Pregenerated sensors for AFG1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038302Ensembl transcript IDs: ENSMUST00000041024.15, ENSMUST00000133326.8, ENSMUST00000149832.2, ENSMUST00000151747.8
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGTACTGCTCCGTCTGCATCTCTGTGAGCCGGGAAATGGTGCGCTaGAAGGCGAAGATTTCCTCCTCCCCCGTAAACATGGAGAGCCCG | + |
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Preference number: 1 (lower is better) Translates to: QYCSVCISVSREMVR*KAKISSSPVNMESP Trigger: CGGGCTCTCCATGTTTACGGGGGAGGAGGAAATCTTCGCCTTTCAGCGCACCATTTCCCGGCTCACAGAGATGCAGACGGAGCAGTACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR CCA 90 bp | CTGGAGCGTATCACAATATTCTTGAGTGTGGGCAGCACCATCCCATaGGCTGGGTCCCAGGCTGAGCAAAGAGAACACCACCGAGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LERITIFLSVGSTIP*AGSQAEQREHHRVQ Trigger: CTGGACTCGGTGGTGTTCTCTTTGCTCAGCCTGGGACCCAGCCCATGGGATGGTGCTGCCCACACTCAAGAATATTGTGATACGCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR TCA 90 bp | TGCTTCTGTCCCCTTCAATCCAGTACTGCTCCGTCTGCATCTCTGTaGGCCGGGAAATGGTGCGCTGAAAGGCGAAGATTTCCTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: CFCPLQSSTAPSASL*AGKWCAERRRFPPP Trigger: GGGAGGAGGAAATCTTCGCCTTTCAGCGCACCATTTCCCGGCTCACAGAGATGCAGACGGAGCAGTACTGGATTGAAGGGGACAGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR GCA 90 bp | GCCCGGCTGAGTCCTGGCTCAGCCCCAAATCATCCATCAGGATTCTaGTTTGGTCCGACTCACTGTCCTGATGCTGATGCAGAAACAAGC | + |
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Preference number: 1 (lower is better) Translates to: ARLSPGSAPNHPSGF*FGPTHCPDADAETS Trigger: GCTTGTTTCTGCATCAGCATCAGGACAGTGAGTCGGACCAAAGCAGAATCCTGATGGATGATTTGGGGCTGAGCCAGGACTCAGCCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
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| 3UTR GCA 90 bp | AATAGTCACTTGCTCCAAGTGGTCTCTCACACAGCTCTTCAAATGTaGAGTCGGCAACGCTTCCACAGGCTTTATTCAGCCGCAGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: NSHLLQVVSHTALQM*SRQRFHRLYSAAAL Trigger: GAGAGCTGCGGCTGAATAAAGCCTGTGGAAGCGTTGCCGACTGCACATTTGAAGAGCTGTGTGAGAGACCACTTGGAGCAAGTGACTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
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| 3UTR TCA 90 bp | AGTAGGATGCCACTTGTTTCTTACAGCGAATGTATTTCTACAGTGTaGCTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACATCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: SRMPLVSYSECISTV*LLCSRSWEVHRHPA Trigger: TGCAGGATGTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAAGTGGCATCCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR TCA 90 bp | ATCAATGAGAGTGATGAATCTTCTCGCTTGCGTCCTCTTTGCCAGTaGAAACTGCGGAATGTTTCGTATGATTACCGTATCAAAATTCTT | + |
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Preference number: 1 (lower is better) Translates to: INESDESSRLRPLCQ*KLRNVSYDYRIKIL Trigger: AAGAATTTTGATACGGTAATCATACGAAACATTCCGCAGTTTTCACTGGCAAAGAGGACGCAAGCGAGAAGATTCATCACTCTCATTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
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| 3UTR TCA 90 bp | TCGCTTGCGTCCTCTTTGCCAGTGAAAACTGCGGAATGTTTCGTATaGTTACCGTATCAAAATTCTTTGATAATTCCAAATAGTCACTTG | + |
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Preference number: 1 (lower is better) Translates to: SLASSLPVKTAECFV*LPYQNSLIIPNSHL Trigger: CAAGTGACTATTTGGAATTATCAAAGAATTTTGATACGGTAATCATACGAAACATTCCGCAGTTTTCACTGGCAAAGAGGACGCAAGCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCAGTGACGTCTCGCAGTaGCATCTCACTGTCTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: GSGSASSSTRPIRILEPASDVSQ*HLTVSQ Trigger: CTGCGAGACAGTGAGATGTCACTGCGAGACGTCACT...GGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR CCA 90 bp | CGTCTGCATCTCTGTGAGCCGGGAAATGGTGCGCTGAAAGGCGAAGATTTCCTCGGCAGCACCATCCCATaGGCTGGGTCCCAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RLHLCEPGNGALKGEDFLGSTIP*AGSQAE Trigger: CTCAGCCTGGGACCCAGCCCATGGGATGGTGCTGCC...GAGGAAATCTTCGCCTTTCAGCGCACCATTTCCCGGCTCACAGAGATGCAGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCCACTGCCTGCTAACCTaGATCTGCTGGTTAGACACG | + |
|
Preference number: 2 (lower is better) Translates to: LWLCLLQHSTNQDPGTCPHCLLT*ICWLDT Trigger: CGTGTCTAACCAGCAGATCCAGGTTAGCAGGCAGTG...GGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCGACCAATCAGGATCCTaGAACCTGCCCCATTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: WLWLCLLQHSTNQDPGTCDQSGS*NLPHFG Trigger: GCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTC...GCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR CAA 90 bp | CCGGTAATCTACCCCAGAATCCAGCTGGAGCGTATCACAATATTCTaGAGTGTGGGCAGCACCATCCCATGGGCTGGGTCCCAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PVIYPRIQLERITIF*SVGSTIPWAGSQAE Trigger: CTCAGCCTGGGACCCAGCCCATGGGATGGTGCTGCCCACACTCAAGAATATTGTGATACGCTCCAGCTGGATTCTGGGGTAGATTACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCGTATCACAATATTCTTaGGTGTGGGCAGCACCATCC | + |
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Preference number: 2 (lower is better) Translates to: LWLCLLQHSTNQDPGTCPVSQYS*VWAAPS Trigger: GGATGGTGCTGCCCACACTCAAGAATATTGTGATAC...GGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR CCA 90 bp | AGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTCAGAATGCTCCTGTGGGTGTaGCTCTGGCTCTGCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: STRPIRILEPAPFWLSVRMLLWV*LWLCLL Trigger: GAGGAGGCAGAGCCAGAGCCACACCCACAGGAGCAT...TCTGACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCGTCCAGAGGGCAAAGTaGATTGATGATGACGAAATG | + |
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Preference number: 2 (lower is better) Translates to: LWLCLLQHSTNQDPGTCPVQRAK*IDDDEM Trigger: CATTTCGTCATCATCAATGCACTTTGCCCTCTGGAC...GGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCATCTCTGTGAGCCGGGAAATGGTGCGCTGAAAGGCGAAGATTTCCTCCTCGCCGAAGCTGGGAGGTaGACAGACATCCTGCATACT | + |
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Preference number: 2 (lower is better) Translates to: LHLCEPGNGALKGEDFLLAEAGR*TDILHT Trigger: AGTATGCAGGATGTCTGTGCACCTCCCAGCTTCGGC...GAGGAGGAAATCTTCGCCTTTCAGCGCACCATTTCCCGGCTCACAGAGATGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTATTTCTACAGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACGTGTGGCTCTGGCTCTaGCTCCTCCAGCACTCGACC | + |
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Preference number: 2 (lower is better) Translates to: NVFLQCDYCAAEAGRCTDVWLWL*LLQHST Trigger: GGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCCACAC...GTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGAGTGTGGCTCTGGCTCTaGCTCCTCCAGCACTCGACC | + |
