Pregenerated sensors for AFF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049470Ensembl transcript IDs: ENSMUST00000060945.12, ENSMUST00000152616.3, ENSMUST00000153821.2
Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CAGCCCAGAGCTGGAAAGCAGAGCCCCGAACTGCAGCAGCGGGGCTaGAAGCACAGGGAGAGGGTGCTTGCTCTACTTCTAAGGCCTCCC | + |
Preference number: 1 (lower is better) Translates to: QPRAGKQSPELQQRG*KHRERVLALLLRPP Trigger: GGGAGGCCTTAGAAGTAGAGCAAGCACCCTCTCCCTGTGCTTTCAGCCCCGCTGCTGCAGTTCGGGGCTCTGCTTTCCAGCTCTGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 90 bp | GAATGCGCTGCACACAGCCCAGAGCTGGAAAGCAGAGCCCCGAACTaGAGCAGCGGGGCTGAAAGCACAGGGAGAGGGTGCTTGCTCTAC | + |
Preference number: 1 (lower is better) Translates to: ECAAHSPELESRAPN*SSGAESTGRGCLLY Trigger: GTAGAGCAAGCACCCTCTCCCTGTGCTTTCAGCCCCGCTGCTGCAGTTCGGGGCTCTGCTTTCCAGCTCTGGGCTGTGTGCAGCGCATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | GCCCAGCCTCTCCCAGGCAGGACTACTGTGACAGCTGCATCACTGTaGTCCTGTGATCACCTGTCCAGAGTCCAATGGTGCATGCTGCTG | + |
Preference number: 1 (lower is better) Translates to: AQPLPGRTTVTAASL*SCDHLSRVQWCMLL Trigger: CAGCAGCATGCACCATTGGACTCTGGACAGGTGATCACAGGATCACAGTGATGCAGCTGTCACAGTAGTCCTGCCTGGGAGAGGCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | TCTCCCAGGCAGGACTACTGTGACAGCTGCATCACTGTGATCCTGTaGTCACCTGTCCAGAGTCCAATGGTGCATGCTGCTGCCTCCTGC | + |
Preference number: 1 (lower is better) Translates to: SPRQDYCDSCITVIL*SPVQSPMVHAAASC Trigger: GCAGGAGGCAGCAGCATGCACCATTGGACTCTGGACAGGTGATCACAGGATCACAGTGATGCAGCTGTCACAGTAGTCCTGCCTGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | CGGGCAACTGTAGTCACAGACAGCTGTGAGCCACCATATGGTTGCTaGGACTTGAACCTGGGTCATCTGGAAGTGCAGGCAGTGGCCCTT | + |
Preference number: 1 (lower is better) Translates to: RATVVTDSCEPPYGC*DLNLGHLEVQAVAL Trigger: AAGGGCCACTGCCTGCACTTCCAGATGACCCAGGTTCAAGTCTCAGCAACCATATGGTGGCTCACAGCTGTCTGTGACTACAGTTGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 90 bp | ACTGAGCAAGGAAAGGGCTGGGTGTTCTCCAGCCAGAATGGGACATaGGCTAGGCTGTGTAATCTTGAATGCATGGAGGGGAGTGCTCCC | + |
Preference number: 1 (lower is better) Translates to: TEQGKGWVFSSQNGT*ARLCNLECMEGSAP Trigger: GGGAGCACTCCCCTCCATGCATTCAAGATTACACAGCCTAGCCCATGTCCCATTCTGGCTGGAGAACACCCAGCCCTTTCCTTGCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | CCCCACCTCTACCCTCACCCATGTACTGTTGAATGCTCATGTCAGTaGTGTGCCAGGTGTGAGCATAAAGGGGACACCTCTGGATCAGCA | + |
Preference number: 1 (lower is better) Translates to: PHLYPHPCTVECSCQ*CARCEHKGDTSGSA Trigger: TGCTGATCCAGAGGTGTCCCCTTTATGCTCACACCTGGCACATCACTGACATGAGCATTCAACAGTACATGGGTGAGGGTAGAGGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 90 bp | GCTCCAGGCAGTGCTTGTATTCCTGACAAGAGCCTCTGTAGGCCCTaGCTACACAATGCAAGCTCACTCGATAACCGTCAACGTACCAAA | + |
Preference number: 1 (lower is better) Translates to: APGSACIPDKSLCRP*LHNASSLDNRQRTK Trigger: TTTGGTACGTTGACGGTTATCGAGTGAGCTTGCATTGTGTAGCCAGGGCCTACAGAGGCTCTTGTCAGGAATACAAGCACTGCCTGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | ATCTTAAAGCAGCACCATGAACACGTAGGAAACTCTGCTTTAGCATaGCGTCAGAGGCGCACTAGAATGCGCTGCACACAGCCCAGAGCT | + |
Preference number: 1 (lower is better) Translates to: ILKQHHEHVGNSALA*RQRRTRMRCTQPRA Trigger: AGCTCTGGGCTGTGTGCAGCGCATTCTAGTGCGCCTCTGACGTCATGCTAAAGCAGAGTTTCCTACGTGTTCATGGTGCTGCTTTAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 90 bp | AGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATaGAGGTTACTAGCACAAGAGAGGAACCGATGGCCTCTGAAGAAG | + |
Preference number: 1 (lower is better) Translates to: SEREEARTGHTAVRP*RLLAQERNRWPLKK Trigger: CTTCTTCAGAGGCCATCGGTTCCTCTCTTGTGCTAGTAACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 90 bp | GAGCATAAAGGGGACACCTCTGGATCAGCAACAAGCTCAACTATATaGACACCATGGCACTGGTGTGAAAGGCAGCACTTCCAAGTCGAC | + |
Preference number: 1 (lower is better) Translates to: EHKGDTSGSATSSTI*TPWHWCERQHFQVD Trigger: GTCGACTTGGAAGTGCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATCCAGAGGTGTCCCCTTTATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | CATACCCTCATACCTAGAAGAGTGTACAGCATCCCCCTTCTCAATTaGGCTAGGCATCACCCCACGGAGCTATTCCTGGTTGCACTAGAA | + |
Preference number: 1 (lower is better) Translates to: HTLIPRRVYSIPLLN*ARHHPTELFLVALE Trigger: TTCTAGTGCAACCAGGAATAGCTCCGTGGGGTGATGCCTAGCTCAATTGAGAAGGGGGATGCTGTACACTCTTCTAGGTATGAGGGTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 90 bp | TCAGAAACAGGTGGTGAAGGAGTCAGAGAGGATTTGCGACACTGCTaGGTGAAGGTTGCTATCCCCTCTTCCTCCTTTCCATTCAAGTCT | + |
Preference number: 1 (lower is better) Translates to: SETGGEGVREDLRHC*VKVAIPSSSFPFKS Trigger: AGACTTGAATGGAAAGGAGGAAGAGGGGATAGCAACCTTCACGCAGCAGTGTCGCAAATCCTCTCTGACTCCTTCACCACCTGTTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 90 bp | TCTTCAGAAACAGGTGGTGAAGGAGTCAGAGAGGATTTGCGACACTaGTGCGTGAAGGTTGCTATCCCCTCTTCCTCCTTTCCATTCAAG | + |
Preference number: 1 (lower is better) Translates to: SSETGGEGVREDLRH*CVKVAIPSSSFPFK Trigger: CTTGAATGGAAAGGAGGAAGAGGGGATAGCAACCTTCACGCAGCAGTGTCGCAAATCCTCTCTGACTCCTTCACCACCTGTTTCTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 90 bp | ATAACTTCTTGCCCAGAAAAAGGTGTCACTGAGCAAGGAAAGGGCTaGGTGTTCTCCAGCCAGAATGGGACATGGGCTAGGCTGTGTAAT | + |
Preference number: 1 (lower is better) Translates to: ITSCPEKGVTEQGKG*VFSSQNGTWARLCN Trigger: ATTACACAGCCTAGCCCATGTCCCATTCTGGCTGGAGAACACCCAGCCCTTTCCTTGCTCAGTGACACCTTTTTCTGGGCAAGAAGTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | GCTCATCTGAGAGCTTTCTCCACGTTTAAAGATGATGATTCCTGCTaGGCTGATCAATGGCAGCAAGGAGAGAGGCACAGGCAGACATTC | + |
Preference number: 1 (lower is better) Translates to: AHLRAFSTFKDDDSC*ADQWQQGERHRQTF Trigger: GAATGTCTGCCTGTGCCTCTCTCCTTGCTGCCATTGATCAGCTCAGCAGGAATCATCATCTTTAAACGTGGAGAAAGCTCTCAGATGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | CAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGCTCATCTaGGAGCTTTCTCCACGTTTAAAGATGATGATTCCTGCTGAGCTG | + |
Preference number: 1 (lower is better) Translates to: QVSLGLLGGSLSTLI*ELSPRLKMMIPAEL Trigger: CAGCTCAGCAGGAATCATCATCTTTAAACGTGGAGAAAGCTCTCAGATGAGCGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 90 bp | TTCTGTAACCAAAAACTGAGATCTGTGCTGGCGGGGCCAGACCTTTaGAGAGTCAGACTGAACCCTAAGACACAAAGAGCAACTACACAA | + |
Preference number: 1 (lower is better) Translates to: FCNQKLRSVLAGPDL*RVRLNPKTQRATTQ Trigger: TTGTGTAGTTGCTCTTTGTGTCTTAGGGTTCAGTCTGACTCTGCAAAGGTCTGGCCCCGCCAGCACAGATCTCAGTTTTTGGTTACAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 90 bp | AAAAGAAGTATAGAGGAAGAGAGACATCCTCGCCCTTCACTGCTATaGGCACCTTGCGGGAACAGTAGTTTGATAAGGAACTGTTACAGA | + |
Preference number: 1 (lower is better) Translates to: KRSIEEERHPRPSLL*APCGNSSLIRNCYR Trigger: TCTGTAACAGTTCCTTATCAAACTACTGTTCCCGCAAGGTGCGCATAGCAGTGAAGGGCGAGGATGTCTCTCTTCCTCTATACTTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 90 bp | AAAACAATAACAGCTACTCTAAAGCCACAAGTGTGTCATTCAAAGTaGAGCCCAGGTGCCTGTAAATCCCTAGTGCAAGAGCTTCCCAGA | + |
Preference number: 1 (lower is better) Translates to: KTITATLKPQVCHSK*SPGACKSLVQELPR Trigger: TCTGGGAAGCTCTTGCACTAGGGATTTACAGGCACCTGGGCTGCACTTTGAATGACACACTTGTGGCTTTAGAGTAGCTGTTATTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 90 bp | TCTTACTACACTTTGCTTTCTCCCAGGGTCTCTCTGTGTAGAGCATaGTGGTCTCAAACTGACAGTCCAAGTGCTAGAATTAAAGCATGC | + |
Preference number: 1 (lower is better) Translates to: SYYTLLSPRVSLCRA*WSQTDSPSARIKAC Trigger: GCATGCTTTAATTCTAGCACTTGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAGCAAAGTGTAGTAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 90 bp | GTAATTAACACGAGTTCTGCAGAATGGCATCCTCTTACTACACTTTaGTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTGGTCTCAAA | + |
Preference number: 1 (lower is better) Translates to: VINTSSAEWHPLTTL*FLPGSLCVEHAGLK Trigger: TTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAGCAAAGTGTAGTAAGAGGATGCCATTCTGCAGAACTCGTGTTAATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 90 bp | TACTACACTTTGCTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTaGTCTCAAACTGACAGTCCAAGTGCTAGAATTAAAGCATGCACT | + |
Preference number: 1 (lower is better) Translates to: YYTLLSPRVSLCRAC*SQTDSPSARIKACT Trigger: AGTGCATGCTTTAATTCTAGCACTTGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAGCAAAGTGTAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | CAAGAACTGACAGTTTTAAAGGGAAAACATCTTAAAGCAGCACCATaGACACGTAGGAAACTCTGCTTTAGCATGACGTCAGAGGCGCAC | + |
Preference number: 1 (lower is better) Translates to: QELTVLKGKHLKAAP*TRRKLCFSMTSEAH Trigger: GTGCGCCTCTGACGTCATGCTAAAGCAGAGTTTCCTACGTGTTCATGGTGCTGCTTTAAGATGTTTTCCCTTTAAAACTGTCAGTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 90 bp | GTATGGGAAAGGTACATTTACAAATGTGACCGCTGGCCTAGTCAGTaGGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACT | + |
Preference number: 1 (lower is better) Translates to: VWERYIYKCDRWPSQ*VFPDLLSIFPTDFT Trigger: AGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGTCACATTTGTAAATGTACCTTTCCCATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 90 bp | TTAGTTAACCATGGGGTTCATGTAATTAACACGAGTTCTGCAGAATaGCATCCTCTTACTACACTTTGCTTTCTCCCAGGGTCTCTCTGT | + |
Preference number: 1 (lower is better) Translates to: LVNHGVHVINTSSAE*HPLTTLCFLPGSLC Trigger: ACAGAGAGACCCTGGGAGAAAGCAAAGTGTAGTAAGAGGATGCCATTCTGCAGAACTCGTGTTAATTACATGAACCCCATGGTTAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | AAAACAGCAACTGTGGACGCATGCACACATTACTCTGAATTGCTTTaGCAGTGGAGAATTAAATCAGTAGTGGTCAACCTTCTCCCTTCA | + |
Preference number: 1 (lower is better) Translates to: KTATVDACTHYSELL*QWRIKSVVVNLLPS Trigger: TGAAGGGAGAAGGTTGACCACTACTGATTTAATTCTCCACTGTCAAAGCAATTCAGAGTAATGTGTGCATGCGTCCACAGTTGCTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 90 bp | AACCAAAGAGGAGAAAACCATTCCTCATTCTTAGTGTCGACTAGGTaGTGTGTTATGGCAGTTTTCCTTTGTGATGTGACACAGTGTTGT | + |
Preference number: 1 (lower is better) Translates to: NQRGENHSSFLVSTR*CVMAVFLCDVTQCC Trigger: ACAACACTGTGTCACATCACAAAGGAAAACTGCCATAACACACCACCTAGTCGACACTAAGAATGAGGAATGGTTTTCTCCTCTTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 90 bp | ACACCATTCCACCCACCTAAAACAGTCATCCTCAGTAGATGTCCTTaGGACCCAGACACCTTACAGACTCCTATAAATCAAAATATACAA | + |
Preference number: 1 (lower is better) Translates to: TPFHPPKTVILSRCP*DPDTLQTPINQNIQ Trigger: TTGTATATTTTGATTTATAGGAGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGGTGGGTGGAATGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 90 bp | CTCCATTTCTGCACCCATGCAGAATGCCGTCTTCTCATGTTTAAATaGCTTTTCACATGTGGAAGAGCATCCTTAATACCAAGCATAAAT | + |
Preference number: 1 (lower is better) Translates to: LHFCTHAECRLLMFK*LFTCGRASLIPSIN Trigger: ATTTATGCTTGGTATTAAGGATGCTCTTCCACATGTGAAAAGTCATTTAAACATGAGAAGACGGCATTCTGCATGGGTGCAGAAATGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CAA 90 bp | CTAACTGTGCTTACCAACCTAGTGTCTGGCCCTCAAGTGGGGCCTTaGCAGGCCCTGCCAATTGAGCCAGGGCTGTTGGCTAGCCCCACC | + |
Preference number: 2 (lower is better) Translates to: LTVLTNLVSGPQVGP*QALPIEPGLLASPT Trigger: GGTGGGGCTAGCCAACAGCCCTGGCTCAATTGGCAGGGCCTGCAAAGGCCCCACTTGAGGGCCAGACACTAGGTTGGTAAGCACAGTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGAGAGGCGCACTAGAATaGGCTGCACACAGCCCAGAG | + |
Preference number: 2 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTRGALE*AAHSPE Trigger: CTCTGGGCTGTGTGCAGCGCATTCTAGTGCGCCTCT...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCTCCAGAGTCCAATGGTaGATGCTGCTGCCTCCTGCC | + |
Preference number: 2 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSSRVQW*MLLPPA Trigger: GGCAGGAGGCAGCAGCATGCACCATTGGACTCTGGA...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCCACACAGCCCAGAGCTaGAAAGCAGAGCCCCGAACT | + |
Preference number: 2 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSHTAQS*KAEPRT Trigger: AGTTCGGGGCTCTGCTTTCCAGCTCTGGGCTGTGTG...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CAA 90 bp | CATCCTCGCCCTTCACTGCTATGCGCACCTTGCGGGAACAGTAGTTaGATAAGGAACTGTTACAGAGCTGGCTTCCTAAGCCCTGTCTCT | + |
