Pregenerated sensors for AFM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029369Ensembl transcript IDs: ENSMUST00000113179.9, ENSMUST00000128740.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACGCAGGCGAACTCGTCACTGAGAGTGCAACAGGTTGTCAGAGCTaGCACCATTTCCTTACTAAGGGAGACCAGTTCTTCCATGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: NAGELVTESATGCQS*HHFLTKGDQFFHGE Trigger: CTCCCCATGGAAGAACTGGTCTCCCTTAGTAAGGAAATGGTGGCAGCTCTGACAACCTGTTGCACTCTCAGTGACGAGTTCGCCTGCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 90 bp | GCCACCATTTCCTTACTAAGGGAGACCAGTTCTTCCATGGGGAGCTaGGGGGCTGCCTTGGTGAACTTGACAAGGAAACTGAGAGAACAC | + |
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Preference number: 1 (lower is better) Translates to: ATISLLRETSSSMGS*GAALVNLTRKLREH Trigger: GTGTTCTCTCAGTTTCCTTGTCAAGTTCACCAAGGCAGCCCCTCAGCTCCCCATGGAAGAACTGGTCTCCCTTAGTAAGGAAATGGTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 90 bp | AGAAAGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAAAGCTaGATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGG | + |
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Preference number: 1 (lower is better) Translates to: RKGYGKTFYSILLKS*ISPHHRAEDGPANW Trigger: CCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| 3UTR TCA 90 bp | TCACTCCTGAGCTACCCATTGGTTTCCCAGGAAACAGTCGACACCTaGAGTTCTTTCCATTCTCCTTACTCAGGACAGAATGCAAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: SLLSYPLVSQETVDT*SSFHSPYSGQNARV Trigger: GACTCTTGCATTCTGTCCTGAGTAAGGAGAATGGAAAGAACTTCAGGTGTCGACTGTTTCCTGGGAAACCAATGGGTAGCTCAGGAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR GCA 90 bp | AGTCGACACCTGAAGTTCTTTCCATTCTCCTTACTCAGGACAGAATaGAAGAGTCCTGCTTTGGAGGCCAGAAACTCAAGTTCACAGACA | + |
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Preference number: 1 (lower is better) Translates to: SRHLKFFPFSLLRTE*KSPALEARNSSSQT Trigger: TGTCTGTGAACTTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAAGGAGAATGGAAAGAACTTCAGGTGTCGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 90 bp | GCCTTGGTGAACTTGACAAGGAAACTGAGAGAACACACATCTATTTaGACAACTACTACCAAACCCACGAGTGAGAGGACTAATAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: ALVNLTRKLREHTSI*TTTTKPTSERTNSQ Trigger: CTGGCTATTAGTCCTCTCACTCGTGGGTTTGGTAGTAGTTGTTCAAATAGATGTGTGTTCTCTCAGTTTCCTTGTCAAGTTCACCAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR CCA 90 bp | TCTTTCCATTCTCCTTACTCAGGACAGAATGCAAGAGTCCTGCTTTaGAGGCCAGAAACTCAAGTTCACAGACACTTAAACCTTACAGTA | + |
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Preference number: 1 (lower is better) Translates to: SFHSPYSGQNARVLL*RPETQVHRHLNLTV Trigger: TACTGTAAGGTTTAAGTGTCTGTGAACTTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAAGGAGAATGGAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 90 bp | CTCATTTCTTGTCAAAGAGTCCTGAGAAGGCTCAGTGGGAATTCTTaGCTTTTATGTCTTTGTTCTTTCCCAGAGTTGAATTGGCATGAC | + |
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Preference number: 1 (lower is better) Translates to: LISCQRVLRRLSGNS*LLCLCSFPELNWHD Trigger: GTCATGCCAATTCAACTCTGGGAAAGAACAAAGACATAAAAGTCAAGAATTCCCACTGAGCCTTCTCAGGACTCTTTGACAAGAAATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 90 bp | CCATCTTTCTTTCCGTTTGTGACCTCATTTCTTGTCAAAGAGTCCTaGGAAGGCTCAGTGGGAATTCTTGACTTTTATGTCTTTGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: PSFFPFVTSFLVKES*EGSVGILDFYVFVL Trigger: AAGAACAAAGACATAAAAGTCAAGAATTCCCACTGAGCCTTCTCAGGACTCTTTGACAAGAAATGAGGTCACAAACGGAAAGAAAGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 90 bp | TCAGTGGGAATTCTTGACTTTTATGTCTTTGTTCTTTCCCAGAGTTaGATTGGCATGACTGAAAGACCAGCCTACAATAATACAATGATA | + |
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Preference number: 1 (lower is better) Translates to: SVGILDFYVFVLSQS*IGMTERPAYNNTMI Trigger: TATCATTGTATTATTGTAGGCTGGTCTTTCAGTCATGCCAATTCAACTCTGGGAAAGAACAAAGACATAAAAGTCAAGAATTCCCACTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR-3UTR TCA 90 bp | GCAACAGGTTGTCAGAGCTGCCACCATTTCCTTACTAAGGGAGACCAGTTCTTCAGAGTTGAATTGGCATaGCTGAAAGACCAGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: ATGCQSCHHFLTKGDQFFRVELA*LKDQPT Trigger: TGTAGGCTGGTCTTTCAGTCATGCCAATTCAACTCT...GAAGAACTGGTCTCCCTTAGTAAGGAAATGGTGGCAGCTCTGACAACCTGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATGGGGAGCTGAGGGGCTGCCTTGGTGAACTTGACAAGGAAACTGAGAGACTTTCTTTCCGTTTGTaGCCTCATTTCTTGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: FHGELRGCLGELDKETERLSFRL*PHFLSK Trigger: CTTTGACAAGAAATGAGGTCACAAACGGAAAGAAAG...TCTCTCAGTTTCCTTGTCAAGTTCACCAAGGCAGCCCCTCAGCTCCCCATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTTACTCAGGACAGAATGCAAGAGTCCTGCTTTGGAGGCCAGAAACTCAACCTGAGAAGGCTCAGTaGGAATTCTTGACTTTTATG | + |
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Preference number: 2 (lower is better) Translates to: SPYSGQNARVLLWRPETQPEKAQ*EFLTFM Trigger: CATAAAAGTCAAGAATTCCCACTGAGCCTTCTCAGG...TTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTCACAGCAACACTGCAGGAATGATGAAGTCACATTGTAAACTGTGTTGTTTACTCAGGACAGAATaGAAGAGTCCTGCTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: AAHSNTAGMMKSHCKLCCLLRTE*KSPALE Trigger: CTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAA...ACAACACAGTTTACAATGTGACTTCATCATTCCTGCAGTGTTGCTGTGAGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR CAA 90 bp | TTCTTTCCATTCTCCTTACTCAGGACAGAATGCAAGAGTCCTGCTTaGGAGGCCAGAAACTCAAGTTCACAGACACTTAAACCTTACAGT | + |
