Pregenerated sensors for AFG3L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031967Ensembl transcript IDs: ENSMUST00000001520.13, ENSMUST00000098320.6
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAGGACAGGCCTCCACCATCCTGGCCAGGCACCCGGGAAGCTATaGCATCAGCTGAAAGGCAGGAGGGTCGGTAGCGTGCCTGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: RRTGLHHPGQAPGKL*HQLKGRRVGSVPVH Trigger: GTGCACAGGCACGCTACCGACCCTCCTGCCTTTCAGCTGATGCCATAGCTTCCCGGGTGCCTGGCCAGGATGGTGGAGGCCTGTCCTTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR CCA 90 bp | CTCTGTGTAGCCCTGGCTGCCCTGAACTCACTCTGTAAACCAGGCTaGCCTCGAACTCAGGAATCAAGCCTGCCTCTGCCTCCCGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: LCVALAALNSLCKPG*PRTQESSLPLPPEC Trigger: GCACTCGGGAGGCAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTGGTTTACAGAGTGAGTTCAGGGCAGCCAGGGCTACACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR CCA 90 bp | CCCAGATTAACAGGAAAGAGAGGCCTCTTGCAGCCCACGGAGGCTTaGCGTTCCAAAGCCCTCCCCATGCACCAGAGCCAGAGGGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: PRLTGKRGLLQPTEA*RSKALPMHQSQRAQ Trigger: TTGAGCCCTCTGGCTCTGGTGCATGGGGAGGGCTTTGGAACGCCAAGCCTCCGTGGGCTGCAAGAGGCCTCTCTTTCCTGTTAATCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR GCA 90 bp | CTTTCAGCCCCTCAGGAAGGGATGTGTCCTCCTCTAGGCTGCCGGTaGCCTCTACAAATTCCTCATAGGTGGACTTCTCTGCAAAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: LSAPQEGMCPPLGCR*PLQIPHRWTSLQRA Trigger: GGCCCTTTGCAGAGAAGTCCACCTATGAGGAATTTGTAGAGGGCACCGGCAGCCTAGAGGAGGACACATCCCTTCCTGAGGGGCTGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR GCA 90 bp | GCACTGGGCAGGCAGAGACGGGAGGATCCCTGGGGCTTGCTGACCTaGAAACACAGCCAGACTCAATACGAGACTCCATCTAAAAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: ALGRQRREDPWGLLT*KHSQTQYETPSKKQ Trigger: TTGCTTTTTAGATGGAGTCTCGTATTGAGTCTGGCTGTGTTTGCAGGTCAGCAAGCCCCAGGGATCCTCCCGTCTCTGCCTGCCCAGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR CCA 90 bp | GGGTGGCCACGGTCCCTGTCCTCCACTGCACATCTACTGGTGCGCTaGCTTTCCTTCCTAAGGGCTGAGCAGCTTCCTTCCTTTTTATTT | + |
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Preference number: 1 (lower is better) Translates to: GWPRSLSSTAHLLVR*LSFLRAEQLPSFLF Trigger: AAATAAAAAGGAAGGAAGCTGCTCAGCCCTTAGGAAGGAAAGCCAGCGCACCAGTAGATGTGCAGTGGAGGACAGGGACCGTGGCCACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR CCA 90 bp | ACTCCATCTAAAAAGCAAGGTAGACTGGGTGGCGAGATGGCTCAGTaGGTAGAGGCGCCTCTGCCAAGCCTGATGATCTCTGGAACCCAC | + |
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Preference number: 1 (lower is better) Translates to: TPSKKQGRLGGEMAQ*VEAPLPSLMISGTH Trigger: GTGGGTTCCAGAGATCATCAGGCTTGGCAGAGGCGCCTCTACCCACTGAGCCATCTCGCCACCCAGTCTACCTTGCTTTTTAGATGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR GCA 90 bp | TCCAGTCTTTCAGCCCCTCAGGAAGGGATGTGTCCTCCTCTAGGCTaGCGGTGCCCTCTACAAATTCCTCATAGGTGGACTTCTCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: SSLSAPQEGMCPPLG*RCPLQIPHRWTSLQ Trigger: TTGCAGAGAAGTCCACCTATGAGGAATTTGTAGAGGGCACCGGCAGCCTAGAGGAGGACACATCCCTTCCTGAGGGGCTGAAAGACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR CCA 90 bp | CAGTATAGTCTTTACATCCAGCTAATACACCCAGTCCACCCAATCTaGCCCTTAGCCGGGCCCCAAAGAGAAGGACAGGCCTCCACCATC | + |
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Preference number: 1 (lower is better) Translates to: QYSLYIQLIHPVHPI*PLAGPQREGQASTI Trigger: GATGGTGGAGGCCTGTCCTTCTCTTTGGGGCCCGGCTAAGGGCCAGATTGGGTGGACTGGGTGTATTAGCTGGATGTAAAGACTATACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR CCA 90 bp | GCACCGGACCTCTTCATCAATGAGCTGGGCAGTAGCCTCACTGTATaGCTTCTCCACCATGGTTTCGCCTTGTCTGGGGAAGTCAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: APDLFINELGSSLTV*LLHHGFALSGEVKG Trigger: TCCTTTGACTTCCCCAGACAAGGCGAAACCATGGTGGAGAAGCCATACAGTGAGGCTACTGCCCAGCTCATTGATGAAGAGGTCCGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR GCA 90 bp | ACTCCAGAGGTTGTCCTGTGCCCTGCGCATGTGCACCGTGGTGCGTaGGTGTGCAGATGTAAGTGGAAAACAGTAGAGATAGAAAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: TPEVVLCPAHVHRGA*VCRCKWKTVEIESS Trigger: ACTGCTTTCTATCTCTACTGTTTTCCACTTACATCTGCACACGCACGCACCACGGTGCACATGCGCAGGGCACAGGACAACCTCTGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR CCA 90 bp | CCTGTTTTAATTAGTCTTTCAGTTACTCTGACAGCTGCTCTGCGATaGCTGAGCAGCTCCCAGTCAGCAGTGGTCATAAGCCGCCCCGGT | + |
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Preference number: 1 (lower is better) Translates to: PVLISLSVTLTAALR*LSSSQSAVVISRPG Trigger: ACCGGGGCGGCTTATGACCACTGCTGACTGGGAGCTGCTCAGCCATCGCAGAGCAGCTGTCAGAGTAACTGAAAGACTAATTAAAACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR CCA 90 bp | TGGAAACTTAATCAAACACAATGTAGCTCCTCACAGCCCCACACCTaGAATCCCTCCAAAAAGACATCACTCAGGCTTCACAGAACCTGG | + |
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Preference number: 1 (lower is better) Translates to: WKLNQTQCSSSQPHT*NPSKKTSLRLHRTW Trigger: CCAGGTTCTGTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGTGGGGCTGTGAGGAGCTACATTGTGTTTGATTAAGTTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR TCA 90 bp | ACTGTCTTATGTTTTCTTTACTTCTTCACCAACCTTTATCTGTGCTaGGTCAGGGCTCAGCCCTTGAGCAGGTTACCTCAGAAGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: TVLCFLYFFTNLYLC*VRAQPLSRLPQKQL Trigger: CAGCTGCTTCTGAGGTAACCTGCTCAAGGGCTGAGCCCTGACTCAGCACAGATAAAGGTTGGTGAAGAAGTAAAGAAAACATAAGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR TCA 90 bp | ACACCCAGTCCACCCAATCTGGCCCTTAGCCGGGCCCCAAAGAGAAGGACAGGCGCTCCCGGCACTGTGTaGGCAGCTCCAGGGTCCGAT | + |
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Preference number: 2 (lower is better) Translates to: TPSPPNLALSRAPKRRTGAPGTV*AAPGSD Trigger: ATCGGACCCTGGAGCTGCTCACACAGTGCCGGGAGC...GCCTGTCCTTCTCTTTGGGGCCCGGCTAAGGGCCAGATTGGGTGGACTGGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | AGAATTTCTGACGCTGCCACAGGTGGGGTGGCCACGGTCCCTGTCCTCCACTGCCATAAGCCGCCCCGGTaGCCACAGGCTACACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RISDAATGGVATVPVLHCHKPPR*PQATQG Trigger: GCCCTGTGTAGCCTGTGGCCACCGGGGCGGCTTATG...GCAGTGGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAGCGTCAGAAATTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGCTGGCCTCGAACTCAGGAATCAAGCCTGCCTCTGCCTCCCGAGTGCTGCCAAAGCCCTCCCCATaGACCAGAGCCAGAGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: TRLASNSGIKPASASRVLPKPSP*TRARGL Trigger: GAGCCCTCTGGCTCTGGTGCATGGGGAGGGCTTTGG...CAGCACTCGGGAGGCAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | CATCGTTCACGGAACGGCCAGGATAAAGGTGAGCCTGCAATCCCAGCACTGGGCCTGCCACAGGTGGGGTaGCCACGGTCCCTGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: HRSRNGQDKGEPAIPALGLPQVG*PRSLSS Trigger: GGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAG...GCCCAGTGCTGGGATTGCAGGCTCACCTTTATCCTGGCCGTTCCGTGAACGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR CAA 90 bp | GCCCAGATTAACAGGAAAGAGAGGCCTCTTGCAGCCCACGGAGGCTaGGCGTTCCAAAGCCCTCCCCATGCACCAGAGCCAGAGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: AQINRKERPLAAHGG*AFQSPPHAPEPEGS Trigger: TGAGCCCTCTGGCTCTGGTGCATGGGGAGGGCTTTGGAACGCCAAGCCTCCGTGGGCTGCAAGAGGCCTCTCTTTCCTGTTAATCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCCTCCACCATCCTGGCCAGGCACCCGGGAAGCTATGGCATCAGCTGAATCAGGGCTCAGCCCTTaGGCAGGTTACCTCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: DRPPPSWPGTREAMASAESGLSP*AGYLRS Trigger: GCTTCTGAGGTAACCTGCTCAAGGGCTGAGCCCTGA...TTCAGCTGATGCCATAGCTTCCCGGGTGCCTGGCCAGGATGGTGGAGGCCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | CCATGCACCAGAGCCAGAGGGCTCAACCTAAACCACCCTCTGTGGTTCAAAAGGCTGCCACAGGTGGGGTaGCCACGGTCCCTGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PCTRARGLNLNHPLWFKRLPQVG*PRSLSS Trigger: GGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAG...CCTTTTGAACCACAGAGGGTGGTTTAGGTTGAGCCCTCTGGCTCTGGTGCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGCTGGCCTCGAACTCAGGAATCAAGCCTGCCTCTGCCTCCCGAGTGCTGACGAAACAGAATTTCTaGCGCTGCCACAGGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: TRLASNSGIKPASASRVLTKQNF*RCHRWG Trigger: ACCCCACCTGTGGCAGCGTCAGAAATTCTGTTTCGT...CAGCACTCGGGAGGCAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGCTGGCCTCGAACTCAGGAATCAAGCCTGCCTCTGCCTCCCGAGTGCTGTGTCCTCCTCTAGGCTaGCGGTGCCCTCTACAAATT | + |
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Preference number: 2 (lower is better) Translates to: TRLASNSGIKPASASRVLCPPLG*RCPLQI Trigger: AATTTGTAGAGGGCACCGGCAGCCTAGAGGAGGACA...CAGCACTCGGGAGGCAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCACCAACCTTTATCTGTGCTGAGTCAGGGCTCAGCCCTTGAGCAGGTTACCCTGCTCTGCGATGGCTaGGCAGCTCCCAGTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LHQPLSVLSQGSALEQVTLLCDG*AAPSQQ Trigger: CTGCTGACTGGGAGCTGCTCAGCCATCGCAGAGCAG...GGTAACCTGCTCAAGGGCTGAGCCCTGACTCAGCACAGATAAAGGTTGGTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR TCA 90 bp | TTTACAGAGTCAAGGGAGCAAGTAGATTCCTCCCCAGGGCCACGAGCAGCCCCATCAGGGCTCAGCCCTTaGGCAGGTTACCTCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: FTESREQVDSSPGPRAAPSGLSP*AGYLRS Trigger: GCTTCTGAGGTAACCTGCTCAAGGGCTGAGCCCTGA...TGGGGCTGCTCGTGGCCCTGGGGAGGAATCTACTTGCTCCCTTGACTCTGTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | GCGCCTCTGCCAAGCCTGATGATCTCTGGAACCCACACAGAGGAGAGCCCCGACCTCTGTAAACCAGGCTaGCCTCGAACTCAGGAATCA | + |