Preference number: 2 (lower is better) Translates to: HPRPSLLCAPCGNSS*IRNCYRAGFLSPVS Trigger: AGAGACAGGGCTTAGGAAGCCAGCTCTGTAACAGTTCCTTATCAAACTACTGTTCCCGCAAGGTGCGCATAGCAGTGAAGGGCGAGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CAA 90 bp | ATGGGTCTCAGCATCTCAGGTTCTCTATCTAGCAAAGGATGGCCTTaGCCTCAGGGTATGCACCCGCACTCCTGGCCTTCTCTAACCTTA | + |
Preference number: 2 (lower is better) Translates to: MGLSISGSLSSKGWP*PQGMHPHSWPSLTL Trigger: TAAGGTTAGAGAAGGCCAGGAGTGCGGGTGCATACCCTGAGGCAAAGGCCATCCTTTGCTAGATAGAGAACCTGAGATGCTGAGACCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CAA 90 bp | CTCCTGGCCTTCTCTAACCTTAAACATGTGTTCCTCCTCCCTGGCTaGGTTTTAGGGTCTGAAAAGTCGCAGCTGAATGCCTCCACTGGA | + |
Preference number: 2 (lower is better) Translates to: LLAFSNLKHVFLLPG*VLGSEKSQLNASTG Trigger: TCCAGTGGAGGCATTCAGCTGCGACTTTTCAGACCCTAAAACCAAGCCAGGGAGGAGGAACACATGTTTAAGGTTAGAGAAGGCCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | CTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTGGTCTCAAACTGACAGTCCACTGTGTAATCTTGAATaGATGGAGGGGAGTGCTCCC | + |
Preference number: 2 (lower is better) Translates to: LSPRVSLCRACWSQTDSPLCNLE*MEGSAP Trigger: GGGAGCACTCCCCTCCATGCATTCAAGATTACACAG...TGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGGTAATCTTGAATGCATaGAGGGGAGTGCTCCCACAG | + |
Preference number: 2 (lower is better) Translates to: TAGLVSASSQTFSVFFLLVILNA*RGVLPQ Trigger: CTGTGGGAGCACTCCCCTCCATGCATTCAAGATTAC...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGCTTAAAGCAGCACCATaGACACGTAGGAAACTCTGC | + |
Preference number: 2 (lower is better) Translates to: TAGLVSASSQTFSVFFLLLKAAP*TRRKLC Trigger: GCAGAGTTTCCTACGTGTTCATGGTGCTGCTTTAAG...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGAGAAAAAGGTGTCACTaGGCAAGGAAAGGGCTGGGT | + |
Preference number: 2 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTRKRCH*ARKGLG Trigger: ACCCAGCCCTTTCCTTGCTCAGTGACACCTTTTTCT...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCCTCAGTAGATGTCCTTaGGACCCAGACACCTTACAG | + |
Preference number: 2 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSLSRCP*DPDTLQ Trigger: CTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAG...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CAA 90 bp | AGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGAGAGGATTaGCGACACTGCTGCGTGAAGGTTGCTATCCCCTCTTCCTCCTTT | + |
Preference number: 2 (lower is better) Translates to: SSLSSETGGEGVRED*RHCCVKVAIPSSSF Trigger: AAAGGAGGAAGAGGGGATAGCAACCTTCACGCAGCAGTGTCGCAAATCCTCTCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCTCAAGCTCCAGTTCCTaGACTGTCAGATCTGAGCAT | + |
Preference number: 2 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSSSSSS*TVRSEH Trigger: ATGCTCAGATCTGACAGTTCAGGAACTGGAGCTTGA...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGTTCAGAAACAGGTGGTaGAGGAGTCAGAGAGGATTT | + |
Preference number: 2 (lower is better) Translates to: TAGLVSASSQTFSVFFLLFRNRW*RSQRGF Trigger: AAATCCTCTCTGACTCCTTCACCACCTGTTTCTGAA...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | CTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTGGTCTCAAACTGACAGTCCAGCAACTGTGGACGCATaGACACATTACTCTGAATTG | + |
Preference number: 2 (lower is better) Translates to: LSPRVSLCRACWSQTDSPATVDA*THYSEL Trigger: CAATTCAGAGTAATGTGTGCATGCGTCCACAGTTGC...TGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTGAACTGTTACAGAGCTaGCTTCCTAAGCCCTGTCTC | + |
Preference number: 2 (lower is better) Translates to: PKTVILSRCPWDPDTLQTELLQS*LPKPCL Trigger: GAGACAGGGCTTAGGAAGCCAGCTCTGTAACAGTTC...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCCTATCTAGCAAAGGATaGCCTTTGCCTCAGGGTATG | + |
Preference number: 2 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSLSSKG*PLPQGM Trigger: CATACCCTGAGGCAAAGGCCATCCTTTGCTAGATAG...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR-3UTR TCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGCTGAACTGTCAGATCTaGGCATCACAATCTCTCCAC | + |
Preference number: 2 (lower is better) Translates to: LPKPCLYHLPLSKKAHNELNCQI*ASQSLH Trigger: GTGGAGAGATTGTGATGCTCAGATCTGACAGTTCAG...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGCCCATTTCTATGTGGTaGGGAAAATCCTCCACAATG | + |
Preference number: 2 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTPISMW*GKSSTM Trigger: CATTGTGGAGGATTTTCCTCACCACATAGAAATGGG...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR-3UTR TCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGACAGCTGCATCACTGTaGTCCTGTGATCACCTGTCC | + |
Preference number: 2 (lower is better) Translates to: KLDGICIPHPRGMSYRSPTAASL*SCDHLS Trigger: GGACAGGTGATCACAGGATCACAGTGATGCAGCTGT...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCGCAATGAATACAGGCTaGAGCCTTCAGAAACTGGAT | + |
Preference number: 2 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSAMNTG*SLQKLD Trigger: ATCCAGTTTCTGAAGGCTGCAGCCTGTATTCATTGC...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTTTAGTGTCGACTAGGTaGTGTGTTATGGCAGTTTTC | + |
Preference number: 2 (lower is better) Translates to: RVREKRQGQDTQLLDHGGLVSTR*CVMAVF Trigger: GAAAACTGCCATAACACACCACCTAGTCGACACTAA...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGAAGGACCAACCATGCATaGCTAATCTGGTCCCAGCAT | + |
Preference number: 2 (lower is better) Translates to: ETAGQSSLSSETGGEGVRRTNHA*LIWSQH Trigger: ATGCTGGGACCAGATTAGCCATGCATGGTTGGTCCT...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTTTGAAAGAACATAGGTaGGTAGCTGTAGAGAGAACA | + |
Preference number: 2 (lower is better) Translates to: RVREKRQGQDTQLLDHGGLKEHR*VAVERT Trigger: TGTTCTCTCTACAGCTACTCACCTATGTTCTTTCAA...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGCTGAGACAAAACATCTaGGAAGAGACACAGAGTGTA | + |
Preference number: 2 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTLRQNI*EETQSV Trigger: TACACTCTGTGTCTCTTCTCAGATGTTTTGTCTCAG...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCATGCACACATTACTCTaGATTGCTTTGACAGTGGAG | + |
Preference number: 2 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSMHTLL*IALTVE Trigger: CTCCACTGTCAAAGCAATTCAGAGTAATGTGTGCAT...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGGAAAATCCTCCACAATaGAAGGTTCAACCATTTCAT | + |
Preference number: 2 (lower is better) Translates to: TAGLVSASSQTFSVFFLLENPPQ*KVQPFH Trigger: ATGAAATGGTTGAACCTTTCATTGTGGAGGATTTTC...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCGGTGTACAATATTACTaGAAAAGAAGTCTGCCTCTC | + |
Preference number: 2 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSGVQYY*KRSLPL Trigger: GAGAGGCAGACTTCTTTTCCAGTAATATTGTACACC...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGTTAAGAGCAGTGAACTaGGCATTAACAATAGTTGCT | + |
Preference number: 2 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTLRAVN*ALTIVA Trigger: AGCAACTATTGTTAATGCTCAGTTCACTGCTCTTAA...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGATGCACCCATGCAGAATaGCGTCTTCTCATGTTTAAA | + |
Preference number: 2 (lower is better) Translates to: ETAGQSSLSSETGGEGVRCTHAE*RLLMFK Trigger: TTTAAACATGAGAAGACGGCATTCTGCATGGGTGCA...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCACGCACTAGAATGCGCTaGACACAGCCCAGAGCTGGA | + |
Preference number: 2 (lower is better) Translates to: FSSSVTLFEALTDNKVTSRTRMR*TQPRAG Trigger: TCCAGCTCTGGGCTGTGTGCAGCGCATTCTAGTGCG...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGCATGCTGCTGCCTCCTaGCATAGAAATGTGATCTTA | + |
Preference number: 2 (lower is better) Translates to: KLDGICIPHPRGMSYRSPHAAAS*HRNVIL Trigger: TAAGATCACATTTCTATGGCAGGAGGCAGCAGCATG...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTAATGTAGTCACCTTGTaGTTGCTAGTGTTACTAACA | + |
Preference number: 2 (lower is better) Translates to: PKTVILSRCPWDPDTLQTNVVTL*LLVLLT Trigger: TGTTAGTAACACTAGCAATCACAAGGTGACTACATT...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGCACATTACTCTGAATTaGTTTGACAGTGGAGAATTA | + |
Preference number: 2 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTHITLN*FDSGEL Trigger: TAATTCTCCACTGTCAAAGCAATTCAGAGTAATGTG...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGATGACTTTTCACATGTaGAAGAGCATCCTTAATACC | + |
Preference number: 2 (lower is better) Translates to: LPKPCLYHLPLSKKAHNEMTFHM*KSILNT Trigger: GGTATTAAGGATGCTCTTCCACATGTGAAAAGTCAT...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGGCAGCCTTCAGAAACTaGATCACTGTTTTTAGGAGT | + |
Preference number: 2 (lower is better) Translates to: KLDGICIPHPRGMSYRSPAAFRN*ITVFRS Trigger: ACTCCTAAAAACAGTGATCCAGTTTCTGAAGGCTGC...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGACATGCATGGCTAATCTaGTCCCAGCATAAAACTTTA | + |
Preference number: 2 (lower is better) Translates to: ETAGQSSLSSETGGEGVRHAWLI*SQHKTL Trigger: TAAAGTTTTATGCTGGGACCAGATTAGCCATGCATG...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTAAGCCTCTGTAGGCCCTaGCTACACAATGCAAGCTCA | + |
Preference number: 2 (lower is better) Translates to: SSQTFSVFFLLILLIATLSLCRP*LHNASS Trigger: TGAGCTTGCATTGTGTAGCCAGGGCCTACAGAGGCT...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGATTTTCCTTTGTGATGTaGCACAGTGTTGTGGAAAAA | + |
Preference number: 2 (lower is better) Translates to: ETAGQSSLSSETGGEGVRFSFVM*HSVVEK Trigger: TTTTTCCACAACACTGTGTCACATCACAAAGGAAAA...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCGGCAGTTTTCCTTTGTaGTGTGACACAGTGTTGTGG | + |
Preference number: 2 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFGSFPL*CDTVLW Trigger: CCACAACACTGTGTCACATCACAAAGGAAAACTGCC...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR TCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCACAGGCAGGACTACTGTaGCAGCTGCATCACTGTGAT | + |
Preference number: 2 (lower is better) Translates to: FSSSVTLFEALTDNKVTSQAGLL*QLHHCD Trigger: ATCACAGTGATGCAGCTGTCACAGTAGTCCTGCCTG...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGGACTTCATAACTTCTTaGCCAGAAAAAGGTGTCACT | + |
Preference number: 2 (lower is better) Translates to: KLDGICIPHPRGMSYRSPDFITS*PEKGVT Trigger: AGTGACACCTTTTTCTGGGCAAGAAGTTATGAAGTC...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTAGGAGCTATTCCTGGTTaGACTAGAAGCTCCTCTGAG | + |
Preference number: 2 (lower is better) Translates to: SSQTFSVFFLLILLIATLGAIPG*TRSSSE Trigger: CTCAGAGGAGCTTCTAGTGCAACCAGGAATAGCTCC...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTAGTGTGTCATTCAAAGTaGAGCCCAGGTGCCTGTAAA | + |
Preference number: 2 (lower is better) Translates to: SSQTFSVFFLLILLIATLVCHSK*SPGACK Trigger: TTTACAGGCACCTGGGCTGCACTTTGAATGACACAC...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTAATCCCTCCCCAGTGTTaGGATTACAGATATACAAAA | + |
Preference number: 2 (lower is better) Translates to: SSQTFSVFFLLILLIATLIPPQC*DYRYTK Trigger: TTTTGTATATCTGTAATCCCAACACTGGGGAGGGAT...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR GCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCAAAAACCATGCTCAGCTaGTACTGTGAGTTTTCTGAT | + |
Preference number: 2 (lower is better) Translates to: FSSSVTLFEALTDNKVTSKTMLS*YCEFSD Trigger: ATCAGAAAACTCACAGTAGCAGCTGAGCATGGTTTT...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCAACAATGAGCCAAGTTTaGTACTTTCCTAGTATACAT | + |
Preference number: 2 (lower is better) Translates to: FSSSVTLFEALTDNKVTSTMSQV*YFPSIH Trigger: ATGTATACTAGGAAAGTACCAAACTTGGCTCATTGT...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 72 bp | GCACACAGCCCAGAGCTGGAAAGCAGAGCCCCGAACTaGAGCAGCGGGGCTGAAAGCACAGGGAGAGGGTGC | + |
Preference number: 3 (lower is better) Translates to: AHSPELESRAPN*SSGAESTGRGC Trigger: GCACCCTCTCCCTGTGCTTTCAGCCCCGCTGCTGCAGTTCGGGGCTCTGCTTTCCAGCTCTGGGCTGTGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 72 bp | GCAGCAGCGGGGCTGAAAGCACAGGGAGAGGGTGCTTaGTCTACTTCTAAGGCCTCCCTGAAATGGAGAAGC | + |
Preference number: 3 (lower is better) Translates to: AAAGLKAQGEGA*STSKASLKWRS Trigger: GCTTCTCCATTTCAGGGAGGCCTTAGAAGTAGAGCAAGCACCCTCTCCCTGTGCTTTCAGCCCCGCTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 72 bp | CAGAATGGGACATGGGCTAGGCTGTGTAATCTTGAATaGATGGAGGGGAGTGCTCCCACAGCCCAGCCTCTC | + |