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Preference number: 2 (lower is better) Translates to: FFPFSLLRTECKSPA*EARNSSSQTLKPYS Trigger: ACTGTAAGGTTTAAGTGTCTGTGAACTTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAAGGAGAATGGAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTCACAGCAACACTGCAGGAATGATGAAGTCACATTGTAAACTGTGTTGTGTTCTTTCCCAGAGTTaGATTGGCATGACTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AAHSNTAGMMKSHCKLCCVLSQS*IGMTER Trigger: TCTTTCAGTCATGCCAATTCAACTCTGGGAAAGAAC...ACAACACAGTTTACAATGTGACTTCATCATTCCTGCAGTGTTGCTGTGAGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGTGCCTCGAATCCCATCTTTCTTTCCGTTTGTGACCTCATTTCTTGTCAACTCAGTGGGAATTCTTaGCTTTTATGTCTTTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: NSASNPIFLSVCDLISCQLSGNS*LLCLCS Trigger: AGAACAAAGACATAAAAGTCAAGAATTCCCACTGAG...TTGACAAGAAATGAGGTCACAAACGGAAAGAAAGATGGGATTCGAGGCACTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATTGCCTTTTGTAGGAACATGATTCAAGAAAGGGTTACGGAAAAACCTTCTATTCTTCTCAAAAGCTaGATTTCACCACACCACAGG | + |
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Preference number: 2 (lower is better) Translates to: FIAFCRNMIQERVTEKPSILLKS*ISPHHR Trigger: CCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAAT...AGAAGGTTTTTCCGTAACCCTTTCTTGAATCATGTTCCTACAAAAGGCAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| 3UTR-3UTR CAA 90 bp | TTCCATGGGGAGCTGAGGGGCTGCCTTGGTGAACTTGACAAGGAAACTGAGAGATGCAAGAGTCCTGCTTaGGAGGCCAGAAACTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: FHGELRGCLGELDKETERCKSPA*EARNSS Trigger: ACTTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCA...TCTCTCAGTTTCCTTGTCAAGTTCACCAAGGCAGCCCCTCAGCTCCCCATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 72 bp | TACTCACCAAGTTGTCAACGCAGGCGAACTCGTCACTaGGAGTGCAACAGGTTGTCAGAGCTGCCACCATTT | + |
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Preference number: 3 (lower is better) Translates to: YSPSCQRRRTRH*ECNRLSELPPF Trigger: AAATGGTGGCAGCTCTGACAACCTGTTGCACTCTCAGTGACGAGTTCGCCTGCGTTGACAACTTGGTGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAAGAAAAGTAGGGTCCTTAGGCGGGCTGAGGTTGGCACTGCAGCTCACAGCCATCTGAGAGATTATTaGAGCCAAGTTTTAGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: MKKSRVLRRAEVGTAAHSHLRDY*SQVLAQ Trigger: TTGGGCTAAAACTTGGCTCAAATAATCTCTCAGATG...GCTGTGAGCTGCAGTGCCAACCTCAGCCCGCCTAAGGACCCTACTTTTCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR-3UTR CAA 90 bp | GGACCATTTGACAGCCATGCTAGGAATAAGATGAAGAAAAGTAGGGTCCTTAGGCTCCTGAGCTACCCATaGGTTTCCCAGGAAACAGTC | + |
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Preference number: 3 (lower is better) Translates to: GPFDSHARNKMKKSRVLRLLSYP*VSQETV Trigger: GACTGTTTCCTGGGAAACCAATGGGTAGCTCAGGAG...CCTAAGGACCCTACTTTTCTTCATCTTATTCCTAGCATGGCTGTCAAATGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR GCA 72 bp | TCCATTCTCCTTACTCAGGACAGAATGCAAGAGTCCTaGTTTGGAGGCCAGAAACTCAAGTTCACAGACACT | + |
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Preference number: 3 (lower is better) Translates to: SILLTQDRMQES*FGGQKLKFTDT Trigger: AGTGTCTGTGAACTTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAAGGAGAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 72 bp | AGCTACCCATTGGTTTCCCAGGAAACAGTCGACACCTaGAGTTCTTTCCATTCTCCTTACTCAGGACAGAAT | + |
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Preference number: 3 (lower is better) Translates to: SYPLVSQETVDT*SSFHSPYSGQN Trigger: ATTCTGTCCTGAGTAAGGAGAATGGAAAGAACTTCAGGTGTCGACTGTTTCCTGGGAAACCAATGGGTAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR CCA 72 bp | TCTCCTTACTCAGGACAGAATGCAAGAGTCCTGCTTTaGAGGCCAGAAACTCAAGTTCACAGACACTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: SPYSGQNARVLL*RPETQVHRHLN Trigger: GTTTAAGTGTCTGTGAACTTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTTACTCAGGACAGAATGCAAGAGTCCTGCTTTGGAGGCCAGAAACTCAAGCTCAGTGGGAATTCTaGACTTTTATGTCTTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: SPYSGQNARVLLWRPETQAQWEF*TFMSLF Trigger: GAACAAAGACATAAAAGTCAAGAATTCCCACTGAGC...TTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAAGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 72 bp | TTTCCGTTTGTGACCTCATTTCTTGTCAAAGAGTCCTaGGAAGGCTCAGTGGGAATTCTTGACTTTTATGTC | + |
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Preference number: 3 (lower is better) Translates to: FPFVTSFLVKES*EGSVGILDFYV Trigger: GACATAAAAGTCAAGAATTCCCACTGAGCCTTCTCAGGACTCTTTGACAAGAAATGAGGTCACAAACGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 72 bp | GACCCTCATGACATGATAGAAAATCCTTGGCAGAAATaGCCTTGGCCAGTAAGTTTTGAGATACGTTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: DPHDMIENPWQK*PWPVSFEIRCV Trigger: AACACAACGTATCTCAAAACTTACTGGCCAAGGTCATTTCTGCCAAGGATTTTCTATCATGTCATGAGGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 72 bp | AACTTGACAAGGAAACTGAGAGAACACACATCTATTTaGACAACTACTACCAAACCCACGAGTGAGAGGACT | + |
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Preference number: 3 (lower is better) Translates to: NLTRKLREHTSI*TTTTKPTSERT Trigger: AGTCCTCTCACTCGTGGGTTTGGTAGTAGTTGTTCAAATAGATGTGTGTTCTCTCAGTTTCCTTGTCAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| 3UTR TCA 72 bp | AAGGAGGTCATGAATTTAAGAGGGAGTGAGGGGCAATaGTATAATTGTATCTCACTTTTAAGAACCGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: KEVMNLRGSEGQ*YNCISLLRTAD Trigger: ATCTGCGGTTCTTAAAAGTGAGATACAATTATATCATTGCCCCTCACTCCCTCTTAAATTCATGACCTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| CDS-3UTR TCA 90 bp | TCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGGCTTTGGTCGGGAGCTGCCTTGGCTTaGAAGCAGGTGGCTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SPHHRAEDGPANWHWLWSGAALA*KQVAFC Trigger: ACAGAAAGCCACCTGCTTTCAAGCCAAGGCAGCTCC...CGACCAAAGCCAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR GCA 90 bp | ATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGGCTTTGGGGGGAGCTGAGGGGCTaGCTTGGTGAACTTGACAAG | + |