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Preference number: 2 (lower is better) Translates to: APLPSLMISGTHTEESPDLCKPG*PRTQES Trigger: TGATTCCTGAGTTCGAGGCCAGCCTGGTTTACAGAG...GTCGGGGCTCTCCTCTGTGTGGGTTCCAGAGATCATCAGGCTTGGCAGAGGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR TCA 90 bp | GCGCCTCTGCCAAGCCTGATGATCTCTGGAACCCACACAGAGGAGAGCCCCGACTTCCTTCCTAAGGGCTaGGCAGCTTCCTTCCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: APLPSLMISGTHTEESPDFLPKG*AASFLF Trigger: AAAAAGGAAGGAAGCTGCTCAGCCCTTAGGAAGGAA...GTCGGGGCTCTCCTCTGTGTGGGTTCCAGAGATCATCAGGCTTGGCAGAGGCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR GCA 90 bp | GGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAAGCACTCGCTCAGGAATCAAGCCTaGCTCTGCCTCCCGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GASPQQHPGNPKLHSKHSLRNQA*LCLPSA Trigger: AGCACTCGGGAGGCAGAGGCAGGCTTGATTCCTGAG...CGAGTGCTTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR GCA 90 bp | CTTCACCAACCTTTATCTGTGCTGAGTCAGGGCTCAGCCCTTGAGCAGGTTACCCCAACCTTCTCCACCTaGTCCCGGCACTGTGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LHQPLSVLSQGSALEQVTPTFST*SRHCVS Trigger: GCTCACACAGTGCCGGGAGCAGGTGGAGAAGGTTGG...GGTAACCTGCTCAAGGGCTGAGCCCTGACTCAGCACAGATAAAGGTTGGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGTCAAGGGAGCAAGTAGATTCCTCCCCAGGGCCACGAGCAGCCCCAACGAAGTCAAAGGACACCTaGCCCAGCTTCTCACTCATC | + |
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Preference number: 2 (lower is better) Translates to: TESREQVDSSPGPRAAPTKSKDT*PSFSLI Trigger: GATGAGTGAGAAGCTGGGCCAGGTGTCCTTTGACTT...CGTTGGGGCTGCTCGTGGCCCTGGGGAGGAATCTACTTGCTCCCTTGACTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR CAA 90 bp | CTGGGCAGTAGCCTCACTGTATGGCTTCTCCACCATGGTTTCGCCTaGTCTGGGGAAGTCAAAGGACACCTGGCCCAGCTTCTCACTCAT | + |
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Preference number: 2 (lower is better) Translates to: LGSSLTVWLLHHGFA*SGEVKGHLAQLLTH Trigger: ATGAGTGAGAAGCTGGGCCAGGTGTCCTTTGACTTCCCCAGACAAGGCGAAACCATGGTGGAGAAGCCATACAGTGAGGCTACTGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGAGCTAGAAGCCAGGTCTaGCTGACGAAACAGAATTTC | + |
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Preference number: 2 (lower is better) Translates to: KLHSKHSALTEQASTQPRARSQV*LTKQNF Trigger: GAAATTCTGTTTCGTCAGTCAGACCTGGCTTCTAGC...TCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR GCA 90 bp | CCATGCACCAGAGCCAGAGGGCTCAACCTAAACCACCCTCTGTGGTTCAAAAGGATAGGTGGACTTCTCTaGAAAGGGCCGAGGGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PCTRARGLNLNHPLWFKRIGGLL*KGPRAQ Trigger: TTGGGCCCTCGGCCCTTTGCAGAGAAGTCCACCTAT...CCTTTTGAACCACAGAGGGTGGTTTAGGTTGAGCCCTCTGGCTCTGGTGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAAGCACTCGCATCTACTGGTGCGCTaGCTTTCCTTCCTAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GASPQQHPGNPKLHSKHSHLLVR*LSFLRA Trigger: AGCCCTTAGGAAGGAAAGCCAGCGCACCAGTAGATG...CGAGTGCTTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR TCA 90 bp | ACGGAATTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGACTGCTCTGCGATGGCTaGGCAGCTCCCAGTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TELNLTLPSVRQRNPKARLLCDG*AAPSQQ Trigger: CTGCTGACTGGGAGCTGCTCAGCCATCGCAGAGCAG...TCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAATTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR TCA 90 bp | TGCACCAGAGCCAGAGGGCTCAACCTAAACCACCCTCTGTGGTTCAAAAGGGGGGCTAGAAGCCAGGTCTaGCTGACGAAACAGAATTTC | + |
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Preference number: 2 (lower is better) Translates to: CTRARGLNLNHPLWFKRGARSQV*LTKQNF Trigger: GAAATTCTGTTTCGTCAGTCAGACCTGGCTTCTAGC...CCCCCTTTTGAACCACAGAGGGTGGTTTAGGTTGAGCCCTCTGGCTCTGGTGCA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR GCA 90 bp | GGCTTGCTGACCTGCAAACACAGCCAGACTCAATACGAGACTCCATCTAAAAAGGAAAGAGAGGCCTCTTaGAGCCCACGGAGGCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: GLLTCKHSQTQYETPSKKEREAS*SPRRLG Trigger: GCCAAGCCTCCGTGGGCTGCAAGAGGCCTCTCTTTC...CTTTTTAGATGGAGTCTCGTATTGAGTCTGGCTGTGTTTGCAGGTCAGCAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTGCCCTGAACTCACTCTGTAAACCAGGCTGGCCTCGAACTCAGGAATCATCACAGCCCCACACCTaGAATCCCTCCAAAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: LAALNSLCKPGWPRTQESSQPHT*NPSKKT Trigger: TGTCTTTTTGGAGGGATTCCAGGTGTGGGGCTGTGA...TGATTCCTGAGTTCGAGGCCAGCCTGGTTTACAGAGTGAGTTCAGGGCAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | AACTCACTCTGTAAACCAGGCTGGCCTCGAACTCAGGAATCAAGCCTGCCTCTGATGGCTTCTCCACCATaGTTTCGCCTTGTCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: NSLCKPGWPRTQESSLPLMASPP*FRLVWG Trigger: TCCCCAGACAAGGCGAAACCATGGTGGAGAAGCCAT...CAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTGGTTTACAGAGTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | ATACACCCAGTCCACCCAATCTGGCCCTTAGCCGGGCCCCAAAGAGAAGGACAGTCTTCATCAATGAGCTaGGCAGTAGCCTCACTGTAT | + |
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Preference number: 2 (lower is better) Translates to: IHPVHPIWPLAGPQREGQSSSMS*AVASLY Trigger: ATACAGTGAGGCTACTGCCCAGCTCATTGATGAAGA...CTGTCCTTCTCTTTGGGGCCCGGCTAAGGGCCAGATTGGGTGGACTGGGTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGATCTGTGAATTTTGCATaGTCTTATCTGAGACGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KLHSKHSALTEQASTQPRSVNFA*SYLRRV Trigger: CACACGTCTCAGATAAGACCATGCAAAATTCACAGA...TCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR GCA 90 bp | AAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGACTTTTCTGTGAATTTTaGATGGTCTTATCTGAGACG | + |
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Preference number: 2 (lower is better) Translates to: KLHSKHSALTEQASTQPRLFCEF*MVLSET Trigger: CGTCTCAGATAAGACCATGCAAAATTCACAGAAAAG...TCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | GAAACCTGGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAAAAGCCTGATGATCTCTaGAACCCACACAGAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ETWSKSTTTSREPKAPLQKPDDL*NPHRGE Trigger: CTCTCCTCTGTGTGGGTTCCAGAGATCATCAGGCTT...TTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCCAGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR-3UTR TCA 90 bp | ACGGAATTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGAGCTCCGGTGGTGATCTaGCCAAAGAACAGCTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TELNLTLPSVRQRNPKARAPVVI*PKNSCS Trigger: TGAGCAGCTGTTCTTTGGTCAGATCACCACCGGAGC...TCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAATTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| 3UTR-3UTR CCA 90 bp | TGGTCGCAGGCCACACCTTTGTTCCCTCAGCTATCTCCTTGGCTGGATGCTGGATCTGTGAATTTTGCATaGTCTTATCTGAGACGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: WSQATPLFPQLSPWLDAGSVNFA*SYLRRV Trigger: CACACGTCTCAGATAAGACCATGCAAAATTCACAGA...TCCAGCATCCAGCCAAGGAGATAGCTGAGGGAACAAAGGTGTGGCCTGCGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR-3UTR CCA 90 bp | TTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGAAGCCAGTCACAGCCCCACACCTaGAATCCCTCCAAAAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LNLTLPSVRQRNPKARSQSQPHT*NPSKKT Trigger: TGTCTTTTTGGAGGGATTCCAGGTGTGGGGCTGTGA...CTGGCTTCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTTACCTCAGAAGCAGCTGTAAGAGGCTCACTTGGAAACTTAATCAAACACCATCTACTGGTGCGCTaGCTTTCCTTCCTAAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: QVTSEAAVRGSLGNLIKHHLLVR*LSFLRA Trigger: AGCCCTTAGGAAGGAAAGCCAGCGCACCAGTAGATG...GTGTTTGATTAAGTTTCCAAGTGAGCCTCTTACAGCTGCTTCTGAGGTAACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAAGCACTCGGTGTGCAGATGTAAGTaGAAAACAGTAGAGATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GASPQQHPGNPKLHSKHSVCRCK*KTVEIE Trigger: TTCTATCTCTACTGTTTTCCACTTACATCTGCACAC...CGAGTGCTTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR-3UTR GCA 90 bp | TTACAAACAGTGAAAATTGAAAGTATCTGTCTCCTGATGACATCTCTGAGGCGACTTTTCTGTGAATTTTaGATGGTCTTATCTGAGACG | + |
|
Preference number: 2 (lower is better) Translates to: LQTVKIESICLLMTSLRRLFCEF*MVLSET Trigger: CGTCTCAGATAAGACCATGCAAAATTCACAGAAAAG...TCGCCTCAGAGATGTCATCAGGAGACAGATACTTTCAATTTTCACTGTTTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR GCA 72 bp | CTCCCCAGGGCCACGAGCAGCCCCAACGCAGGCTATTaGAGCGGATGGTGCAGCCCTGAGATCTGTGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPRATSSPNAGY*SGWCSPEICVP Trigger: GGGGACACAGATCTCAGGGCTGCACCATCCGCTGCAATAGCCTGCGTTGGGGCTGCTCGTGGCCCTGGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR CCA 72 bp | CAGCTCCCAGTCAGCAGTGGTCATAAGCCGCCCCGGTaGCCACAGGCTACACAGGGCTCTCCTGCAAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QLPVSSGHKPPR*PQATQGSPASP Trigger: GGGGCTTGCAGGAGAGCCCTGTGTAGCCTGTGGCCACCGGGGCGGCTTATGACCACTGCTGACTGGGAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| 3UTR-3UTR CAA 90 bp | CATCGTTCACGGAACGGCCAGGATAAAGGTGAGCCTGCAATCCCAGCACTGGGCCCCCGACTCCAGAGGTaGTCCTGTGCCCTGCGCATG | + |
|