Preference number: 3 (lower is better) Translates to: QNGTWARLCNLE*MEGSAPTAQPL Trigger: GAGAGGCTGGGCTGTGGGAGCACTCCCCTCCATGCATTCAAGATTACACAGCCTAGCCCATGTCCCATTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 72 bp | GGTCTCAGCATCTCAGGTTCTCTATCTAGCAAAGGATaGCCTTTGCCTCAGGGTATGCACCCGCACTCCTGG | + |
Preference number: 3 (lower is better) Translates to: GLSISGSLSSKG*PLPQGMHPHSW Trigger: CCAGGAGTGCGGGTGCATACCCTGAGGCAAAGGCCATCCTTTGCTAGATAGAGAACCTGAGATGCTGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | CAGCACCATGAACACGTAGGAAACTCTGCTTTAGCATaGCGTCAGAGGCGCACTAGAATGCGCTGCACACAG | + |
Preference number: 3 (lower is better) Translates to: QHHEHVGNSALA*RQRRTRMRCTQ Trigger: CTGTGTGCAGCGCATTCTAGTGCGCCTCTGACGTCATGCTAAAGCAGAGTTTCCTACGTGTTCATGGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | CTGTGCTGGCGGGGCCAGACCTTTGCAGAGTCAGACTaGACCCTAAGACACAAAGAGCAACTACACAAGAGA | + |
Preference number: 3 (lower is better) Translates to: LCWRGQTFAESD*TLRHKEQLHKR Trigger: TCTCTTGTGTAGTTGCTCTTTGTGTCTTAGGGTTCAGTCTGACTCTGCAAAGGTCTGGCCCCGCCAGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | GTAGTCACAGACAGCTGTGAGCCACCATATGGTTGCTaGGACTTGAACCTGGGTCATCTGGAAGTGCAGGCA | + |
Preference number: 3 (lower is better) Translates to: VVTDSCEPPYGC*DLNLGHLEVQA Trigger: TGCCTGCACTTCCAGATGACCCAGGTTCAAGTCTCAGCAACCATATGGTGGCTCACAGCTGTCTGTGACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 72 bp | ACAGGTGGTGAAGGAGTCAGAGAGGATTTGCGACACTaGTGCGTGAAGGTTGCTATCCCCTCTTCCTCCTTT | + |
Preference number: 3 (lower is better) Translates to: TGGEGVREDLRH*CVKVAIPSSSF Trigger: AAAGGAGGAAGAGGGGATAGCAACCTTCACGCAGCAGTGTCGCAAATCCTCTCTGACTCCTTCACCACCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 72 bp | GAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATaGAGGTTACTAGCACAAGAGAGGAACCGATGGCCT | + |
Preference number: 3 (lower is better) Translates to: EEARTGHTAVRP*RLLAQERNRWP Trigger: AGGCCATCGGTTCCTCTCTTGTGCTAGTAACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 72 bp | GGGGACACCTCTGGATCAGCAACAAGCTCAACTATATaGACACCATGGCACTGGTGTGAAAGGCAGCACTTC | + |
Preference number: 3 (lower is better) Translates to: GDTSGSATSSTI*TPWHWCERQHF Trigger: GAAGTGCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATCCAGAGGTGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 72 bp | AGAAATTTCCCTAACTGTGCTTACCAACCTAGTGTCTaGCCCTCAAGTGGGGCCTTTGCAGGCCCTGCCAAT | + |
Preference number: 3 (lower is better) Translates to: RNFPNCAYQPSV*PSSGAFAGPAN Trigger: ATTGGCAGGGCCTGCAAAGGCCCCACTTGAGGGCCAGACACTAGGTTGGTAAGCACAGTTAGGGAAATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | GTGAAGGAGTCAGAGAGGATTTGCGACACTGCTGCGTaGAGGTTGCTATCCCCTCTTCCTCCTTTCCATTCA | + |
Preference number: 3 (lower is better) Translates to: VKESERICDTAA*RLLSPLPPFHS Trigger: TGAATGGAAAGGAGGAAGAGGGGATAGCAACCTTCACGCAGCAGTGTCGCAAATCCTCTCTGACTCCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | ACATGTGTTCCTCCTCCCTGGCTTGGTTTTAGGGTCTaGAAAGTCGCAGCTGAATGCCTCCACTGGAAGGTA | + |
Preference number: 3 (lower is better) Translates to: TCVPPPWLGFRV*KVAAECLHWKV Trigger: TACCTTCCAGTGGAGGCATTCAGCTGCGACTTTTCAGACCCTAAAACCAAGCCAGGGAGGAGGAACACATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 72 bp | CAAAAACTGAGATCTGTGCTGGCGGGGCCAGACCTTTaGAGAGTCAGACTGAACCCTAAGACACAAAGAGCA | + |
Preference number: 3 (lower is better) Translates to: QKLRSVLAGPDL*RVRLNPKTQRA Trigger: TGCTCTTTGTGTCTTAGGGTTCAGTCTGACTCTGCAAAGGTCTGGCCCCGCCAGCACAGATCTCAGTTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | ATACCTAGAAGAGTGTACAGCATCCCCCTTCTCAATTaGGCTAGGCATCACCCCACGGAGCTATTCCTGGTT | + |
Preference number: 3 (lower is better) Translates to: IPRRVYSIPLLN*ARHHPTELFLV Trigger: AACCAGGAATAGCTCCGTGGGGTGATGCCTAGCTCAATTGAGAAGGGGGATGCTGTACACTCTTCTAGGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 72 bp | GAGAGACATCCTCGCCCTTCACTGCTATGCGCACCTTaGGGGAACAGTAGTTTGATAAGGAACTGTTACAGA | + |
Preference number: 3 (lower is better) Translates to: ERHPRPSLLCAP*GNSSLIRNCYR Trigger: TCTGTAACAGTTCCTTATCAAACTACTGTTCCCGCAAGGTGCGCATAGCAGTGAAGGGCGAGGATGTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 72 bp | ATAGAGGAAGAGAGACATCCTCGCCCTTCACTGCTATaGGCACCTTGCGGGAACAGTAGTTTGATAAGGAAC | + |
Preference number: 3 (lower is better) Translates to: IEEERHPRPSLL*APCGNSSLIRN Trigger: GTTCCTTATCAAACTACTGTTCCCGCAAGGTGCGCATAGCAGTGAAGGGCGAGGATGTCTCTCTTCCTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 72 bp | AGTCAGAGAGGATTTGCGACACTGCTGCGTGAAGGTTaGTATCCCCTCTTCCTCCTTTCCATTCAAGTCTCA | + |
Preference number: 3 (lower is better) Translates to: SQRGFATLLREG*YPLFLLSIQVS Trigger: TGAGACTTGAATGGAAAGGAGGAAGAGGGGATAGCAACCTTCACGCAGCAGTGTCGCAAATCCTCTCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR CCA 72 bp | AGTGCTTGTATTCCTGACAAGAGCCTCTGTAGGCCCTaGCTACACAATGCAAGCTCACTCGATAACCGTCAA | + |
Preference number: 3 (lower is better) Translates to: SACIPDKSLCRP*LHNASSLDNRQ Trigger: TTGACGGTTATCGAGTGAGCTTGCATTGTGTAGCCAGGGCCTACAGAGGCTCTTGTCAGGAATACAAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR TCA 72 bp | CCTCCTTTCAAGCTCCAGTTCCTGAACTGTCAGATCTaGGCATCACAATCTCTCCACCATAGGGGAAATCCA | + |
Preference number: 3 (lower is better) Translates to: PPFKLQFLNCQI*ASQSLHHRGNP Trigger: TGGATTTCCCCTATGGTGGAGAGATTGTGATGCTCAGATCTGACAGTTCAGGAACTGGAGCTTGAAAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR TCA 72 bp | TGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTaGAGGAGTCAGAGAGGATTTGCGACACTGCTGCGT | + |
Preference number: 3 (lower is better) Translates to: CRTKFTIFRNRW*RSQRGFATLLR Trigger: ACGCAGCAGTGTCGCAAATCCTCTCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR TCA 72 bp | AGAGCTTTCTCCACGTTTAAAGATGATGATTCCTGCTaGGCTGATCAATGGCAGCAAGGAGAGAGGCACAGG | + |
Preference number: 3 (lower is better) Translates to: RAFSTFKDDDSC*ADQWQQGERHR Trigger: CCTGTGCCTCTCTCCTTGCTGCCATTGATCAGCTCAGCAGGAATCATCATCTTTAAACGTGGAGAAAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR GCA 72 bp | ACAGCTACTCTAAAGCCACAAGTGTGTCATTCAAAGTaGAGCCCAGGTGCCTGTAAATCCCTAGTGCAAGAG | + |
Preference number: 3 (lower is better) Translates to: TATLKPQVCHSK*SPGACKSLVQE Trigger: CTCTTGCACTAGGGATTTACAGGCACCTGGGCTGCACTTTGAATGACACACTTGTGGCTTTAGAGTAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR CCA 72 bp | TCAGCAACAAGCTCAACTATATGGACACCATGGCACTaGTGTGAAAGGCAGCACTTCCAAGTCGACATCTTC | + |
Preference number: 3 (lower is better) Translates to: SATSSTIWTPWH*CERQHFQVDIF Trigger: GAAGATGTCGACTTGGAAGTGCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR-3UTR CAA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGACTAGCTTTCTGTAGCTaGAGGATGATTCTGACCTCC | + |
Preference number: 3 (lower is better) Translates to: ETAGQSSLSSETGGEGVRLAFCS*RMILTS Trigger: GGAGGTCAGAATCATCCTCAAGCTACAGAAAGCTAG...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR TCA 72 bp | TTAGGACTTCTGGGTGGGAGCTTGTCCACGCTCATCTaGGAGCTTTCTCCACGTTTAAAGATGATGATTCCT | + |
Preference number: 3 (lower is better) Translates to: LGLLGGSLSTLI*ELSPRLKMMIP Trigger: AGGAATCATCATCTTTAAACGTGGAGAAAGCTCTCAGATGAGCGTGGACAAGCTCCCACCCAGAAGTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | AACAAGCTCAACTATATGGACACCATGGCACTGGTGTaGAAGGCAGCACTTCCAAGTCGACATCTTCTAGAG | + |
Preference number: 3 (lower is better) Translates to: NKLNYMDTMALV*KAALPSRHLLE Trigger: CTCTAGAAGATGTCGACTTGGAAGTGCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR TCA 72 bp | ACAAAGAGCAACTACACAAGAGATCACAGCAGCAGCTaGAGAAGCGAGAGCACAGTGCATGCAAACGTAGTA | + |
Preference number: 3 (lower is better) Translates to: TKSNYTRDHSSS*RSESTVHANVV Trigger: TACTACGTTTGCATGCACTGTGCTCTCGCTTCTTCAGCTGCTGCTGTGATCTCTTGTGTAGTTGCTCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR GCA 72 bp | ACTTTGCTTTCTCCCAGGGTCTCTCTGTGTAGAGCATaGTGGTCTCAAACTGACAGTCCAAGTGCTAGAATT | + |
Preference number: 3 (lower is better) Translates to: TLLSPRVSLCRA*WSQTDSPSARI Trigger: AATTCTAGCACTTGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAGCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 72 bp | GTCCAAGTGCTAGAATTAAAGCATGCACTACCACACTaGTTCACCAATGGGTCTCAGCATCTCAGGTTCTCT | + |
Preference number: 3 (lower is better) Translates to: VQVLELKHALPH*FTNGSQHLRFS Trigger: AGAGAACCTGAGATGCTGAGACCCATTGGTGAACCAGTGTGGTAGTGCATGCTTTAATTCTAGCACTTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR-3UTR CAA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTTATCCCTCCCCAGTGTaGGGATTACAGATATACAAA | + |
Preference number: 3 (lower is better) Translates to: PKTVILSRCPWDPDTLQTYPSPV*GLQIYK Trigger: TTTGTATATCTGTAATCCCAACACTGGGGAGGGATA...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CAA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTTGCGGGAACAGTAGTTaGATAAGGAACTGTTACAGA | + |
Preference number: 3 (lower is better) Translates to: PKTVILSRCPWDPDTLQTCGNSS*IRNCYR Trigger: TCTGTAACAGTTCCTTATCAAACTACTGTTCCCGCA...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR GCA 72 bp | AGGTACATTTACAAATGTGACCGCTGGCCTAGTCAGTaGGTCTTCCCAGACCTTCTCAGTATTTTTCCTACT | + |
Preference number: 3 (lower is better) Translates to: RYIYKCDRWPSQ*VFPDLLSIFPT Trigger: AGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGTCACATTTGTAAATGTACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
||
3UTR CCA 72 bp | CACCCACCTAAAACAGTCATCCTCAGTAGATGTCCTTaGGACCCAGACACCTTACAGACTCCTATAAATCAA | + |
Preference number: 3 (lower is better) Translates to: HPPKTVILSRCP*DPDTLQTPINQ Trigger: TTGATTTATAGGAGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGGTGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 72 bp | TTGCTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTaGTCTCAAACTGACAGTCCAAGTGCTAGAATTAAA | + |
Preference number: 3 (lower is better) Translates to: LLSPRVSLCRAC*SQTDSPSARIK Trigger: TTTAATTCTAGCACTTGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CAA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCAGGAAAAGCCATTTTTaGAAGCAGCATTATACCCAA | + |
Preference number: 3 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSRKSHF*KQHYTQ Trigger: TTGGGTATAATGCTGCTTCAAAAAATGGCTTTTCCT...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 72 bp | TCACAGCAGCAGCTGAAGAAGCGAGAGCACAGTGCATaGAAACGTAGTACAGAAAAGCTAGCTGATATTTAT | + |
Preference number: 3 (lower is better) Translates to: SQQQLKKREHSA*KRSTEKLADIY Trigger: ATAAATATCAGCTAGCTTTTCTGTACTACGTTTGCATGCACTGTGCTCTCGCTTCTTCAGCTGCTGCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 72 bp | AGAATTAAAGCATGCACTACCACACTGGTTCACCAATaGGTCTCAGCATCTCAGGTTCTCTATCTAGCAAAG | + |
Preference number: 3 (lower is better) Translates to: RIKACTTTLVHQ*VSASQVLYLAK Trigger: CTTTGCTAGATAGAGAACCTGAGATGCTGAGACCCATTGGTGAACCAGTGTGGTAGTGCATGCTTTAATTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CCA 72 bp | GGAGAAAACCATTCCTCATTCTTAGTGTCGACTAGGTaGTGTGTTATGGCAGTTTTCCTTTGTGATGTGACA | + |
Preference number: 3 (lower is better) Translates to: GENHSSFLVSTR*CVMAVFLCDVT Trigger: TGTCACATCACAAAGGAAAACTGCCATAACACACCACCTAGTCGACACTAAGAATGAGGAATGGTTTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CAA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGACAAAAGCATACATCATaGATGAGGATCTTTGGAAAG | + |
Preference number: 3 (lower is better) Translates to: ETAGQSSLSSETGGEGVRQKHTS*MRIFGK Trigger: CTTTCCAAAGATCCTCATCAATGATGTATGCTTTTG...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | TGCACCCATGCAGAATGCCGTCTTCTCATGTTTAAATaGCTTTTCACATGTGGAAGAGCATCCTTAATACCA | + |
Preference number: 3 (lower is better) Translates to: CTHAECRLLMFK*LFTCGRASLIP Trigger: TGGTATTAAGGATGCTCTTCCACATGTGAAAAGTCATTTAAACATGAGAAGACGGCATTCTGCATGGGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | ACTGTGGACGCATGCACACATTACTCTGAATTGCTTTaGCAGTGGAGAATTAAATCAGTAGTGGTCAACCTT | + |
