCTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: DGIISLLVVESTTSD*LFTGVESSAVISLS Trigger: TGATAAGGATATCACTGCTGAACTTTCTACTCCTGTGAAAAGTCAATCTGATGTTGTACTTTCTACCACCAGCAAAGAAATGATTCCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAAAGTACAACATCAGATaGACTTTTCACAGGAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RYAFDGREGVESRKVYLKKYNIR*TFHRSR Trigger: TCTACTCCTGTGAAAAGTCAATCTGATGTTGTACTT...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCACCTCAGACTGAATCCTaGAATTTAGAAACTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LFLNYSRYAFDGREGVESPQTES*NLETHP Trigger: AGGATGAGTTTCTAAATTCAAGGATTCAGTCTGAGG...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | AGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAGGAAGGTGTATTTAAAAGACCATTTTTCAGTTTaGAGTCAGGTTTACTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RYAFDGREGVESRKVYLKDHFSV*SQVYCL Trigger: AAGACAGTAAACCTGACTCAAAACTGAAAAATGGTC...TTTTAAATACACCTTCCTTGATTCCACCCCTTCCCTACCATCAAAAGCATATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAAAAATCATCCGAGTCTaGAAAAGCACTACCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFLNYSRYAFDGREGVESKIIRV*KSTTLS Trigger: ACTCAAGGTAGTGCTTTTCAAGACTCGGATGATTTT...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCTTTTTGGTTTCCTGGTaGACGTGCTTGTCTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VFKKDTTSVFHKDINVYTFLVSW*TCLSFP Trigger: TGGAAAAGACAAGCACGTCAACCAGGAAACCAAAAA...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCATCCTGTTGCAGTGTTaGAAGGTCTTGTTTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VFKKDTTSVFHKDINVYTILLQC*KVLFFN Trigger: GTTGAAAAACAAGACCTTCAAACACTGCAACAGGAT...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTAAATTACAGCAGATATGCTTTTGATGGTAGGGAAGGGGTGGAATCAACAGGTTGCTTCTTATaGCCAGTGAATAGAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFLNYSRYAFDGREGVESTGCFL*PVNRMF Trigger: AAACATTCTATTCACTGGCAATAAGAAGCAACCTGT...TGATTCCACCCCTTCCCTACCATCAAAAGCATATCTGCTGTAATTTAGAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS TCA 90 bp | ACAGGAGTAGAAAGTTCAGCAGTGATATCCTTATCATTACCATTCTaGACAGACTTAAAGCTTGTAAGGCTATCTACATCTTCTGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: TGVESSAVISLSLPF*TDLKLVRLSTSSEY Trigger: ATATTCAGAAGATGTAGATAGCCTTACAAGCTTTAAGTCTGTTCAGAATGGTAATGATAAGGATATCACTGCTGAACTTTCTACTCCTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAGAAGGACACCACCAGTGTATTTCACAAAGACATAAATGTATACACCACAGGTTGCTTCTTATaGCCAGTGAATAGAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VFKKDTTSVFHKDINVYTTGCFL*PVNRMF Trigger: AAACATTCTATTCACTGGCAATAAGAAGCAACCTGT...GGTGTATACATTTATGTCTTTGTGAAATACACTGGTGGTGTCCTTCTTAAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS CAA 90 bp | CGGTCCATACACCCCTCAACTCACCACGGTCAGCTAAGGCCTCTCTaGTTTTTGCTGGCGAGCTGTGTGTCTCCAGCAAGTGCTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSIHPSTHHGQLRPL*FLLASCVSPASASG Trigger: CCCTGAAGCACTTGCTGGAGACACACAGCTCGCCAGCAAAAACAAGAGAGGCCTTAGCTGACCGTGGTGAGTTGAGGGGTGTATGGACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS CCA 72 bp | GAGCCACCCCACTGGTACCGCAAACCATGTGCATCATaGATGTCCTGCAGTTCGGTCCATACACCCCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: EPPHWYRKPCAS*MSCSSVHTPLN Trigger: GTTGAGGGGTGTATGGACCGAACTGCAGGACATCCATGATGCACATGGTTTGCGGTACCAGTGGGGTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS GCA 72 bp | CACTGGTACCGCAAACCATGTGCATCATGGATGTCCTaGAGTTCGGTCCATACACCCCTCAACTCACCACGG | + |