Preference number: 3 (lower is better) Translates to: HRSRNGQDKGEPAIPALGPRLQR*SCALRM Trigger: CATGCGCAGGGCACAGGACAACCTCTGGAGTCGGGG...GCCCAGTGCTGGGATTGCAGGCTCACCTTTATCCTGGCCGTTCCGTGAACGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR CCA 72 bp | ACAGGAAAGAGAGGCCTCTTGCAGCCCACGGAGGCTTaGCGTTCCAAAGCCCTCCCCATGCACCAGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TGKRGLLQPTEA*RSKALPMHQSQ Trigger: CTGGCTCTGGTGCATGGGGAGGGCTTTGGAACGCCAAGCCTCCGTGGGCTGCAAGAGGCCTCTCTTTCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR TCA 72 bp | TGGGCAGGCAGAGACGGGAGGATCCCTGGGGCTTGCTaGCCTGCAAACACAGCCAGACTCAATACGAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: WAGRDGRIPGAC*PANTARLNTRL Trigger: GAGTCTCGTATTGAGTCTGGCTGTGTTTGCAGGTCAGCAAGCCCCAGGGATCCTCCCGTCTCTGCCTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR GCA 72 bp | CAGGCTGGCCTCGAACTCAGGAATCAAGCCTGCCTCTaGCTCCCGAGTGCTGGGATTAAAGGCATGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QAGLELRNQACL*LPSAGIKGMLC Trigger: GCAGAGCATGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR CCA 72 bp | GCCCTGGCTGCCCTGAACTCACTCTGTAAACCAGGCTaGCCTCGAACTCAGGAATCAAGCCTGCCTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ALAALNSLCKPG*PRTQESSLPLP Trigger: AGGCAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTGGTTTACAGAGTGAGTTCAGGGCAGCCAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR CCA 72 bp | CGGTCCCTGTCCTCCACTGCACATCTACTGGTGCGCTaGCTTTCCTTCCTAAGGGCTGAGCAGCTTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RSLSSTAHLLVR*LSFLRAEQLPS Trigger: GGAAGGAAGCTGCTCAGCCCTTAGGAAGGAAAGCCAGCGCACCAGTAGATGTGCAGTGGAGGACAGGGACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR GCA 72 bp | GTAAACCAGGCTGGCCTCGAACTCAGGAATCAAGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: VNQAGLELRNQA*LCLPSAGIKGM Trigger: CATGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTGGTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR GCA 72 bp | AGGCAGAGACGGGAGGATCCCTGGGGCTTGCTGACCTaGAAACACAGCCAGACTCAATACGAGACTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: RQRREDPWGLLT*KHSQTQYETPS Trigger: AGATGGAGTCTCGTATTGAGTCTGGCTGTGTTTGCAGGTCAGCAAGCCCCAGGGATCCTCCCGTCTCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR GCA 72 bp | TCAGCCCCTCAGGAAGGGATGTGTCCTCCTCTAGGCTaGCGGTGCCCTCTACAAATTCCTCATAGGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: SAPQEGMCPPLG*RCPLQIPHRWT Trigger: AGTCCACCTATGAGGAATTTGTAGAGGGCACCGGCAGCCTAGAGGAGGACACATCCCTTCCTGAGGGGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| 3UTR CCA 72 bp | GACCTGACGAGGCACCGGACCTCTTCATCAATGAGCTaGGCAGTAGCCTCACTGTATGGCTTCTCCACCATG | + |
|
Preference number: 3 (lower is better) Translates to: DLTRHRTSSSMS*AVASLYGFSTM Trigger: CATGGTGGAGAAGCCATACAGTGAGGCTACTGCCCAGCTCATTGATGAAGAGGTCCGGTGCCTCGTCAGGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| 3UTR GCA 72 bp | CCTCAGGAAGGGATGTGTCCTCCTCTAGGCTGCCGGTaGCCTCTACAAATTCCTCATAGGTGGACTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PQEGMCPPLGCR*PLQIPHRWTSL Trigger: CAGAGAAGTCCACCTATGAGGAATTTGTAGAGGGCACCGGCAGCCTAGAGGAGGACACATCCCTTCCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCACAGCCCCACACCTGGAATCCCTCCAAAAAGACATCACTCAGGCTTCACAGTCGCAGGCCACACCTTaGTTCCCTCAGCTATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LTAPHLESLQKDITQASQSQATP*FPQLSP Trigger: AGGAGATAGCTGAGGGAACAAAGGTGTGGCCTGCGA...CTGTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGTGGGGCTGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR GCA 72 bp | GGTGCCCTCTACAAATTCCTCATAGGTGGACTTCTCTaGAAAGGGCCGAGGGCCCAAGAGCTCTATCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: GALYKFLIGGLL*KGPRAQELYHV Trigger: GACATGATAGAGCTCTTGGGCCCTCGGCCCTTTGCAGAGAAGTCCACCTATGAGGAATTTGTAGAGGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTGCTGACCTGCAAACACAGCCAGACTCAATACGAGACTCCATCTAAAAAGTCGCAGGCCACACCTTaGTTCCCTCAGCTATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GLLTCKHSQTQYETPSKKSQATP*FPQLSP Trigger: AGGAGATAGCTGAGGGAACAAAGGTGTGGCCTGCGA...CTTTTTAGATGGAGTCTCGTATTGAGTCTGGCTGTGTTTGCAGGTCAGCAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR CCA 72 bp | ATTAGTCTTTCAGTTACTCTGACAGCTGCTCTGCGATaGCTGAGCAGCTCCCAGTCAGCAGTGGTCATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ISLSVTLTAALR*LSSSQSAVVIS Trigger: GCTTATGACCACTGCTGACTGGGAGCTGCTCAGCCATCGCAGAGCAGCTGTCAGAGTAACTGAAAGACTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR TCA 72 bp | AGTATCTGTCTCCTGATGACATCTCTGAGGCGAGCGTaGCAGTTTAGAGAATGTGCGATACCATGCACACCC | + |
|
Preference number: 3 (lower is better) Translates to: SICLLMTSLRRA*QFRECAIPCTP Trigger: GGGTGTGCATGGTATCGCACATTCTCTAAACTGTCACGCTCGCCTCAGAGATGTCATCAGGAGACAGATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR CCA 72 bp | AGGCCACACCTTTGTTCCCTCAGCTATCTCCTTGGCTaGATGCTGGAGTCTAGCAGCTTTTCTGTGAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: RPHLCSLSYLLG*MLESSSFSVNF Trigger: AAAATTCACAGAAAAGCTGCTAGACTCCAGCATCCAGCCAAGGAGATAGCTGAGGGAACAAAGGTGTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR CCA 72 bp | AATCAAACACAATGTAGCTCCTCACAGCCCCACACCTaGAATCCCTCCAAAAAGACATCACTCAGGCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: NQTQCSSSQPHT*NPSKKTSLRLH Trigger: GTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGTGGGGCTGTGAGGAGCTACATTGTGTTTGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| 3UTR TCA 72 bp | TGTTTTCTTTACTTCTTCACCAACCTTTATCTGTGCTaGGTCAGGGCTCAGCCCTTGAGCAGGTTACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CFLYFFTNLYLC*VRAQPLSRLPQ Trigger: CTGAGGTAACCTGCTCAAGGGCTGAGCCCTGACTCAGCACAGATAAAGGTTGGTGAAGAAGTAAAGAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR CCA 90 bp | GACAGGCCTCCACCATCCTGGCCAGGCACCCGGGAAGCTATGGCATCAGCTGAACTCTGGCCTCCCAGGTaGCCACGGCCTCGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRPPPSWPGTREAMASAELWPPR*PRPRFL Trigger: CAGAAAGCGAGGCCGTGGCCACCTGGGAGGCCAGAG...TTCAGCTGATGCCATAGCTTCCCGGGTGCCTGGCCAGGATGGTGGAGGCCTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| 3UTR CAA 72 bp | TGGAACCCACACAGAGGAGAGCCCCGACTCCAGAGGTaGTCCTGTGCCCTGCGCATGTGCACCGTGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: WNPHRGEPRLQR*SCALRMCTVVR Trigger: ACGCACCACGGTGCACATGCGCAGGGCACAGGACAACCTCTGGAGTCGGGGCTCTCCTCTGTGTGGGTTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR TCA 90 bp | TTCACAGAACCTGGAGAACCGGCCAGCCTTAGGTCCAGGGCCTATGGTCGCAGGGCTCCCGGCACTGTGTaGGCAGCTCCAGGGTCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTEPGEPASLRSRAYGRRAPGTV*AAPGSD Trigger: ATCGGACCCTGGAGCTGCTCACACAGTGCCGGGAGC...CCTGCGACCATAGGCCCTGGACCTAAGGCTGGCCGGTTCTCCAGGTTCTGTGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGACTCTGGCCTCCCAGGTaGCCACGGCCTCGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLHSKHSALTEQASTQPRLWPPR*PRPRFL Trigger: CAGAAAGCGAGGCCGTGGCCACCTGGGAGGCCAGAG...TCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR CCA 90 bp | AGCTGCTCTGCGATGGCTGAGCAGCTCCCAGTCAGCAGTGGTCATAAGCCGCCCTTTTCCTGCTCACTCTaGCCTCCCAGGTGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SCSAMAEQLPVSSGHKPPFSCSL*PPRWPR Trigger: CCGTGGCCACCTGGGAGGCCAGAGTGAGCAGGAAAA...GGGCGGCTTATGACCACTGCTGACTGGGAGCTGCTCAGCCATCGCAGAGCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | ACACCCAGTCCACCCAATCTGGCCCTTAGCCGGGCCCCAAAGAGAAGGACAGGCTTTTCCTGCTCACTCTaGCCTCCCAGGTGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TPSPPNLALSRAPKRRTGFSCSL*PPRWPR Trigger: CCGTGGCCACCTGGGAGGCCAGAGTGAGCAGGAAAA...GCCTGTCCTTCTCTTTGGGGCCCGGCTAAGGGCCAGATTGGGTGGACTGGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR TCA 90 bp | AGCTGCTCTGCGATGGCTGAGCAGCTCCCAGTCAGCAGTGGTCATAAGCCGCCCGAGCATCTCCCCAGATaGCCCTGCAGAGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCSAMAEQLPVSSGHKPPEHLPR*PCRAMP Trigger: TGGCATTGCTCTGCAGGGTCATCTGGGGAGATGCTC...GGGCGGCTTATGACCACTGCTGACTGGGAGCTGCTCAGCCATCGCAGAGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR TCA 90 bp | GCGCCTCTGCCAAGCCTGATGATCTCTGGAACCCACACAGAGGAGAGCCCCGACTTGTCTCACCAACACTaGAGAGGCCTCCTCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: APLPSLMISGTHTEESPDLSHQH*RGLLLA Trigger: GGCGAGGAGGAGGCCTCTTCAGTGTTGGTGAGACAA...GTCGGGGCTCTCCTCTGTGTGGGTTCCAGAGATCATCAGGCTTGGCAGAGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | AAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGAGGTTGGTGGGCTCAATaGCCAGCTCCCACTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLHSKHSALTEQASTQPRGWWAQ*PAPTEQ Trigger: CTGCTCAGTGGGAGCTGGGCATTGAGCCCACCAACC...TCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | CATCGTTCACGGAACGGCCAGGATAAAGGTGAGCCTGCAATCCCAGCACTGGGCCCACCGCAGCCTGGTTaGTGGGCTCAATGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRSRNGQDKGEPAIPALGPPQPG*WAQCPA Trigger: AGCTGGGCATTGAGCCCACCAACCAGGCTGCGGTGG...GCCCAGTGCTGGGATTGCAGGCTCACCTTTATCCTGGCCGTTCCGTGAACGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR TCA 90 bp | ACAGAGTCAAGGGAGCAAGTAGATTCCTCCCCAGGGCCACGAGCAGCCCCAACGGAGCATCTCCCCAGATaGCCCTGCAGAGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TESREQVDSSPGPRAAPTEHLPR*PCRAMP Trigger: TGGCATTGCTCTGCAGGGTCATCTGGGGAGATGCTC...CGTTGGGGCTGCTCGTGGCCCTGGGGAGGAATCTACTTGCTCCCTTGACTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR TCA 90 bp | ACACCCAGTCCACCCAATCTGGCCCTTAGCCGGGCCCCAAAGAGAAGGACAGGCGATGGACACCTCCAATaGCCCTCTCGATGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSPPNLALSRAPKRRTGDGHLQ*PSRWLA Trigger: AGCAAGCCATCGAGAGGGTCATTGGAGGTGTCCATC...GCCTGTCCTTCTCTTTGGGGCCCGGCTAAGGGCCAGATTGGGTGGACTGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | GCGCCTCTGCCAAGCCTGATGATCTCTGGAACCCACACAGAGGAGAGCCCCGACGCGACCAGTCCCCATTaGACCCCTCCTCATAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: APLPSLMISGTHTEESPDATSPH*TPPHSI Trigger: TATGCTATGAGGAGGGGTCCAATGGGGACTGGTCGC...GTCGGGGCTCTCCTCTGTGTGGGTTCCAGAGATCATCAGGCTTGGCAGAGGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGCCCTGAACTCACTCTGTAAACCAGGCTGGCCTCGAACTCAGGAATCACCTGGACAGAAGGGCTaGGGTGGCGGGCAGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LAALNSLCKPGWPRTQESPGQKG*GGGQQS Trigger: TGATTGCTGCCCGCCACCTCAGCCCTTCTGTCCAGG...TGATTCCTGAGTTCGAGGCCAGCCTGGTTTACAGAGTGAGTTCAGGGCAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | AGAATTTCTGACGCTGCCACAGGTGGGGTGGCCACGGTCCCTGTCCTCCACTGCGTGTTTTCGGGCCATTaGAAACATGTCACGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: RISDAATGGVATVPVLHCVFSGH*KHVTDP Trigger: CGGGTCCGTGACATGTTTGCAATGGCCCGAAAACAC...GCAGTGGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAGCGTCAGAAATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGAGGTCCACCAGACCTCTaGCCAGGTAATACTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: KLHSKHSALTEQASTQPRGPPDL*PGNTAR Trigger: TCGTGCAGTATTACCTGGCCAGAGGTCTGGTGGACC...TCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | AGAATTTCTGACGCTGCCACAGGTGGGGTGGCCACGGTCCCTGTCCTCCACTGCATGGCTTCTCCACCATaGTTTCGCCTTGTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RISDAATGGVATVPVLHCMASPP*FRLVWG Trigger: TCCCCAGACAAGGCGAAACCATGGTGGAGAAGCCAT...GCAGTGGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAGCGTCAGAAATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR TCA 90 bp | ACACCCAGTCCACCCAATCTGGCCCTTAGCCGGGCCCCAAAGAGAAGGACAGGCCGAAGTGTTTCCAGGTaGTCTCTTTTCCGGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPSPPNLALSRAPKRRTGRSVSR*SLFRDL Trigger: GAGATCCCGGAAAAGAGATCACCTGGAAACACTTCG...GCCTGTCCTTCTCTTTGGGGCCCGGCTAAGGGCCAGATTGGGTGGACTGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | CCATGCACCAGAGCCAGAGGGCTCAACCTAAACCACCCTCTGTGGTTCAAAAGGGAACCAGCCCACCACTaGATGCCCAGCCTCGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PCTRARGLNLNHPLWFKREPAHH*MPSLVV Trigger: TACCACGAGGCTGGGCATGCAGTGGTGGGCTGGTTC...CCTTTTGAACCACAGAGGGTGGTTTAGGTTGAGCCCTCTGGCTCTGGTGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR GCA 90 bp | AAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGATGTCCTCCTCTAGGCTaGCGGTGCCCTCTACAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KLHSKHSALTEQASTQPRCPPLG*RCPLQI Trigger: AATTTGTAGAGGGCACCGGCAGCCTAGAGGAGGACA...TCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGAAGCACCAGTGAAGCCTaGAGTAAGAGCTGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KLHSKHSALTEQASTQPRSTSEA*SKSCQL Trigger: AAGCTGGCAGCTCTTACTCCAGGCTTCACTGGTGCT...TCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | ACACCCAGTCCACCCAATCTGGCCCTTAGCCGGGCCCCAAAGAGAAGGACAGGCAAGTCAAAGGACACCTaGCCCAGCTTCTCACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TPSPPNLALSRAPKRRTGKSKDT*PSFSLI Trigger: GATGAGTGAGAAGCTGGGCCAGGTGTCCTTTGACTT...GCCTGTCCTTCTCTTTGGGGCCCGGCTAAGGGCCAGATTGGGTGGACTGGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR TCA 90 bp | AGCCCCTCAGGAAGGGATGTGTCCTCCTCTAGGCTGCCGGTGCCCTCTACAAATCCCTCTGGGAGGTTTTaGATACAGCCTCGGGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSGRDVSSSRLPVPSTNPSGRF*IQPRGK Trigger: TTTTCCCCGAGGCTGTATTCAAAACCTCCCAGAGGG...ATTTGTAGAGGGCACCGGCAGCCTAGAGGAGGACACATCCCTTCCTGAGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| CDS-3UTR TCA 90 bp | TGCACCAGAGCCAGAGGGCTCAACCTAAACCACCCTCTGTGGTTCAAAAGGGGGGCTCCGGTGGTGATCTaGCCAAAGAACAGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CTRARGLNLNHPLWFKRGAPVVI*PKNSCS Trigger: TGAGCAGCTGTTCTTTGGTCAGATCACCACCGGAGC...CCCCCTTTTGAACCACAGAGGGTGGTTTAGGTTGAGCCCTCTGGCTCTGGTGCA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR GCA 90 bp | TTCACAGAACCTGGAGAACCGGCCAGCCTTAGGTCCAGGGCCTATGGTCGCAGGACAGCCAGCCACATCTaGAAACCGCACATCGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTEPGEPASLRSRAYGRRTASHI*KPHIDV Trigger: AACATCGATGTGCGGTTTGCAGATGTGGCTGGCTGT...CCTGCGACCATAGGCCCTGGACCTAAGGCTGGCCGGTTCTCCAGGTTCTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | GGAGGCTTGGCGTTCCAAAGCCCTCCCCATGCACCAGAGCCAGAGGGCTCAACCCCCAGCAGTTGCTTTTaGAAGAAGTGTTTTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGLAFQSPPHAPEPEGSTPSSCF*KKCFAS Trigger: ACTGGCAAAACACTTCTTGCAAAAGCAACTGCTGGG...GGTTGAGCCCTCTGGCTCTGGTGCATGGGGAGGGCTTTGGAACGCCAAGCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | AGAATTTCTGACGCTGCCACAGGTGGGGTGGCCACGGTCCCTGTCCTCCACTGCGGCCTCCCCAGCAGTTaGTTTTGCAAGAAGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RISDAATGGVATVPVLHCGLPSS*FCKKCF Trigger: AAAACACTTCTTGCAAAAGCAACTGCTGGGGAGGCC...GCAGTGGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAGCGTCAGAAATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGATTAACAGGGTGTTTTCGGGCCATTaGAAACATGTCACGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LQALGSHRAGLDTAQINRVFSGH*KHVTDP Trigger: CGGGTCCGTGACATGTTTGCAATGGCCCGAAAACAC...CCTGTTAATCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | ACACCCAGTCCACCCAATCTGGCCCTTAGCCGGGCCCCAAAGAGAAGGACAGGCCACGGCCTCGCTTTCTaGCAATTGCATCAATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TPSPPNLALSRAPKRRTGHGLAF*QLHQSH Trigger: ATGAGATTGATGCAATTGGCAGAAAGCGAGGCCGTG...GCCTGTCCTTCTCTTTGGGGCCCGGCTAAGGGCCAGATTGGGTGGACTGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | AACTCACTCTGTAAACCAGGCTGGCCTCGAACTCAGGAATCAAGCCTGCCTCTGCCAACCTTCTCCACCTaGTCCCGGCACTGTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSLCKPGWPRTQESSLPLPTFST*SRHCVS Trigger: GCTCACACAGTGCCGGGAGCAGGTGGAGAAGGTTGG...CAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTGGTTTACAGAGTGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR CCA 90 bp | TGGTCGCAGGCCACACCTTTGTTCCCTCAGCTATCTCCTTGGCTGGATGCTGGAGTCACGGACCCGTGCTaGCCCAACACCAACAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: WSQATPLFPQLSPWLDAGVTDPC*PNTNKH Trigger: ATGTTTGTTGGTGTTGGGCCAGCACGGGTCCGTGAC...TCCAGCATCCAGCCAAGGAGATAGCTGAGGGAACAAAGGTGTGGCCTGCGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | TCCACTGCACATCTACTGGTGCGCTGGCTTTCCTTCCTAAGGGCTGAGCAGCTTTCAAAGTGCCGCTCCTaGACAGAAGGGCTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: STAHLLVRWLSFLRAEQLSKCRS*TEGLRW Trigger: CCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGA...AAGCTGCTCAGCCCTTAGGAAGGAAAGCCAGCGCACCAGTAGATGTGCAGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR TCA 90 bp | AGAATTTCTGACGCTGCCACAGGTGGGGTGGCCACGGTCCCTGTCCTCCACTGCTTGGCTCCTAAGTCCTaGTATTGCTTTGGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RISDAATGGVATVPVLHCLAPKS*YCFGFF Trigger: GAAGAACCCAAAGCAATATCAGGACTTAGGAGCCAA...GCAGTGGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAGCGTCAGAAATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | GAAACCTGGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAAGGTTGGTGGGCTCAATaGCCAGCTCCCACTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETWSKSTTTSREPKAPLQGWWAQ*PAPTEQ Trigger: CTGCTCAGTGGGAGCTGGGCATTGAGCCCACCAACC...TTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCCAGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | TTCACAGAACCTGGAGAACCGGCCAGCCTTAGGTCCAGGGCCTATGGTCGCAGGTTGCAAGAAGTGTTTTaGCAGTACCAGGTGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTEPGEPASLRSRAYGRRLQEVF*QYQVDQ Trigger: CTGGTCCACCTGGTACTGGCAAAACACTTCTTGCAA...CCTGCGACCATAGGCCCTGGACCTAAGGCTGGCCGGTTCTCCAGGTTCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGGCTGGCCTCGAACTCAGGAATCAAGCCTGCCTCTGCCTCCCGAGTGCTGGGCAGCAATCAGTGCTaGTTCATTGCAAACATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRLASNSGIKPASASRVLGSNQC*FIANIG Trigger: TCCAATGTTTGCAATGAAGCAGCACTGATTGCTGCC...CAGCACTCGGGAGGCAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | AACAGAATTTCTGACGCTGCCACAGGTGGGGTGGCCACGGTCCCTGTCCTCCACGCGGGCAGCAATCAGTaGTGCTTCATTGCAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: NRISDAATGGVATVPVLHAGSNQ*CFIANI Trigger: AATGTTTGCAATGAAGCAGCACTGATTGCTGCCCGC...GTGGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAGCGTCAGAAATTCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGCCCTGAACTCACTCTGTAAACCAGGCTGGCCTCGAACTCAGGAATCAATGGCTTGCTCAAAGTaGCGCTCCTGGACAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAALNSLCKPGWPRTQESMACSK*RSWTEG Trigger: CCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCAT...TGATTCCTGAGTTCGAGGCCAGCCTGGTTTACAGAGTGAGTTCAGGGCAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | AGAATTTCTGACGCTGCCACAGGTGGGGTGGCCACGGTCCCTGTCCTCCACTGCACTTCTCAAACCCTCTaGGAGGTTTTGAATACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RISDAATGGVATVPVLHCTSQTL*EVLNTA Trigger: GGCTGTATTCAAAACCTCCCAGAGGGTTTGAGAAGT...GCAGTGGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAGCGTCAGAAATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | GCCCTCTACAAATTCCTCATAGGTGGACTTCTCTGCAAAGGGCCGAGGGCCCAATTTGCCAGTACCAGGTaGACCAGTGAGCATCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALYKFLIGGLLCKGPRAQFASTR*TSEHRS Trigger: GGAGCGATGCTCACTGGTCCACCTGGTACTGGCAAA...TTGGGCCCTCGGCCCTTTGCAGAGAAGTCCACCTATGAGGAATTTGTAGAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| 3UTR CAA 72 bp | AGCCTCACTGTATGGCTTCTCCACCATGGTTTCGCCTaGTCTGGGGAAGTCAAAGGACACCTGGCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLTVWLLHHGFA*SGEVKGHLAQL Trigger: AAGCTGGGCCAGGTGTCCTTTGACTTCCCCAGACAAGGCGAAACCATGGTGGAGAAGCCATACAGTGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | CAGCCCCACACCTGGAATCCCTCCAAAAAGACATCACTCAGGCTTCACAGAACCGAAGTCAGTTTTCCCTaGAGAGCCAGCTGCTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPHTWNPSKKTSLRLHRTEVSFP*RASCCE Trigger: CTCGCAGCAGCTGGCTCTGCAGGGAAAACTGACTTC...GGTTCTGTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGTGGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR GCA 90 bp | CAGCCCCACACCTGGAATCCCTCCAAAAAGACATCACTCAGGCTTCACAGAACCATAGGTGGACTTCTCTaGAAAGGGCCGAGGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPHTWNPSKKTSLRLHRTIGGLL*KGPRAQ Trigger: TTGGGCCCTCGGCCCTTTGCAGAGAAGTCCACCTAT...GGTTCTGTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGTGGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR CCA 90 bp | CTTCACCAACCTTTATCTGTGCTGAGTCAGGGCTCAGCCCTTGAGCAGGTTACCGTCACGGACCCGTGCTaGCCCAACACCAACAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LHQPLSVLSQGSALEQVTVTDPC*PNTNKH Trigger: ATGTTTGTTGGTGTTGGGCCAGCACGGGTCCGTGAC...GGTAACCTGCTCAAGGGCTGAGCCCTGACTCAGCACAGATAAAGGTTGGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR TCA 90 bp | ACGGAATTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGACCTGGACAGAAGGGCTaGGGTGGCGGGCAGCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TELNLTLPSVRQRNPKARPGQKG*GGGQQS Trigger: TGATTGCTGCCCGCCACCTCAGCCCTTCTGTCCAGG...TCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAATTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | GAAACCTGGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAAGAAGTCAGTTTTCCCTaGAGAGCCAGCTGCTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ETWSKSTTTSREPKAPLQEVSFP*RASCCE Trigger: CTCGCAGCAGCTGGCTCTGCAGGGAAAACTGACTTC...TTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCCAGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | ACACCTGGAATCCCTCCAAAAAGACATCACTCAGGCTTCACAGAACCTGGAGAACACATCGCCACAGCTTaGAGAAAGGCCAGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPGIPPKRHHSGFTEPGEHIATA*RKARPG Trigger: CCCTGGCCTGGCCTTTCTCCAAGCTGTGGCGATGTG...TTCTCCAGGTTCTGTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | ACGGAATTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGACCACCGCAGCCTGGTTaGTGGGCTCAATGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TELNLTLPSVRQRNPKARPPQPG*WAQCPA Trigger: AGCTGGGCATTGAGCCCACCAACCAGGCTGCGGTGG...TCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAATTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | AGAATTTCTGACGCTGCCACAGGTGGGGTGGCCACGGTCCCTGTCCTCCACTGCATCTCCACAAGCATCTaGTTTAAAGTGTTTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RISDAATGGVATVPVLHCISTSI*FKVFSC Trigger: GCAGGAAAACACTTTAAACCAGATGCTTGTGGAGAT...GCAGTGGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAGCGTCAGAAATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | ACCTTTGTTCCCTCAGCTATCTCCTTGGCTGGATGCTGGAGTCTAGCAGCTTTTTCAAAGTGCCGCTCCTaGACAGAAGGGCTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TFVPSAISLAGCWSLAAFSKCRS*TEGLRW Trigger: CCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGA...AAAAGCTGCTAGACTCCAGCATCCAGCCAAGGAGATAGCTGAGGGAACAAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | GGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAAGCACTCGGGCCTCCCCAGCAGTTaGTTTTGCAAGAAGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GASPQQHPGNPKLHSKHSGLPSS*FCKKCF Trigger: AAAACACTTCTTGCAAAAGCAACTGCTGGGGAGGCC...CGAGTGCTTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | CCGAAACCTGGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCCACGGCCTCGCTTTCTaGCAATTGCATCAATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKPGASPQQHPGNPKLHSHGLAF*QLHQSH Trigger: ATGAGATTGATGCAATTGGCAGAAAGCGAGGCCGTG...GGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCCAGGTTTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | GGCTGGATGCTGGAGTCTAGCAGCTTTTCTGTGAATTTTGCATGGTCTTATCTGCACATCGCCACAGCTTaGAGAAAGGCCAGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWMLESSSFSVNFAWSYLHIATA*RKARPG Trigger: CCCTGGCCTGGCCTTTCTCCAAGCTGTGGCGATGTG...CAGATAAGACCATGCAAAATTCACAGAAAAGCTGCTAGACTCCAGCATCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGACTCCCTTTGGAATTTTaGCTCCTAAGTCCTGATATT | + |
|
Preference number: 4 (lower is better) Translates to: KLHSKHSALTEQASTQPRLPLEF*LLSPDI Trigger: AATATCAGGACTTAGGAGCCAAAATTCCAAAGGGAG...TCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | GGAAACTTAATCAAACACAATGTAGCTCCTCACAGCCCCACACCTGGAATCCCTACAGAAGGGCTGAGGTaGCGGGCAGCAATCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNLIKHNVAPHSPTPGIPTEGLR*RAAISA Trigger: AGCACTGATTGCTGCCCGCCACCTCAGCCCTTCTGT...AGGGATTCCAGGTGTGGGGCTGTGAGGAGCTACATTGTGTTTGATTAAGTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR TCA 90 bp | ACGGAATTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGATTGTCTCACCAACACTaGAGAGGCCTCCTCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TELNLTLPSVRQRNPKARLSHQH*RGLLLA Trigger: GGCGAGGAGGAGGCCTCTTCAGTGTTGGTGAGACAA...TCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAATTCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR TCA 90 bp | CCATGCACCAGAGCCAGAGGGCTCAACCTAAACCACCCTCTGTGGTTCAAAAGGTTGGCTCCTAAGTCCTaGTATTGCTTTGGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCTRARGLNLNHPLWFKRLAPKS*YCFGFF Trigger: GAAGAACCCAAAGCAATATCAGGACTTAGGAGCCAA...CCTTTTGAACCACAGAGGGTGGTTTAGGTTGAGCCCTCTGGCTCTGGTGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | GGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAAGCACTCGCCCAGCAGTTGCTTTTaGAAGAAGTGTTTTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GASPQQHPGNPKLHSKHSPSSCF*KKCFAS Trigger: ACTGGCAAAACACTTCTTGCAAAAGCAACTGCTGGG...CGAGTGCTTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | GGAAACTTAATCAAACACAATGTAGCTCCTCACAGCCCCACACCTGGAATCCCTGCCTGGAGTAAGAGCTaGCAGCTTCCTCGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GNLIKHNVAPHSPTPGIPAWSKS*QLPRKS Trigger: GCTCTTTCGAGGAAGCTGGCAGCTCTTACTCCAGGC...AGGGATTCCAGGTGTGGGGCTGTGAGGAGCTACATTGTGTTTGATTAAGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | GGCTGGATGCTGGAGTCTAGCAGCTTTTCTGTGAATTTTGCATGGTCTTATCTGAGCAGAGGGTCTGCATaGTCCAAGAACCAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GWMLESSSFSVNFAWSYLSRGSA*SKNQPT Trigger: GGTGGGCTGGTTCTTGGAGCATGCAGACCCTCTGCT...CAGATAAGACCATGCAAAATTCACAGAAAAGCTGCTAGACTCCAGCATCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR CCA 90 bp | GGCTTGCTGACCTGCAAACACAGCCAGACTCAATACGAGACTCCATCTAAAAAGTTTGCCAGTACCAGGTaGACCAGTGAGCATCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLTCKHSQTQYETPSKKFASTR*TSEHRS Trigger: GGAGCGATGCTCACTGGTCCACCTGGTACTGGCAAA...CTTTTTAGATGGAGTCTCGTATTGAGTCTGGCTGTGTTTGCAGGTCAGCAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | CCGAAACCTGGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCTTGAGTGGACGCAAGTaGACCTTGAAAATAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PKPGASPQQHPGNPKLHSLSGRK*TLKIED Trigger: GTCCTCTATTTTCAAGGTCCACTTGCGTCCACTCAA...GGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCCAGGTTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | ACGGAATTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGAACAGAAGGGCTGAGGTaGCGGGCAGCAATCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TELNLTLPSVRQRNPKARTEGLR*RAAISA Trigger: AGCACTGATTGCTGCCCGCCACCTCAGCCCTTCTGT...TCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAATTCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR TCA 90 bp | GGAAACTTAATCAAACACAATGTAGCTCCTCACAGCCCCACACCTGGAATCCCTCCCTCTGGGAGGTTTTaGATACAGCCTCGGGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GNLIKHNVAPHSPTPGIPPSGRF*IQPRGK Trigger: TTTTCCCCGAGGCTGTATTCAAAACCTCCCAGAGGG...AGGGATTCCAGGTGTGGGGCTGTGAGGAGCTACATTGTGTTTGATTAAGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | CATCGTTCACGGAACGGCCAGGATAAAGGTGAGCCTGCAATCCCAGCACTGGGCTCAGTGCTGCTTCATTaGAAACATTGGAAATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRSRNGQDKGEPAIPALGSVLLH*KHWKYQ Trigger: CTGATATTTCCAATGTTTGCAATGAAGCAGCACTGA...GCCCAGTGCTGGGATTGCAGGCTCACCTTTATCCTGGCCGTTCCGTGAACGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | GGCTTGCTGACCTGCAAACACAGCCAGACTCAATACGAGACTCCATCTAAAAAGCCAGCATCATACACATaGGGTCGAAGAGCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLLTCKHSQTQYETPSKKPASYT*GRRAAL Trigger: GAGAGCAGCTCTTCGACCGCATGTGTATGATGCTGG...CTTTTTAGATGGAGTCTCGTATTGAGTCTGGCTGTGTTTGCAGGTCAGCAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | TGGTCGCAGGCCACACCTTTGTTCCCTCAGCTATCTCCTTGGCTGGATGCTGGACTCCCTTTGGAATTTTaGCTCCTAAGTCCTGATATT | + |
|
Preference number: 4 (lower is better) Translates to: WSQATPLFPQLSPWLDAGLPLEF*LLSPDI Trigger: AATATCAGGACTTAGGAGCCAAAATTCCAAAGGGAG...TCCAGCATCCAGCCAAGGAGATAGCTGAGGGAACAAAGGTGTGGCCTGCGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | GAAACCTGGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAACAGTTGTCTTTTCACTaGGTTGTAGGACCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETWSKSTTTSREPKAPLQQLSFH*VVGPGS Trigger: AGACCCAGGTCCTACAACCCAGTGAAAAGACAACTG...TTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCCAGGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR GCA 90 bp | TGGTCGCAGGCCACACCTTTGTTCCCTCAGCTATCTCCTTGGCTGGATGCTGGATCGCTTTCTGCCAATTaGATCAATCTCATCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: WSQATPLFPQLSPWLDAGSLSAN*INLINE Trigger: TTCATTGATGAGATTGATGCAATTGGCAGAAAGCGA...TCCAGCATCCAGCCAAGGAGATAGCTGAGGGAACAAAGGTGTGGCCTGCGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR GCA 90 bp | CACTATCACATGCACACACACACACACTTTTACAGAGTCAAGGGAGCAAGTAGAGCCTGGAGTAAGAGCTaGCAGCTTCCTCGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HYHMHTHTHFYRVKGASRAWSKS*QLPRKS Trigger: GCTCTTTCGAGGAAGCTGGCAGCTCTTACTCCAGGC...TCTACTTGCTCCCTTGACTCTGTAAAAGTGTGTGTGTGTGTGCATGTGATAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | TCCACTGCACATCTACTGGTGCGCTGGCTTTCCTTCCTAAGGGCTGAGCAGCTTTGTTCTTTAAGATCTTaGCTGTTGTCTCACCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: STAHLLVRWLSFLRAEQLCSLRS*LLSHQH Trigger: GTGTTGGTGAGACAACAGCCAAGATCTTAAAGAACA...AAGCTGCTCAGCCCTTAGGAAGGAAAGCCAGCGCACCAGTAGATGTGCAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR CCA 90 bp | ACGGAATTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGAAGCACCAGTGAAGCCTaGAGTAAGAGCTGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TELNLTLPSVRQRNPKARSTSEA*SKSCQL Trigger: AAGCTGGCAGCTCTTACTCCAGGCTTCACTGGTGCT...TCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAATTCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | TTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGAAGCCAGTTGCAAGAAGTGTTTTaGCAGTACCAGGTGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNLTLPSVRQRNPKARSQLQEVF*QYQVDQ Trigger: CTGGTCCACCTGGTACTGGCAAAACACTTCTTGCAA...CTGGCTTCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | GGAAACTTAATCAAACACAATGTAGCTCCTCACAGCCCCACACCTGGAATCCCTTTTAAAGTGTTTTCCTaGTCACTCTGGCCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNLIKHNVAPHSPTPGIPFKVFS*SLWPPR Trigger: CCTGGGAGGCCAGAGTGAGCAGGAAAACACTTTAAA...AGGGATTCCAGGTGTGGGGCTGTGAGGAGCTACATTGTGTTTGATTAAGTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | CACTATCACATGCACACACACACACACTTTTACAGAGTCAAGGGAGCAAGTAGACCAGCATCATACACATaGGGTCGAAGAGCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HYHMHTHTHFYRVKGASRPASYT*GRRAAL Trigger: GAGAGCAGCTCTTCGACCGCATGTGTATGATGCTGG...TCTACTTGCTCCCTTGACTCTGTAAAAGTGTGTGTGTGTGTGCATGTGATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | AACCTGGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAAGCATCTCCACAAGCATCTaGTTTAAAGTGTTTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLEQVHNNIQGTQSSTPSISTSI*FKVFSC Trigger: GCAGGAAAACACTTTAAACCAGATGCTTGTGGAGAT...GCTTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCCAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | ACACCTGGAATCCCTCCAAAAAGACATCACTCAGGCTTCACAGAACCTGGAGAAGGCAGCAATCAGTGCTaGTTCATTGCAAACATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TPGIPPKRHHSGFTEPGEGSNQC*FIANIG Trigger: TCCAATGTTTGCAATGAAGCAGCACTGATTGCTGCC...TTCTCCAGGTTCTGTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR GCA 90 bp | ACGGAATTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGAGCGGGCAGCAATCAGTaGTGCTTCATTGCAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: TELNLTLPSVRQRNPKARAGSNQ*CFIANI Trigger: AATGTTTGCAATGAAGCAGCACTGATTGCTGCCCGC...TCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAATTCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | GTGAATTTTGCATGGTCTTATCTGAGACGTGTGTTCGAAGTTGTCACCTGTTTTGCGACCAGTCCCCATTaGACCCCTCCTCATAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: VNFAWSYLRRVFEVVTCFATSPH*TPPHSI Trigger: TATGCTATGAGGAGGGGTCCAATGGGGACTGGTCGC...AAAACAGGTGACAACTTCGAACACACGTCTCAGATAAGACCATGCAAAATTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | GGAAACTTAATCAAACACAATGTAGCTCCTCACAGCCCCACACCTGGAATCCCTTCTTCATCAATGAGCTaGGCAGTAGCCTCACTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GNLIKHNVAPHSPTPGIPSSSMS*AVASLY Trigger: ATACAGTGAGGCTACTGCCCAGCTCATTGATGAAGA...AGGGATTCCAGGTGTGGGGCTGTGAGGAGCTACATTGTGTTTGATTAAGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS-3UTR GCA 90 bp | CAGGTTACCTCAGAAGCAGCTGTAAGAGGCTCACTTGGAAACTTAATCAAACACTTTAAAGTGTTTTCCTaGTCACTCTGGCCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVTSEAAVRGSLGNLIKHFKVFS*SLWPPR Trigger: CCTGGGAGGCCAGAGTGAGCAGGAAAACACTTTAAA...GTGTTTGATTAAGTTTCCAAGTGAGCCTCTTACAGCTGCTTCTGAGGTAACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR CCA 90 bp | GGCTGGATGCTGGAGTCTAGCAGCTTTTCTGTGAATTTTGCATGGTCTTATCTGACTTCTCAAACCCTCTaGGAGGTTTTGAATACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWMLESSSFSVNFAWSYLTSQTL*EVLNTA Trigger: GGCTGTATTCAAAACCTCCCAGAGGGTTTGAGAAGT...CAGATAAGACCATGCAAAATTCACAGAAAAGCTGCTAGACTCCAGCATCCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR CCA 90 bp | ACGGAATTAAATCTGACACTCCCATCAGTGAGGCAGAGAAACCCAAAGGCTAGATTGAGTGGACGCAAGTaGACCTTGAAAATAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TELNLTLPSVRQRNPKARLSGRK*TLKIED Trigger: GTCCTCTATTTTCAAGGTCCACTTGCGTCCACTCAA...TCTAGCCTTTGGGTTTCTCTGCCTCACTGATGGGAGTGTCAGATTTAATTCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR GCA 90 bp | ACCTTTGTTCCCTCAGCTATCTCCTTGGCTGGATGCTGGAGTCTAGCAGCTTTTTCGCTTTCTGCCAATTaGATCAATCTCATCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFVPSAISLAGCWSLAAFSLSAN*INLINE Trigger: TTCATTGATGAGATTGATGCAATTGGCAGAAAGCGA...AAAAGCTGCTAGACTCCAGCATCCAGCCAAGGAGATAGCTGAGGGAACAAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CCA 90 bp | ACACCTGGAATCCCTCCAAAAAGACATCACTCAGGCTTCACAGAACCTGGAGAATGTTCTTTAAGATCTTaGCTGTTGTCTCACCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TPGIPPKRHHSGFTEPGECSLRS*LLSHQH Trigger: GTGTTGGTGAGACAACAGCCAAGATCTTAAAGAACA...TTCTCCAGGTTCTGTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR GCA 90 bp | TATCTCCTTGGCTGGATGCTGGAGTCTAGCAGCTTTTCTGTGAATTTTGCATGGTCAGTGCTGCTTCATTaGAAACATTGGAAATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLLGWMLESSSFSVNFAWSVLLH*KHWKYQ Trigger: CTGATATTTCCAATGTTTGCAATGAAGCAGCACTGA...CCATGCAAAATTCACAGAAAAGCTGCTAGACTCCAGCATCCAGCCAAGGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS GCA 90 bp | AATGCCACAGGCCCTCACGCTGCTCCAGACCGTCCCGCCGCTCCCTaGGCATCCGCCACATCGCCACAGCTTGGAGAAAGGCCAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NATGPHAAPDRPAAP*ASATSPQLGERPGQ Trigger: CTGGCCTGGCCTTTCTCCAAGCTGTGGCGATGTGGCGGATGCGCAGGGAGCGGCGGGACGGTCTGGAGCAGCGTGAGGGCCTGTGGCATT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS GCA 90 bp | ATCTCCCCAGATGACCCTGCAGAGCAATGCCACAGGCCCTCACGCTaGTCCAGACCGTCCCGCCGCTCCCTGCGCATCCGCCACATCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISPDDPAEQCHRPSR*SRPSRRSLRIRHIA Trigger: GGCGATGTGGCGGATGCGCAGGGAGCGGCGGGACGGTCTGGAGCAGCGTGAGGGCCTGTGGCATTGCTCTGCAGGGTCATCTGGGGAGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS GCA 90 bp | GAGCCAGCTGCTGCGAGCATCTCCCCAGATGACCCTGCAGAGCAATaGCACAGGCCCTCACGCTGCTCCAGACCGTCCCGCCGCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EPAAASISPDDPAEQ*HRPSRCSRPSRRSL Trigger: CAGGGAGCGGCGGGACGGTCTGGAGCAGCGTGAGGGCCTGTGGCATTGCTCTGCAGGGTCATCTGGGGAGATGCTCGCAGCAGCTGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR CAA 90 bp | AGCTGCTCTGCGATGGCTGAGCAGCTCCCAGTCAGCAGTGGTCATAAGCCGCCCGTGATGAAGGGCACGTaGGCCTCCCCAGCAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCSAMAEQLPVSSGHKPPVMKGT*ASPAVA Trigger: AGCAACTGCTGGGGAGGCCAACGTGCCCTTCATCAC...GGGCGGCTTATGACCACTGCTGACTGGGAGCTGCTCAGCCATCGCAGAGCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR CAA 90 bp | TCCAGGGAACCCAAAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCCTCGAAAGAGCGTCCTaGCTGAGGCTTCCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SREPKAPLQALGSHRAGLLERAS*LRLPSS Trigger: GCTGGACGGAAGCCTCAGCAAGGACGCTCTTTCGAG...GAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTTTGGGTTCCCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS GCA 90 bp | ACCTGGGTCTTCTTCTCAAGGCCTCCAATGACCCTCTCGATGGCTTaGTCAAAGTGCCGCTCCTGGACAGAAGGGCTGAGGTGGCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TWVFFSRPPMTLSMA*SKCRSWTEGLRWRA Trigger: TGCCCGCCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGCCTTGAGAAGAAGACCCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
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| CDS CCA 90 bp | AGGCCTCCAATGACCCTCTCGATGGCTTGCTCAAAGTGCCGCTCCTaGACAGAAGGGCTGAGGTGGCGGGCAGCAATCAGTGCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RPPMTLSMACSKCRS*TEGLRWRAAISAAS Trigger: TGAAGCAGCACTGATTGCTGCCCGCCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
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| CDS TCA 90 bp | GGCGTAGCCAAGCCCCTTGCCTCGAGGTATGATGGACACCTCCAATaGCCCTCTCGATGGCTTGCTCAAAGTGCCGCTCCTGGACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVAKPLASRYDGHLQ*PSRWLAQSAAPGQK Trigger: CTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGTGTCCATCATACCTCGAGGCAAGGGGCTTGGCTACGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| CDS CCA 90 bp | ACACCTCCAATGACCCTCTCGATGGCTTGCTCAAAGTGCCGCTCCTaGACAGAAGGGCTGAGGTGGCGGGCAGCAATCAGTGCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TPPMTLSMACSKCRS*TEGLRWRAAISAAS Trigger: TGAAGCAGCACTGATTGCTGCCCGCCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| CDS TCA 90 bp | CCCTCTCGATGGCTTGCTCAAAGTGCCGCTCCTGGACAGAAGGGCTaGGGTGGCGGGCAGCAATCAGTGCTGCTTCATTGCAAACATTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSRWLAQSAAPGQKG*GGGQQSVLLHCKHW Trigger: CCAATGTTTGCAATGAAGCAGCACTGATTGCTGCCCGCCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS GCA 90 bp | TTCTTCTCAAGGCCTCCAATGACCCTCTCGATGGCTTGCTCAAAGTaGCGCTCCTGGACAGAAGGGCTGAGGTGGCGGGCAGCAATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FFSRPPMTLSMACSK*RSWTEGLRWRAAIS Trigger: ACTGATTGCTGCCCGCCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGCCTTGAGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS GCA 90 bp | CACCTTCAGCAGAGGGTCTGCATGCTCCAAGAACCAGCCCACCACTaGATGCCCAGCCTCGTGGTAGGCTACAGTTGTCTTTTCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HLQQRVCMLQEPAHH*MPSLVVGYSCLFTG Trigger: CCCAGTGAAAAGACAACTGTAGCCTACCACGAGGCTGGGCATGCAGTGGTGGGCTGGTTCTTGGAGCATGCAGACCCTCTGCTGAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