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Preference number: 2 (lower is better) Translates to: QVSFQFPTRPNSVTQDQGVWLWL*LLQHST Trigger: GGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCCACAC...TCCTTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCAAGTGGTCTCTCACACAGCTCTTCAAATGTGCAGTCGGCAACGCTTCCACACACTCCTGCTGCCATaGCTCGCAGCCATGCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LQVVSHTALQMCSRQRFHTLLLP*LAAMLN Trigger: GTTCAGCATGGCTGCGAGGCATGGCAGCAGGAGTGT...GTGGAAGCGTTGCCGACTGCACATTTGAAGAGCTGTGTGAGAGACCACTTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTACCTGCTGTGGGTGTGGCTCTaGCTCTGCCTCCTCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: CQRGDLPISWNFLLAPYLLWVWL*LCLLQH Trigger: GTGCTGGAGGAGGCAGAGCCAGAGCCACACCCACAG...CAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTGGTGCACAGACATCCTaGATACTCTGCCTGTGCGTT | + |
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Preference number: 2 (lower is better) Translates to: LQHSTNQDPGTCPILAVCGAQTS*ILCLCV Trigger: AACGCACAGGCAGAGTATGCAGGATGTCTGTGCACC...ACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACATCCTGCATACTCCACTGCCTGCTAACCTaGATCTGCTGGTTAGACACG | + |
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Preference number: 2 (lower is better) Translates to: SVTTVQPKLGGAQTSCILHCLLT*ICWLDT Trigger: CGTGTCTAACCAGCAGATCCAGGTTAGCAGGCAGTG...GAGTATGCAGGATGTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCTTCTTTGTTTTAACCTaGACAGTAGGATGCCACTTG | + |
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Preference number: 2 (lower is better) Translates to: LWLCLLQHSTNQDPGTCPFFVLT*TVGCHL Trigger: CAAGTGGCATCCTACTGTTCAGGTTAAAACAAAGAA...GGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR TCA 90 bp | GACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTGTCGGCTGGGTCCCAGGCTaGGCAAAGAGAACACCACCG | + |
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Preference number: 2 (lower is better) Translates to: DISLSRSPNQSPFPFNLVGWVPG*AKRTPP Trigger: CGGTGGTGTTCTCTTTGCTCAGCCTGGGACCCAGCC...GACAAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTCATGGGCTCAGGCACTaGCTGCTAACCTGGATCTGC | + |
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Preference number: 2 (lower is better) Translates to: LSVRGETCQSAGIFYLLLHGLRH*LLTWIC Trigger: GCAGATCCAGGTTAGCAGGCAGTGCCTGAGCCCATG...AAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCATCAGGATTCTGCTTTGGTCCGACTCACTGTCCTGATGCTGATGCAGAAAACCTCACACTCCTGCTaGCATGCCTCGCAGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: IHQDSALVRLTVLMLMQKTSHSC*HASQPC Trigger: GCATGGCTGCGAGGCATGGCAGCAGGAGTGTGAGGT...TTTCTGCATCAGCATCAGGACAGTGAGTCGGACCAAAGCAGAATCCTGATGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTACCTGCGGGAAATGGTGCGCTaGAAGGCGAAGATTTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: CQRGDLPISWNFLLAPYLREMVR*KAKISS Trigger: GGAGGAAATCTTCGCCTTTCAGCGCACCATTTCCCG...CAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTGCCGAAGCTGGGAGGTaGACAGACATCCTGCATACT | + |
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Preference number: 2 (lower is better) Translates to: LSVRGETCQSAGIFYLLLAEAGR*TDILHT Trigger: AGTATGCAGGATGTCTGTGCACCTCCCAGCTTCGGC...AAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR GCA 90 bp | TATCAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGGAGGGATGGTCCATaGTCCTGTGGGTGTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: YQVSFQFPTRPNSVTQDQGRDGP*SCGCGS Trigger: AGAGCCACACCCACAGGAGCATGGACCATCCCTCCC...TTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR CCA 90 bp | AGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTCAGAGTCACTTGCTCCAAGTaGTCTCTCACACAGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: STRPIRILEPAPFWLSVRVTCSK*SLTQLF Trigger: GAAGAGCTGTGTGAGAGACCACTTGGAGCAAGTGAC...TCTGACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTATTTCTACAGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACCGCAGCTCTCTGCCTTaGACTTTCAGAATCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: NVFLQCDYCAAEAGRCTDRSSLP*TFRILG Trigger: CCCAAGGATTCTGAAAGTGCAAGGCAGAGAGCTGCG...GTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTACCTGGACCAATCAGGATCCTaGAACCTGCCCCATTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: CQRGDLPISWNFLLAPYLDQSGS*NLPHFG Trigger: GCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTC...CAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR TCA 90 bp | ACACGTGTTCTTTCTAGAGCTGAGGAAACCTTGAGGCCCAAAGGTTATTGCCATAGTGACGTCTCGCAGTaGCATCTCACTGTCTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: TRVLSRAEETLRPKGYCHSDVSQ*HLTVSQ Trigger: CTGCGAGACAGTGAGATGTCACTGCGAGACGTCACT...ATGGCAATAACCTTTGGGCCTCAAGGTTTCCTCAGCTCTAGAAAGAACACGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTACCTGCGTCCTCTTTGCCAGTaGAAACTGCGGAATGTTTCG | + |
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Preference number: 2 (lower is better) Translates to: CQRGDLPISWNFLLAPYLRPLCQ*KLRNVS Trigger: CGAAACATTCCGCAGTTTTCACTGGCAAAGAGGACG...CAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR CCA 90 bp | AGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTCAGAGACCTGCCAATCAGCTaGAATTTTCTACTTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: STRPIRILEPAPFWLSVRDLPIS*NFLLAP Trigger: AGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTC...TCTGACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTACCTGTGTATTTCTACAGTGTaGCTACTGTGCAGCCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: CQRGDLPISWNFLLAPYLCISTV*LLCSRS Trigger: GCTTCGGCTGCACAGTAGTCACACTGTAGAAATACA...CAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTTACTTGCTCCTTACCTaGTGGCTTTATAACCTATGT | + |
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Preference number: 2 (lower is better) Translates to: LQHSTNQDPGTCPILAVCYLLLT*WLYNLC Trigger: ACATAGGTTATAAAGCCATCAGGTAAGGAGCAAGTA...ACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR GCA 90 bp | TATCAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGTGCACAGACATCCTaGATACTCTGCCTGTGCGTT | + |
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Preference number: 2 (lower is better) Translates to: YQVSFQFPTRPNSVTQDQGAQTS*ILCLCV Trigger: AACGCACAGGCAGAGTATGCAGGATGTCTGTGCACC...TTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR GCA 90 bp | AATGTATTTCTACAGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACGTAGTAGAGTTTTCCTaGAGGGGCGAGTTCCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: NVFLQCDYCAAEAGRCTDVVEFS*RGEFPF Trigger: AAAAGGGAACTCGCCCCTGCAGGAAAACTCTACTAC...GTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGTTACTTCCTGCTTCTGTCCCCTTCAATCCAGTACTGCTCCGTCTGCATGACCTGCCAATCAGCTaGAATTTTCTACTTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: WQLLPASVPFNPVLLRLHDLPIS*NFLLAP Trigger: AGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTC...ATGCAGACGGAGCAGTACTGGATTGAAGGGGACAGAAGCAGGAAGTAACTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTCTTACAGCGAATGTATTTCTACAGTGTGACTACTGTGCAGCCGAAGCTAGTGACGTCTCGCAGTaGCATCTCACTGTCTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: LFLTANVFLQCDYCAAEASDVSQ*HLTVSQ Trigger: CTGCGAGACAGTGAGATGTCACTGCGAGACGTCACT...AGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| 3UTR-3UTR GCA 90 bp | TATCAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGTCAGAGGGGAGACCTaGCAATCAGCTGGAATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: YQVSFQFPTRPNSVTQDQVRGET*QSAGIF Trigger: GAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGAC...TTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAAATAGTCACTTGCTCCAAGTGGTCTCTCACACAGCTCTTCAAATGTGCAGTTGTATTTCTACAGTGTaGCTACTGTGCAGCCGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: PNSHLLQVVSHTALQMCSCISTV*LLCSRS Trigger: GCTTCGGCTGCACAGTAGTCACACTGTAGAAATACA...ACTGCACATTTGAAGAGCTGTGTGAGAGACCACTTGGAGCAAGTGACTATTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGTATTTCTACAGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACTTCCAAATAGTCACTTaGTCCAAGTGGTCTCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: NVFLQCDYCAAEAGRCTDFQIVT*SKWSLT Trigger: TGTGAGAGACCACTTGGAGCAAGTGACTATTTGGAA...GTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGATTCTTTGTTTTAACCTaGACAGTAGGATGCCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: QVSFQFPTRPNSVTQDQGFFVLT*TVGCHL Trigger: CAAGTGGCATCCTACTGTTCAGGTTAAAACAAAGAA...TCCTTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCTGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTTTCTTTGTTTTAACCTaGACAGTAGGATGCCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: LSVRGETCQSAGIFYLLLFFVLT*TVGCHL Trigger: CAAGTGGCATCCTACTGTTCAGGTTAAAACAAAGAA...AAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGAGCGGAATGTTTCGTATaGTTACCGTATCAAAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: QVSFQFPTRPNSVTQDQGAECFV*LPYQNS Trigger: AGAATTTTGATACGGTAATCATACGAAACATTCCGC...TCCTTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGTATTTCTACAGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACTTTGCCAGTGAAAACTaGGGAATGTTTCGTATGATT | + |
|
Preference number: 2 (lower is better) Translates to: NVFLQCDYCAAEAGRCTDFASEN*GMFRMI Trigger: AATCATACGAAACATTCCGCAGTTTTCACTGGCAAA...GTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTATCAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCTAACCTGGATCTGCTaGTTAGACACGTGTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: IYQVSFQFPTRPNSVTQDLTWIC*LDTCSF Trigger: GAAAGAACACGTGTCTAACCAGCAGATCCAGGTTAG...ATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTGATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCCATCAGGATTCTGCTTTGGTCCGACTCACTGTCCTGATGCTGATGCAGAAAAAATCATTTTGTTTCTaGGCCAGCTCATCAAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: IHQDSALVRLTVLMLMQKKSFCF*ASSSNN Trigger: GTTGTTTGATGAGCTGGCTCAGAAACAAAATGATTT...TTTCTGCATCAGCATCAGGACAGTGAGTCGGACCAAAGCAGAATCCTGATGGAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCGTCCTCTTTGCCAGTGAAAACTGCGGAATGTTTCGTATGATTACCGTATCATTCCAAATAGTCACTTaGTCCAAGTGGTCTCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: CVLFASENCGMFRMITVSFQIVT*SKWSLT Trigger: TGTGAGAGACCACTTGGAGCAAGTGACTATTTGGAA...TGATACGGTAATCATACGAAACATTCCGCAGTTTTCACTGGCAAAGAGGACGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| 3UTR TCA 72 bp | TGTGGGCAGCACCATCCCATGGGCTGGGTCCCAGGCTaGGCAAAGAGAACACCACCGAGTCCAGCACTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CGQHHPMGWVPG*AKRTPPSPALP Trigger: AGGGAGTGCTGGACTCGGTGGTGTTCTCTTTGCTCAGCCTGGGACCCAGCCCATGGGATGGTGCTGCCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| 3UTR GCA 72 bp | GGATGGTCCATGCTCCTGTGGGTGTGGCTCTGGCTCTaGCTCCTCCAGCACTCGACCAATCAGGATCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GWSMLLWVWLWL*LLQHSTNQDPG Trigger: TCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCCACACCCACAGGAGCATGGACCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR CCA 72 bp | GCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTaGAACCTGCCCCATTTTGGCTGTCTGTCAGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALPPPALDQSGS*NLPHFGCLSEG Trigger: CCCCTCTGACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR GCA 72 bp | CTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTaGCCCATTTTGGCTGTCTGTCAGAGGGGAGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLQHSTNQDPGT*PILAVCQRGDL Trigger: CAGGTCTCCCCTCTGACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR TCA 72 bp | ACCCCAGAATCCAGCTGGAGCGTATCACAATATTCTTaGGTGTGGGCAGCACCATCCCATGGGCTGGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TPESSWSVSQYS*VWAAPSHGLGP Trigger: GGGACCCAGCCCATGGGATGGTGCTGCCCACACTCAAGAATATTGTGATACGCTCCAGCTGGATTCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCGTATCACAATATTCTaGAGTGTGGGCAGCACCATC | + |
|
Preference number: 3 (lower is better) Translates to: WLWLCLLQHSTNQDPGTCRITIF*SVGSTI Trigger: GATGGTGCTGCCCACACTCAAGAATATTGTGATACG...GCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| 3UTR TCA 72 bp | TCCGTCTGCATCTCTGTGAGCCGGGAAATGGTGCGCTaGAAGGCGAAGATTTCCTCCTCCCCCGTAAACATG | + |
|
Preference number: 3 (lower is better) Translates to: SVCISVSREMVR*KAKISSSPVNM Trigger: CATGTTTACGGGGGAGGAGGAAATCTTCGCCTTTCAGCGCACCATTTCCCGGCTCACAGAGATGCAGACGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| 3UTR GCA 72 bp | CTGGGAGGTGCACAGACATCCTGCATACTCTGCCTGTaGGTTCATGATTCAGACAGCGCACACATGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LGGAQTSCILCL*VHDSDSAHMSG Trigger: CCCTGACATGTGTGCGCTGTCTGAATCATGAACGCACAGGCAGAGTATGCAGGATGTCTGTGCACCTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR GCA 72 bp | ACTGTGCAGCCGAAGCTGGGAGGTGCACAGACATCCTaGATACTCTGCCTGTGCGTTCATGATTCAGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: TVQPKLGGAQTS*ILCLCVHDSDS Trigger: GCTGTCTGAATCATGAACGCACAGGCAGAGTATGCAGGATGTCTGTGCACCTCCCAGCTTCGGCTGCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR GCA 72 bp | CTACAGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTaGACAGACATCCTGCATACTCTGCCTGTGCGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LQCDYCAAEAGR*TDILHTLPVRS Trigger: TGAACGCACAGGCAGAGTATGCAGGATGTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR TCA 72 bp | CCCCTTCAATCCAGTACTGCTCCGTCTGCATCTCTGTaGGCCGGGAAATGGTGCGCTGAAAGGCGAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: PLQSSTAPSASL*AGKWCAERRRF Trigger: AAATCTTCGCCTTTCAGCGCACCATTTCCCGGCTCACAGAGATGCAGACGGAGCAGTACTGGATTGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| 3UTR CCA 72 bp | ATCACAATATTCTTGAGTGTGGGCAGCACCATCCCATaGGCTGGGTCCCAGGCTGAGCAAAGAGAACACCAC | + |
|