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Preference number: 4 (lower is better) Translates to: ISPHHRAEDGPANWHWLWGELRG*LGELDK Trigger: CTTGTCAAGTTCACCAAGGCAGCCCCTCAGCTCCCC...CCAAAGCCAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAAT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR GCA 90 bp | CAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACAGGACTCAGGCTCCTaGACTTCGCTGCACTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: QKLNFTTPQGGGRSCKLAQDSGS*TSLHSS Trigger: GGAGGAGTGCAGCGAAGTGCAGGAGCCTGAGTCCTG...TGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR CCA 90 bp | TCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGGCTTTGGTCGGAAACAGAGTCTTCTTaGAAAGCCGGCTTTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SPHHRAEDGPANWHWLWSETESS*KAGFPA Trigger: TGCGGGAAAGCCGGCTTTCCAAGAAGACTCTGTTTC...CGACCAAAGCCAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR GCA 90 bp | TCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGGCTTTGGTCGCTGCTGGGTTTTCTCTaGTGCAGCAGTCTTCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: SPHHRAEDGPANWHWLWSLLGFL*CSSLLR Trigger: TCTTAGAAGACTGCTGCAGCAGAGAAAACCCAGCAG...CGACCAAAGCCAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR CCA 90 bp | TCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGGCTTTGGTCGTGGCTTGAAAGCAGGTaGCTTTCTGTTGCTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: SPHHRAEDGPANWHWLWSWLESR*LSVAVH Trigger: GTGAACAGCAACAGAAAGCCACCTGCTTTCAAGCCA...CGACCAAAGCCAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR TCA 90 bp | TTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGGCTTTGGTGCTTTCCCGCAGCAATaGGAAAAGTTGTGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FHHTTGRRTVLQTGTGFGAFPQQ*EKLCFC Trigger: GCAGAAGCACAACTTTTCTCATTGCTGCGGGAAAGC...ACCAAAGCCAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR TCA 90 bp | TTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGGCTTTGGTCTGTGTTTCTTATTCTaGAGGTCCTCCTTACGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FHHTTGRRTVLQTGTGFGLCFLF*RSSLRG Trigger: GCCTCGTAAGGAGGACCTTCAGAATAAGAAACACAG...ACCAAAGCCAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR GCA 90 bp | TCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGGCTTTGGTCGGTATCAGCTTTCAGATaGTCAAAGCAGTGTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SPHHRAEDGPANWHWLWSVSAFR*SKQCLL Trigger: CAGAAGACACTGCTTTGAGCATCTGAAAGCTGATAC...CGACCAAAGCCAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR GCA 90 bp | AAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGCAGGTGGCTTTCTGTTaGTGTTCACAACATGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: KLNFTTPQGGGRSCKLALQVAFC*CSQHVV Trigger: GACCACATGTTGTGAACAGCAACAGAAAGCCACCTG...CAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR CCA 90 bp | TCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGGCTTTGGTCGTGTTTTGAACAAATATaGTTCACAACCTGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SPHHRAEDGPANWHWLWSCFEQI*FTTWLW Trigger: CCAGAGCCAGGTTGTGAACCATATTTGTTCAAAACA...CGACCAAAGCCAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR CCA 90 bp | TTCCATGGGGAGCTGAGGGGCTGCCTTGGTGAACTTGACAAGGAAACTGAGAGAGCGGTAACAACCTGCTaGGTTTTCTCTGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: FHGELRGCLGELDKETERAVTTC*VFSAAA Trigger: TGCTGCAGCAGAGAAAACCCAGCAGGTTGTTACCGC...TCTCTCAGTTTCCTTGTCAAGTTCACCAAGGCAGCCCCTCAGCTCCCCATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| CDS-3UTR TCA 90 bp | TTCCATGGGGAGCTGAGGGGCTGCCTTGGTGAACTTGACAAGGAAACTGAGAGAGCTTTCCCGCAGCAATaGGAAAAGTTGTGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FHGELRGCLGELDKETERAFPQQ*EKLCFC Trigger: GCAGAAGCACAACTTTTCTCATTGCTGCGGGAAAGC...TCTCTCAGTTTCCTTGTCAAGTTCACCAAGGCAGCCCCTCAGCTCCCCATGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| CDS-3UTR TCA 90 bp | CTTCTATTCCATTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGATCTTCCATGGGGAGCTaGGGGGCTGCCTTGGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: LLFHSSQKLNFTTPQGGGSSMGS*GAALVN Trigger: GTTCACCAAGGCAGCCCCTCAGCTCCCCATGGAAGA...TCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAATGGAATAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR GCA 90 bp | TTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAACTCCTGCTGCACCATTaGAAGGCTTCGCTGAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: FFSKAEFHHTTGRRTVLQLLLHH*KASLSC Trigger: ACAACTCAGCGAAGCCTTGCAATGGTGCAGCAGGAG...TTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR CCA 90 bp | TCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAAGCGGTAACAACCTGCTaGGTTTTCTCTGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SSQKLNFTTPQGGGRSCKAVTTC*VFSAAA Trigger: TGCTGCAGCAGAGAAAACCCAGCAGGTTGTTACCGC...TTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS-3UTR CCA 90 bp | CATTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCCTCATCCGTGATCCCTaGCATCCACTTCACCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSSQKLNFTTPQGGGRSCLIRDP*HPLHQV Trigger: AACTTGGTGAAGTGGATGCCAGGGATCACGGATGAG...GCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTACTCAGGACAGAATGCAAGAGTCCTGCTTTGGAGGCCAGAAACTCAAGGAGCTGCCTTGGCTTaGAAGCAGGTGGCTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPYSGQNARVLLWRPETQGAALA*KQVAFC Trigger: ACAGAAAGCCACCTGCTTTCAAGCCAAGGCAGCTCC...TTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAGAAAAGTAGGGTCCTTAGGCGGGCTGAGGTTGGCACTGCAGCTCACAGCGCTGAGTTGTCTCATTaGATTTATCCTCCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: MKKSRVLRRAEVGTAAHSAELSH*IYPPHG Trigger: GCCATGTGGAGGATAAATTCAATGAGACAACTCAGC...GCTGTGAGCTGCAGTGCCAACCTCAGCCCGCCTAAGGACCCTACTTTTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAGAAAAGTAGGGTCCTTAGGCGGGCTGAGGTTGGCACTGCAGCTCACAGCCTGGGTTTTCTCTGCTaGAGCAGTCTTCTAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MKKSRVLRRAEVGTAAHSLGFLC*SSLLRS Trigger: ACTTCTTAGAAGACTGCTGCAGCAGAGAAAACCCAG...GCTGTGAGCTGCAGTGCCAACCTCAGCCCGCCTAAGGACCCTACTTTTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR GCA 90 bp | TTCCATGGGGAGCTGAGGGGCTGCCTTGGTGAACTTGACAAGGAAACTGAGAGACTGCTGGGTTTTCTCTaGTGCAGCAGTCTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FHGELRGCLGELDKETERLLGFL*CSSLLR Trigger: TCTTAGAAGACTGCTGCAGCAGAGAAAACCCAGCAG...TCTCTCAGTTTCCTTGTCAAGTTCACCAAGGCAGCCCCTCAGCTCCCCATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAATGGCGGTAACAACCTaGTGGGTTTTCTCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FFSKAEFHHTTGRRTVLQMAVTT*WVFSAA Trigger: TGCAGCAGAGAAAACCCAGCAGGTTGTTACCGCCAT...TTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGTGTTTCTCTGTAGCTTaGCTTTCGTCACCAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLNFTTPQGGGRSCKLALCFSVA*LSSPVF Trigger: AAAAACTGGTGACGAAAGTCAAGCTACAGAGAAACA...CAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACAAAGGGGTTCCTTCTaGCAACCTCATACATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: QKLNFTTPQGGGRSCKLAQRGSF*QPHTYR Trigger: TCTATATGTATGAGGTTGCCAGAAGGAACCCCTTTG...TGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR TCA 90 bp | CAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCAATTGCAAGGCTTCGCTaGGTTGTCTCATTGAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QKLNFTTPQGGGRSCKLAIARLR*VVSLNL Trigger: TAAATTCAATGAGACAACTCAGCGAAGCCTTGCAAT...TGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR TCA 90 bp | CATTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCTTCGTCACCAGTTTTTaGACTCTCTGGACTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HSSQKLNFTTPQGGGRSCFVTSF*TLWTET Trigger: TGTTTCAGTCCAGAGAGTTCAAAAACTGGTGACGAA...GCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR GCA 90 bp | AAACCTTCTATTCCATTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGACAACATGTGGTCGCTaGCTCCTCAAACCAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPSIPFFSKAEFHHTTGRTTCGR*LLKPSS Trigger: GCTGCTTGGTTTGAGGAGGCAGCGACCACATGTTGT...CCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAATGGAATAGAAGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCTCACAGCAACACTGCAGGAATGATGAAGTCACATTGTAAACTGTGTTGTCTCCTGCTGCACCATTaGAAGGCTTCGCTGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAHSNTAGMMKSHCKLCCLLLHH*KASLSC Trigger: ACAACTCAGCGAAGCCTTGCAATGGTGCAGCAGGAG...ACAACACAGTTTACAATGTGACTTCATCATTCCTGCAGTGTTGCTGTGAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTATTCCATTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGAAGGCGAAGTCTGTTTTaGAGCAGTGATCCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFHSSQKLNFTTPQGGGRRSLF*SSDPQQ Trigger: CTGCTGTGGATCACTGCTGCAAAACAGACTTCGCCT...TCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAATGGAATAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCACAGCAACACTGCAGGAATGATGAAGTCACATTGTAAACTGTGTTGTGCTGTTCACAACATGTaGTCGCTGCCTCCTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: AAHSNTAGMMKSHCKLCCAVHNM*SLPPQT Trigger: GGTTTGAGGAGGCAGCGACCACATGTTGTGAACAGC...ACAACACAGTTTACAATGTGACTTCATCATTCCTGCAGTGTTGCTGTGAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTAACAGTGCCTCGAATCCCATCTTTCTTTCCGTTTGTGACCTCATTTCTTACAACATGTGGTCGCTaGCTCCTCAAACCAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVTVPRIPSFFPFVTSFLTTCGR*LLKPSS Trigger: GCTGCTTGGTTTGAGGAGGCAGCGACCACATGTTGT...AAGAAATGAGGTCACAAACGGAAAGAAAGATGGGATTCGAGGCACTGTTACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CCA 90 bp | GTTCACAGACACTTAAACCTTACAGTAACAGTGCCTCGAATCCCATCTTTCTTTCGTCCTGAGGCTTTGTaGGTAGGGCTAGGGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHRHLNLTVTVPRIPSFFRPEAL*VGLGIQ Trigger: CTGAATCCCTAGCCCTACCCACAAAGCCTCAGGACG...AAAGAAAGATGGGATTCGAGGCACTGTTACTGTAAGGTTTAAGTGTCTGTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTATTCCATTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGATCAAAGGATGCTTCCTaGACATACTGGGAAAACGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLFHSSQKLNFTTPQGGGSKDAS*TYWENA Trigger: CGCGTTTTCCCAGTATGTCCAGGAAGCATCCTTTGA...TCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAATGGAATAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCCAGAAACTCAAGTTCACAGACACTTAAACCTTACAGTAACAGTGCCTCAGGTGGCTTTCTGTTaGTGTTCACAACATGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WRPETQVHRHLNLTVTVPQVAFC*CSQHVV Trigger: GACCACATGTTGTGAACAGCAACAGAAAGCCACCTG...AGGCACTGTTACTGTAAGGTTTAAGTGTCTGTGAACTTGAGTTTCTGGCCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAAAGCTGAATTTCACCACCGTCCTGAGGCTTTGTaGGTAGGGCTAGGGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVTEKPSIPFFSKAEFHHRPEAL*VGLGIQ Trigger: CTGAATCCCTAGCCCTACCCACAAAGCCTCAGGACG...GTGGTGAAATTCAGCTTTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCACAGCAACACTGCAGGAATGATGAAGTCACATTGTAAACTGTGTTGTTTGGCATTTCTCTTCTaGATCCAGAGTGGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAHSNTAGMMKSHCKLCCLAFLF*IQSGER Trigger: CCTTTCCCCACTCTGGATCCAGAAGAGAAATGCCAA...ACAACACAGTTTACAATGTGACTTCATCATTCCTGCAGTGTTGCTGTGAGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGAGCATCCTTCATACATaGAAGAAACATCTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQKLNFTTPQGGGRSCKLSILHT*KKHLLR Trigger: TCTTAGAAGATGTTTCTTCCATGTATGAAGGATGCT...CAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR GCA 90 bp | GTTCACAGACACTTAAACCTTACAGTAACAGTGCCTCGAATCCCATCTTTCTTTATGGCGGTAACAACCTaGTGGGTTTTCTCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VHRHLNLTVTVPRIPSFFMAVTT*WVFSAA Trigger: TGCAGCAGAGAAAACCCAGCAGGTTGTTACCGCCAT...AAAGAAAGATGGGATTCGAGGCACTGTTACTGTAAGGTTTAAGTGTCTGTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR GCA 90 bp | AAACCTTCTATTCCATTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGACAGGTTGTCAGAGCTaGCACCATTTCCTTACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPSIPFFSKAEFHHTTGRTGCQS*HHFLTK Trigger: CTTAGTAAGGAAATGGTGGCAGCTCTGACAACCTGT...CCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAATGGAATAGAAGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTAACAGTGCCTCGAATCCCATCTTTCTTTCCGTTTGTGACCTCATTTCTTTGGCTTGAAAGCAGGTaGCTTTCTGTTGCTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVTVPRIPSFFPFVTSFLWLESR*LSVAVH Trigger: GTGAACAGCAACAGAAAGCCACCTGCTTTCAAGCCA...AAGAAATGAGGTCACAAACGGAAAGAAAGATGGGATTCGAGGCACTGTTACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCCTTTTGTAGGAACATGATTCAAGAAAGGGTTACGGAAAAACCTTCTAGACCAGTTCTTCCATaGGGAGCTGAGGGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FIAFCRNMIQERVTEKPSRPVLP*GAEGLP Trigger: AGGCAGCCCCTCAGCTCCCCATGGAAGAACTGGTCT...AGAAGGTTTTTCCGTAACCCTTTCTTGAATCATGTTCCTACAAAAGGCAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| 3UTR CAA 72 bp | TTCTCCTTACTCAGGACAGAATGCAAGAGTCCTGCTTaGGAGGCCAGAAACTCAAGTTCACAGACACTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLLRTECKSPA*EARNSSSQTLK Trigger: TTTAAGTGTCTGTGAACTTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAAGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CCA 90 bp | GTTCACAGACACTTAAACCTTACAGTAACAGTGCCTCGAATCCCATCTTTCTTTTCAAAGGATGCTTCCTaGACATACTGGGAAAACGCG | + |