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| CDS-3UTR CAA 90 bp | GACAGGCCTCCACCATCCTGGCCAGGCACCCGGGAAGCTATGGCATCAGCTGAATGGCCTCCCCAGCAGTaGCTTTTGCAAGAAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DRPPPSWPGTREAMASAEWPPQQ*LLQEVF Trigger: AAACACTTCTTGCAAAAGCAACTGCTGGGGAGGCCA...TTCAGCTGATGCCATAGCTTCCCGGGTGCCTGGCCAGGATGGTGGAGGCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS-3UTR CAA 90 bp | GCCCTCTACAAATTCCTCATAGGTGGACTTCTCTGCAAAGGGCCGAGGGCCCAAGTGATGAAGGGCACGTaGGCCTCCCCAGCAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALYKFLIGGLLCKGPRAQVMKGT*ASPAVA Trigger: AGCAACTGCTGGGGAGGCCAACGTGCCCTTCATCAC...TTGGGCCCTCGGCCCTTTGCAGAGAAGTCCACCTATGAGGAATTTGTAGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | ACAGAGTCAAGGGAGCAAGTAGATTCCTCCCCAGGGCCACGAGCAGCCCCAACGGGACGCAAGTGGACCTaGAAAATAGAGGACCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TESREQVDSSPGPRAAPTGRKWT*KIEDLP Trigger: AGGCAGGTCCTCTATTTTCAAGGTCCACTTGCGTCC...CGTTGGGGCTGCTCGTGGCCCTGGGGAGGAATCTACTTGCTCCCTTGACTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | CCGAAACCTGGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCCTCGAAAGAGCGTCCTaGCTGAGGCTTCCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKPGASPQQHPGNPKLHSLERAS*LRLPSS Trigger: GCTGGACGGAAGCCTCAGCAAGGACGCTCTTTCGAG...GGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCCAGGTTTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS GCA 90 bp | CCGCTCCTGGACAGAAGGGCTGAGGTGGCGGGCAGCAATCAGTGCTaGTTCATTGCAAACATTGGAAATATCAGCACCAGTGAAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLDRRAEVAGSNQC*FIANIGNISTSEAW Trigger: CCAGGCTTCACTGGTGCTGATATTTCCAATGTTTGCAATGAAGCAGCACTGATTGCTGCCCGCCACCTCAGCCCTTCTGTCCAGGAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | CAACATCCAGGGAACCCAAAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGACCCTCTGGGAGGTTTaGAATACAGCCTCGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QHPGNPKLHSKHSALTEQTLWEV*NTASGK Trigger: TTTCCCCGAGGCTGTATTCAAAACCTCCCAGAGGGT...CTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTTTGGGTTCCCTGGATGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | AGCCCCTCAGGAAGGGATGTGTCCTCCTCTAGGCTGCCGGTGCCCTCTACAAATCCCCAGCAGTTGCTTTaGCAAGAAGTGTTTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPSGRDVSSSRLPVPSTNPQQLL*QEVFCQ Trigger: CTGGCAAAACACTTCTTGCAAAAGCAACTGCTGGGG...ATTTGTAGAGGGCACCGGCAGCCTAGAGGAGGACACATCCCTTCCTGAGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | TGGTCGCAGGCCACACCTTTGTTCCCTCAGCTATCTCCTTGGCTGGATGCTGGAATAGAGGACCTGCCTTaGATATCAGGGGGACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: WSQATPLFPQLSPWLDAGIEDLP*ISGGPM Trigger: CATCGGTCCCCCTGATATCAAAGGCAGGTCCTCTAT...TCCAGCATCCAGCCAAGGAGATAGCTGAGGGAACAAAGGTGTGGCCTGCGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | TGCACCAGAGCCAGAGGGCTCAACCTAAACCACCCTCTGTGGTTCAAAAGGGGGATAGAGGACCTGCCTTaGATATCAGGGGGACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: CTRARGLNLNHPLWFKRGIEDLP*ISGGPM Trigger: CATCGGTCCCCCTGATATCAAAGGCAGGTCCTCTAT...CCCCCTTTTGAACCACAGAGGGTGGTTTAGGTTGAGCCCTCTGGCTCTGGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | CAGAACCTGGAGAACCGGCCAGCCTTAGGTCCAGGGCCTATGGTCGCAGGCCACGCTTCATTGCAAACATaGGAAATATCAGCACCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QNLENRPALGPGPMVAGHASLQT*EISAPV Trigger: CACTGGTGCTGATATTTCCAATGTTTGCAATGAAGC...GTGGCCTGCGACCATAGGCCCTGGACCTAAGGCTGGCCGGTTCTCCAGGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | AAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGACGTGGTAGGCTACAGTaGTCTTTTCACTGGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KLHSKHSALTEQASTQPRRGRLQ*SFHWVV Trigger: TACAACCCAGTGAAAAGACAACTGTAGCCTACCACG...TCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS TCA 90 bp | CATCGATGTTGTTCTTTAAGATCTTGGCTGTTGTCTCACCAACACTaGAGAGGCCTCCTCCTCGCCCACCGCGACCAGTCCCCATTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRCCSLRSWLLSHQH*RGLLLAHRDQSPLD Trigger: GTCCAATGGGGACTGGTCGCGGTGGGCGAGGAGGAGGCCTCTTCAGTGTTGGTGAGACAACAGCCAAGATCTTAAAGAACAACATCGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS TCA 90 bp | TTTCACTGGGTTGTAGGACCTGGGTCTTCTTCTCAAGGCCTCCAATaGCCCTCTCGATGGCTTGCTCAAAGTGCCGCTCCTGGACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FHWVVGPGSSSQGLQ*PSRWLAQSAAPGQK Trigger: CTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGCCTTGAGAAGAAGACCCAGGTCCTACAACCCAGTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS GCA 90 bp | AACCTCTCAGATGTCGTCCCAGGAACAGGAATAACACGCACAAACTaGTTGTTCACAACCTCTAGCCGGTCCACCAGACCTCTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLSDVVPGTGITRTN*LFTTSSRSTRPLAR Trigger: CCTGGCCAGAGGTCTGGTGGACCGGCTAGAGGTTGTGAACAAGCAGTTTGTGCGTGTTATTCCTGTTCCTGGGACGACATCTGAGAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | CAACATCCAGGGAACCCAAAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGTGGCCTCCCCAGCAGTaGCTTTTGCAAGAAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QHPGNPKLHSKHSALTEQWPPQQ*LLQEVF Trigger: AAACACTTCTTGCAAAAGCAACTGCTGGGGAGGCCA...CTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTTTGGGTTCCCTGGATGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | CAGCCCCACACCTGGAATCCCTCCAAAAAGACATCACTCAGGCTTCACAGAACCCGTGTTTTCGGGCCATaGCAAACATGTCACGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: QPHTWNPSKKTSLRLHRTRVFGP*QTCHGP Trigger: GGGTCCGTGACATGTTTGCAATGGCCCGAAAACACG...GGTTCTGTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGTGGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | CTCACAGCCCCACACCTGGAATCCCTCCAAAAAGACATCACTCAGGCTTCACAGCGTGTTTTCGGGCCATaGCAAACATGTCACGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: LTAPHLESLQKDITQASQRVFGP*QTCHGP Trigger: GGGTCCGTGACATGTTTGCAATGGCCCGAAAACACG...CTGTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGTGGGGCTGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGAACCCAAAGCTCCACTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCCTGAATTTCCTGGGCTaGCACTTTTTCTGTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SREPKAPLQALGSHRAGLLNFLG*HFFCSS Trigger: AGAAGAACAGAAAAAGTGCAAGCCCAGGAAATTCAG...GAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAGTGGAGCTTTGGGTTCCCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | ACACCCAGTCCACCCAATCTGGCCCTTAGCCGGGCCCCAAAGAGAAGGACAGGCTTGTTCTTTAAGATCTaGGCTGTTGTCTCACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TPSPPNLALSRAPKRRTGLFFKI*AVVSPT Trigger: TGTTGGTGAGACAACAGCCAAGATCTTAAAGAACAA...GCCTGTCCTTCTCTTTGGGGCCCGGCTAAGGGCCAGATTGGGTGGACTGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | CTCACAGCCCCACACCTGGAATCCCTCCAAAAAGACATCACTCAGGCTTCACAGGGACGCAAGTGGACCTaGAAAATAGAGGACCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTAPHLESLQKDITQASQGRKWT*KIEDLP Trigger: AGGCAGGTCCTCTATTTTCAAGGTCCACTTGCGTCC...CTGTGAAGCCTGAGTGATGTCTTTTTGGAGGGATTCCAGGTGTGGGGCTGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | AACAGAATTTCTGACGCTGCCACAGGTGGGGTGGCCACGGTCCCTGTCCTCCACGCTTCATTGCAAACATaGGAAATATCAGCACCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NRISDAATGGVATVPVLHASLQT*EISAPV Trigger: CACTGGTGCTGATATTTCCAATGTTTGCAATGAAGC...GTGGAGGACAGGGACCGTGGCCACCCCACCTGTGGCAGCGTCAGAAATTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGCACTCGGCTCTCACAGAGCAGGCCTCGACACAGCCCAGATTAACAGGCTGAATTTCCTGGGCTaGCACTTTTTCTGTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQALGSHRAGLDTAQINRLNFLG*HFFCSS Trigger: AGAAGAACAGAAAAAGTGCAAGCCCAGGAAATTCAG...CCTGTTAATCTGGGCTGTGTCGAGGCCTGCTCTGTGAGAGCCGAGTGCTTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | TGGTCGCAGGCCACACCTTTGTTCCCTCAGCTATCTCCTTGGCTGGATGCTGGAAACCGCACATCGATGTaGTTCTTTAAGATCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WSQATPLFPQLSPWLDAGNRTSM*FFKILA Trigger: AGCCAAGATCTTAAAGAACAACATCGATGTGCGGTT...TCCAGCATCCAGCCAAGGAGATAGCTGAGGGAACAAAGGTGTGGCCTGCGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | GAAACCTGGAGCAAGTCCACAACAACATCCAGGGAACCCAAAGCTCCACTCCAACCCCAGCAGTTGCTTTaGCAAGAAGTGTTTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ETWSKSTTTSREPKAPLQPQQLL*QEVFCQ Trigger: CTGGCAAAACACTTCTTGCAAAAGCAACTGCTGGGG...TTGGAGTGGAGCTTTGGGTTCCCTGGATGTTGTTGTGGACTTGCTCCAGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | GGCTTGCTGACCTGCAAACACAGCCAGACTCAATACGAGACTCCATCTAAAAAGAGGAAATTCTCCCTTTaGCATCCGTTTCCACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLLTCKHSQTQYETPSKKRKFSL*HPFPPG Trigger: CCCTGGTGGAAACGGATGCAAAAGGGAGAATTTCCT...CTTTTTAGATGGAGTCTCGTATTGAGTCTGGCTGTGTTTGCAGGTCAGCAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | AACTCACTCTGTAAACCAGGCTGGCCTCGAACTCAGGAATCAAGCCTGCCTCTGAACCGCACATCGATGTaGTTCTTTAAGATCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NSLCKPGWPRTQESSLPLNRTSM*FFKILA Trigger: AGCCAAGATCTTAAAGAACAACATCGATGTGCGGTT...CAGAGGCAGGCTTGATTCCTGAGTTCGAGGCCAGCCTGGTTTACAGAGTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | CACTATCACATGCACACACACACACACTTTTACAGAGTCAAGGGAGCAAGTAGAACCCTCTGGGAGGTTTaGAATACAGCCTCGGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HYHMHTHTHFYRVKGASRTLWEV*NTASGK Trigger: TTTCCCCGAGGCTGTATTCAAAACCTCCCAGAGGGT...TCTACTTGCTCCCTTGACTCTGTAAAAGTGTGTGTGTGTGTGCATGTGATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS TCA 90 bp | GGTGGCCACGGCCTCGCTTTCTGCCAATTGCATCAATCTCATCAATaGATAAAATACAAGGAGCGTGTTTTCGGGCCATTGCAAACATGT | + |
|
Preference number: 5 (lower is better) Translates to: GGHGLAFCQLHQSHQ*IKYKERVFGPLQTC Trigger: ACATGTTTGCAATGGCCCGAAAACACGCTCCTTGTATTTTATTCATTGATGAGATTGATGCAATTGGCAGAAAGCGAGGCCGTGGCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS-3UTR CAA 90 bp | CACTATCACATGCACACACACACACACTTTTACAGAGTCAAGGGAGCAAGTAGATTGTTCTTTAAGATCTaGGCTGTTGTCTCACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: HYHMHTHTHFYRVKGASRLFFKI*AVVSPT Trigger: TGTTGGTGAGACAACAGCCAAGATCTTAAAGAACAA...TCTACTTGCTCCCTTGACTCTGTAAAAGTGTGTGTGTGTGTGCATGTGATAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS GCA 72 bp | GGCCCTCACGCTGCTCCAGACCGTCCCGCCGCTCCCTaGGCATCCGCCACATCGCCACAGCTTGGAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GPHAAPDRPAAP*ASATSPQLGER Trigger: CCTTTCTCCAAGCTGTGGCGATGTGGCGGATGCGCAGGGAGCGGCGGGACGGTCTGGAGCAGCGTGAGGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS GCA 72 bp | GATGACCCTGCAGAGCAATGCCACAGGCCCTCACGCTaGTCCAGACCGTCCCGCCGCTCCCTGCGCATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: DDPAEQCHRPSR*SRPSRRSLRIR Trigger: GCGGATGCGCAGGGAGCGGCGGGACGGTCTGGAGCAGCGTGAGGGCCTGTGGCATTGCTCTGCAGGGTCATC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS GCA 72 bp | GCTGCGAGCATCTCCCCAGATGACCCTGCAGAGCAATaGCACAGGCCCTCACGCTGCTCCAGACCGTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AASISPDDPAEQ*HRPSRCSRPSR Trigger: GCGGGACGGTCTGGAGCAGCGTGAGGGCCTGTGGCATTGCTCTGCAGGGTCATCTGGGGAGATGCTCGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS GCA 72 bp | AGGCCTCCAATGACCCTCTCGATGGCTTGCTCAAAGTaGCGCTCCTGGACAGAAGGGCTGAGGTGGCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPPMTLSMACSK*RSWTEGLRWRA Trigger: TGCCCGCCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