Preference number: 3 (lower is better) Translates to: TVDACTHYSELL*QWRIKSVVVNL Trigger: AAGGTTGACCACTACTGATTTAATTCTCCACTGTCAAAGCAATTCAGAGTAATGTGTGCATGCGTCCACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR GCA 72 bp | GAAATAATGCATACTAAACCAGACCCACTCCATTTCTaGACCCATGCAGAATGCCGTCTTCTCATGTTTAAA | + |
Preference number: 3 (lower is better) Translates to: EIMHTKPDPLHF*THAECRLLMFK Trigger: TTTAAACATGAGAAGACGGCATTCTGCATGGGTGCAGAAATGGAGTGGGTCTGGTTTAGTATGCATTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CAA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCAGAACAAGTCCTGTCTaGGACAAGCCAACTCTTATC | + |
Preference number: 3 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFRTSPV*DKPTLI Trigger: GATAAGAGTTGGCTTGTCCAAGACAGGACTTGTTCT...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | GGATCAGATTTTGATCCATTGCCCATTTCTATGTGGTaGGGAAAATCCTCCACAATGAAAGGTTCAACCATT | + |
Preference number: 3 (lower is better) Translates to: GSDFDPLPISMW*GKSSTMKGSTI Trigger: AATGGTTGAACCTTTCATTGTGGAGGATTTTCCTCACCACATAGAAATGGGCAATGGATCAAAATCTGATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR-3UTR CAA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCGAAGCATTTAAATACTaGTCACATTGGGACTCTTCA | + |
Preference number: 3 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFEAFKY*SHWDSS Trigger: TGAAGAGTCCCAATGTGACAAGTATTTAAATGCTTC...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR TCA 72 bp | TCTGAGAAGAGACACAGAGTGTATTCTCACACACTATaGCATCAAAAATGCAATCGCTTAGGATCAGATTTT | + |
Preference number: 3 (lower is better) Translates to: SEKRHRVYSHTL*HQKCNRLGSDF Trigger: AAAATCTGATCCTAAGCGATTGCATTTTTGATGTCATAGTGTGTGAGAATACACTCTGTGTCTCTTCTCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CAA 72 bp | CTGGCCCTCAAGTGGGGCCTTTGCAGGCCCTGCCAATaGAGCCAGGGCTGTTGGCTAGCCCCACCTCTACCC | + |
Preference number: 4 (lower is better) Translates to: LALKWGLCRPCQ*SQGCWLAPPLP Trigger: GGGTAGAGGTGGGGCTAGCCAACAGCCCTGGCTCAATTGGCAGGGCCTGCAAAGGCCCCACTTGAGGGCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGGAGACTGAGAGGTGCTaGGGGCGGGGCCTACAGGAG | + |
Preference number: 4 (lower is better) Translates to: TAGLVSASSQTFSVFFLLETERC*GRGLQE Trigger: CTCCTGTAGGCCCCGCCCCCAGCACCTCTCAGTCTC...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CAA 72 bp | CCAGCCAGAATGGGACATGGGCTAGGCTGTGTAATCTaGAATGCATGGAGGGGAGTGCTCCCACAGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: PARMGHGLGCVI*NAWRGVLPQPS Trigger: GCTGGGCTGTGGGAGCACTCCCCTCCATGCATTCAAGATTACACAGCCTAGCCCATGTCCCATTCTGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGCATGCCTCTGGCCACTaGTGCTGGCGCCACTCCCTC | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTHASGH*CWRHSL Trigger: GAGGGAGTGGCGCCAGCAGCAGTGGCCAGAGGCATG...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGTCTGAGACTGAGAGGTaGTGGGGGCGGGGCCTACAG | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTSETER*WGRGLQ Trigger: CTGTAGGCCCCGCCCCCAGCACCTCTCAGTCTCAGA...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGCGAGCCCTTGGTGGCTaGTTTGTGCCTGCTGGAGGG | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTRALGG*FVPAGG Trigger: CCCTCCAGCAGGCACAAAGCAGCCACCAAGGGCTCG...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCTGCTGGAGGGCATGCTaGCAGCCATGTCCACAGGGG | + |
Preference number: 4 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSCWRAC*QPCPQG Trigger: CCCCTGTGGACATGGCTGCCAGCATGCCCTCCAGCA...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTGGTCTCAAACTGACAGTCCATCCTCGAGCCCTTGGTaGCTGCTTTGTGCCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: LSPRVSLCRACWSQTDSPSSSPW*LLCACW Trigger: CCAGCAGGCACAAAGCAGCCACCAAGGGCTCGAGGA...TGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGTTGGAGCCTTCTCCTTaGCCTCCTTGGAGCTGCTGG | + |
Preference number: 4 (lower is better) Translates to: TAGLVSASSQTFSVFFLLLEPSP*PPWSCW Trigger: CCAGCAGCTCCAAGGAGGCCAAGGAGAAGGCTCCAA...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGGTACTTAGGAGTCTGTaGGGAGGGAGGCAGGCTCTC | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTVLRSL*GGRQAL Trigger: GAGAGCCTGCCTCCCTCCTCACAGACTCCTAAGTAC...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGCAGATCCACTGTGGCTaGTCGAGTCATCCCTGGAGT | + |
Preference number: 4 (lower is better) Translates to: TAGLVSASSQTFSVFFLLQIHCG*SSHPWS Trigger: ACTCCAGGGATGACTCGAGCAGCCACAGTGGATCTG...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTTGTGCAGGAGACTTCTaGCTCCCACGGCCACTTTCT | + |
Preference number: 4 (lower is better) Translates to: RVREKRQGQDTQLLDHGGCAGDF*LPRPLS Trigger: AGAAAGTGGCCGTGGGAGGCAGAAGTCTCCTGCACA...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGTGGCTGCTTTGTGCCTaGTGGAGGGCATGCTGGCAG | + |
Preference number: 4 (lower is better) Translates to: LPKPCLYHLPLSKKAHNEWLLCA*WRACWQ Trigger: CTGCCAGCATGCCCTCCAGCAGGCACAAAGCAGCCA...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTGAGAGGAGAACTAGGTaGGAAGGCGTCTTCACCCTG | + |
Preference number: 4 (lower is better) Translates to: RVREKRQGQDTQLLDHGGERRTR*EGVFTL Trigger: CAGGGTGAAGACGCCTTCCCACCTAGTTCTCCTCTC...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGACTCCTGTCCATCCATaGGCCGTACATAGGCAGTGG | + |
Preference number: 4 (lower is better) Translates to: TAGLVSASSQTFSVFFLLTPVHP*AVHRQW Trigger: CCACTGCCTATGTACGGCCCATGGATGGACAGGAGT...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGTCTCCTTGGCCTCCTTaGAGCTGCTGGGACCCTTGC | + |
Preference number: 4 (lower is better) Translates to: LPKPCLYHLPLSKKAHNESPWPP*SCWDPC Trigger: GCAAGGGTCCCAGCAGCTCCAAGGAGGCCAAGGAGA...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGAGTCAGACCCAGAGCTaGTCTCAGATCCACTGTGGC | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTSQTQS*SQIHCG Trigger: GCCACAGTGGATCTGAGAGCAGCTCTGGGTCTGACT...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGGCCTGCTGGAGGGCATaGTGGCAGCCATGTCCACAG | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPACWRA*WQPCPQ Trigger: CTGTGGACATGGCTGCCAGCATGCCCTCCAGCAGGC...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTAGCTGCTCTTGCTGCTaGTGCCACTGTTCTCTTTGC | + |
Preference number: 4 (lower is better) Translates to: RVREKRQGQDTQLLDHGGSCSCC*CHCSLC Trigger: GCAAAGAGAACAGTGGCAGCAGCAGCAAGAGCAGCT...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTAGCTGCTGGGACCCTTaGCTTCAGTCTTCTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: RVREKRQGQDTQLLDHGGSCWDP*LQSSSA Trigger: AGCAGAAGAAGACTGAAGGCAAGGGTCCCAGCAGCT...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGATGGCCTCCTTGGAGCTaGTGGGACCCTTGCCTTCAG | + |
Preference number: 4 (lower is better) Translates to: ETAGQSSLSSETGGEGVRWPPWS*WDPCLQ Trigger: CTGAAGGCAAGGGTCCCAGCAGCTCCAAGGAGGCCA...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGGCATCCCAACAGCTTTaGTCCCCAAGCCGGGTGAAG | + |
Preference number: 4 (lower is better) Translates to: LPKPCLYHLPLSKKAHNEASQQL*SPSRVK Trigger: CTTCACCCGGCTTGGGGAGCAAAGCTGTTGGGATGC...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCCTCTCAGATCCACTGTaGCTGCTCGAGTCATCCCTG | + |
Preference number: 4 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSLSDPL*LLESSL Trigger: CAGGGATGACTCGAGCAGCCACAGTGGATCTGAGAG...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGCAGTTCTCCTCTGAGTaGTACTGTCGCTCTGTGCAG | + |
Preference number: 4 (lower is better) Translates to: TAGLVSASSQTFSVFFLLQFSSE*YCRSVQ Trigger: CTGCACAGAGCGACAGTACCACTCAGAGGAGAACTG...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGTCTTCTGCTTCGCTGTaGAGGAGGAGCTGCTCTTGC | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTSSASL*RRSCSC Trigger: GCAAGAGCAGCTCCTCCTCCACAGCGAAGCAGAAGA...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGCCACTGAGGAGGGTTTaGCAGGAGTCCTGTTGCTTT | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTPLRRV*QESCCF Trigger: AAAGCAACAGGACTCCTGTCAAACCCTCCTCAGTGG...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTAGGACGACGACTGACTaGCAGTCCTCTTCCGAGAAC | + |
Preference number: 4 (lower is better) Translates to: PKTVILSRCPWDPDTLQTRTTTD*QSSSEN Trigger: GTTCTCGGAAGAGGACTGTCAGTCAGTCGTCGTCCT...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTTTTAAGGACGACGACTaGCTGACAGTCCTCTTCCGA | + |
Preference number: 4 (lower is better) Translates to: RVREKRQGQDTQLLDHGGFKDDD*LTVLFR Trigger: TCGGAAGAGGACTGTCAGTCAGTCGTCGTCCTTAAA...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTGCTCCCCAAGCCGGGTaGAGGTGCTTGAGAATTACT | + |
Preference number: 4 (lower is better) Translates to: PKTVILSRCPWDPDTLQTAPQAG*RCLRIT Trigger: AGTAATTCTCAAGCACCTTCACCCGGCTTGGGGAGC...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGAGGTACTGTCGCTCTGTaGAGGAGACTTCTGCCTCCC | + |
Preference number: 4 (lower is better) Translates to: ETAGQSSLSSETGGEGVRGTVAL*RRLLPP Trigger: GGGAGGCAGAAGTCTCCTGCACAGAGCGACAGTACC...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGCTGTGGAGGAGGAGCTaGTCTTGCTGCTGCTGCCAC | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPLWRRS*SCCCCH Trigger: GTGGCAGCAGCAGCAAGAGCAGCTCCTCCTCCACAG...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTTTGAGGATCGAGATTTaGAGTGCTCTGAGCCGTGCT | + |
Preference number: 4 (lower is better) Translates to: RVREKRQGQDTQLLDHGGLRIEI*SALSRA Trigger: AGCACGGCTCAGAGCACTCCAAATCTCGATCCTCAA...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTCTTGTTTGTTGGTGGTaGTTCAGGCTCAGGAGATGC | + |
Preference number: 4 (lower is better) Translates to: RVREKRQGQDTQLLDHGGLVCWW*FRLRRC Trigger: GCATCTCCTGAGCCTGAACCACCACCAACAAACAAG...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTGGTCTCAAACTGACAGTCCATTGCCACTTGTTTGTTaGTGGTGGTTCAGGCTCAGG | + |
Preference number: 4 (lower is better) Translates to: LSPRVSLCRACWSQTDSPLPLVC*WWFRLR Trigger: CCTGAGCCTGAACCACCACCAACAAACAAGTGGCAA...TGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGAGATCTGTGTAGTTACTaGCAGTGCCCTGCTCCCGGC | + |
Preference number: 4 (lower is better) Translates to: ETAGQSSLSSETGGEGVRDLCSY*QCPAPG Trigger: GCCGGGAGCAGGGCACTGCCAGTAACTACACAGATC...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGAGTTTCCTCGAGCCCTTaGTGGCTGCTTTGTGCCTGC | + |
Preference number: 4 (lower is better) Translates to: ETAGQSSLSSETGGEGVRVSSSP*WLLCAC Trigger: GCAGGCACAAAGCAGCCACCAAGGGCTCGAGGAAAC...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGCTGCTGGATGGCTTGTaGCCTGATGAGTTCTTGTCC | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTLLDGL*PDEFLS Trigger: GGACAAGAACTCATCAGGCCACAAGCCATCCAGCAG...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGGGGTTTTCCAGGGCTTaGGGATCGAGATTTGGAGTG | + |
Preference number: 4 (lower is better) Translates to: LPKPCLYHLPLSKKAHNEGFSRA*GSRFGV Trigger: CACTCCAAATCTCGATCCTCAAGCCCTGGAAAACCC...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTGGTCTCAAACTGACAGTCCAGTTTTGCATGGTGTATaGATAGCCGTTAGAGGGGGA | + |
Preference number: 4 (lower is better) Translates to: LSPRVSLCRACWSQTDSPVLHGV*IAVRGG Trigger: TCCCCCTCTAACGGCTATTCATACACCATGCAAAAC...TGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGCCCACGGCCACTTTCTaGTCCCTTTTGGATGGTTTT | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTPTATF*SLLDGF Trigger: AAAACCATCCAAAAGGGATCAGAAAGTGGCCGTGGG...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGACCGACAGTTCTCCTCTaGGTGGTACTGTCGCTCTGT | + |
Preference number: 4 (lower is better) Translates to: ETAGQSSLSSETGGEGVRPTVLL*VVLSLC Trigger: ACAGAGCGACAGTACCACTCAGAGGAGAACTGTCGG...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTGGACGGTTTACTGGCTaGCTTGTACTTCTTCTTCTC | + |
Preference number: 4 (lower is better) Translates to: RVREKRQGQDTQLLDHGGGRFTG*LVLLLL Trigger: GAGAAGAAGAAGTACAAGTCAGCCAGTAAACCGTCC...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGACTACTCTGCTTAGATaGCTCTCTGCTGCTGGATGG | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTTTLLR*LSAAGW Trigger: CCATCCAGCAGCAGAGAGTCATCTAAGCAGAGTAGT...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGGGGGACTTGGATTCCTaGGCGTTCTTCTCTAATGCA | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTGDLDS*AFFSNA Trigger: TGCATTAGAGAAGAACGCTCAGGAATCCAAGTCCCC...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCTCTGAGGCTTGCTTCTaGACCTCTCTCGAGTGTTTC | + |