|
Preference number: 4 (lower is better) Translates to: VHRHLNLTVTVPRIPSFFSKDAS*TYWENA Trigger: CGCGTTTTCCCAGTATGTCCAGGAAGCATCCTTTGA...AAAGAAAGATGGGATTCGAGGCACTGTTACTGTAAGGTTTAAGTGTCTGTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGAAACTCAAGTTCACAGACACTTAAACCTTACAGTAACAGTGCCTCGAATTCAGAATCTCGTTCTTaGCACACATTTTCGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ARNSSSQTLKPYSNSASNSESRS*HTFSLS Trigger: TGAGAGCGAAAATGTGTGTCAAGAACGAGATTCTGA...ATTCGAGGCACTGTTACTGTAAGGTTTAAGTGTCTGTGAACTTGAGTTTCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTCACAGCAACACTGCAGGAATGATGAAGTCACATTGTAAACTGTGTTGTATTGCAAGGCTTCGCTaGGTTGTCTCATTGAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: AAHSNTAGMMKSHCKLCCIARLR*VVSLNL Trigger: TAAATTCAATGAGACAACTCAGCGAAGCCTTGCAAT...ACAACACAGTTTACAATGTGACTTCATCATTCCTGCAGTGTTGCTGTGAGCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTAACAGTGCCTCGAATCCCATCTTTCTTTCCGTTTGTGACCTCATTTCTTCAAAGGGGTTCCTTCTaGCAACCTCATACATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVTVPRIPSFFPFVTSFLQRGSF*QPHTYR Trigger: TCTATATGTATGAGGTTGCCAGAAGGAACCCCTTTG...AAGAAATGAGGTCACAAACGGAAAGAAAGATGGGATTCGAGGCACTGTTACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTAGGAACATGATTCAAGAAAGGGTTACGGAAAAACCTTCTATTCCATTCGCTGTTCACAACATGTaGTCGCTGCCTCCTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: FCRNMIQERVTEKPSIPFAVHNM*SLPPQT Trigger: GGTTTGAGGAGGCAGCGACCACATGTTGTGAACAGC...GAATGGAATAGAAGGTTTTTCCGTAACCCTTTCTTGAATCATGTTCCTACAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTACTCAGGACAGAATGCAAGAGTCCTGCTTTGGAGGCCAGAAACTCAAAGCATCCTTCATACATaGAAGAAACATCTTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPYSGQNARVLLWRPETQSILHT*KKHLLR Trigger: TCTTAGAAGATGTTTCTTCCATGTATGAAGGATGCT...TTGAGTTTCTGGCCTCCAAAGCAGGACTCTTGCATTCTGTCCTGAGTAAGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCACAGCAACACTGCAGGAATGATGAAGTCACATTGTAAACTGTGTTGTTGTTTTGAACAAATATaGTTCACAACCTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAHSNTAGMMKSHCKLCCCFEQI*FTTWLW Trigger: CCAGAGCCAGGTTGTGAACCATATTTGTTCAAAACA...ACAACACAGTTTACAATGTGACTTCATCATTCCTGCAGTGTTGCTGTGAGCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
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| CDS-3UTR GCA 90 bp | ATTCAAGAAAGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAAAGCTGAATTGTGTGATGGGAGCTaGCTTGGCTTGAAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IQERVTEKPSIPFFSKAELCDGS*LGLKAG Trigger: ACCTGCTTTCAAGCCAAGGCAGCTCCCATCACACAA...TTCAGCTTTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCTTTCTTGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR TCA 90 bp | CATGATTCAAGAAAGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAAAGCTCCACTTCACCAAGTTaGCCAGAAACCTGTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HDSRKGYGKTFYSILLKSSTSPS*PETCVS Trigger: AGAAACACAGGTTTCTGGTCAACTTGGTGAAGTGGA...GCTTTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCTTTCTTGAATCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAAAGCTGAATTTCACCCTGGGTTTTCTCTGCTaGAGCAGTCTTCTAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGLRKNLLFHSSQKLNFTLGFLC*SSLLRS Trigger: ACTTCTTAGAAGACTGCTGCAGCAGAGAAAACCCAG...GGTGAAATTCAGCTTTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTGCCTTTTGTAGGAACATGATTCAAGAAAGGGTTACGGAAAAACCTTCTTTGGCATTTCTCTTCTaGATCCAGAGTGGGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIAFCRNMIQERVTEKPSLAFLF*IQSGER Trigger: CCTTTCCCCACTCTGGATCCAGAAGAGAAATGCCAA...AGAAGGTTTTTCCGTAACCCTTTCTTGAATCATGTTCCTACAAAAGGCAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGAAAGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAAAGCTGAAGCTGAGTTGTCTCATTaGATTTATCCTCCACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQERVTEKPSIPFFSKAEAELSH*IYPPHG Trigger: GCCATGTGGAGGATAAATTCAATGAGACAACTCAGC...TTCAGCTTTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCTTTCTTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR TCA 90 bp | TTTATTGCCTTTTGTAGGAACATGATTCAAGAAAGGGTTACGGAAAAACCTTCTCTTTTAAATATTGTGTaGTGGGAGCTGCCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIAFCRNMIQERVTEKPSLLNIV*WELPWL Trigger: AAGCCAAGGCAGCTCCCATCACACAATATTTAAAAG...AGAAGGTTTTTCCGTAACCCTTTCTTGAATCATGTTCCTACAAAAGGCAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR TCA 90 bp | GAACATGATTCAAGAAAGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAATCAGAATCTCGTTCTTaGCACACATTTTCGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EHDSRKGYGKTFYSILLKSESRS*HTFSLS Trigger: TGAGAGCGAAAATGTGTGTCAAGAACGAGATTCTGA...TTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCTTTCTTGAATCATGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | AAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGAGCTCCTGGAACTGTTaGCACTCCTGCTGCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: KLNFTTPQGGGRSCKLALSSWNC*HSCCTI Trigger: AATGGTGCAGCAGGAGTGCAAACAGTTCCAGGAGCT...CAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS TCA 90 bp | GCCACCATTTCCTTACTAAGGGAGACCAGTTCTTCCATGGGGAGCTaGGGGGCTGCCTTGGTGAACTTGACAAGGAAATGGCGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATISLLRETSSSMGS*GAALVNLTRKWRCR Trigger: TCTGCAGCGCCATTTCCTTGTCAAGTTCACCAAGGCAGCCCCTCAGCTCCCCATGGAAGAACTGGTCTCCCTTAGTAAGGAAATGGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS CCA 90 bp | CCTTGGCTTGAAAGCAGGTGGCTTTCTGTTGCTGTTCACAACATGTaGTCGCTGCCTCCTCAAACCAAGCAGCCACGGCTAGAAGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: PWLESRWLSVAVHNM*SLPPQTKQPRLEER Trigger: CCGTTCTTCTAGCCGTGGCTGCTTGGTTTGAGGAGGCAGCGACCACATGTTGTGAACAGCAACAGAAAGCCACCTGCTTTCAAGCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCACTGGCTTTGGAACTCAGCAAAGAACTaGTCCGGGTCAGAATCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: ISPHHRAEDGPANWHWLWNSAKN*SGSESR Trigger: ACGAGATTCTGACCCGGACAAGTTCTTTGCTGAGTT...CCAAAGCCAGTGCCAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | TTCCATGGGGAGCTGAGGGGCTGCCTTGGTGAACTTGACAAGGAAACTGAGAGAACTCCTGCTGCACCATaGCAAGGCTTCGCTGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FHGELRGCLGELDKETERTPAAP*QGFAEL Trigger: CAACTCAGCGAAGCCTTGCAATGGTGCAGCAGGAGT...TCTCTCAGTTTCCTTGTCAAGTTCACCAAGGCAGCCCCTCAGCTCCCCATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS GCA 90 bp | TTCCTTACTAAGGGAGACCAGTTCTTCCATGGGGAGCTGAGGGGCTaGCTTGGTGAACTTGACAAGGAAATGGCGCTGCAGAGTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLTKGDQFFHGELRG*LGELDKEMALQSVL Trigger: AAGGACACTCTGCAGCGCCATTTCCTTGTCAAGTTCACCAAGGCAGCCCCTCAGCTCCCCATGGAAGAACTGGTCTCCCTTAGTAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | TCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAACTGGCAGGTGGCTTTCTGTaGCTGTTCACAACATGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQKLNFTTPQGGGRSCKLAGGFL*LFTTCG Trigger: ACCACATGTTGTGAACAGCAACAGAAAGCCACCTGC...CAGTTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS TCA 90 bp | CTGGAAGTGTGTTGTCAGCCCAGCACCTATCCCTGTAATCCAGCATaGCTTTCACCAGCGTTTCCACCTCATCAAAGGATGCTTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LEVCCQPSTYPCNPA*LSPAFPPHQRMLPG Trigger: TCCAGGAAGCATCCTTTGATGAGGTGGAAACGCTGGTGAAAGTCATGCTGGATTACAGGGATAGGTGCTGGGCTGACAACACACTTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS GCA 90 bp | GTCCTTCCCCAGCTCCTGGAACTGTTTGCACTCCTGCTGCACCATTaGAAGGCTTCGCTGAGTTGTCTCATTGAATTTATCCTCCACATG | + |
|
Preference number: 5 (lower is better) Translates to: VLPQLLELFALLLHH*KASLSCLIEFILHM Trigger: CATGTGGAGGATAAATTCAATGAGACAACTCAGCGAAGCCTTGCAATGGTGCAGCAGGAGTGCAAACAGTTCCAGGAGCTGGGGAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAAAAGTAGGGTCCTTAGGCGGGCTGAGGTTGGCACTGCAGCTCACAGCGTCAGAATCTCGTTCTaGACACACATTTTCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MKKSRVLRRAEVGTAAHSVRISF*THIFAL Trigger: GAGAGCGAAAATGTGTGTCAAGAACGAGATTCTGAC...GCTGTGAGCTGCAGTGCCAACCTCAGCCCGCCTAAGGACCCTACTTTTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS TCA 90 bp | TGCACTCCTGCTGCACCATTGCAAGGCTTCGCTGAGTTGTCTCATTaGATTTATCCTCCACATGGCGGTAACAACCTGCTGGGTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CTPAAPLQGFAELSH*IYPPHGGNNLLGFL Trigger: GAGAAAACCCAGCAGGTTGTTACCGCCATGTGGAGGATAAATTCAATGAGACAACTCAGCGAAGCCTTGCAATGGTGCAGCAGGAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS CCA 90 bp | AGCATGACTTTCACCAGCGTTTCCACCTCATCAAAGGATGCTTCCTaGACATACTGGGAAAACGCGATGATGGCCAGGTATGTCGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMTFTSVSTSSKDAS*TYWENAMMARYVVF Trigger: GAACACGACATACCTGGCCATCATCGCGTTTTCCCAGTATGTCCAGGAAGCATCCTTTGATGAGGTGGAAACGCTGGTGAAAGTCATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS GCA 90 bp | GTAATCCAGCATGACTTTCACCAGCGTTTCCACCTCATCAAAGGATaGTTCCTGGACATACTGGGAAAACGCGATGATGGCCAGGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: VIQHDFHQRFHLIKG*FLDILGKRDDGQVC Trigger: ACATACCTGGCCATCATCGCGTTTTCCCAGTATGTCCAGGAAGCATCCTTTGATGAGGTGGAAACGCTGGTGAAAGTCATGCTGGATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS GCA 90 bp | AGTGCGGAGACTGATGGGAGCTCATACGTTGTATCAGCTTTCAGATaGTCAAAGCAGTGTCTTCTGAAGGCGAAGTCTGTTTTGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAETDGSSYVVSAFR*SKQCLLKAKSVLQQ Trigger: CTGCTGCAAAACAGACTTCGCCTTCAGAAGACACTGCTTTGAGCATCTGAAAGCTGATACAACGTATGAGCTCCCATCAGTCTCCGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | GGACCATTTGACAGCCATGCTAGGAATAAGATGAAGAAAAGTAGGGTCCTTAGGAGAAACAGAGTCTTCTaGGAAAGCCGGCTTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GPFDSHARNKMKKSRVLRRNRVF*ESRLSR Trigger: GCGGGAAAGCCGGCTTTCCAAGAAGACTCTGTTTCT...CCTAAGGACCCTACTTTTCTTCATCTTATTCCTAGCATGGCTGTCAAATGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CAA 90 bp | CATTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCTTGTTTCTCTGTAGCTaGACTTTCGTCACCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSSQKLNFTTPQGGGRSCLFLCS*TFVTSF Trigger: AAAACTGGTGACGAAAGTCAAGCTACAGAGAAACAA...GCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS CCA 90 bp | AGTGAACTTTGTGAACAAGCACAGCCACTCCTCATCCGTGATCCCTaGCATCCACTTCACCAAGTTGACCAGAAACCTGTGTTTCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: SELCEQAQPLLIRDP*HPLHQVDQKPVFLI Trigger: AATAAGAAACACAGGTTTCTGGTCAACTTGGTGAAGTGGATGCCAGGGATCACGGATGAGGAGTGGCTGTGCTTGTTCACAAAGTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGAAACTCAAGTTCACAGACACTTAAACCTTACAGTAACAGTGCCTCGAATAGCTCCTGGAACTGTTaGCACTCCTGCTGCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: ARNSSSQTLKPYSNSASNSSWNC*HSCCTI Trigger: AATGGTGCAGCAGGAGTGCAAACAGTTCCAGGAGCT...ATTCGAGGCACTGTTACTGTAAGGTTTAAGTGTCTGTGAACTTGAGTTTCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS TCA 90 bp | GAAGATGATGCTTTTAAATATTGTGTGATGGGAGCTGCCTTGGCTTaGAAGCAGGTGGCTTTCTGTTGCTGTTCACAACATGTGGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: EDDAFKYCVMGAALA*KQVAFCCCSQHVVA Trigger: AGCGACCACATGTTGTGAACAGCAACAGAAAGCCACCTGCTTTCAAGCCAAGGCAGCTCCCATCACACAATATTTAAAAGCATCATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGACGGTCCTGCAAAATAGAGTTTAAGACCTaGGGTCCAAACTTTATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQKLNFTTPQGGGRSCKIEFKT*GPNFIR