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| CDS CAA 90 bp | GACCTGGGTCTTCTTCTCAAGGCCTCCAATGACCCTCTCGATGGCTaGCTCAAAGTGCCGCTCCTGGACAGAAGGGCTGAGGTGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DLGLLLKASNDPLDG*LKVPLLDRRAEVAG Trigger: GCCCGCCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGCCTTGAGAAGAAGACCCAGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
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| CDS CAA 90 bp | TTGCCTCGAGGTATGATGGACACCTCCAATGACCCTCTCGATGGCTaGCTCAAAGTGCCGCTCCTGGACAGAAGGGCTGAGGTGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPRGMMDTSNDPLDG*LKVPLLDRRAEVAG Trigger: GCCCGCCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGTGTCCATCATACCTCGAGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| CDS TCA 72 bp | GGTACTGGGCGTAGCCAAGCCCCTTGCCTCGAGGTATaGTGGACACCTTCAGCAGAGGGTCTGCATGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTGRSQAPCLEV*WTPSAEGLHAP Trigger: TGGAGCATGCAGACCCTCTGCTGAAGGTGTCCATCATACCTCGAGGCAAGGGGCTTGGCTACGCCCAGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS GCA 72 bp | GCCTCGAGGTATGATGGACACCTTCAGCAGAGGGTCTaGATGCTCCAAGAACCAGCCCACCACTGCATGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASRYDGHLQQRV*MLQEPAHHCMP Trigger: GGGCATGCAGTGGTGGGCTGGTTCTTGGAGCATGCAGACCCTCTGCTGAAGGTGTCCATCATACCTCGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
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| CDS CCA 72 bp | ATGACCCTCTCGATGGCTTGCTCAAAGTGCCGCTCCTaGACAGAAGGGCTGAGGTGGCGGGCAGCAATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: MTLSMACSKCRS*TEGLRWRAAIS Trigger: ACTGATTGCTGCCCGCCACCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS CAA 90 bp | AACCGGCCAGGCCGTGTCAGGGCTGGGTCAAGGATATCAGGGCGATaGGTGCCGGCTAACACTACCACATTAGTGGAAGAGTTGAACCCG | + |
|
Preference number: 6 (lower is better) Translates to: NRPGRVRAGSRISGR*VPANTTTLVEELNP Trigger: CGGGTTCAACTCTTCCACTAATGTGGTAGTGTTAGCCGGCACCAATCGCCCTGATATCCTTGACCCAGCCCTGACACGGCCTGGCCGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS TCA 72 bp | GCAGCCTGGTTGGTGGGCTCAATGCCCAGCTCCCACTaGGCAGACTCGAGGTTCCGTTCAAAGGTGTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: AAWLVGSMPSSH*ADSRFRSKVST Trigger: TGTTGACACCTTTGAACGGAACCTCGAGTCTGCTCAGTGGGAGCTGGGCATTGAGCCCACCAACCAGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS GCA 72 bp | CAGAGGGTCTGCATGCTCCAAGAACCAGCCCACCACTaGATGCCCAGCCTCGTGGTAGGCTACAGTTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QRVCMLQEPAHH*MPSLVVGYSCL Trigger: AAGACAACTGTAGCCTACCACGAGGCTGGGCATGCAGTGGTGGGCTGGTTCTTGGAGCATGCAGACCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS GCA 72 bp | TTCTTCTCAAGGCCTCCAATGACCCTCTCGATGGCTTaGTCAAAGTGCCGCTCCTGGACAGAAGGGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FFSRPPMTLSMA*SKCRSWTEGLR Trigger: CCTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGCCTTGAGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
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| CDS CAA 72 bp | GGCCGTGTCAGGGCTGGGTCAAGGATATCAGGGCGATaGGTGCCGGCTAACACTACCACATTAGTGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRVRAGSRISGR*VPANTTTLVEE Trigger: CTCTTCCACTAATGTGGTAGTGTTAGCCGGCACCAATCGCCCTGATATCCTTGACCCAGCCCTGACACGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS CAA 72 bp | CTTCTTCTCAAGGCCTCCAATGACCCTCTCGATGGCTaGCTCAAAGTGCCGCTCCTGGACAGAAGGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLKASNDPLDG*LKVPLLDRRAE Trigger: CTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGCCTTGAGAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
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| CDS CAA 72 bp | GGTATGATGGACACCTCCAATGACCCTCTCGATGGCTaGCTCAAAGTGCCGCTCCTGGACAGAAGGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GMMDTSNDPLDG*LKVPLLDRRAE Trigger: CTCAGCCCTTCTGTCCAGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGTGTCCATCATACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098320.6 |
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| CDS CAA 90 bp | AGAACCAGCCCACCACTGCATGCCCAGCCTCGTGGTAGGCTACAGTaGTCTTTTCACTGGGTTGTAGGACCTGGGTCTTCTTCTCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RTSPPLHAQPRGRLQ*SFHWVVGPGSSSQG Trigger: GCCTTGAGAAGAAGACCCAGGTCCTACAACCCAGTGAAAAGACAACTGTAGCCTACCACGAGGCTGGGCATGCAGTGGTGGGCTGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
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| CDS TCA 72 bp | TGTTCTTTAAGATCTTGGCTGTTGTCTCACCAACACTaGAGAGGCCTCCTCCTCGCCCACCGCGACCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSLRSWLLSHQH*RGLLLAHRDQS Trigger: GGACTGGTCGCGGTGGGCGAGGAGGAGGCCTCTTCAGTGTTGGTGAGACAACAGCCAAGATCTTAAAGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS TCA 72 bp | GTTGTAGGACCTGGGTCTTCTTCTCAAGGCCTCCAATaGCCCTCTCGATGGCTTGCTCAAAGTGCCGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VVGPGSSSQGLQ*PSRWLAQSAAP Trigger: AGGAGCGGCACTTTGAGCAAGCCATCGAGAGGGTCATTGGAGGCCTTGAGAAGAAGACCCAGGTCCTACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS CCA 72 bp | AAGAGCGTCCTTGCTGAGGCTTCCGTCCAGCTTGAGTaGACGCAAGTGGACCTTGAAAATAGAGGACCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KSVLAEASVQLE*TQVDLENRGPA Trigger: GGCAGGTCCTCTATTTTCAAGGTCCACTTGCGTCCACTCAAGCTGGACGGAAGCCTCAGCAAGGACGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS CAA 72 bp | CCACCACTGCATGCCCAGCCTCGTGGTAGGCTACAGTaGTCTTTTCACTGGGTTGTAGGACCTGGGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PPLHAQPRGRLQ*SFHWVVGPGSS Trigger: AGAAGACCCAGGTCCTACAACCCAGTGAAAAGACAACTGTAGCCTACCACGAGGCTGGGCATGCAGTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001520.13 |
||
| CDS CAA 90 bp | GGGCTGAGGTGGCGGGCAGCAATCAGTGCTGCTTCATTGCAAACATaGGAAATATCAGCACCAGTGAAGCCTGGAGTAAGAGCTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLRWRAAISAASLQT*EISAPVKPGVRAAS Trigger: GCTGGCAGCTCTTACTCCAGGCTTCACTGGTGCTGATATTTCCAATGTTTGCAATGAAGCAGCACTGATTGCTGCCCGCCACCTCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS CAA 72 bp | GTCGTCCCAGGAACAGGAATAACACGCACAAACTGCTaGTTCACAACCTCTAGCCGGTCCACCAGACCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VVPGTGITRTNC*FTTSSRSTRPL Trigger: CAGAGGTCTGGTGGACCGGCTAGAGGTTGTGAACAAGCAGTTTGTGCGTGTTATTCCTGTTCCTGGGACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS GCA 72 bp | GATGTCGTCCCAGGAACAGGAATAACACGCACAAACTaGTTGTTCACAACCTCTAGCCGGTCCACCAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: DVVPGTGITRTN*LFTTSSRSTRP Trigger: AGGTCTGGTGGACCGGCTAGAGGTTGTGAACAAGCAGTTTGTGCGTGTTATTCCTGTTCCTGGGACGACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS CAA 72 bp | AGGCTTCCGTCCAGCTTGAGTGGACGCAAGTGGACCTaGAAAATAGAGGACCTGCCTTTGATATCAGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLPSSLSGRKWT*KIEDLPLISGG Trigger: TCCCCCTGATATCAAAGGCAGGTCCTCTATTTTCAAGGTCCACTTGCGTCCACTCAAGCTGGACGGAAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS CAA 72 bp | GGGCTGAGGTGGCGGGCAGCAATCAGTGCTGCTTCATaGCAAACATTGGAAATATCAGCACCAGTGAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLRWRAAISAAS*QTLEISAPVKP Trigger: AGGCTTCACTGGTGCTGATATTTCCAATGTTTGCAATGAAGCAGCACTGATTGCTGCCCGCCACCTCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS CAA 90 bp | TGGACAGAAGGGCTGAGGTGGCGGGCAGCAATCAGTGCTGCTTCATaGCAAACATTGGAAATATCAGCACCAGTGAAGCCTGGAGTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WTEGLRWRAAISAAS*QTLEISAPVKPGVR Trigger: TCTTACTCCAGGCTTCACTGGTGCTGATATTTCCAATGTTTGCAATGAAGCAGCACTGATTGCTGCCCGCCACCTCAGCCCTTCTGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS TCA 72 bp | TTGCAAGAAGTGTTTTGCCAGTACCAGGTGGACCAGTaGGCATCGCTCCCTTTGGAATTTTGGCTCCTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LQEVFCQYQVDQ*ASLPLEFWLLS Trigger: ACTTAGGAGCCAAAATTCCAAAGGGAGCGATGCTCACTGGTCCACCTGGTACTGGCAAAACACTTCTTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
||
| CDS GCA 72 bp | CGGAAGTCCTTGTCGTCCCAAGGAAATTCTCCCTTTTaGATCCGTTTCCACCAGGGAAAATCATCTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RKSLSSQGNSPF*IRFHQGKSSPF Trigger: GAAAGGAGATGATTTTCCCTGGTGGAAACGGATGCAAAAGGGAGAATTTCCTTGGGACGACAAGGACTTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS CAA 72 bp | TTGGTGCCGGCTAACACTACCACATTAGTGGAAGAGTaGAACCCGTCCATCTCCACAAGCATCTGGTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: LVPANTTTLVEE*NPSISTSIWFK Trigger: TTTAAACCAGATGCTTGTGGAGATGGACGGGTTCAACTCTTCCACTAATGTGGTAGTGTTAGCCGGCACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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| CDS TCA 72 bp | CTCTGGCCAGGTAATACTGCACGAAGTGTTTCCAGGTaGTCTCTTTTCCGGGATCTCGGAAATAAAAATATA | + |
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Preference number: 6 (lower is better) Translates to: LWPGNTARSVSR*SLFRDLGNKNI Trigger: TATATTTTTATTTCCGAGATCCCGGAAAAGAGATCACCTGGAAACACTTCGTGCAGTATTACCTGGCCAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001520.13 ENSMUST00000098320.6 |
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