Preference number: 4 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSSEACF*TSLECF Trigger: GAAACACTCGAGAGAGGTGCAGAAGCAAGCCTCAGA...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTTGCCACTGTTCTCTTTaGTGCTGGTCCCACTGGACT | + |
Preference number: 4 (lower is better) Translates to: PKTVILSRCPWDPDTLQTCHCSL*CWSHWT Trigger: AGTCCAGTGGGACCAGCAGCAAAGAGAACAGTGGCA...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTAGTCTCGTCCTGGGGTaGCAGAGCTCGTTTCTTTTG | + |
Preference number: 4 (lower is better) Translates to: PKTVILSRCPWDPDTLQTSLVLG*QSSFLL Trigger: CAAAAGAAACGAGCTCTGCCACCCCAGGACGAGACT...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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3UTR CAA 72 bp | CCTTCACTGCTATGCGCACCTTGCGGGAACAGTAGTTaGATAAGGAACTGTTACAGAGCTGGCTTCCTAAGC | + |
Preference number: 4 (lower is better) Translates to: PSLLCAPCGNSS*IRNCYRAGFLS Trigger: GCTTAGGAAGCCAGCTCTGTAACAGTTCCTTATCAAACTACTGTTCCCGCAAGGTGCGCATAGCAGTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGGAAGGTGGGAAAGACTaGCTTGAATGTTGCCCACTT | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTEGGKD*LECCPL Trigger: AAGTGGGCAACATTCAAGTCAGTCTTTCCCACCTTC...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGTGTCATCAGGCTCACTaGGTGGGGAAAGGAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPCHQAH*VGKGAP Trigger: AGGAGCTCCTTTCCCCACTCAGTGAGCCTGATGACA...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGAGCCTTTTCTGAGGCTTaGTTCTGCACCTCTCTCGAG | + |
Preference number: 4 (lower is better) Translates to: ETAGQSSLSSETGGEGVRAFSEA*FCTSLE Trigger: CTCGAGAGAGGTGCAGAAGCAAGCCTCAGAAAAGGC...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGATGCTCTTGCTGCTGCTaGCACTGTTCTCTTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: ETAGQSSLSSETGGEGVRCSCCC*HCSLCC Trigger: GCAGCAAAGAGAACAGTGGCAGCAGCAGCAAGAGCA...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGAGGAGGAGCTGCTCTTaGTGCTGCTGCCACTGTTCT | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPRRSCS*CCCHCS Trigger: AGAACAGTGGCAGCAGCAGCAAGAGCAGCTCCTCCT...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGTGTGAGTCTCTTGTCTaGAGCTGTAGCATCTGGTGC | + |
Preference number: 4 (lower is better) Translates to: LPKPCLYHLPLSKKAHNECESLV*SCSIWC Trigger: GCACCAGATGCTACAGCTGCAGACAAGAGACTCACA...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGAACCTGGACATAGCTTaGTGCCATCTGGTGGATTTT | + |
Preference number: 4 (lower is better) Translates to: TAGLVSASSQTFSVFFLLNLDIA*CHLVDF Trigger: AAAATCCACCAGATGGCAGCAAGCTATGTCCAGGTT...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGGGTCCCGAGGTGATTTaGAGCGCTGATGTTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPGPEVI*SADVPC Trigger: GCAAGGAACATCAGCGCTCCAAATCACCTCGGGACC...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCGGTCAATCTTCACAATaGGTGGATACCTGTCATCAG | + |
Preference number: 4 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSGQSSQ*VDTCHQ Trigger: CTGATGACAGGTATCCACTCATTGTGAAGATTGACC...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCGGGGGAGGCCATGAATaGGTCATCTCTTTAAGTATT | + |
Preference number: 4 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSGGGHE*VISLSI Trigger: AATACTTAAAGAGATGACGCATTCATGGCCTCCCCC...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGAATCCCTGGAGTTGTCTaGTCCCTCACTGTTATGGTG | + |
Preference number: 4 (lower is better) Translates to: ETAGQSSLSSETGGEGVRIPGVV*SLTVMV Trigger: CACCATAACAGTGAGGGAGCAGACAACTCCAGGGAT...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGGTACTTCTTCTTCTCTaGCGTAGGTCGAGGAGAAGA | + |
Preference number: 4 (lower is better) Translates to: LPKPCLYHLPLSKKAHNEVLLLL*RRSRRR Trigger: TCTTCTCCTCGACCTACGGCAGAGAAGAAGAAGTAC...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTAGTAACTTCCAGAATTaGCTGGTGACAGTTTTGGAG | + |
Preference number: 4 (lower is better) Translates to: RVREKRQGQDTQLLDHGGSNFQN*LVTVLE Trigger: CTCCAAAACTGTCACCAGGCAATTCTGGAAGTTACT...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTCTGGACATAGCTTGCTaGCATCTGGTGGATTTTCTG | + |
Preference number: 4 (lower is better) Translates to: PKTVILSRCPWDPDTLQTLDIAC*HLVDFL Trigger: CAGAAAATCCACCAGATGGCAGCAAGCTATGTCCAG...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTAATGAAGAAACAGCCTaGGGTTTTCCAGGGCTTGAG | + |
Preference number: 4 (lower is better) Translates to: PKTVILSRCPWDPDTLQTNEETA*GFPGLE Trigger: CTCAAGCCCTGGAAAACCCCAGGCTGTTTCTTCATT...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGGTCTACAGAGGAAGCTaGGGATACTTTATGTGGGTT | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTVYRGS*GYFMWV Trigger: AACCCACATAAAGTATCCCCAGCTTCCTCTGTAGAC...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGTTTAGAGTCTCGTCCTaGGGTGGCAGAGCTCGTTTC | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPFRVSS*GGRARF Trigger: GAAACGAGCTCTGCCACCCCAGGACGAGACTCTAAA...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCCTGCTTTGTGCCTGCTaGAGGGCATGCTGGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFLLCAC*RACWQP Trigger: TGGCTGCCAGCATGCCCTCCAGCAGGCACAAAGCAG...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGATGACTCTCTGCTGCTaGATGGCTTGTGGCCTGATG | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPMTLCC*MACGLM Trigger: CATCAGGCCACAAGCCATCCAGCAGCAGAGAGTCAT...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTTCGAGGAGAAGATTTTaGTTCCTTTTTGATGTTGGG | + |
Preference number: 4 (lower is better) Translates to: RVREKRQGQDTQLLDHGGSRRRF*FLFDVG Trigger: CCCAACATCAAAAAGGAATCAAAATCTTCTCCTCGA...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGTCTCCTTCTTCAGTTTaGACAGCCTCAGGTACAATA | + |
Preference number: 4 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTSPSSV*TASGTI Trigger: TATTGTACCTGAGGCTGTTCAAACTGAAGAAGGAGA...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGTGTGGTCGTTGGTACTaGAGGCTTGGGAATTGCAAC | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPCGRWY*RLGNCN Trigger: GTTGCAATTCCCAAGCCTGCAGTACCAACGACCACA...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTGGTCTCAAACTGACAGTCCATCTTTTGTACTACTCTaGTTAGATGACTCTCTGCTG | + |
Preference number: 4 (lower is better) Translates to: LSPRVSLCRACWSQTDSPSFVLL*LDDSLL Trigger: CAGCAGAGAGTCATCTAAGCAGAGTAGTACAAAAGA...TGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCCCTCCTTGGAGCTGCTaGGACCCTTGCCTTCAGTCT | + |
Preference number: 4 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFPPWSC*DPCLQS Trigger: AGACTGAAGGCAAGGGTCCCAGCAGCTCCAAGGAGG...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCATTTTGATTCCTTTTTaGTGTTGGGTTTCCTCGAGC | + |
Preference number: 4 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSILIPF*CWVSSS Trigger: GCTCGAGGAAACCCAACATCAAAAAGGAATCAAAAT...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCGAGCTCCACCGTGTCTaGGTACATAGGGAATGGGGA | + |
Preference number: 4 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFELHRV*VHREWG Trigger: TCCCCATTCCCTATGTACTCAGACACGGTGGAGCTC...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGATGCAGGCTTGGGAATTaGAACAAGCTTTGGTATCGA | + |
Preference number: 4 (lower is better) Translates to: ETAGQSSLSSETGGEGVRCRLGN*NKLWYR Trigger: TCGATACCAAAGCTTGTTGCAATTCCCAAGCCTGCA...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCACACCACTCCGTTGGCTaGTGTGTCCACTCTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: FSSSVTLFEALTDNKVTSHHSVG*CVHSAG Trigger: CCCTGCAGAGTGGACACAGCAGCCAACGGAGTGGTG...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCGATCGAGATTTGGAGTaGTCTGAGCCGTGCTGGCCT | + |
Preference number: 4 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFDRDLE*SEPCWP Trigger: AGGCCAGCACGGCTCAGAGCACTCCAAATCTCGATC...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGAGCTCCCTCACTGTTATaGTGTGAAGGTTCAGAGTTA | + |
Preference number: 4 (lower is better) Translates to: ETAGQSSLSSETGGEGVRAPSLL*CEGSEL Trigger: TAACTCTGAACCTTCACACCATAACAGTGAGGGAGC...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTAATCTTCACAATGAGTaGATACCTGTCATCAGGCTC | + |
Preference number: 4 (lower is better) Translates to: PKTVILSRCPWDPDTLQTNLHNE*IPVIRL Trigger: GAGCCTGATGACAGGTATCCACTCATTGTGAAGATT...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGCTTTTCCCCCTTGGGTaGCTCTGTTTCTTTGTAAGG | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPLFPLG*LCFFVR Trigger: CCTTACAAAGAAACAGAGCCACCCAAGGGGGAAAAG...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGTTTCCAAGCATGCTCTaGATCCGACTTGATAACTTA | + |
Preference number: 4 (lower is better) Translates to: LPKPCLYHLPLSKKAHNEFPSML*IRLDNL Trigger: TAAGTTATCAAGTCGGATTCAGAGCATGCTTGGAAA...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGTTTCCCTTTCTTTCATaGGCAGCACATTCCGGTCTT | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPFPFLS*AAHSGL Trigger: AAGACCGGAATGTGCTGCGCATGAAAGAAAGGGAAA...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTAAAGGAGAATCCCAGTTaGCATCAGGGTCCCGAGGTG | + |
Preference number: 4 (lower is better) Translates to: SSQTFSVFFLLILLIATLKENPS*HQGPEV Trigger: CACCTCGGGACCCTGATGCCAACTGGGATTCTCCTT...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTAAGGTGTCAGTCTCTATaGTCTCCCGAGACTTCTGGG | + |
Preference number: 4 (lower is better) Translates to: SSQTFSVFFLLILLIATLRCQSL*SPETSG Trigger: CCCAGAAGTCTCGGGAGATCATAGAGACTGACACCT...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGCATTCCCACACTCAATaGAAGACACTACAGCATCAA | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPHSHTQ*KTLQHQ Trigger: TTGATGCTGTAGTGTCTTTCATTGAGTGTGGGAATG...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGCACTGTCTTCACTGCTaGTTAGTTTTAAGTCATCTT | + |
Preference number: 4 (lower is better) Translates to: LPKPCLYHLPLSKKAHNEHCLHC*LVLSHL Trigger: AAGATGACTTAAAACTAAGCAGCAGTGAAGACAGTG...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGAATTGCAACAAGCTTTaGTATCGATCTGTCTCCTAT | + |
Preference number: 4 (lower is better) Translates to: LPKPCLYHLPLSKKAHNENCNKL*YRSVSY Trigger: ATAGGAGACAGATCGATACCAAAGCTTGTTGCAATT...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCCCACTTGTTTGTTGGTaGTGGTTCAGGCTCAGGAGA | + |
Preference number: 4 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFPLVCW*WFRLRR Trigger: TCTCCTGAGCCTGAACCACCACCAACAAACAAGTGG...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGTGGGGATACTTTATGTaGGTTCACTTTATTCAACCA | + |
Preference number: 4 (lower is better) Translates to: LPKPCLYHLPLSKKAHNEWGYFM*VHFIQP Trigger: TGGTTGAATAAAGTGAACCCACATAAAGTATCCCCA...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGAATCTTTTGAAAGAATaGGCCCAGCAGGTGAAGGTA | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPNLLKE*AQQVKV Trigger: TACCTTCACCTGCTGGGCCCATTCTTTCAAAAGATT...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCAGTTGGAAGCCTTTTCTaGGGCTTGCTTCTGCACCTC | + |
Preference number: 4 (lower is better) Translates to: FSSSVTLFEALTDNKVTSVGSLF*GLLLHL Trigger: GAGGTGCAGAAGCAAGCCTCAGAAAAGGCTTCCAAC...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGTCTTGTGTTTCCTCTTaGCTTTGTTGGAAGCCTTTT | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPSCVSS*LCWKPF Trigger: AAAAGGCTTCCAACAAAGGCAAGAGGAAACACAAGA...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCAAGGAGCTGCTCTTGCTaGTGCTGCCACTGTTCTCTT | + |
Preference number: 4 (lower is better) Translates to: FSSSVTLFEALTDNKVTSRSCSC*CCHCSL Trigger: AAGAGAACAGTGGCAGCAGCAGCAAGAGCAGCTCCT...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGCTTTCTGATCCCTTTTaGATGGTTTTAGAGTCTCGT | + |
Preference number: 4 (lower is better) Translates to: KLDGICIPHPRGMSYRSPLSDPF*MVLESR Trigger: ACGAGACTCTAAAACCATCCAAAAGGGATCAGAAAG...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR TCA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTATCCAGAATTGCCTGGTaGCAGTTTTGGAGAAACAGG | + |