Preference number: 3 (lower is better) Translates to: ITIFLSVGSTIP*AGSQAEQREHH Trigger: GTGGTGTTCTCTTTGCTCAGCCTGGGACCCAGCCCATGGGATGGTGCTGCCCACACTCAAGAATATTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTGATGCTGATGCAGAAACAAGCTTGAGATCGGAGCTGAAGCGGAGCAGACCGCAGCTCTCTGCCTaGCACTTTCAGAATCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CPDADAETSLRSELKRSRPQLSA*HFQNPW Trigger: CCAAGGATTCTGAAAGTGCAAGGCAGAGAGCTGCGG...TCTGCTCCGCTTCAGCTCCGATCTCAAGCTTGTTTCTGCATCAGCATCAGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| 3UTR GCA 72 bp | AGTCCTGGCTCAGCCCCAAATCATCCATCAGGATTCTaGTTTGGTCCGACTCACTGTCCTGATGCTGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPGSAPNHPSGF*FGPTHCPDADA Trigger: TGCATCAGCATCAGGACAGTGAGTCGGACCAAAGCAGAATCCTGATGGATGATTTGGGGCTGAGCCAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| 3UTR GCA 72 bp | ACAAAGGAGACAGAATTCTTCAGTGTGTCCATCCACTaGCACAGACGCAGCAGTCCAGAGGGCAAAGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TKETEFFSVSIH*HRRSSPEGKVH Trigger: ATGCACTTTGCCCTCTGGACTGCTGCGTCTGTGGCAGTGGATGGACACACTGAAGAATTCTGTCTCCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR GCA 72 bp | TGGCTTTATAACCTATGTCCTCATGGGCTCAGGCACTaGCTGCTAACCTGGATCTGCTGGTTAGACACGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WLYNLCPHGLRH*LLTWICWLDTC Trigger: ACACGTGTCTAACCAGCAGATCCAGGTTAGCAGGCAGTGCCTGAGCCCATGAGGACATAGGTTATAAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR GCA 72 bp | TTGCTCCAAGTGGTCTCTCACACAGCTCTTCAAATGTaGAGTCGGCAACGCTTCCACAGGCTTTATTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLQVVSHTALQM*SRQRFHRLYSA Trigger: GGCTGAATAAAGCCTGTGGAAGCGTTGCCGACTGCACATTTGAAGAGCTGTGTGAGAGACCACTTGGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| 3UTR TCA 72 bp | CCACTTGTTTCTTACAGCGAATGTATTTCTACAGTGTaGCTACTGTGCAGCCGAAGCTGGGAGGTGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: PLVSYSECISTV*LLCSRSWEVHR Trigger: TCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR CCA 72 bp | TTGGCTGTCTGTCAGAGGGGAGACCTGCCAATCAGCTaGAATTTTCTACTTGCTCCTTACCTGATGGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LAVCQRGDLPIS*NFLLAPYLMAL Trigger: TAAAGCCATCAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACAGACAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR GCA 72 bp | GAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTaGTCCTTACCTGATGGCTTTATAACCTATGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: EGRPANQLEFST*SLPDGFITYVL Trigger: GAGGACATAGGTTATAAAGCCATCAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR TCA 72 bp | TGCCAATCAGCTGGAATTTTCTACTTGCTCCTTACCTaGTGGCTTTATAACCTATGTCCTCATGGGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CQSAGIFYLLLT*WLYNLCPHGLR Trigger: CCTGAGCCCATGAGGACATAGGTTATAAAGCCATCAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR GCA 72 bp | CTTCCACAGGCTTTATTCAGCCGCAGCTCTCTGCCTTaGACTTTCAGAATCCTTGGGCTAGTTAAATCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LPQALFSRSSLP*TFRILGLVKSF Trigger: AAATGATTTAACTAGCCCAAGGATTCTGAAAGTGCAAGGCAGAGAGCTGCGGCTGAATAAAGCCTGTGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| 3UTR TCA 72 bp | AGTGATGAATCTTCTCGCTTGCGTCCTCTTTGCCAGTaGAAACTGCGGAATGTTTCGTATGATTACCGTATC | + |
|
Preference number: 3 (lower is better) Translates to: SDESSRLRPLCQ*KLRNVSYDYRI Trigger: GATACGGTAATCATACGAAACATTCCGCAGTTTTCACTGGCAAAGAGGACGCAAGCGAGAAGATTCATCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| 3UTR TCA 72 bp | TTCAGAATCCTTGGGCTAGTTAAATCATTTTGTTTCTaGGCCAGCTCATCAAACAACTTATCCACGACGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FRILGLVKSFCF*ASSSNNLSTTA Trigger: GGCCGTCGTGGATAAGTTGTTTGATGAGCTGGCTCAGAAACAAAATGATTTAACTAGCCCAAGGATTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| 3UTR TCA 72 bp | TCCTCTTTGCCAGTGAAAACTGCGGAATGTTTCGTATaGTTACCGTATCAAAATTCTTTGATAATTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSLPVKTAECFV*LPYQNSLIIPN Trigger: ATTTGGAATTATCAAAGAATTTTGATACGGTAATCATACGAAACATTCCGCAGTTTTCACTGGCAAAGAGGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCTCCCAGTCAGCCGGCTaGGCGCGGCGGAGCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWLCLLQHSTNQDPGTCPSQSAG*ARRSAE Trigger: CTCTGCGCTCCGCCGCGCGCAGCCGGCTGACTGGGA...GGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTCATGGAGAGCCCGGCTaGGTCCTGGCTCAGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQHSTNQDPGTCPILAVCHGEPG*VLAQPQ Trigger: TTGGGGCTGAGCCAGGACTCAGCCGGGCTCTCCATG...ACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCTTCCGGTGGTCTGTTaGATGTTGCCACAACGACGA | + |
|
Preference number: 4 (lower is better) Translates to: GSGSASSSTRPIRILEPALPVVC*MLPQRR Trigger: TCGTCGTTGTGGCAACATCCAACAGACCACCGGAAG...GGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCTCCTCCCTCAGCTCCTaGGATTTGATCAGAAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSGSASSSTRPIRILEPASSLSS*DLIRKS Trigger: CGACTTTCTGATCAAATCTCAGGAGCTGAGGGAGGA...GGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCGCAGCTCTCTGCCTTaGACTTTCAGAATCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLWLCLLQHSTNQDPGTCRSSLP*TFRILG Trigger: CCCAAGGATTCTGAAAGTGCAAGGCAGAGAGCTGCG...GCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCTCCAGCATGAAGCCGTaGAAATGGACCCGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WLWLCLLQHSTNQDPGTCSSMKP*KWTRFF Trigger: AAAGAAGCGGGTCCATTTTCACGGCTTCATGCTGGA...GCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCGTCCTCTTTGCCAGTaGAAACTGCGGAATGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: WLWLCLLQHSTNQDPGTCRPLCQ*KLRNVS Trigger: CGAAACATTCCGCAGTTTTCACTGGCAAAGAGGACG...GCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR GCA 90 bp | GCCATTCCTAACCAACTAACTGACAGGAATACAGAGGCCAACGTAAAGTGCTTTTCCCAGTCAGCCGGCTaGGCGCGGCGGAGCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AIPNQLTDRNTEANVKCFSQSAG*ARRSAE Trigger: CTCTGCGCTCCGCCGCGCGCAGCCGGCTGACTGGGA...AAAGCACTTTACGTTGGCCTCTGTATTCCTGTCAGTTAGTTGGTTAGGAATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTGCATCTCTGTGAGCCGGGAAATGGTGCGCTGAAAGGCGAAGATTTCCTCTGGTCCAGAGGCCCGTaGCAAACAGCCAAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLHLCEPGNGALKGEDFLWSRGP*QTAKAF Trigger: GAAAGCCTTGGCTGTTTGCCACGGGCCTCTGGACCA...GAGGAAATCTTCGCCTTTCAGCGCACCATTTCCCGGCTCACAGAGATGCAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTCGGCAACGCTTCCACAGGCTTTATTCAGCCGCAGCTCTCTGCCTTGCACAGCTATCGGGTCATATaGCTTAGCCATGAATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AVGNASTGFIQPQLSALHSYRVI*LSHESR Trigger: GCGGGATTCATGGCTAAGTCATATGACCCGATAGCT...GTGCAAGGCAGAGAGCTGCGGCTGAATAAAGCCTGTGGAAGCGTTGCCGACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCCAGGACAGCTATAAATaGCACAAAGTTAGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWLCLLQHSTNQDPGTCPQDSYK*HKVSPL Trigger: CAGAGGGCTAACTTTGTGCCATTTATAGCTGTCCTG...GGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATAACCTATGTCCTCATGGGCTCAGGCACTGCCTGCTAACCTGGATCTGCAGCCCGGCTGAGTCCTaGCTCAGCCCCAAATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LYNLCPHGLRHCLLTWICSPAES*LSPKSS Trigger: GGATGATTTGGGGCTGAGCCAGGACTCAGCCGGGCT...GCAGATCCAGGTTAGCAGGCAGTGCCTGAGCCCATGAGGACATAGGTTATAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTCTGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTAGCCCGGCTGAGTCCTaGCTCAGCCCCAAATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AVCQRGDLPISWNFLLAPSPAES*LSPKSS Trigger: GGATGATTTGGGGCTGAGCCAGGACTCAGCCGGGCT...AGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACAGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| 3UTR CAA 72 bp | TACCCCAGAATCCAGCTGGAGCGTATCACAATATTCTaGAGTGTGGGCAGCACCATCCCATGGGCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YPRIQLERITIF*SVGSTIPWAGS Trigger: GGACCCAGCCCATGGGATGGTGCTGCCCACACTCAAGAATATTGTGATACGCTCCAGCTGGATTCTGGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCAGGAGAGAAGTTTCTTaGCTGATTTCCTCGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: WLWLCLLQHSTNQDPGTCRREVS*LISSAM Trigger: CATAGCCGAGGAAATCAGTCAAGAAACTTCTCTCCT...GCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | AATGTATTTCTACAGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACCCGTCTGCATCTCTGTaGGCCGGGAAATGGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NVFLQCDYCAAEAGRCTDPSASL*AGKWCA Trigger: AGCGCACCATTTCCCGGCTCACAGAGATGCAGACGG...GTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACATCCTGCATACTCTGGTCTGTTGGATGTTaGCACAACGACGACCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVTTVQPKLGGAQTSCILWSVGC*HNDDPV Trigger: AACGGGGTCGTCGTTGTGGCAACATCCAACAGACCA...GAGTATGCAGGATGTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTAGCTATCGGGTCATATaGCTTAGCCATGAATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LQHSTNQDPGTCPILAVCSYRVI*LSHESR Trigger: GCGGGATTCATGGCTAAGTCATATGACCCGATAGCT...ACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCATGGGCTGGGTCCCAGGCTGAGCAAAGAGAACACCACCGAGTCCAGCACGCGATGTCAGTGACCTaGAATTCATCAAAACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPWAGSQAEQREHHRVQHAMSVT*NSSKHR Trigger: CCTATGTTTTGATGAATTTCAGGTCACTGACATCGC...GTGCTGGACTCGGTGGTGTTCTCTTTGCTCAGCCTGGGACCCAGCCCATGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTTGTGCACGTCCAGCATaGAGCCGTGAAAATGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVRGETCQSAGIFYLLLCARPA*SRENGP Trigger: GGGTCCATTTTCACGGCTTCATGCTGGACGTGCACA...AAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | CTCCAAGTGGTCTCTCACACAGCTCTTCAAATGTGCAGTCGGCAACGCTTCCACAGCTATCGGGTCATATaGCTTAGCCATGAATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVVSHTALQMCSRQRFHSYRVI*LSHESR Trigger: GCGGGATTCATGGCTAAGTCATATGACCCGATAGCT...GTGGAAGCGTTGCCGACTGCACATTTGAAGAGCTGTGTGAGAGACCACTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| CDS-3UTR TCA 90 bp | GGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCAAATCATTTTGTTTCTaGGCCAGCTCATCAAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSGSASSSTRPIRILEPAKSFCF*ASSSNN Trigger: GTTGTTTGATGAGCTGGCTCAGAAACAAAATGATTT...GGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTCTTACAGCGAATGTATTTCTACAGTGTGACTACTGTGCAGCCGAAGCTCATGGAGAGCCCGGCTaGGTCCTGGCTCAGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFLTANVFLQCDYCAAEAHGEPG*VLAQPQ Trigger: TTGGGGCTGAGCCAGGACTCAGCCGGGCTCTCCATG...AGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTCGGGAAATGGTGCGCTaGAAGGCGAAGATTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVRGETCQSAGIFYLLLREMVR*KAKISS Trigger: GGAGGAAATCTTCGCCTTTCAGCGCACCATTTCCCG...AAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGACGGGAAATGGTGCGCTaGAAGGCGAAGATTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVSFQFPTRPNSVTQDQGREMVR*KAKISS Trigger: GGAGGAAATCTTCGCCTTTCAGCGCACCATTTCCCG...TCCTTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCTTCGTTTCCACATATaGATAAAACATGTCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSGSASSSTRPIRILEPALRFHI*IKHVHH Trigger: GTGATGGACATGTTTTATGCATATGTGGAAACGAAG...GGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR GCA 90 bp | AGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTCAGAACAGCTCTTCAAATGTaGAGTCGGCAACGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: STRPIRILEPAPFWLSVRTALQM*SRQRFH Trigger: GTGGAAGCGTTGCCGACTGCACATTTGAAGAGCTGT...TCTGACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCTGATGCTGATGCAGAAACAAGCTTGAGATCGGAGCTGAAGCGGAGCAGACTTCCGGTGGTCTGTTaGATGTTGCCACAACGACGA | + |
|
Preference number: 4 (lower is better) Translates to: CPDADAETSLRSELKRSRLPVVC*MLPQRR Trigger: TCGTCGTTGTGGCAACATCCAACAGACCACCGGAAG...TCTGCTCCGCTTCAGCTCCGATCTCAAGCTTGTTTCTGCATCAGCATCAGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| CDS-3UTR TCA 90 bp | CTTTATAACCTATGTCCTCATGGGCTCAGGCACTGCCTGCTAACCTGGATCTGCAGCTATCGGGTCATATaGCTTAGCCATGAATCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LYNLCPHGLRHCLLTWICSYRVI*LSHESR Trigger: GCGGGATTCATGGCTAAGTCATATGACCCGATAGCT...GCAGATCCAGGTTAGCAGGCAGTGCCTGAGCCCATGAGGACATAGGTTATAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAATTCTTCAGTGTGTCCATCCACTGCCACAGACGCAGCAGTCCAGAGGGAGGAGAGAAGTTTCTTaGCTGATTTCCTCGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: DRILQCVHPLPQTQQSRGRREVS*LISSAM Trigger: CATAGCCGAGGAAATCAGTCAAGAAACTTCTCTCCT...CCCTCTGGACTGCTGCGTCTGTGGCAGTGGATGGACACACTGAAGAATTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | TGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTACCTGCTTCCGGTGGTCTGTTaGATGTTGCCACAACGACGA | + |
|
Preference number: 4 (lower is better) Translates to: CQRGDLPISWNFLLAPYLLPVVC*MLPQRR Trigger: TCGTCGTTGTGGCAACATCCAACAGACCACCGGAAG...CAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| 3UTR CAA 72 bp | CTGGCTCAGCCCCAAATCATCCATCAGGATTCTGCTTaGGTCCGACTCACTGTCCTGATGCTGATGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAQPQIIHQDSA*VRLTVLMLMQK Trigger: TTTCTGCATCAGCATCAGGACAGTGAGTCGGACCAAAGCAGAATCCTGATGGATGATTTGGGGCTGAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| CDS-3UTR TCA 90 bp | TGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTACCTGTCCTCCCTCAGCTCCTaGGATTTGATCAGAAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CQRGDLPISWNFLLAPYLSSLSS*DLIRKS Trigger: CGACTTTCTGATCAAATCTCAGGAGCTGAGGGAGGA...CAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGATCCAGCATGAAGCCGTaGAAATGGACCCGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVSFQFPTRPNSVTQDQGSSMKP*KWTRFF Trigger: AAAGAAGCGGGTCCATTTTCACGGCTTCATGCTGGA...TCCTTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACATCCTGCATACTCGCGATGTCAGTGACCTaGAATTCATCAAAACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVTTVQPKLGGAQTSCILAMSVT*NSSKHR Trigger: CCTATGTTTTGATGAATTTCAGGTCACTGACATCGC...GAGTATGCAGGATGTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGAACAGCTCTTCAAATGTaGAGTCGGCAACGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVSFQFPTRPNSVTQDQGTALQM*SRQRFH Trigger: GTGGAAGCGTTGCCGACTGCACATTTGAAGAGCTGT...TCCTTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | AGTGACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTTGGTCCAGAGGCCCGTaGCAAACAGCCAAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDISLSRSPNQSPFPFNLWSRGP*QTAKAF Trigger: GAAAGCCTTGGCTGTTTGCCACGGGCCTCTGGACCA...AAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTAAACTCTGTTTAAGGTaGTGTATCCTTCTGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LQHSTNQDPGTCPILAVCKLCLR*CILLCT Trigger: CGTGCACAGAAGGATACACCACCTTAAACAGAGTTT...ACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | AGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTCAGACAGGACAGCTATAAATaGCACAAAGTTAGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STRPIRILEPAPFWLSVRQDSYK*HKVSPL Trigger: CAGAGGGCTAACTTTGTGCCATTTATAGCTGTCCTG...TCTGACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | ATCCATCAGGATTCTGCTTTGGTCCGACTCACTGTCCTGATGCTGATGCAGAAATCCAGCATGAAGCCGTaGAAATGGACCCGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IHQDSALVRLTVLMLMQKSSMKP*KWTRFF Trigger: AAAGAAGCGGGTCCATTTTCACGGCTTCATGCTGGA...TTTCTGCATCAGCATCAGGACAGTGAGTCGGACCAAAGCAGAATCCTGATGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTAGGATGCCACTTGTTTCTTACAGCGAATGTATTTCTACAGTGTGACTACCCGTCTGCATCTCTGTaGGCCGGGAAATGGTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVGCHLFLTANVFLQCDYPSASL*AGKWCA Trigger: AGCGCACCATTTCCCGGCTCACAGAGATGCAGACGG...GTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAAGTGGCATCCTACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | ACTTGCTCCAAGTGGTCTCTCACACAGCTCTTCAAATGTGCAGTCGGCAACGCTTCCCGCCTTCCTTTTTaGCAAACTCTGTTTAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCSKWSLTQLFKCAVGNASRLPF*QTLFKV Trigger: CACCTTAAACAGAGTTTGCCAAAAAGGAAGGCGGGA...AGCGTTGCCGACTGCACATTTGAAGAGCTGTGTGAGAGACCACTTGGAGCAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTTACTTCCTGCTTCTGTCCCCTTCAATCCAGTACTGCTCCGTCTGCATCAGGACAGCTATAAATaGCACAAAGTTAGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQLLPASVPFNPVLLRLHQDSYK*HKVSPL Trigger: CAGAGGGCTAACTTTGTGCCATTTATAGCTGTCCTG...ATGCAGACGGAGCAGTACTGGATTGAAGGGGACAGAAGCAGGAAGTAACTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTCTTACAGCGAATGTATTTCTACAGTGTGACTACTGTGCAGCCGAAGCTTGTGCACGTCCAGCATaGAGCCGTGAAAATGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLTANVFLQCDYCAAEACARPA*SRENGP Trigger: GGGTCCATTTTCACGGCTTCATGCTGGACGTGCACA...AGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTCTGAGCCAGCTCATCAAACAACTTATCCACGACGGCCTCCACATCAGCAGGAGAGAAGTTTCTTaGCTGATTTCCTCGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: LFLSQLIKQLIHDGLHISRREVS*LISSAM Trigger: CATAGCCGAGGAAATCAGTCAAGAAACTTCTCTCCT...GCTGATGTGGAGGCCGTCGTGGATAAGTTGTTTGATGAGCTGGCTCAGAAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| CDS-3UTR TCA 90 bp | ACTCACTGTCCTGATGCTGATGCAGAAACAAGCTTGAGATCGGAGCTGAAGCGGGCGATGTCAGTGACCTaGAATTCATCAAAACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: THCPDADAETSLRSELKRAMSVT*NSSKHR Trigger: CCTATGTTTTGATGAATTTCAGGTCACTGACATCGC...CCGCTTCAGCTCCGATCTCAAGCTTGTTTCTGCATCAGCATCAGGACAGTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| CDS-3UTR TCA 90 bp | GACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTGTCCGTCCTCTTTGCCAGTaGAAACTGCGGAATGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DISLSRSPNQSPFPFNLVRPLCQ*KLRNVS Trigger: CGAAACATTCCGCAGTTTTCACTGGCAAAGAGGACG...GACAAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTTTTGCCAGTGAAAACTaGGGAATGTTTCGTATGATT | + |
|
Preference number: 4 (lower is better) Translates to: LQHSTNQDPGTCPILAVCFASEN*GMFRMI Trigger: AATCATACGAAACATTCCGCAGTTTTCACTGGCAAA...ACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | AGTGACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTCTTCCGGTGGTCTGTTaGATGTTGCCACAACGACGA | + |
|
Preference number: 4 (lower is better) Translates to: SDISLSRSPNQSPFPFNLLPVVC*MLPQRR Trigger: TCGTCGTTGTGGCAACATCCAACAGACCACCGGAAG...AAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTAGGATGCCACTTGTTTCTTACAGCGAATGTATTTCTACAGTGTGACTACTGTGCACGTCCAGCATaGAGCCGTGAAAATGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: TVGCHLFLTANVFLQCDYCARPA*SRENGP Trigger: GGGTCCATTTTCACGGCTTCATGCTGGACGTGCACA...GTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAAGTGGCATCCTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR GCA 90 bp | TATCAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGTAGTAGAGTTTTCCTaGAGGGGCGAGTTCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YQVSFQFPTRPNSVTQDQVVEFS*RGEFPF Trigger: AAAAGGGAACTCGCCCCTGCAGGAAAACTCTACTAC...TTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | ATCCATCAGGATTCTGCTTTGGTCCGACTCACTGTCCTGATGCTGATGCAGAAATCCCGCCTTCCTTTTTaGCAAACTCTGTTTAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IHQDSALVRLTVLMLMQKSRLPF*QTLFKV Trigger: CACCTTAAACAGAGTTTGCCAAAAAGGAAGGCGGGA...TTTCTGCATCAGCATCAGGACAGTGAGTCGGACCAAAGCAGAATCCTGATGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
||
| CDS-3UTR CCA 90 bp | GACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTGTCATAGAGATCTTCCGGTaGTCTGTTGGATGTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DISLSRSPNQSPFPFNLVIEIFR*SVGCCH Trigger: GTGGCAACATCCAACAGACCACCGGAAGATCTCTAT...GACAAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR GCA 90 bp | GCCATTCCTAACCAACTAACTGACAGGAATACAGAGGCCAACGTAAAGTGCTTTGTAGTAGAGTTTTCCTaGAGGGGCGAGTTCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AIPNQLTDRNTEANVKCFVVEFS*RGEFPF Trigger: AAAAGGGAACTCGCCCCTGCAGGAAAACTCTACTAC...AAAGCACTTTACGTTGGCCTCTGTATTCCTGTCAGTTAGTTGGTTAGGAATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | TATCAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAATCCCGCCTTCCTTTTTaGCAAACTCTGTTTAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YQVSFQFPTRPNSVTQDQSRLPF*QTLFKV Trigger: CACCTTAAACAGAGTTTGCCAAAAAGGAAGGCGGGA...TTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | AGTGACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTATAGAGATCTTCCGGTaGTCTGTTGGATGTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SDISLSRSPNQSPFPFNLIEIFR*SVGCCH Trigger: GTGGCAACATCCAACAGACCACCGGAAGATCTCTAT...AAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | GAATACAGAGGCCAACGTAAAGTGCTTTTCCCTTCAGTTATGTTCAGAAGGCTTGTCACTTGCTCCAAGTaGTCTCTCACACAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EYRGQRKVLFPSVMFRRLVTCSK*SLTQLF Trigger: GAAGAGCTGTGTGAGAGACCACTTGGAGCAAGTGAC...AAGCCTTCTGAACATAACTGAAGGGAAAAGCACTTTACGTTGGCCTCTGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | AGTGACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTAGGAGAGAAGTTTCTTaGCTGATTTCCTCGGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SDISLSRSPNQSPFPFNLRREVS*LISSAM Trigger: CATAGCCGAGGAAATCAGTCAAGAAACTTCTCTCCT...AAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGAAAATCATTTTGTTTCTaGGCCAGCTCATCAAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVSFQFPTRPNSVTQDQGKSFCF*ASSSNN Trigger: GTTGTTTGATGAGCTGGCTCAGAAACAAAATGATTT...TCCTTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | GCCATTCCTAACCAACTAACTGACAGGAATACAGAGGCCAACGTAAAGTGCTTTTCCCGCCTTCCTTTTTaGCAAACTCTGTTTAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AIPNQLTDRNTEANVKCFSRLPF*QTLFKV Trigger: CACCTTAAACAGAGTTTGCCAAAAAGGAAGGCGGGA...AAAGCACTTTACGTTGGCCTCTGTATTCCTGTCAGTTAGTTGGTTAGGAATGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCTTACAGCGAATGTATTTCTACAGTGTGACTACTGTGCAGCCGAAGCTATAGAGATCTTCCGGTaGTCTGTTGGATGTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFLTANVFLQCDYCAAEAIEIFR*SVGCCH Trigger: GTGGCAACATCCAACAGACCACCGGAAGATCTCTAT...AGCTTCGGCTGCACAGTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTAGGATGCCACTTGTTTCTTACAGCGAATGTATTTCTACAGTGTGACTACGTCACTTGCTCCAAGTaGTCTCTCACACAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVGCHLFLTANVFLQCDYVTCSK*SLTQLF Trigger: GAAGAGCTGTGTGAGAGACCACTTGGAGCAAGTGAC...GTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAAGTGGCATCCTACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | AGTGACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTAAACTCTGTTTAAGGTaGTGTATCCTTCTGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SDISLSRSPNQSPFPFNLKLCLR*CILLCT Trigger: CGTGCACAGAAGGATACACCACCTTAAACAGAGTTT...AAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR GCA 90 bp | TATCAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAACTTCGTTTCCACATATaGATAAAACATGTCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: YQVSFQFPTRPNSVTQDQLRFHI*IKHVHH Trigger: GTGATGGACATGTTTTATGCATATGTGGAAACGAAG...TTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR GCA 90 bp | GAATACAGAGGCCAACGTAAAGTGCTTTTCCCTTCAGTTATGTTCAGAAGGCTTTTCCAAATAGTCACTTaGTCCAAGTGGTCTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: EYRGQRKVLFPSVMFRRLFQIVT*SKWSLT Trigger: TGTGAGAGACCACTTGGAGCAAGTGACTATTTGGAA...AAGCCTTCTGAACATAACTGAAGGGAAAAGCACTTTACGTTGGCCTCTGTATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTAGGATGCCACTTGTTTCTTACAGCGAATGTATTTCTACAGTGTGACTACGCGATGTCAGTGACCTaGAATTCATCAAAACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVGCHLFLTANVFLQCDYAMSVT*NSSKHR Trigger: CCTATGTTTTGATGAATTTCAGGTCACTGACATCGC...GTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAAGTGGCATCCTACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | AGTGACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTGCGGAATGTTTCGTATaGTTACCGTATCAAAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDISLSRSPNQSPFPFNLAECFV*LPYQNS Trigger: AGAATTTTGATACGGTAATCATACGAAACATTCCGC...AAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
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| CDS-3UTR GCA 90 bp | ACAGTAGGATGCCACTTGTTTCTTACAGCGAATGTATTTCTACAGTGTGACTACTTCCAAATAGTCACTTaGTCCAAGTGGTCTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TVGCHLFLTANVFLQCDYFQIVT*SKWSLT Trigger: TGTGAGAGACCACTTGGAGCAAGTGACTATTTGGAA...GTAGTCACACTGTAGAAATACATTCGCTGTAAGAAACAAGTGGCATCCTACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR TCA 90 bp | GAATACAGAGGCCAACGTAAAGTGCTTTTCCCTTCAGTTATGTTCAGAAGGCTTGCGGAATGTTTCGTATaGTTACCGTATCAAAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: EYRGQRKVLFPSVMFRRLAECFV*LPYQNS Trigger: AGAATTTTGATACGGTAATCATACGAAACATTCCGC...AAGCCTTCTGAACATAACTGAAGGGAAAAGCACTTTACGTTGGCCTCTGTATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGAAAACTGCGGAATGTTTCGTATGATTACCGTATCAAAATTCTTTGATAAACTCTGTTTAAGGTaGTGTATCCTTCTGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: ASENCGMFRMITVSKFFDKLCLR*CILLCT Trigger: CGTGCACAGAAGGATACACCACCTTAAACAGAGTTT...ATCAAAGAATTTTGATACGGTAATCATACGAAACATTCCGCAGTTTTCACTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTCTGGCTCTGCCTCCTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCGTGGTCTGTTGGATGTaGCCACAACGACGACCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: WLWLCLLQHSTNQDPGTCVVCWM*PQRRPR Trigger: ACGGGGTCGTCGTTGTGGCAACATCCAACAGACCAC...GCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAGGAGGCAGAGCCAGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS CCA 90 bp | GTGGCAAACAGCCAAGGCTTTCAAACGGGCCTCAGAAGCGGCTGTTaGGCGTACACCCTCGGATGTCTGGACTGTGTAGGCTTTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: VANSQGFQTGLRSGC*AYTLGCLDCVGFPQ Trigger: CTGTGGAAAGCCTACACAGTCCAGACATCCGAGGGTGTACGCCCAACAGCCGCTTCTGAGGCCCGTTTGAAAGCCTTGGCTGTTTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
||
| CDS-3UTR CAA 90 bp | TGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTACCTGCCTCAGAAGCGGCTGTaGGGCGTACACCCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: CQRGDLPISWNFLLAPYLPQKRL*GVHPRM Trigger: CATCCGAGGGTGTACGCCCAACAGCCGCTTCTGAGG...CAGGTAAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
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| CDS-3UTR CAA 90 bp | CTCTCACACAGCTCTTCAAATGTGCAGTCGGCAACGCTTCCACAGGCTTTATTCCCTCAGAAGCGGCTGTaGGGCGTACACCCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSHSSSNVQSATLPQALFPQKRL*GVHPRM Trigger: CATCCGAGGGTGTACGCCCAACAGCCGCTTCTGAGG...GAATAAAGCCTGTGGAAGCGTTGCCGACTGCACATTTGAAGAGCTGTGTGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAGCACTCGACCAATCAGGATCCTGGAACCTGCCCCATTTTGGCTGTCTGTTCTTCCGGTGGTCTGTaGGATGTTGCCACAACGACG | + |
|
Preference number: 5 (lower is better) Translates to: LQHSTNQDPGTCPILAVCSSGGL*DVATTT Trigger: CGTCGTTGTGGCAACATCCAACAGACCACCGGAAGA...ACAGACAGCCAAAATGGGGCAGGTTCCAGGATCCTGATTGGTCGAGTGCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| CDS-3UTR CAA 90 bp | CTGTCTGTCAGAGGGGAGACCTGCCAATCAGCTGGAATTTTCTACTTGCTCCTTGTGGTCTGTTGGATGTaGCCACAACGACGACCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSVRGETCQSAGIFYLLLVVCWM*PQRRPR Trigger: ACGGGGTCGTCGTTGTGGCAACATCCAACAGACCAC...AAGGAGCAAGTAGAAAATTCCAGCTGATTGGCAGGTCTCCCCTCTGACAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| CDS-3UTR CAA 90 bp | GTCTCTCACACAGCTCTTCAAATGTGCAGTCGGCAACGCTTCCACAGGCTTTATGTGGTCTGTTGGATGTaGCCACAACGACGACCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VSHTALQMCSRQRFHRLYVVCWM*PQRRPR Trigger: ACGGGGTCGTCGTTGTGGCAACATCCAACAGACCAC...ATAAAGCCTGTGGAAGCGTTGCCGACTGCACATTTGAAGAGCTGTGTGAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
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| CDS-3UTR CAA 90 bp | CAACTTATCCACGACGGCCTCCACATCAGCCTCACTTGTGAGGTAGTAGAGTTTGTGGTCTGTTGGATGTaGCCACAACGACGACCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: QLIHDGLHISLTCEVVEFVVCWM*PQRRPR Trigger: ACGGGGTCGTCGTTGTGGCAACATCCAACAGACCAC...AAACTCTACTACCTCACAAGTGAGGCTGATGTGGAGGCCGTCGTGGATAAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133326.8 ENSMUST00000149832.2 |
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| CDS-3UTR CAA 90 bp | CTTTATAACCTATGTCCTCATGGGCTCAGGCACTGCCTGCTAACCTGGATCTGCTCTTCCGGTGGTCTGTaGGATGTTGCCACAACGACG | + |
|
Preference number: 5 (lower is better) Translates to: LYNLCPHGLRHCLLTWICSSGGL*DVATTT Trigger: CGTCGTTGTGGCAACATCCAACAGACCACCGGAAGA...GCAGATCCAGGTTAGCAGGCAGTGCCTGAGCCCATGAGGACATAGGTTATAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| CDS-3UTR CAA 90 bp | TTGTTTCTGAGCCAGCTCATCAAACAACTTATCCACGACGGCCTCCACATCAGCCCTTCCGGTGGTCTGTaGGATGTTGCCACAACGACG | + |
|
Preference number: 5 (lower is better) Translates to: LFLSQLIKQLIHDGLHISPSGGL*DVATTT Trigger: CGTCGTTGTGGCAACATCCAACAGACCACCGGAAGG...GCTGATGTGGAGGCCGTCGTGGATAAGTTGTTTGATGAGCTGGCTCAGAAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149832.2 |
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| CDS-3UTR CAA 90 bp | AGTGTGACTACTGTGCAGCCGAAGCTGGGAGGTGCACAGACATCCTGCATACTCCTGAACGACTCTTCTTaGATGTTCATCCTCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVTTVQPKLGGAQTSCILLNDSS*MFILPQ Trigger: CTGAGGGAGGATGAACATCAAAGAAGAGTCGTTCAG...GAGTATGCAGGATGTCTGTGCACCTCCCAGCTTCGGCTGCACAGTAGTCACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