|
Preference number: 6 (lower is better) Translates to: HWYRKPCASWMS*SSVHTPLNSPR Trigger: CCGTGGTGAGTTGAGGGGTGTATGGACCGAACTGCAGGACATCCATGATGCACATGGTTTGCGGTACCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS CAA 72 bp | CACCCCTCAACTCACCACGGTCAGCTAAGGCCTCTCTaGTTTTTGCTGGCGAGCTGTGTGTCTCCAGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HPSTHHGQLRPL*FLLASCVSPAS Trigger: ACTTGCTGGAGACACACAGCTCGCCAGCAAAAACAAGAGAGGCCTTAGCTGACCGTGGTGAGTTGAGGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS GCA 72 bp | CTTGTTTTTGCTGGCGAGCTGTGTGTCTCCAGCAAGTaGTTCAGGGAAGAAACCTCCTCTTCCACATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LVFAGELCVSSK*FREETSSSTSG Trigger: CCCTGATGTGGAAGAGGAGGTTTCTTCCCTGAAGCACTTGCTGGAGACACACAGCTCGCCAGCAAAAACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
||
| CDS CAA 72 bp | TCAACTCACCACGGTCAGCTAAGGCCTCTCTTGTTTTaGCTGGCGAGCTGTGTGTCTCCAGCAAGTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: STHHGQLRPLLF*LASCVSPASAS Trigger: TGAAGCACTTGCTGGAGACACACAGCTCGCCAGCAAAAACAAGAGAGGCCTTAGCTGACCGTGGTGAGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS TCA 72 bp | CTCGGTGCCACAAGTGTTAAGAGGCTTCGATCCCTTTaGATCTGCCACATTGTCCAGGTCATCTGTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGATSVKRLRSL*ICHIVQVICSL Trigger: CAGGGAACAGATGACCTGGACAATGTGGCAGATTCAAAGGGATCGAAGCCTCTTAACACTTGTGGCACCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CCA 72 bp | CACAAAAGCTTCTTGTTGCTATGTGAGCCACCCCACTaGTACCGCAAACCATGTGCATCATGGATGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: HKSFLLLCEPPH*YRKPCASWMSC Trigger: GCAGGACATCCATGATGCACATGGTTTGCGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CCA 72 bp | AGTAAGGCCACTGCTACTCCAGTCAAACTGGACAGGTaGGAGAGACTCCTGGAATGGATCAGATGTACACGT | + |
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Preference number: 6 (lower is better) Translates to: SKATATPVKLDR*ERLLEWIRCTR Trigger: ACGTGTACATCTGATCCATTCCAGGAGTCTCTCCCACCTGTCCAGTTTGACTGGAGTAGCAGTGGCCTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000176782.2 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CAA 72 bp | CGAGTGTCTATTCCCAAGGAGCACAAAAGCTTCTTGTaGCTATGTGAGCCACCCCACTGGTACCGCAAACCA | + |
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Preference number: 6 (lower is better) Translates to: RVSIPKEHKSFL*LCEPPHWYRKP Trigger: TGGTTTGCGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTCCTTGGGAATAGACACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS TCA 72 bp | CTGTCAGCTACGGCATGGATTTCTGAGACGCAGACCTaGTGTTCTCTTTCAGTGTTCCCCGTATCCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSATAWISETQT*CSLSVFPVSSK Trigger: CTTTGAGGATACGGGGAACACTGAAAGAGAACATCAGGTCTGCGTCTCAGAAATCCATGCCGTAGCTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS TCA 72 bp | TATTCCCAAGGAGCACAAAAGCTTCTTGTTGCTATGTaGGCCACCCCACTGGTACCGCAAACCATGTGCATC | + |