Preference number: 4 (lower is better) Translates to: SSQTFSVFFLLILLIATLSRIAW*QFWRNR Trigger: CCTGTTTCTCCAAAACTGTCACCAGGCAATTCTGGA...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCTTGGTACTGCAGGCTTaGGAATTGCAACAAGCTTTG | + |
Preference number: 4 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFLVLQA*ELQQAL Trigger: CAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCAA...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTACTTGCTGCCATCTGGTaGATTTTCTGTGGAATGGTC | + |
Preference number: 4 (lower is better) Translates to: SSQTFSVFFLLILLIATLLAAIW*IFCGMV Trigger: GACCATTCCACAGAAAATCCACCAGATGGCAGCAAG...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTACTACAGGAGTCCATTTaGTACTCTGATGAGATCCTC | + |
Preference number: 4 (lower is better) Translates to: SSQTFSVFFLLILLIATLLQESI*YSDEIL Trigger: GAGGATCTCATCAGAGTAGCAAATGGACTCCTGTAG...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCAGCTTCAGCTCAGTCATaGTATTACCATGAGACTGGC | + |
Preference number: 4 (lower is better) Translates to: FSSSVTLFEALTDNKVTSASAQS*YYHETG Trigger: GCCAGTCTCATGGTAATAGCATGACTGAGCTGAAGC...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCACGAAGACTCAGAAGTTaGTGTAGACGGAGGACAATT | + |
Preference number: 4 (lower is better) Translates to: FSSSVTLFEALTDNKVTSRRLRS*CRRRTI Trigger: AATTGTCCTCCGTCTACACCAACTTCTGAGTCTTCG...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCATTGCGACTCCTTAGTTaGAAAAGGGAATTTGGAAGG | + |
Preference number: 4 (lower is better) Translates to: FSSSVTLFEALTDNKVTSLRLLS*KREFGR Trigger: CCTTCCAAATTCCCTTTTCCAACTAAGGAGTCGCAA...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCATTCAGAGTTACTTCCTaGTGTACTCCTTGGCATTGT | + |
Preference number: 4 (lower is better) Translates to: FSSSVTLFEALTDNKVTSFRVTS*CTPWHC Trigger: ACAATGCCAAGGAGTACACCAGGAAGTAACTCTGAA...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CCA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCAGGATTTTCTGTGGAATaGTCACTGAAGAACCACTTG | + |
Preference number: 4 (lower is better) Translates to: FSSSVTLFEALTDNKVTSGFSVE*SLKNHL Trigger: CAAGTGGTTCTTCAGTGACCATTCCACAGAAAATCC...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR GCA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTACTCTTCCGAGAACCATaGTCTGTTTTTGAATCTTTT | + |
Preference number: 4 (lower is better) Translates to: SSQTFSVFFLLILLIATLLFREP*SVFESF Trigger: AAAAGATTCAAAAACAGAGCATGGTTCTCGGAAGAG...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 90 bp | TTTTCCTGCTACTGCTGTAGGAGTCACGGTCATGCCTCTGGCCACTaGTGCTGGCGCCACTCCCTCCTGCACCACTCCGTTGGCTGCTGT | + |
Preference number: 5 (lower is better) Translates to: FSCYCCRSHGHASGH*CWRHSLLHHSVGCC Trigger: ACAGCAGCCAACGGAGTGGTGCAGGAGGGAGTGGCGCCAGCAGCAGTGGCCAGAGGCATGACCGTGACTCCTACAGCAGTAGCAGGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 90 bp | GTCCACTCTGCAGGGCAGAGGAGCGTTTCTGAGACTGAGAGGTGCTaGGGGCGGGGCCTACAGGAGTCCATTTGCTACTCTGATGAGATC | + |
Preference number: 5 (lower is better) Translates to: VHSAGQRSVSETERC*GRGLQESICYSDEI Trigger: GATCTCATCAGAGTAGCAAATGGACTCCTGTAGGCCCCGCCCCCAGCACCTCTCAGTCTCAGAAACGCTCCTCTGCCCTGCAGAGTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 90 bp | TATTTGGAGCCTTCTCCTTGGCCTCCTTGGAGCTGCTGGGACCCTTaGCTTCAGTCTTCTTCTGCTTCGCTGTGGAGGAGGAGCTGCTCT | + |
Preference number: 5 (lower is better) Translates to: YLEPSPWPPWSCWDP*LQSSSASLWRRSCS Trigger: AGAGCAGCTCCTCCTCCACAGCGAAGCAGAAGAAGACTGAAGGCAAGGGTCCCAGCAGCTCCAAGGAGGCCAAGGAGAAGGCTCCAAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 90 bp | CAGTCTTCTTCTGCTTCGCTGTGGAGGAGGAGCTGCTCTTGCTGCTaGTGCCACTGTTCTCTTTGCTGCTGGTCCCACTGGACTTTAAGG | + |
Preference number: 5 (lower is better) Translates to: QSSSASLWRRSCSCC*CHCSLCCWSHWTLR Trigger: CCTTAAAGTCCAGTGGGACCAGCAGCAAAGAGAACAGTGGCAGCAGCAGCAAGAGCAGCTCCTCCTCCACAGCGAAGCAGAAGAAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | ACCGCTGGCCTAGTCAGTGCGTCTTCCCAGACCTTCTCAGTATTTTTCCTACTGGGTTTCCTCGAGCCCTaGGTGGCTGCTTTGTGCCTG | + |
Preference number: 5 (lower is better) Translates to: TAGLVSASSQTFSVFFLLGFLEP*VAALCL Trigger: CAGGCACAAAGCAGCCACCAAGGGCTCGAGGAAACC...CAGTAGGAAAAATACTGAGAAGGTCTGGGAAGACGCACTGACTAGGCCAGCGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 90 bp | ACCCAGAGCTGCTCTCAGATCCACTGTGGCTGCTCGAGTCATCCCTaGAGTTGTCTGCTCCCTCACTGTTATGGTGTGAAGGTTCAGAGT | + |
Preference number: 5 (lower is better) Translates to: TQSCSQIHCGCSSHP*SCLLPHCYGVKVQS Trigger: ACTCTGAACCTTCACACCATAACAGTGAGGGAGCAGACAACTCCAGGGATGACTCGAGCAGCCACAGTGGATCTGAGAGCAGCTCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000152616.3 |
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CDS CCA 90 bp | AGACTCAGAAGTTGGTGTAGACGGAGGACAATTAGAGGAGCTATTTaGAGCCTTCTCCTTGGCCTCCTTGGAGCTGCTGGGACCCTTGCC | + |
Preference number: 5 (lower is better) Translates to: RLRSWCRRRTIRGAI*SLLLGLLGAAGTLA Trigger: GGCAAGGGTCCCAGCAGCTCCAAGGAGGCCAAGGAGAAGGCTCCAAATAGCTCCTCTAATTGTCCTCCGTCTACACCAACTTCTGAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 90 bp | GGCAGTGCCCTGCTCCCGGCCTTCTTTCTTGTAGGCTTGAGAAGATaGGATGTTGCTGTCTACAGAGGAAGCTGGGGATACTTTATGTGG | + |
Preference number: 5 (lower is better) Translates to: GSALLPAFFLVGLRR*DVAVYRGSWGYFMW Trigger: CCACATAAAGTATCCCCAGCTTCCTCTGTAGACAGCAACATCCCATCTTCTCAAGCCTACAAGAAAGAAGGCCGGGAGCAGGGCACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTCTGCTGCTGGATGGCTaGTGGCCTGATGAGTTCTTG | + |
Preference number: 5 (lower is better) Translates to: RVREKRQGQDTQLLDHGGLLLDG*WPDEFL Trigger: CAAGAACTCATCAGGCCACAAGCCATCCAGCAGCAG...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTGAAGGAGAATCCCAGTaGGCATCAGGGTCCCGAGGT | + |
Preference number: 5 (lower is better) Translates to: PKTVILSRCPWDPDTLQTEGESQ*ASGSRG Trigger: ACCTCGGGACCCTGATGCCAACTGGGATTCTCCTTC...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTGAGCTGCTGGGACCCTaGCCTTCAGTCTTCTTCTGC | + |
Preference number: 5 (lower is better) Translates to: PKTVILSRCPWDPDTLQTELLGP*PSVFFC Trigger: GCAGAAGAAGACTGAAGGCAAGGGTCCCAGCAGCTC...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 90 bp | TGGCTGCTCGAGTCATCCCTGGAGTTGTCTGCTCCCTCACTGTTATaGTGTGAAGGTTCAGAGTTACTTCCTGGTGTACTCCTTGGCATT | + |
Preference number: 5 (lower is better) Translates to: WLLESSLELSAPSLL*CEGSELLPGVLLGI Trigger: AATGCCAAGGAGTACACCAGGAAGTAACTCTGAACCTTCACACCATAACAGTGAGGGAGCAGACAACTCCAGGGATGACTCGAGCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000152616.3 |
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CDS-3UTR CAA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGCTTGAGGATCGAGATTaGGAGTGCTCTGAGCCGTGC | + |
Preference number: 5 (lower is better) Translates to: LPKPCLYHLPLSKKAHNELEDRD*ECSEPC Trigger: GCACGGCTCAGAGCACTCCAAATCTCGATCCTCAAG...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGTCCACTGAGGAGGGTTaGACAGGAGTCCTGTTGCTT | + |
Preference number: 5 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTSTEEG*TGVLLL Trigger: AAGCAACAGGACTCCTGTCAAACCCTCCTCAGTGGA...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTGGAAAGCTGTTCAGCTaGGTCCCAAATTTCTGTGGC | + |
Preference number: 5 (lower is better) Translates to: RVREKRQGQDTQLLDHGGGKLFS*VPNFCG Trigger: GCCACAGAAATTTGGGACCAAGCTGAACAGCTTTCC...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 90 bp | ATGCAGTCCCTGCCGGGTGTAACGAGCCAGATCTGTCATGATGCTTaGATTAAAGATGAGAGGGCCCATCACTTTGTCCAGTTCAGCAAA | + |
Preference number: 5 (lower is better) Translates to: MQSLPGVTSQICHDA*IKDERAHHFVQFSK Trigger: TTTGCTGAACTGGACAAAGTGATGGGCCCTCTCATCTTTAATGCAAGCATCATGACAGATCTGGCTCGTTACACCCGGCAGGGACTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCTCACTGAAGAACCACTaGCTGAAGCACTACTTCCCC | + |
Preference number: 5 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSSLKNH*LKHYFP Trigger: GGGGAAGTAGTGCTTCAGCAAGTGGTTCTTCAGTGA...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS TCA 90 bp | GTCAGTCTCTATGATCTCCCGAGACTTCTGGGACGGTTTACTGGCTaGCTTGTACTTCTTCTTCTCTGCCGTAGGTCGAGGAGAAGATTT | + |
Preference number: 5 (lower is better) Translates to: VSLYDLPRLLGRFTG*LVLLLLCRRSRRRF Trigger: AAATCTTCTCCTCGACCTACGGCAGAGAAGAAGAAGTACAAGTCAGCCAGTAAACCGTCCCAGAAGTCTCGGGAGATCATAGAGACTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS TCA 90 bp | CTGTTCTCTTTGCTGCTGGTCCCACTGGACTTTAAGGACGACGACTaGCTGACAGTCCTCTTCCGAGAACCATGCTCTGTTTTTGAATCT | + |
Preference number: 5 (lower is better) Translates to: LFSLLLVPLDFKDDD*LTVLFREPCSVFES Trigger: AGATTCAAAAACAGAGCATGGTTCTCGGAAGAGGACTGTCAGTCAGTCGTCGTCCTTAAAGTCCAGTGGGACCAGCAGCAAAGAGAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGGTTGGTACTGCAGGCTaGGGAATTGCAACAAGCTTT | + |
Preference number: 5 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTVGTAG*GIATSF Trigger: AAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCAAC...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | GAGACTGCAGGACAAAGTTCACTATCTTCAGAAACAGGTGGTGAAGGAGTCAGAGAGTCATCCCTGGAGTaGTCTGCTCCCTCACTGTTA | + |
Preference number: 5 (lower is better) Translates to: ETAGQSSLSSETGGEGVRESSLE*SAPSLL Trigger: TAACAGTGAGGGAGCAGACAACTCCAGGGATGACTC...TCTGACTCCTTCACCACCTGTTTCTGAAGATAGTGAACTTTGTCCTGCAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGCAAGTTGCCACTTGTTaGTTGGTGGTGGTTCAGGCT | + |
Preference number: 5 (lower is better) Translates to: LPKPCLYHLPLSKKAHNEQVATC*LVVVQA Trigger: AGCCTGAACCACCACCAACAAACAAGTGGCAACTTG...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGTTCCTCTTGCCTTTGTaGGAAGCCTTTTCTGAGGCT | + |
Preference number: 5 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTFLLPL*EAFSEA Trigger: AGCCTCAGAAAAGGCTTCCAACAAAGGCAAGAGGAA...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS TCA 90 bp | TCTCTTTGCTGCTGGTCCCACTGGACTTTAAGGACGACGACTGACTaGCAGTCCTCTTCCGAGAACCATGCTCTGTTTTTGAATCTTTTG | + |
Preference number: 5 (lower is better) Translates to: SLCCWSHWTLRTTTD*QSSSENHALFLNLL Trigger: CAAAAGATTCAAAAACAGAGCATGGTTCTCGGAAGAGGACTGTCAGTCAGTCGTCGTCCTTAAAGTCCAGTGGGACCAGCAGCAAAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 90 bp | ATCAAAGGCAAGCTTTGTTCTCCGAGGCTTCGAAGACTCAGAAGTTaGTGTAGACGGAGGACAATTAGAGGAGCTATTTGGAGCCTTCTC | + |
Preference number: 5 (lower is better) Translates to: IKGKLCSPRLRRLRS*CRRRTIRGAIWSLL Trigger: GAGAAGGCTCCAAATAGCTCCTCTAATTGTCCTCCGTCTACACCAACTTCTGAGTCTTCGAAGCCTCGGAGAACAAAGCTTGCCTTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | AGAGTGAGAGAGAAGAGGCAAGGACAGGACACACAGCTGTTAGACCATGGAGGTGTGTACTCCTTGGCATaGTCTTATCACAATCCTGTT | + |
Preference number: 5 (lower is better) Translates to: RVREKRQGQDTQLLDHGGVYSLA*SYHNPV Trigger: AACAGGATTGTGATAAGACAATGCCAAGGAGTACAC...ACCTCCATGGTCTAACAGCTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCACTCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CTTCCTAAGCCCTGTCTCTATCATCTCCCCCTTTCCAAGAAAGCTCACAATGAGTTGACAGGAGTCCTGTaGCTTTCAGGGTACTTAGGA | + |
Preference number: 5 (lower is better) Translates to: LPKPCLYHLPLSKKAHNELTGVL*LSGYLG Trigger: TCCTAAGTACCCTGAAAGCAACAGGACTCCTGTCAA...CTCATTGTGAGCTTTCTTGGAAAGGGGGAGATGATAGAGACAGGGCTTAGGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTGGTCTCAAACTGACAGTCCACTGTTTTTGAATCTTTaGAAAGAATGGGCCCAGCAG | + |
Preference number: 5 (lower is better) Translates to: LSPRVSLCRACWSQTDSPLFLNL*KEWAQQ Trigger: CTGCTGGGCCCATTCTTTCAAAAGATTCAAAAACAG...TGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTGGTCTCAAACTGACAGTCCAGTTGGAAAAGGGAATTaGGAAGGTTCTGTTTTGCAT | + |
Preference number: 5 (lower is better) Translates to: LSPRVSLCRACWSQTDSPVGKGN*EGSVLH Trigger: ATGCAAAACAGAACCTTCCAAATTCCCTTTTCCAAC...TGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CTTTCTCCCAGGGTCTCTCTGTGTAGAGCATGCTGGTCTCAAACTGACAGTCCAAGTACTGTATCTTTTTaGTTCTCCAGGGCCAAAGTT | + |