Trigger: CCTTATAAAGTTTGGACCCAAGGTCTTAAACTCTAT...TTTGCAGGACCGTCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | CTTCTATTCCATTCTTCTCAAAAGCTGAATTTCACCACACCACAGGGCGGAGGATCGCTCTCAGTGAATTaGGCTTCTCTGAGAGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLFHSSQKLNFTTPQGGGSLSVN*ASLRDK Trigger: CTTATCTCTCAGAGAAGCCAAATTCACTGAGAGCGA...TCCTCCGCCCTGTGGTGTGGTGAAATTCAGCTTTTGAGAAGAATGGAATAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS TCA 90 bp | TGCTCAAAGCAGTGTCTTCTGAAGGCGAAGTCTGTTTTGCAGCAGTaGTCCACAGCAGGATTGATAGTTCGATTTGTATTTACCCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: CSKQCLLKAKSVLQQ*STAGLIVRFVFTPH Trigger: ATGTGGGGTAAATACAAATCGAACTATCAATCCTGCTGTGGATCACTGCTGCAAAACAGACTTCGCCTTCAGAAGACACTGCTTTGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | GTTCACAGACACTTAAACCTTACAGTAACAGTGCCTCGAATCCCATCTTTCTTTGCAGGTGGCTTTCTGTaGCTGTTCACAACATGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VHRHLNLTVTVPRIPSFFAGGFL*LFTTCG Trigger: ACCACATGTTGTGAACAGCAACAGAAAGCCACCTGC...AAAGAAAGATGGGATTCGAGGCACTGTTACTGTAAGGTTTAAGTGTCTGTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGAAAGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAAAGCTGAAGGGAGCTGCCTTGGCTaGAAAGCAGGTGGCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IQERVTEKPSIPFFSKAEGSCLG*KAGGFL Trigger: CAGAAAGCCACCTGCTTTCAAGCCAAGGCAGCTCCC...TTCAGCTTTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCTTTCTTGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | AACAGTGCCTCGAATCCCATCTTTCTTTCCGTTTGTGACCTCATTTCTTGTCAAAACTCAGCAAAGAACTaGTCCGGGTCAGAATCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: NSASNPIFLSVCDLISCQNSAKN*SGSESR Trigger: ACGAGATTCTGACCCGGACAAGTTCTTTGCTGAGTT...TTGACAAGAAATGAGGTCACAAACGGAAAGAAAGATGGGATTCGAGGCACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTAACAGTGCCTCGAATCCCATCTTTCTTTCCGTTTGTGACCTCATTTCTTTCGCTCTCAGTGAATTaGGCTTCTCTGAGAGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVTVPRIPSFFPFVTSFLSLSVN*ASLRDK Trigger: CTTATCTCTCAGAGAAGCCAAATTCACTGAGAGCGA...AAGAAATGAGGTCACAAACGGAAAGAAAGATGGGATTCGAGGCACTGTTACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAAAGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAAAGCTGAATTTACTCCTGCTGCACCATaGCAAGGCTTCGCTGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QERVTEKPSIPFFSKAEFTPAAP*QGFAEL Trigger: CAACTCAGCGAAGCCTTGCAATGGTGCAGCAGGAGT...AAATTCAGCTTTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCTTTCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | TTTTGTAGGAACATGATTCAAGAAAGGGTTACGGAAAAACCTTCTATTCCATTCAGAAACAGAGTCTTCTaGGAAAGCCGGCTTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FCRNMIQERVTEKPSIPFRNRVF*ESRLSR Trigger: GCGGGAAAGCCGGCTTTCCAAGAAGACTCTGTTTCT...GAATGGAATAGAAGGTTTTTCCGTAACCCTTTCTTGAATCATGTTCCTACAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAAAGCTGAATTTCACCACATCCACTTCACCAAGTaGACCAGAAACCTGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVTEKPSIPFFSKAEFHHIHFTK*TRNLCF Trigger: GAAACACAGGTTTCTGGTCAACTTGGTGAAGTGGAT...GTGGTGAAATTCAGCTTTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS-3UTR CAA 90 bp | AACAGTGCCTCGAATCCCATCTTTCTTTCCGTTTGTGACCTCATTTCTTGTCAAATAGAGTTTAAGACCTaGGGTCCAAACTTTATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSASNPIFLSVCDLISCQIEFKT*GPNFIR Trigger: CCTTATAAAGTTTGGACCCAAGGTCTTAAACTCTAT...TTGACAAGAAATGAGGTCACAAACGGAAAGAAAGATGGGATTCGAGGCACTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128740.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAAAGGGTTACGGAAAAACCTTCTATTCCATTCTTCTCAAAAGCTGAATTTGTCAGAATCTCGTTCTaGACACACATTTTCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QERVTEKPSIPFFSKAEFVRISF*THIFAL Trigger: GAGAGCGAAAATGTGTGTCAAGAACGAGATTCTGAC...AAATTCAGCTTTTGAGAAGAATGGAATAGAAGGTTTTTCCGTAACCCTTTCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS GCA 72 bp | GCTGCAGAGTGTCCTTCCCCAGCTCCTGGAACTGTTTaGACTCCTGCTGCACCATTGCAAGGCTTCGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AAECPSPAPGTV*TPAAPLQGFAE Trigger: CTCAGCGAAGCCTTGCAATGGTGCAGCAGGAGTGCAAACAGTTCCAGGAGCTGGGGAAGGACACTCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS CCA 72 bp | AGGAAATGGCGCTGCAGAGTGTCCTTCCCCAGCTCCTaGAACTGTTTGCACTCCTGCTGCACCATTGCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RKWRCRVSFPSS*NCLHSCCTIAR Trigger: CCTTGCAATGGTGCAGCAGGAGTGCAAACAGTTCCAGGAGCTGGGGAAGGACACTCTGCAGCGCCATTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS GCA 72 bp | TTTGAACTCTCTGGACTGAAACAGGACTCAGGCTCCTaGACTTCGCTGCACTCCTCCCTGGCAGCAGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FELSGLKQDSGS*TSLHSSLAAVN Trigger: GTTCACTGCTGCCAGGGAGGAGTGCAGCGAAGTGCAGGAGCCTGAGTCCTGTTTCAGTCCAGAGAGTTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS TCA 72 bp | CAGAGTCTTCTTGGAAAGCCGGCTTTCCCGCAGCAATaGGAAAAGTTGTGCTTCTGCGGCAGTCCCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: QSLLGKPAFPQQ*EKLCFCGSPSM Trigger: CATGGAGGGACTGCCGCAGAAGCACAACTTTTCTCATTGCTGCGGGAAAGCCGGCTTTCCAAGAAGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS CCA 72 bp | GAAAGCAGGTGGCTTTCTGTTGCTGTTCACAACATGTaGTCGCTGCCTCCTCAAACCAAGCAGCCACGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: ESRWLSVAVHNM*SLPPQTKQPRL Trigger: TAGCCGTGGCTGCTTGGTTTGAGGAGGCAGCGACCACATGTTGTGAACAGCAACAGAAAGCCACCTGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS CAA 72 bp | GGGAGCTGCCTTGGCTTGAAAGCAGGTGGCTTTCTGTaGCTGTTCACAACATGTGGTCGCTGCCTCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GSCLGLKAGGFL*LFTTCGRCLLK Trigger: TTTGAGGAGGCAGCGACCACATGTTGTGAACAGCAACAGAAAGCCACCTGCTTTCAAGCCAAGGCAGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS TCA 72 bp | AATCTGCCAAGTTGTCAACGCAGGCGAACTCGTCACTaGGAGTGCAACAGGTTGTCAGAGCTGCCACCATTT | + |
|