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Preference number: 6 (lower is better) Translates to: YSQGAQKLLVAM*ATPLVPQTMCI Trigger: GATGCACATGGTTTGCGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTCCTTGGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS GCA 72 bp | GGAGAGAAACTTCTGAGTTGCCCAGTGCTTGGTCCCTaGACCACTACTTTATCTAAGTCTTCCAGGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GEKLLSCPVLGP*TTTLSKSSRLS Trigger: GGAAAGCCTGGAAGACTTAGATAAAGTAGTGGTGCAGGGACCAAGCACTGGGCAACTCAGAAGTTTCTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
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| CDS GCA 72 bp | GCAACTGCTCCTTTGGAAGCTGCTGAAGAAACACTGTaGATCTTAGGGGTTCCCAGAGTGCCCATAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: ATAPLEAAEETL*ILGVPRVPIVS Trigger: TGAAACTATGGGCACTCTGGGAACCCCTAAGATGCACAGTGTTTCTTCAGCAGCTTCCAAAGGAGCAGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000176782.2 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS GCA 72 bp | GAGTGTCTATTCCCAAGGAGCACAAAAGCTTCTTGTTaGTATGTGAGCCACCCCACTGGTACCGCAAACCAT | + |
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Preference number: 6 (lower is better) Translates to: ECLFPRSTKASC*YVSHPTGTANH Trigger: ATGGTTTGCGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTCCTTGGGAATAGACACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CCA 72 bp | AAAGGGTTAGTAAGGCCACTGCTACTCCAGTCAAACTaGACAGGTGGGAGAGACTCCTGGAATGGATCAGAT | + |
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Preference number: 6 (lower is better) Translates to: KGLVRPLLLQSN*TGGRDSWNGSD Trigger: ATCTGATCCATTCCAGGAGTCTCTCCCACCTGTCCAGTTTGACTGGAGTAGCAGTGGCCTTACTAACCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000176782.2 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CAA 72 bp | TTTCGAGTGTCTATTCCCAAGGAGCACAAAAGCTTCTaGTTGCTATGTGAGCCACCCCACTGGTACCGCAAA | + |
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Preference number: 6 (lower is better) Translates to: FRVSIPKEHKSF*LLCEPPHWYRK Trigger: TTTGCGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTCCTTGGGAATAGACACTCGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CAA 90 bp | AGAATGTTTCGAGTGTCTATTCCCAAGGAGCACAAAAGCTTCTTGTaGCTATGTGAGCCACCCCACTGGTACCGCAAACCATGTGCATCA | + |
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Preference number: 6 (lower is better) Translates to: RMFRVSIPKEHKSFL*LCEPPHWYRKPCAS Trigger: TGATGCACATGGTTTGCGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTCCTTGGGAATAGACACTCGAAACATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CAA 90 bp | AATAGAATGTTTCGAGTGTCTATTCCCAAGGAGCACAAAAGCTTCTaGTTGCTATGTGAGCCACCCCACTGGTACCGCAAACCATGTGCA | + |
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Preference number: 6 (lower is better) Translates to: NRMFRVSIPKEHKSF*LLCEPPHWYRKPCA Trigger: TGCACATGGTTTGCGGTACCAGTGGGGTGGCTCACATAGCAACAAGAAGCTTTTGTGCTCCTTGGGAATAGACACTCGAAACATTCTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS TCA 72 bp | ACGGAAAACAGGCTTCGAAAATTCTCTCCAACCGGTTaGGTAAAGCTGTCTGAACTGAAGTGCCTGGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TENRLRKFSPTG*VKLSELKCLVP Trigger: AGGAACCAGGCACTTCAGTTCAGACAGCTTTACTCAACCGGTTGGAGAGAATTTTCGAAGCCTGTTTTCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CAA 90 bp | CATGACAAGTCACAAAGCCATTCCCACTGTCACCATTTTTCATGCTaGCAGCAGAATCATCCAAAGCATTTTGTCCTGTGGGATCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: HDKSQSHSHCHHFSC*QQNHPKHFVLWDQG Trigger: ACCCTGATCCCACAGGACAAAATGCTTTGGATGATTCTGCTGCAAGCATGAAAAATGGTGACAGTGGGAATGGCTTTGTGACTTGTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS TCA 72 bp | CATCCAAAGTCACTTCTTTCACACAGTTTAGTTCCTTaGCTCTGGGGCCTTTGCTGTTTCCCTGAATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: HPKSLLSHSLVP*LWGLCCFPEWS Trigger: TGACCATTCAGGGAAACAGCAAAGGCCCCAGAGTCAAGGAACTAAACTGTGTGAAAGAAGTGACTTTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS GCA 72 bp | TCAGTTCTAAAATCTCCAGGAGAGAAACTTCTGAGTTaGCCAGTGCTTGGTCCCTGCACCACTACTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: SVLKSPGEKLLS*PVLGPCTTTLS Trigger: AGATAAAGTAGTGGTGCAGGGACCAAGCACTGGGCAACTCAGAAGTTTCTCTCCTGGAGATTTTAGAACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
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| CDS GCA 72 bp | CACAAAGCCATTCCCACTGTCACCATTTTTCATGCTTaGAGCAGAATCATCCAAAGCATTTTGTCCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: HKAIPTVTIFHA*SRIIQSILSCG Trigger: CCCACAGGACAAAATGCTTTGGATGATTCTGCTGCAAGCATGAAAAATGGTGACAGTGGGAATGGCTTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS TCA 72 bp | GAGGAGTCTTCAAAAGTGACGTCACTCATTGAATCTTaGGTACTAGTAACAAAGGGTGGAGTGGTGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: EESSKVTSLIES*VLVTKGGVVPL Trigger: CAATGGCACCACTCCACCCTTTGTTACTAGTACTCAAGATTCAATGAGTGACGTCACTTTTGAAGACTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS GCA 72 bp | CCCAATCCTGCTGCATACATGGGCACTATAACAGGTTaGTTCTTATTGCCAGTGAATAGAATGTTTCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: PNPAAYMGTITG*FLLPVNRMFRV Trigger: CACTCGAAACATTCTATTCACTGGCAATAAGAAGCAACCTGTTATAGTGCCCATGTATGCAGCAGGATTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CAA 72 bp | CCTGAGGATTTACAGTTTCCAAACCTGCAAACCCGTTaGTTAGAATTTCCAGACAAGGAGGCTTTTCACCGT | + |
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Preference number: 6 (lower is better) Translates to: PEDLQFPNLQTR*LEFPDKEAFHR Trigger: ACGGTGAAAAGCCTCCTTGTCTGGAAATTCTAACAAACGGGTTTGCAGGTTTGGAAACTGTAAATCCTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CAA 72 bp | ATTTTTCATGCTTGCAGCAGAATCATCCAAAGCATTTaGTCCTGTGGGATCAGGGTCTGGGCTTTTGGGATT | + |
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Preference number: 6 (lower is better) Translates to: IFHACSRIIQSI*SCGIRVWAFGI Trigger: AATCCCAAAAGCCCAGACCCTGATCCCACAGGACAAAATGCTTTGGATGATTCTGCTGCAAGCATGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS GCA 72 bp | TTGTTAGAATTTCCAGACAAGGAGGCTTTTCACCGTTaGAGCTCTCTAACTGCTTGGTTTGGTGAACAATGT | + |
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Preference number: 6 (lower is better) Translates to: LLEFPDKEAFHR*SSLTAWFGEQC Trigger: ACATTGTTCACCAAACCAAGCAGTTAGAGAGCTGCAACGGTGAAAAGCCTCCTTGTCTGGAAATTCTAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS GCA 72 bp | AAGTCACAAAGCCATTCCCACTGTCACCATTTTTCATaGTTGCAGCAGAATCATCCAAAGCATTTTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: KSQSHSHCHHFS*LQQNHPKHFVL Trigger: CAGGACAAAATGCTTTGGATGATTCTGCTGCAAGCATGAAAAATGGTGACAGTGGGAATGGCTTTGTGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CCA 72 bp | TTCTGTTCATCCTCAAAAGCATTCCAATCTACAGCTTaGCTAGGACCTGCTGAACTGAAGTCTGCAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: FCSSSKAFQSTA*LGPAELKSAKS Trigger: TGATTTTGCAGACTTCAGTTCAGCAGGTCCTAGCCAAGCTGTAGATTGGAATGCTTTTGAGGATGAACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000176782.2 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CAA 72 bp | GCTGCATACATGGGCACTATAACAGGTTGCTTCTTATaGCCAGTGAATAGAATGTTTCGAGTGTCTATTCCC | + |