Preference number: 5 (lower is better) Translates to: LSPRVSLCRACWSQTDSPSTVSF*FSRAKV Trigger: AACTTTGGCCCTGGAGAACAAAAAAGATACAGTACT...TGGACTGTCAGTTTGAGACCAGCATGCTCTACACAGAGAGACCCTGGGAGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | CAGCACAGTCAAAACCAAGTATCATTAGGACTTCTGGGTGGGAGCTTGTCCACGTTATCAAGTTGCCACTaGTTTGTTGGTGGTGGTTCA | + |
Preference number: 5 (lower is better) Translates to: QHSQNQVSLGLLGGSLSTLSSCH*FVGGGS Trigger: TGAACCACCACCAACAAACAAGTGGCAACTTGATAA...CGTGGACAAGCTCCCACCCAGAAGTCCTAATGATACTTGGTTTTGACTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCACCCTTGGTGGCTGCTTaGTGCCTGCTGGAGGGCATG | + |
Preference number: 5 (lower is better) Translates to: FSSSVTLFEALTDNKVTSPLVAA*CLLEGM Trigger: CATGCCCTCCAGCAGGCACAAAGCAGCCACCAAGGG...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTATTCTCCTTGGCCTCCTaGGAGCTGCTGGGACCCTTG | + |
Preference number: 5 (lower is better) Translates to: SSQTFSVFFLLILLIATLFSLAS*ELLGPL Trigger: CAAGGGTCCCAGCAGCTCCAAGGAGGCCAAGGAGAA...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | GATCAGCAACAAGCTCAACTATATGGACACCATGGCACTGGTGTGAAAGGCAGCTTCTCCTTCTTCAGTTaGAACAGCCTCAGGTACAAT | + |
Preference number: 5 (lower is better) Translates to: DQQQAQLYGHHGTGVKGSFSFFS*NSLRYN Trigger: ATTGTACCTGAGGCTGTTCAAACTGAAGAAGGAGAA...GCTGCCTTTCACACCAGTGCCATGGTGTCCATATAGTTGAGCTTGTTGCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 90 bp | GTTTGCTTTCTCGTCTGTGGTCGTTGGTACTGCAGGCTTGGGAATTaGAACAAGCTTTGGTATCGATCTGTCTCCTATGTAATCCTTCAT | + |
Preference number: 5 (lower is better) Translates to: VCFLVCGRWYCRLGN*NKLWYRSVSYVILH Trigger: ATGAAGGATTACATAGGAGACAGATCGATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCAACGACCACAGACGAGAAAGCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000153821.2 |
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CDS-3UTR CAA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGAGTACTGTGAGTCTCTaGTCTGCAGCTGTAGCATCT | + |
Preference number: 5 (lower is better) Translates to: KLDGICIPHPRGMSYRSPSTVSL*SAAVAS Trigger: AGATGCTACAGCTGCAGACAAGAGACTCACAGTACT...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCTGCCTGGTGACAGTTTaGGAGAAACAGGGGAGGGCA | + |
Preference number: 5 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFCLVTV*EKQGRA Trigger: TGCCCTCCCCTGTTTCTCCAAAACTGTCACCAGGCA...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS TCA 90 bp | ACTTGGATTCCTGAGCGTTCTTCTCTAATGCATTCCCACACTCAATaGAAGACACTACAGCATCAAGGTAGTACACGGCTTTCTCAAACC | + |
Preference number: 5 (lower is better) Translates to: TWIPERSSLMHSHTQ*KTLQHQGSTRLSQT Trigger: GGTTTGAGAAAGCCGTGTACTACCTTGATGCTGTAGTGTCTTTCATTGAGTGTGGGAATGCATTAGAGAAGAACGCTCAGGAATCCAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 90 bp | GTCTGTGGTCGTTGGTACTGCAGGCTTGGGAATTGCAACAAGCTTTaGTATCGATCTGTCTCCTATGTAATCCTTCATTTCATCGTAGTT | + |
Preference number: 5 (lower is better) Translates to: VCGRWYCRLGNCNKL*YRSVSYVILHFIVV Trigger: AACTACGATGAAATGAAGGATTACATAGGAGACAGATCGATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCAACGACCACAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000153821.2 |
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CDS CCA 90 bp | AATTTGGGTTTGCTTTCTCGTCTGTGGTCGTTGGTACTGCAGGCTTaGGAATTGCAACAAGCTTTGGTATCGATCTGTCTCCTATGTAAT | + |
Preference number: 5 (lower is better) Translates to: NLGLLSRLWSLVLQA*ELQQALVSICLLCN Trigger: ATTACATAGGAGACAGATCGATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCAACGACCACAGACGAGAAAGCAAACCCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000153821.2 |
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CDS-3UTR CAA 90 bp | CCTAAAACAGTCATCCTCAGTAGATGTCCTTGGGACCCAGACACCTTACAGACTATTCGAGTCAGAAGATaGAGGTCAATCTTCACAATG | + |
Preference number: 5 (lower is better) Translates to: PKTVILSRCPWDPDTLQTIRVRR*RSIFTM Trigger: CATTGTGAAGATTGACCTCAATCTTCTGACTCGAAT...AGTCTGTAAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 90 bp | TTCTTGTGTTTCCTCTTGCCTTTGTTGGAAGCCTTTTCTGAGGCTTaGTTCTGCACCTCTCTCGAGTGTTTCTCTGGAACATTTTTCTTT | + |
Preference number: 5 (lower is better) Translates to: FLCFLLPLLEAFSEA*FCTSLECFSGTFFF Trigger: AAAGAAAAATGTTCCAGAGAAACACTCGAGAGAGGTGCAGAAGCAAGCCTCAGAAAAGGCTTCCAACAAAGGCAAGAGGAAACACAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTACTGCAGGCTTGGGAATaGCAACAAGCTTTGGTATCG | + |
Preference number: 5 (lower is better) Translates to: SSQTFSVFFLLILLIATLLQAWE*QQALVS Trigger: CGATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAG...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCAGTTGCCACTTGTTTGTaGGTGGTGGTTCAGGCTCAG | + |
Preference number: 5 (lower is better) Translates to: FSSSVTLFEALTDNKVTSVATCL*VVVQAQ Trigger: CTGAGCCTGAACCACCACCAACAAACAAGTGGCAAC...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGGATTTTGATTCCTTTTaGATGTTGGGTTTCCTCGAG | + |
Preference number: 5 (lower is better) Translates to: KLDGICIPHPRGMSYRSPDFDSF*MLGFLE Trigger: CTCGAGGAAACCCAACATCAAAAAGGAATCAAAATC...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTACATCAAAGGCAAGCTTaGTTCTCCGAGGCTTCGAAG | + |
Preference number: 5 (lower is better) Translates to: SSQTFSVFFLLILLIATLHQRQA*FSEASK Trigger: CTTCGAAGCCTCGGAGAACAAAGCTTGCCTTTGATG...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | AAGCTGGATGGGATTTGTATTCCACATCCTAGAGGAATGAGTTATAGGAGTCCGGATAACTTATCTTCTTaGCTAGTGACTTTGTATGGC | + |
Preference number: 5 (lower is better) Translates to: KLDGICIPHPRGMSYRSPDNLSS*LVTLYG Trigger: GCCATACAAAGTCACTAGCAAAGAAGATAAGTTATC...CGGACTCCTATAACTCATTCCTCTAGGATGTGGAATACAAATCCCATCCAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTAAGAGGGCCCATCACTTaGTCCAGTTCAGCAAAGAAT | + |
Preference number: 5 (lower is better) Translates to: SSQTFSVFFLLILLIATLRGPIT*SSSAKN Trigger: ATTCTTTGCTGAACTGGACAAAGTGATGGGCCCTCT...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCCAACCAATTATCAAGTaGCCACTTGTTTGTTGGTGG | + |
Preference number: 5 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFQPIIK*PLVCWW Trigger: CCACCAACAAACAAGTGGCAACTTGATAATTGGTTG...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTATCTTTGCTAGTGACTTaGTATGGCTCAGCAAAGAGA | + |
Preference number: 5 (lower is better) Translates to: SSQTFSVFFLLILLIATLSLLVT*YGSAKR Trigger: TCTCTTTGCTGAGCCATACAAAGTCACTAGCAAAGA...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTATTCTTTCTTGTAGGCTaGAGAAGATGGGATGTTGCT | + |
Preference number: 5 (lower is better) Translates to: SSQTFSVFFLLILLIATLFFLVG*RRWDVA Trigger: AGCAACATCCCATCTTCTCAAGCCTACAAGAAAGAA...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCATGTTTCCTCTTGCCTTaGTTGGAAGCCTTTTCTGAG | + |
Preference number: 5 (lower is better) Translates to: FSSSVTLFEALTDNKVTSCFLLP*LEAFSE Trigger: CTCAGAAAAGGCTTCCAACAAAGGCAAGAGGAAACA...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | AAATTAATTTTCTCCACATTAGACATTGGGACACCTCCTTTCAAGCTCCAGTTCGTATCATCATCATTCTaGTGTTTCCTCTTGCCTTTG | + |
Preference number: 5 (lower is better) Translates to: KLIFSTLDIGTPPFKLQFVSSSF*CFLLPL Trigger: CAAAGGCAAGAGGAAACACAAGAATGATGATGATAC...GAACTGGAGCTTGAAAGGAGGTGTCCCAATGTCTAATGTGGAGAAAATTAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCAGAATTGCAACAAGCTTaGGTATCGATCTGTCTCCTA | + |
Preference number: 5 (lower is better) Translates to: FSSSVTLFEALTDNKVTSELQQA*VSICLL Trigger: TAGGAGACAGATCGATACCAAAGCTTGTTGCAATTC...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TTCAGCAGCTCTGTGACTTTATTTGAAGCACTTACAGATAATAAAGTGACTTCATTCTTGTGTTTCCTCTaGCCTTTGTTGGAAGCCTTT | + |
Preference number: 5 (lower is better) Translates to: FSSSVTLFEALTDNKVTSFLCFL*PLLEAF Trigger: AAAGGCTTCCAACAAAGGCAAGAGGAAACACAAGAA...TGAAGTCACTTTATTATCTGTAAGTGCTTCAAATAAAGTCACAGAGCTGCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS-3UTR CAA 90 bp | TCTTCCCAGACCTTCTCAGTATTTTTCCTACTGATTTTACTCATAGCAACACTAAATTCTTTTTGTTCTTaGGAAAGCTGTTCAGCTTGG | + |
Preference number: 5 (lower is better) Translates to: SSQTFSVFFLLILLIATLNSFCS*ESCSAW Trigger: CCAAGCTGAACAGCTTTCCAAAGAACAAAAAGAATT...TAGTGTTGCTATGAGTAAAATCAGTAGGAAAAATACTGAGAAGGTCTGGGAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 72 bp | CTGCTGCTGGCGCCACTCCCTCCTGCACCACTCCGTTaGCTGCTGTGTCCACTCTGCAGGGCAGAGGAGCGT | + |
Preference number: 6 (lower is better) Translates to: LLLAPLPPAPLR*LLCPLCRAEER Trigger: ACGCTCCTCTGCCCTGCAGAGTGGACACAGCAGCCAACGGAGTGGTGCAGGAGGGAGTGGCGCCAGCAGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 72 bp | TGTAGGAGTCACGGTCATGCCTCTGGCCACTGCTGCTaGCGCCACTCCCTCCTGCACCACTCCGTTGGCTGC | + |
Preference number: 6 (lower is better) Translates to: CRSHGHASGHCC*RHSLLHHSVGC Trigger: GCAGCCAACGGAGTGGTGCAGGAGGGAGTGGCGCCAGCAGCAGTGGCCAGAGGCATGACCGTGACTCCTACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 72 bp | TACTGCTGTAGGAGTCACGGTCATGCCTCTGGCCACTaGTGCTGGCGCCACTCCCTCCTGCACCACTCCGTT | + |
Preference number: 6 (lower is better) Translates to: YCCRSHGHASGH*CWRHSLLHHSV Trigger: AACGGAGTGGTGCAGGAGGGAGTGGCGCCAGCAGCAGTGGCCAGAGGCATGACCGTGACTCCTACAGCAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 72 bp | TCTGCAGGGCAGAGGAGCGTTTCTGAGACTGAGAGGTaGTGGGGGCGGGGCCTACAGGAGTCCATTTGCTAC | + |
Preference number: 6 (lower is better) Translates to: SAGQRSVSETER*WGRGLQESICY Trigger: GTAGCAAATGGACTCCTGTAGGCCCCGCCCCCAGCACCTCTCAGTCTCAGAAACGCTCCTCTGCCCTGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 72 bp | GCAGGGCAGAGGAGCGTTTCTGAGACTGAGAGGTGCTaGGGGCGGGGCCTACAGGAGTCCATTTGCTACTCT | + |
Preference number: 6 (lower is better) Translates to: AGQRSVSETERC*GRGLQESICYS Trigger: AGAGTAGCAAATGGACTCCTGTAGGCCCCGCCCCCAGCACCTCTCAGTCTCAGAAACGCTCCTCTGCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 72 bp | GCTTCGCTGTGGAGGAGGAGCTGCTCTTGCTGCTGCTaGCACTGTTCTCTTTGCTGCTGGTCCCACTGGACT | + |
Preference number: 6 (lower is better) Translates to: ASLWRRSCSCCC*HCSLCCWSHWT Trigger: AGTCCAGTGGGACCAGCAGCAAAGAGAACAGTGGCAGCAGCAGCAAGAGCAGCTCCTCCTCCACAGCGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 90 bp | CTATTTGGAGCCTTCTCCTTGGCCTCCTTGGAGCTGCTGGGACCCTaGCCTTCAGTCTTCTTCTGCTTCGCTGTGGAGGAGGAGCTGCTC | + |
Preference number: 6 (lower is better) Translates to: LFGAFSLASLELLGP*PSVFFCFAVEEELL Trigger: GAGCAGCTCCTCCTCCACAGCGAAGCAGAAGAAGACTGAAGGCAAGGGTCCCAGCAGCTCCAAGGAGGCCAAGGAGAAGGCTCCAAATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 72 bp | AGTCAGACCCAGAGCTGCTCTCAGATCCACTGTGGCTaGTCGAGTCATCCCTGGAGTTGTCTGCTCCCTCAC | + |
Preference number: 6 (lower is better) Translates to: SQTQSCSQIHCG*SSHPWSCLLPH Trigger: GTGAGGGAGCAGACAACTCCAGGGATGACTCGAGCAGCCACAGTGGATCTGAGAGCAGCTCTGGGTCTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000152616.3 |
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CDS GCA 72 bp | TCTTCTGCTTCGCTGTGGAGGAGGAGCTGCTCTTGCTaGTGCTGCCACTGTTCTCTTTGCTGCTGGTCCCAC | + |
Preference number: 6 (lower is better) Translates to: SSASLWRRSCSC*CCHCSLCCWSH Trigger: GTGGGACCAGCAGCAAAGAGAACAGTGGCAGCAGCAGCAAGAGCAGCTCCTCCTCCACAGCGAAGCAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 72 bp | TTGGAGCTGCTGGGACCCTTGCCTTCAGTCTTCTTCTaGTTCGCTGTGGAGGAGGAGCTGCTCTTGCTGCTG | + |
Preference number: 6 (lower is better) Translates to: LELLGPLPSVFF*FAVEEELLLLL Trigger: CAGCAGCAAGAGCAGCTCCTCCTCCACAGCGAAGCAGAAGAAGACTGAAGGCAAGGGTCCCAGCAGCTCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 72 bp | GAGAGGTGCTGGGGGCGGGGCCTACAGGAGTCCATTTaGTACTCTGATGAGATCCTCCATGTCTCTGCTCAA | + |
Preference number: 6 (lower is better) Translates to: ERCWGRGLQESI*YSDEILHVSAQ Trigger: TTGAGCAGAGACATGGAGGATCTCATCAGAGTAGCAAATGGACTCCTGTAGGCCCCGCCCCCAGCACCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000153821.2 |
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CDS GCA 72 bp | TTTGTTGGTGGTGGTTCAGGCTCAGGAGATGCGCTCTaGGACGGCTCATTAGCCTCACTGTCACTGGAGCTG | + |
Preference number: 6 (lower is better) Translates to: FVGGGSGSGDAL*DGSLASLSLEL Trigger: CAGCTCCAGTGACAGTGAGGCTAATGAGCCGTCGCAGAGCGCATCTCCTGAGCCTGAACCACCACCAACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 72 bp | TATTTGGAGCCTTCTCCTTGGCCTCCTTGGAGCTGCTaGGACCCTTGCCTTCAGTCTTCTTCTGCTTCGCTG | + |