Preference number: 6 (lower is better) Translates to: NLPSCQRRRTRH*ECNRLSELPPF Trigger: AAATGGTGGCAGCTCTGACAACCTGTTGCACTCTCAGTGACGAGTTCGCCTGCGTTGACAACTTGGCAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS TCA 72 bp | TGTTGTCAGCCCAGCACCTATCCCTGTAATCCAGCATaGCTTTCACCAGCGTTTCCACCTCATCAAAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: CCQPSTYPCNPA*LSPAFPPHQRM Trigger: CATCCTTTGATGAGGTGGAAACGCTGGTGAAAGTCATGCTGGATTACAGGGATAGGTGCTGGGCTGACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS TCA 72 bp | GCTGCACCATTGCAAGGCTTCGCTGAGTTGTCTCATTaGATTTATCCTCCACATGGCGGTAACAACCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AAPLQGFAELSH*IYPPHGGNNLL Trigger: CAGCAGGTTGTTACCGCCATGTGGAGGATAAATTCAATGAGACAACTCAGCGAAGCCTTGCAATGGTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS GCA 72 bp | CATGACTTTCACCAGCGTTTCCACCTCATCAAAGGATaGTTCCTGGACATACTGGGAAAACGCGATGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: HDFHQRFHLIKG*FLDILGKRDDG Trigger: GCCATCATCGCGTTTTCCCAGTATGTCCAGGAAGCATCCTTTGATGAGGTGGAAACGCTGGTGAAAGTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS CCA 72 bp | GTTTCCACCTCATCAAAGGATGCTTCCTGGACATACTaGGAAAACGCGATGATGGCCAGGTATGTCGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VSTSSKDASWTY*ENAMMARYVVF Trigger: GAACACGACATACCTGGCCATCATCGCGTTTTCCCAGTATGTCCAGGAAGCATCCTTTGATGAGGTGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS CCA 72 bp | TTCACCAGCGTTTCCACCTCATCAAAGGATGCTTCCTaGACATACTGGGAAAACGCGATGATGGCCAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: FTSVSTSSKDAS*TYWENAMMARY Trigger: ATACCTGGCCATCATCGCGTTTTCCCAGTATGTCCAGGAAGCATCCTTTGATGAGGTGGAAACGCTGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS GCA 72 bp | CCTCCACATGGCGGTAACAACCTGCTGGGTTTTCTCTaGTGCAGCAGTCTTCTAAGAAGTCCATATACACTT | + |
|
Preference number: 6 (lower is better) Translates to: PPHGGNNLLGFL*CSSLLRSPYTL Trigger: AAGTGTATATGGACTTCTTAGAAGACTGCTGCAGCAGAGAAAACCCAGCAGGTTGTTACCGCCATGTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS GCA 72 bp | CAGCTCCTGGAACTGTTTGCACTCCTGCTGCACCATTaGAAGGCTTCGCTGAGTTGTCTCATTGAATTTATC | + |
|
Preference number: 6 (lower is better) Translates to: QLLELFALLLHH*KASLSCLIEFI Trigger: GATAAATTCAATGAGACAACTCAGCGAAGCCTTGCAATGGTGCAGCAGGAGTGCAAACAGTTCCAGGAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS CAA 72 bp | ACCCCACATAACTCTCCAAGAACTAAATCTGCCAAGTaGTCAACGCAGGCGAACTCGTCACTGAGAGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TPHNSPRTKSAK*STQANSSLRVQ Trigger: TTGCACTCTCAGTGACGAGTTCGCCTGCGTTGACAACTTGGCAGATTTAGTTCTTGGAGAGTTATGTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS TCA 72 bp | CCAGTCTGTATGCAAAGCAGATACAAGTGCGGAGACTaGTGGGAGCTCATACGTTGTATCAGCTTTCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: PVCMQSRYKCGD*WELIRCISFQM Trigger: CATCTGAAAGCTGATACAACGTATGAGCTCCCATCAGTCTCCGCACTTGTATCTGCTTTGCATACAGACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS CAA 72 bp | CAGATACAAGTGCGGAGACTGATGGGAGCTCATACGTaGTATCAGCTTTCAGATGCTCAAAGCAGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QIQVRRLMGAHT*YQLSDAQSSVF Trigger: GAAGACACTGCTTTGAGCATCTGAAAGCTGATACAACGTATGAGCTCCCATCAGTCTCCGCACTTGTATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS CAA 90 bp | TTTGTATTTACCCCACATAACTCTCCAAGAACTAAATCTGCCAAGTaGTCAACGCAGGCGAACTCGTCACTGAGAGTGCAACAGGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: FVFTPHNSPRTKSAK*STQANSSLRVQQVV Trigger: GACAACCTGTTGCACTCTCAGTGACGAGTTCGCCTGCGTTGACAACTTGGCAGATTTAGTTCTTGGAGAGTTATGTGGGGTAAATACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS TCA 72 bp | TTGTATCAGCTTTCAGATGCTCAAAGCAGTGTCTTCTaGAGGCGAAGTCTGTTTTGCAGCAGTGATCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LYQLSDAQSSVF*RRSLFCSSDPQ Trigger: CTGTGGATCACTGCTGCAAAACAGACTTCGCCTTCAGAAGACACTGCTTTGAGCATCTGAAAGCTGATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS TCA 72 bp | TTGTTTCTCTGTAGCTTGACTTTCGTCACCAGTTTTTaGACTCTCTGGACTGAAACAGGACTCAGGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFLCSLTFVTSF*TLWTETGLRLL Trigger: CAGGAGCCTGAGTCCTGTTTCAGTCCAGAGAGTTCAAAAACTGGTGACGAAAGTCAAGCTACAGAGAAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS GCA 72 bp | ACTGATGGGAGCTCATACGTTGTATCAGCTTTCAGATaGTCAAAGCAGTGTCTTCTGAAGGCGAAGTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TDGSSYVVSAFR*SKQCLLKAKSV Trigger: AACAGACTTCGCCTTCAGAAGACACTGCTTTGAGCATCTGAAAGCTGATACAACGTATGAGCTCCCATCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
||
| CDS TCA 72 bp | GCTTTTAAATATTGTGTGATGGGAGCTGCCTTGGCTTaGAAGCAGGTGGCTTTCTGTTGCTGTTCACAACAT | + |
|
Preference number: 6 (lower is better) Translates to: AFKYCVMGAALA*KQVAFCCCSQH Trigger: ATGTTGTGAACAGCAACAGAAAGCCACCTGCTTTCAAGCCAAGGCAGCTCCCATCACACAATATTTAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
||
| CDS TCA 72 bp | TCAGCAAAGAACTTGTCCGGGTCAGAATCTCGTTCTTaGCACACATTTTCGCTCTCAGTGAATTTGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SAKNLSGSESRS*HTFSLSVNLAS Trigger: AGAAGCCAAATTCACTGAGAGCGAAAATGTGTGTCAAGAACGAGATTCTGACCCGGACAAGTTCTTTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
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| CDS TCA 72 bp | CAGTGTCTTCTGAAGGCGAAGTCTGTTTTGCAGCAGTaGTCCACAGCAGGATTGATAGTTCGATTTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: QCLLKAKSVLQQ*STAGLIVRFVF Trigger: AAATACAAATCGAACTATCAATCCTGCTGTGGATCACTGCTGCAAAACAGACTTCGCCTTCAGAAGACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113179.9 |
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| CDS CAA 72 bp | TTACTGAATACAGCAACGTTTATAGAGTTTAAGACCTaGGGTCCAAACTTTATAAGGGCTCCACAAACATTT | + |
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Preference number: 6 (lower is better) Translates to: LLNTATFIEFKT*GPNFIRAPQTF Trigger: AAATGTTTGTGGAGCCCTTATAAAGTTTGGACCCAAGGTCTTAAACTCTATAAACGTTGCTGTATTCAGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113179.9 ENSMUST00000128740.2 |
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