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Preference number: 6 (lower is better) Translates to: AAYMGTITGCFL*PVNRMFRVSIP Trigger: GGGAATAGACACTCGAAACATTCTATTCACTGGCAATAAGAAGCAACCTGTTATAGTGCCCATGTATGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CAA 90 bp | GAATCATCCAAAGCATTTTGTCCTGTGGGATCAGGGTCTGGGCTTTaGGGATTAGTCAGCTTTCTGTTTTCTTCTTTGGAAGAACCAATT | + |
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Preference number: 6 (lower is better) Translates to: ESSKAFCPVGSGSGL*GLVSFLFSSLEEPI Trigger: AATTGGTTCTTCCAAAGAAGAAAACAGAAAGCTGACTAATCCCAAAAGCCCAGACCCTGATCCCACAGGACAAAATGCTTTGGATGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CCA 72 bp | CTCCTGGAATGGATCAGATGTACACGTGTTTATTTCTaGTGTCATAACGGTTGTCTGACCAATAGAAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: LLEWIRCTRVYF*CHNGCLTNRSN Trigger: ATTGCTTCTATTGGTCAGACAACCGTTATGACACCAGAAATAAACACGTGTACATCTGATCCATTCCAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000176782.2 ENSMUST00000177014.8 ENSMUST00000177543.8 |
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| CDS CCA 72 bp | TTCCATACCATCGATGGAAGGATCCAAAGTTTTAGATaGAATCATTTCTTTGCTGGTGGTAGAAAGTACAAC | + |
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Preference number: 6 (lower is better) Translates to: FHTIDGRIQSFR*NHFFAGGRKYN Trigger: GTTGTACTTTCTACCACCAGCAAAGAAATGATTCCATCTAAAACTTTGGATCCTTCCATCGATGGTATGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
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| CDS CAA 72 bp | CATTTCTTTGCTGGTGGTAGAAAGTACAACATCAGATaGACTTTTCACAGGAGTAGAAAGTTCAGCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: HFFAGGRKYNIR*TFHRSRKFSSD Trigger: ATCACTGCTGAACTTTCTACTCCTGTGAAAAGTCAATCTGATGTTGTACTTTCTACCACCAGCAAAGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
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| CDS CAA 90 bp | AGATGGAATCATTTCTTTGCTGGTGGTAGAAAGTACAACATCAGATaGACTTTTCACAGGAGTAGAAAGTTCAGCAGTGATATCCTTATC | + |
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Preference number: 6 (lower is better) Translates to: RWNHFFAGGRKYNIR*TFHRSRKFSSDILI Trigger: GATAAGGATATCACTGCTGAACTTTCTACTCCTGTGAAAAGTCAATCTGATGTTGTACTTTCTACCACCAGCAAAGAAATGATTCCATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
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| CDS TCA 72 bp | GAAAGTTCAGCAGTGATATCCTTATCATTACCATTCTaGACAGACTTAAAGCTTGTAAGGCTATCTACATCT | + |
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Preference number: 6 (lower is better) Translates to: ESSAVISLSLPF*TDLKLVRLSTS Trigger: AGATGTAGATAGCCTTACAAGCTTTAAGTCTGTTCAGAATGGTAATGATAAGGATATCACTGCTGAACTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035350.12 ENSMUST00000146722.9 ENSMUST00000177543.8 |
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