Preference number: 6 (lower is better) Translates to: YLEPSPWPPWSC*DPCLQSSSASL Trigger: CAGCGAAGCAGAAGAAGACTGAAGGCAAGGGTCCCAGCAGCTCCAAGGAGGCCAAGGAGAAGGCTCCAAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS TCA 72 bp | CTGTGCAGGAGACTTCTGCCTCCCACGGCCACTTTCTaGTCCCTTTTGGATGGTTTTAGAGTCTCGTCCTGG | + |
Preference number: 6 (lower is better) Translates to: LCRRLLPPTATF*SLLDGFRVSSW Trigger: CCAGGACGAGACTCTAAAACCATCCAAAAGGGATCAGAAAGTGGCCGTGGGAGGCAGAAGTCTCCTGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 72 bp | TGCTCTCAGATCCACTGTGGCTGCTCGAGTCATCCCTaGAGTTGTCTGCTCCCTCACTGTTATGGTGTGAAG | + |
Preference number: 6 (lower is better) Translates to: CSQIHCGCSSHP*SCLLPHCYGVK Trigger: CTTCACACCATAACAGTGAGGGAGCAGACAACTCCAGGGATGACTCGAGCAGCCACAGTGGATCTGAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000152616.3 |
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CDS CAA 90 bp | GTAGTTACTGGCAGTGCCCTGCTCCCGGCCTTCTTTCTTGTAGGCTaGAGAAGATGGGATGTTGCTGTCTACAGAGGAAGCTGGGGATAC | + |
Preference number: 6 (lower is better) Translates to: VVTGSALLPAFFLVG*RRWDVAVYRGSWGY Trigger: GTATCCCCAGCTTCCTCTGTAGACAGCAACATCCCATCTTCTCAAGCCTACAAGAAAGAAGGCCGGGAGCAGGGCACTGCCAGTAACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 90 bp | AAGCTATCTTCTTCCTCCACTGAGGAGGGTTTGACAGGAGTCCTGTaGCTTTCAGGGTACTTAGGAGTCTGTGAGGAGGGAGGCAGGCTC | + |
Preference number: 6 (lower is better) Translates to: KLSSSSTEEGLTGVL*LSGYLGVCEEGGRL Trigger: GAGCCTGCCTCCCTCCTCACAGACTCCTAAGTACCCTGAAAGCAACAGGACTCCTGTCAAACCCTCCTCAGTGGAGGAAGAAGATAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS TCA 72 bp | TTGCTGCTGGTCCCACTGGACTTTAAGGACGACGACTaGCTGACAGTCCTCTTCCGAGAACCATGCTCTGTT | + |
Preference number: 6 (lower is better) Translates to: LLLVPLDFKDDD*LTVLFREPCSV Trigger: AACAGAGCATGGTTCTCGGAAGAGGACTGTCAGTCAGTCGTCGTCCTTAAAGTCCAGTGGGACCAGCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 72 bp | CTGCTCCCGGCCTTCTTTCTTGTAGGCTTGAGAAGATaGGATGTTGCTGTCTACAGAGGAAGCTGGGGATAC | + |
Preference number: 6 (lower is better) Translates to: LLPAFFLVGLRR*DVAVYRGSWGY Trigger: GTATCCCCAGCTTCCTCTGTAGACAGCAACATCCCATCTTCTCAAGCCTACAAGAAAGAAGGCCGGGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 72 bp | TTTGATTCCTTTTTGATGTTGGGTTTCCTCGAGCCCTaGGTGGCTGCTTTGTGCCTGCTGGAGGGCATGCTG | + |
Preference number: 6 (lower is better) Translates to: FDSFLMLGFLEP*VAALCLLEGML Trigger: CAGCATGCCCTCCAGCAGGCACAAAGCAGCCACCAAGGGCTCGAGGAAACCCAACATCAAAAAGGAATCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 90 bp | TTCTCTGCCGTAGGTCGAGGAGAAGATTTTGATTCCTTTTTGATGTaGGGTTTCCTCGAGCCCTTGGTGGCTGCTTTGTGCCTGCTGGAG | + |
Preference number: 6 (lower is better) Translates to: FSAVGRGEDFDSFLM*GFLEPLVAALCLLE Trigger: CTCCAGCAGGCACAAAGCAGCCACCAAGGGCTCGAGGAAACCCAACATCAAAAAGGAATCAAAATCTTCTCCTCGACCTACGGCAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS TCA 72 bp | TGCTGGTCCCACTGGACTTTAAGGACGACGACTGACTaGCAGTCCTCTTCCGAGAACCATGCTCTGTTTTTG | + |
Preference number: 6 (lower is better) Translates to: CWSHWTLRTTTD*QSSSENHALFL Trigger: CAAAAACAGAGCATGGTTCTCGGAAGAGGACTGTCAGTCAGTCGTCGTCCTTAAAGTCCAGTGGGACCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 72 bp | ATCTCCCGAGACTTCTGGGACGGTTTACTGGCTGACTaGTACTTCTTCTTCTCTGCCGTAGGTCGAGGAGAA | + |
Preference number: 6 (lower is better) Translates to: ISRDFWDGLLAD*YFFFSAVGRGE Trigger: TTCTCCTCGACCTACGGCAGAGAAGAAGAAGTACAAGTCAGCCAGTAAACCGTCCCAGAAGTCTCGGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 72 bp | GAGTCATCCCTGGAGTTGTCTGCTCCCTCACTGTTATaGTGTGAAGGTTCAGAGTTACTTCCTGGTGTACTC | + |
Preference number: 6 (lower is better) Translates to: ESSLELSAPSLL*CEGSELLPGVL Trigger: GAGTACACCAGGAAGTAACTCTGAACCTTCACACCATAACAGTGAGGGAGCAGACAACTCCAGGGATGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000152616.3 |
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CDS CCA 72 bp | GACGAGGTGTCAGTCTCTATGATCTCCCGAGACTTCTaGGACGGTTTACTGGCTGACTTGTACTTCTTCTTC | + |
Preference number: 6 (lower is better) Translates to: DEVSVSMISRDF*DGLLADLYFFF Trigger: GAAGAAGAAGTACAAGTCAGCCAGTAAACCGTCCCAGAAGTCTCGGGAGATCATAGAGACTGACACCTCGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 72 bp | TCTGCCGTAGGTCGAGGAGAAGATTTTGATTCCTTTTaGATGTTGGGTTTCCTCGAGCCCTTGGTGGCTGCT | + |
Preference number: 6 (lower is better) Translates to: SAVGRGEDFDSF*MLGFLEPLVAA Trigger: AGCAGCCACCAAGGGCTCGAGGAAACCCAACATCAAAAAGGAATCAAAATCTTCTCCTCGACCTACGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 72 bp | CTACTCTGCTTAGATGACTCTCTGCTGCTGGATGGCTaGTGGCCTGATGAGTTCTTGTCCTCTGTTTTGGGT | + |
Preference number: 6 (lower is better) Translates to: LLCLDDSLLLDG*WPDEFLSSVLG Trigger: ACCCAAAACAGAGGACAAGAACTCATCAGGCCACAAGCCATCCAGCAGCAGAGAGTCATCTAAGCAGAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 90 bp | TTCTTCTTCTCTGCCGTAGGTCGAGGAGAAGATTTTGATTCCTTTTaGATGTTGGGTTTCCTCGAGCCCTTGGTGGCTGCTTTGTGCCTG | + |
Preference number: 6 (lower is better) Translates to: FFFSAVGRGEDFDSF*MLGFLEPLVAALCL Trigger: CAGGCACAAAGCAGCCACCAAGGGCTCGAGGAAACCCAACATCAAAAAGGAATCAAAATCTTCTCCTCGACCTACGGCAGAGAAGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 72 bp | TTCCTCTTGCCTTTGTTGGAAGCCTTTTCTGAGGCTTaGTTCTGCACCTCTCTCGAGTGTTTCTCTGGAACA | + |
Preference number: 6 (lower is better) Translates to: FLLPLLEAFSEA*FCTSLECFSGT Trigger: TGTTCCAGAGAAACACTCGAGAGAGGTGCAGAAGCAAGCCTCAGAAAAGGCTTCCAACAAAGGCAAGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 72 bp | TTGCTTTCTCGTCTGTGGTCGTTGGTACTGCAGGCTTaGGAATTGCAACAAGCTTTGGTATCGATCTGTCTC | + |
Preference number: 6 (lower is better) Translates to: LLSRLWSLVLQA*ELQQALVSICL Trigger: GAGACAGATCGATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCAACGACCACAGACGAGAAAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000153821.2 |
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CDS CAA 72 bp | GTAGGTCGAGGAGAAGATTTTGATTCCTTTTTGATGTaGGGTTTCCTCGAGCCCTTGGTGGCTGCTTTGTGC | + |
Preference number: 6 (lower is better) Translates to: VGRGEDFDSFLM*GFLEPLVAALC Trigger: GCACAAAGCAGCCACCAAGGGCTCGAGGAAACCCAACATCAAAAAGGAATCAAAATCTTCTCCTCGACCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 90 bp | GTCTCTATGATCTCCCGAGACTTCTGGGACGGTTTACTGGCTGACTaGTACTTCTTCTTCTCTGCCGTAGGTCGAGGAGAAGATTTTGAT | + |
Preference number: 6 (lower is better) Translates to: VSMISRDFWDGLLAD*YFFFSAVGRGEDFD Trigger: ATCAAAATCTTCTCCTCGACCTACGGCAGAGAAGAAGAAGTACAAGTCAGCCAGTAAACCGTCCCAGAAGTCTCGGGAGATCATAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 90 bp | CTGCCATCTGGTGGATTTTCTGTGGAATGGTCACTGAAGAACCACTaGCTGAAGCACTACTTCCCCCAGAAGAGTAACTTCCAGAATTGC | + |
Preference number: 6 (lower is better) Translates to: LPSGGFSVEWSLKNH*LKHYFPQKSNFQNC Trigger: GCAATTCTGGAAGTTACTCTTCTGGGGGAAGTAGTGCTTCAGCAAGTGGTTCTTCAGTGACCATTCCACAGAAAATCCACCAGATGGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 90 bp | GGTTTGCTTTCTCGTCTGTGGTCGTTGGTACTGCAGGCTTGGGAATaGCAACAAGCTTTGGTATCGATCTGTCTCCTATGTAATCCTTCA | + |
Preference number: 6 (lower is better) Translates to: GLLSRLWSLVLQAWE*QQALVSICLLCNPS Trigger: TGAAGGATTACATAGGAGACAGATCGATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCAACGACCACAGACGAGAAAGCAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000153821.2 |
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CDS TCA 72 bp | GTGTCTGAGTACATAGGGAATGGGGACTTGGATTCCTaGGCGTTCTTCTCTAATGCATTCCCACACTCAATG | + |
Preference number: 6 (lower is better) Translates to: VSEYIGNGDLDS*AFFSNAFPHSM Trigger: CATTGAGTGTGGGAATGCATTAGAGAAGAACGCTCAGGAATCCAAGTCCCCATTCCCTATGTACTCAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 72 bp | ATTTGGGTTTGCTTTCTCGTCTGTGGTCGTTGGTACTaGAGGCTTGGGAATTGCAACAAGCTTTGGTATCGA | + |
Preference number: 6 (lower is better) Translates to: IWVCFLVCGRWY*RLGNCNKLWYR Trigger: TCGATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCAACGACCACAGACGAGAAAGCAAACCCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000153821.2 |
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CDS CCA 72 bp | AAGCTTTGTTCTCCGAGGCTTCGAAGACTCAGAAGTTaGTGTAGACGGAGGACAATTAGAGGAGCTATTTGG | + |
Preference number: 6 (lower is better) Translates to: KLCSPRLRRLRS*CRRRTIRGAIW Trigger: CCAAATAGCTCCTCTAATTGTCCTCCGTCTACACCAACTTCTGAGTCTTCGAAGCCTCGGAGAACAAAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 72 bp | TTTGCTTTCTCGTCTGTGGTCGTTGGTACTGCAGGCTaGGGAATTGCAACAAGCTTTGGTATCGATCTGTCT | + |
Preference number: 6 (lower is better) Translates to: FAFSSVVVGTAG*GIATSFGIDLS Trigger: AGACAGATCGATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCAACGACCACAGACGAGAAAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000153821.2 |
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CDS CAA 72 bp | CTGGCTCGGGTATCATCATCATTCTTGTGTTTCCTCTaGCCTTTGTTGGAAGCCTTTTCTGAGGCTTGCTTC | + |
Preference number: 6 (lower is better) Translates to: LARVSSSFLCFL*PLLEAFSEACF Trigger: GAAGCAAGCCTCAGAAAAGGCTTCCAACAAAGGCAAGAGGAAACACAAGAATGATGATGATACCCGAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 72 bp | GAATTCTTCAGGTGCTCAGTTAGCGTCTTGGAGTACTaGAGAGCGTTCTCCTTCTTCAGTTTGAACAGCCTC | + |
Preference number: 6 (lower is better) Translates to: EFFRCSVSVLEY*RAFSFFSLNSL Trigger: GAGGCTGTTCAAACTGAAGAAGGAGAACGCTCTCAAGTACTCCAAGACGCTAACTGAGCACCTGAAGAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 72 bp | GGTGGATTTTCTGTGGAATGGTCACTGAAGAACCACTaGCTGAAGCACTACTTCCCCCAGAAGAGTAACTTC | + |
Preference number: 6 (lower is better) Translates to: GGFSVEWSLKNH*LKHYFPQKSNF Trigger: GAAGTTACTCTTCTGGGGGAAGTAGTGCTTCAGCAAGTGGTTCTTCAGTGACCATTCCACAGAAAATCCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 90 bp | CGTCTGTGGTCGTTGGTACTGCAGGCTTGGGAATTGCAACAAGCTTaGGTATCGATCTGTCTCCTATGTAATCCTTCATTTCATCGTAGT | + |
Preference number: 6 (lower is better) Translates to: RLWSLVLQAWELQQA*VSICLLCNPSFHRS Trigger: ACTACGATGAAATGAAGGATTACATAGGAGACAGATCGATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCAACGACCACAGACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060945.12 ENSMUST00000153821.2 |
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CDS CAA 90 bp | TCAGTTAGCGTCTTGGAGTACTTGAGAGCGTTCTCCTTCTTCAGTTaGAACAGCCTCAGGTACAATAATGACTGGCATCTCAGGCAAAGT | + |
Preference number: 6 (lower is better) Translates to: SVSVLEYLRAFSFFS*NSLRYNNDWHLRQS Trigger: ACTTTGCCTGAGATGCCAGTCATTATTGTACCTGAGGCTGTTCAAACTGAAGAAGGAGAACGCTCTCAAGTACTCCAAGACGCTAACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS TCA 72 bp | CCTGAGCGTTCTTCTCTAATGCATTCCCACACTCAATaGAAGACACTACAGCATCAAGGTAGTACACGGCTT | + |
Preference number: 6 (lower is better) Translates to: PERSSLMHSHTQ*KTLQHQGSTRL Trigger: AAGCCGTGTACTACCTTGATGCTGTAGTGTCTTTCATTGAGTGTGGGAATGCATTAGAGAAGAACGCTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS GCA 72 bp | TTGCCTTTGTTGGAAGCCTTTTCTGAGGCTTGCTTCTaGACCTCTCTCGAGTGTTTCTCTGGAACATTTTTC | + |
Preference number: 6 (lower is better) Translates to: LPLLEAFSEACF*TSLECFSGTFF Trigger: GAAAAATGTTCCAGAGAAACACTCGAGAGAGGTGCAGAAGCAAGCCTCAGAAAAGGCTTCCAACAAAGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CCA 72 bp | TCCAGGGCCAAAGTTAGACTGTTGCGACTCCTTAGTTaGAAAAGGGAATTTGGAAGGTTCTGTTTTGCATGG | + |
Preference number: 6 (lower is better) Translates to: SRAKVRLLRLLS*KREFGRFCFAW Trigger: CCATGCAAAACAGAACCTTCCAAATTCCCTTTTCCAACTAAGGAGTCGCAACAGTCTAACTTTGGCCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |
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CDS CAA 72 bp | GTATCATCATCATTCTTGTGTTTCCTCTTGCCTTTGTaGGAAGCCTTTTCTGAGGCTTGCTTCTGCACCTCT | + |
Preference number: 6 (lower is better) Translates to: VSSSFLCFLLPL*EAFSEACFCTS Trigger: AGAGGTGCAGAAGCAAGCCTCAGAAAAGGCTTCCAACAAAGGCAAGAGGAAACACAAGAATGATGATGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060945.12 |