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| CDS-3UTR CAA 90 bp | GACAGAATTCTTCAGTGTGTCCATCCACTGCCACAGACGCAGCAGTCCAGAGGGCTGAACGACTCTTCTTaGATGTTCATCCTCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DRILQCVHPLPQTQQSRGLNDSS*MFILPQ Trigger: CTGAGGGAGGATGAACATCAAAGAAGAGTCGTTCAG...CCCTCTGGACTGCTGCGTCTGTGGCAGTGGATGGACACACTGAAGAATTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
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| CDS-3UTR CAA 90 bp | CAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGATCTTCCGGTGGTCTGTaGGATGTTGCCACAACGACG | + |
|
Preference number: 5 (lower is better) Translates to: QVSFQFPTRPNSVTQDQGSSGGL*DVATTT Trigger: CGTCGTTGTGGCAACATCCAACAGACCACCGGAAGA...TCCTTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGATCGCTTGCGTCCTCTTaGCCAGTGAAAACTGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QVSFQFPTRPNSVTQDQGSLASS*PVKTAE Trigger: TTCCGCAGTTTTCACTGGCAAAGAGGACGCAAGCGA...TCCTTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CAA 90 bp | ATTTATCAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCCGCAGCTCTCTGCCTaGCACTTTCAGAATCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IYQVSFQFPTRPNSVTQDPQLSA*HFQNPW Trigger: CCAAGGATTCTGAAAGTGCAAGGCAGAGAGCTGCGG...ATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTGATAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CAA 90 bp | AGTGACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTCCGCAGCTCTCTGCCTaGCACTTTCAGAATCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SDISLSRSPNQSPFPFNLPQLSA*HFQNPW Trigger: CCAAGGATTCTGAAAGTGCAAGGCAGAGAGCTGCGG...AAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CAA 90 bp | GCCATTCCTAACCAACTAACTGACAGGAATACAGAGGCCAACGTAAAGTGCTTTTCGCTTGCGTCCTCTTaGCCAGTGAAAACTGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AIPNQLTDRNTEANVKCFSLASS*PVKTAE Trigger: TTCCGCAGTTTTCACTGGCAAAGAGGACGCAAGCGA...AAAGCACTTTACGTTGGCCTCTGTATTCCTGTCAGTTAGTTGGTTAGGAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTCCTTCCAGTTTCCTACAAGGCCCAACTCTGTGACTCAGGATCAAGGAAAACATAGAGGCCCTTaGGAGGTTTGTTCCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QVSFQFPTRPNSVTQDQGKHRGP*EVCSLK Trigger: TTTCAAGGAACAAACCTCCAAAGGGCCTCTATGTTT...TCCTTGATCCTGAGTCACAGAGTTGGGCCTTGTAGGAAACTGGAAGGACACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
||
| CDS TCA 90 bp | AGTTTCTTGACTGATTTCCTCGGCTATGGGAGCTATCGGGTCATATaGCTTAGCCATGAATCCCGCCTTCCTTTTTGGCAAACTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFLTDFLGYGSYRVI*LSHESRLPFWQTLF Trigger: AAACAGAGTTTGCCAAAAAGGAAGGCGGGATTCATGGCTAAGTCATATGACCCGATAGCTCCCATAGCCGAGGAAATCAGTCAAGAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000149832.2 ENSMUST00000151747.8 |
||
| CDS CCA 90 bp | ACTGTAAGGGAAAGGAACCCCACCCTCCTTCAGGACAGCTATAAATaGCACAAAGTTAGCCCTCTGGAGTCCATTTTTATAGAGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVRERNPTLLQDSYK*HKVSPLESIFIEIF Trigger: GAAGATCTCTATAAAAATGGACTCCAGAGGGCTAACTTTGTGCCATTTATAGCTGTCCTGAAGGAGGGTGGGGTTCCTTTCCCTTACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
||
| CDS-3UTR CAA 90 bp | GACATCTCACTGTCTCGCAGCCCTAACCAGTCACCTTTTCCTTTTAATCTTGTCATTCCAAATAGTCACTaGCTCCAAGTGGTCTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DISLSRSPNQSPFPFNLVIPNSH*LQVVSH Trigger: GTGAGAGACCACTTGGAGCAAGTGACTATTTGGAAT...GACAAGATTAAAAGGAAAAGGTGACTGGTTAGGGCTGCGAGACAGTGAGATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS CCA 90 bp | ATCCAGCTGGAGCGTATCACAATATTCCTTCAGGACAGCTATAAATaGCACAAAGTTAGCCCTCTGGAGTCCATTTTTATAGAGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IQLERITIFLQDSYK*HKVSPLESIFIEIF Trigger: GAAGATCTCTATAAAAATGGACTCCAGAGGGCTAACTTTGTGCCATTTATAGCTGTCCTGAAGGAATATTGTGATACGCTCCAGCTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
||
| CDS CCA 72 bp | AGCCAAGGCTTTCAAACGGGCCTCAGAAGCGGCTGTTaGGCGTACACCCTCGGATGTCTGGACTGTGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SQGFQTGLRSGC*AYTLGCLDCVG Trigger: GCCTACACAGTCCAGACATCCGAGGGTGTACGCCCAACAGCCGCTTCTGAGGCCCGTTTGAAAGCCTTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
||
| CDS CAA 90 bp | CGTGGCAAACAGCCAAGGCTTTCAAACGGGCCTCAGAAGCGGCTGTaGGGCGTACACCCTCGGATGTCTGGACTGTGTAGGCTTTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RGKQPRLSNGPQKRL*GVHPRMSGLCRLST Trigger: TGTGGAAAGCCTACACAGTCCAGACATCCGAGGGTGTACGCCCAACAGCCGCTTCTGAGGCCCGTTTGAAAGCCTTGGCTGTTTGCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
||
| CDS TCA 72 bp | TTCTTTGATGTTCATCCTCCCTCAGCTCCTGAGATTTaGTCAGAAAGTCGTAGTGGTCCAGAGGCCCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FFDVHPPSAPEI*SESRSGPEARG Trigger: GCCACGGGCCTCTGGACCACTACGACTTTCTGATCAAATCTCAGGAGCTGAGGGAGGATGAACATCAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
||
| CDS CCA 72 bp | AATCCCGCCTTCCTTTTTGGCAAACTCTGTTTAAGGTaGTGTATCCTTCTGTGCACGTCCAGCATGAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: NPAFLFGKLCLR*CILLCTSSMKP Trigger: CGGCTTCATGCTGGACGTGCACAGAAGGATACACCACCTTAAACAGAGTTTGCCAAAAAGGAAGGCGGGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000151747.8 |
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| CDS TCA 72 bp | ACTGATTTCCTCGGCTATGGGAGCTATCGGGTCATATaGCTTAGCCATGAATCCCGCCTTCCTTTTTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: TDFLGYGSYRVI*LSHESRLPFWQ Trigger: TTGCCAAAAAGGAAGGCGGGATTCATGGCTAAGTCATATGACCCGATAGCTCCCATAGCCGAGGAAATCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 ENSMUST00000149832.2 ENSMUST00000151747.8 |
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| CDS CCA 72 bp | GAAAGGAACCCCACCCTCCTTCAGGACAGCTATAAATaGCACAAAGTTAGCCCTCTGGAGTCCATTTTTATA | + |
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Preference number: 6 (lower is better) Translates to: ERNPTLLQDSYK*HKVSPLESIFI Trigger: TATAAAAATGGACTCCAGAGGGCTAACTTTGTGCCATTTATAGCTGTCCTGAAGGAGGGTGGGGTTCCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133326.8 |
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| CDS CCA 72 bp | GAGCGTATCACAATATTCCTTCAGGACAGCTATAAATaGCACAAAGTTAGCCCTCTGGAGTCCATTTTTATA | + |
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Preference number: 6 (lower is better) Translates to: ERITIFLQDSYK*HKVSPLESIFI Trigger: TATAAAAATGGACTCCAGAGGGCTAACTTTGTGCCATTTATAGCTGTCCTGAAGGAATATTGTGATACGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000151747.8 |
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| CDS CAA 72 bp | TCGTTTCCACATATGCATAAAACATGTCCATCACCATaGTTTTTCCTGTACCAACGTCTCCATAAACATAGA | + |
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Preference number: 6 (lower is better) Translates to: SFPHMHKTCPSP*FFLYQRLHKHR Trigger: TCTATGTTTATGGAGACGTTGGTACAGGAAAAACAATGGTGATGGACATGTTTTATGCATATGTGGAAACGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041024.15 ENSMUST00000133326.8 |
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