RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AFF2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031189

Ensembl transcript IDs: ENSMUST00000033532.7

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGGCACTGGTAAAGGATaGGTGCTGATGCGAGAGATG +
Preference number: 2 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHGTGKG*VLMREM
Trigger: CATCTCTCGCATCAGCACTCATCCTTTACCAGTGCC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
3UTR-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACACTTTCCCAAATGAGTaGAGTTCCACCAGTGACCAT +
Preference number: 2 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHTFPNE*SSTSDH
Trigger: ATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGT...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGTGCTGGGAGGCTTGTaGGGCGGGGCTGGTGAGATG +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKVLGGL*GGAGEM
Trigger: CATCTCACCAGCCCCGCCCCACAAGCCTCCCAGCAC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCTGGGAATGTTGGAACTaGAAGGCCACTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTWECWN*KATAGS
Trigger: GCTCCCAGCAGTGGCCTTTCAGTTCCAACATTCCCA...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGCGGGGCTGGTGAGATaGAAGGGGGAAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHAGLVR*KGEAGR
Trigger: TCTGCCTGCTTCCCCCTTGCATCTCACCAGCCCCGC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGAGATGTCAGTTGCCTaGTCCTGCCCATCCATGGGC +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIEMSVA*SCPSMG
Trigger: GCCCATGGATGGGCAGGACCAGGCAACTGACATCTC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGGAGAGGCCTTTCTTTaGGTACAGCCACAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIGEAFL*VQPQPG
Trigger: GCCAGGCTGTGGCTGTACCCAAAGAAAGGCCTCTCC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGTCATGCTGCTGTGCTaGGTCAGAGGCCCCATCAGT +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIVMLLC*VRGPIS
Trigger: ACTGATGGGGCCTCTGACCCAGCACAGCAGCATGAC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGGTTTGGTTTCACTTTaGCCTGGACCTCCACCGGTT +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKGLVSL*PGPPPV
Trigger: AACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCACTGCTGGTCTGGCTTaGTTGTGCAGGGCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTTAGLA*LCRASV
Trigger: AACACTAGCCCTGCACAAGCAAGCCAGACCAGCAGT...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTGCCAGTGGGGAAAGTaGAGGAGGGAACAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKCQWGK*RREQLF
Trigger: GAAAAGCTGTTCCCTCCTGCACTTTCCCCACTGGCA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCCTTCCAAGAGTGTTCTaGACTCGGTTGGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTLPRVF*TRLARA
Trigger: TGCCCTTGCCAACCGAGTCCAGAACACTCTTGGAAG...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGGTACAGCCACAGCCTaGCTAGGGTTTGGTTTCACT +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKGTATA*LGFGFT
Trigger: AGTGAAACCAAACCCTAGCCAGGCTGTGGCTGTACC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCACTTCTTCTTCTCAGTaGCCAGAGGGACATGAGGCC +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTTSSSQ*PEGHEA
Trigger: GGCCTCATGTCCCTCTGGCCACTGAGAAGAAGAAGT...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCTTTGCCCTTAGGGGCTaGTTTTTCCACAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTFALRG*FFHSCG
Trigger: GCCACAGCTGTGGAAAAACCAGCCCCTAAGGGCAAA...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTGGCTAGCAGCCATATaGTGGATGCGCTGGGGAATT +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKWLAAI*WMRWGI
Trigger: AATTCCCCAGCGCATCCACCATATGGCTGCTAGCCA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTCAGTATCACGACTaGAGGTGGAGGCATCGGTGT +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTIQYHD*RWRHRC
Trigger: ACACCGATGCCTCCACCTTCAGTCGTGATACTGAAT...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTGCATCTTGTTTGGTTaGCTGCTGGTCTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKCILFG*LLVWLA
Trigger: AGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGATGTCATCTCCAGGTaGCTGCTATCCATAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKDVISR*LLSIRP
Trigger: TGGCCTTATGGATAGCAGTCACCTGGAGATGACATC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGTCTCATTGCATACCTaGGGAGCTCCACAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIVSLHT*GAPQSQ
Trigger: CTGAGACTGTGGAGCTCCTCAGGTATGCAATGAGAC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTGCGCTGGGGAATTGTaGCAGGGCCATTGTTACAAT +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKCAGEL*QGHCYN
Trigger: ATTGTAACAATGGCCCTGTCACAATTCCCCAGCGCA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCAAAGCTCGTTGGCTGTaGACTGTGTGGTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTKARWL*TVWSRS
Trigger: AGACCTTGACCACACAGTGCACAGCCAACGAGCTTT...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGTTTCTGCTGGCTTGTaGTTACGTTTGCCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKVSAGL*LRLPLG
Trigger: CCCTAAGGGCAAACGTAAGCACAAGCCAGCAGAAAC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTTGTCCTCCAGGCGCTaGTTCTTCTCAGGGATTTTC +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKLSSRR*FFSGIF
Trigger: GAAAATCCCTGAGAAGAAGCAGCGCCTGGAGGACAA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTTGGTCATGCTGCTGTaGTGGGTCAGAGGCCCCATC +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHLVMLL*WVRGPI
Trigger: GATGGGGCCTCTGACCCAGCACAGCAGCATGACCAA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCGGAAGGCTTCAGTGTTaGAGAGATGTCAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTGRLQC*RDVSCL
Trigger: CAGGCAACTGACATCTCTCCAACACTGAAGCCTTCC...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTCCTGGTAAAGCTCGTTaGCTGTGCACTGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIPGKAR*LCTVWS
Trigger: TGACCACACAGTGCACAGCCAACGAGCTTTACCAGG...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGCTAGGCACTGGTTTGTaGGCAGTAGCTTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKLGTGL*AVALFR
Trigger: CCGAAACAAAGCTACTGCCCACAAACCAGTGCCTAG...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACCATTGGCACTACTGCTaGACAGAAGGGGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHHWHYC*TEGAGL
Trigger: CAGCCCTGCCCCTTCTGTCCAGCAGTAGTGCCAATG...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTTGGGTCTCCGGACATTaGCACTACTGCTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIWVSGH*HYCWTE
Trigger: TTCTGTCCAGCAGTAGTGCCAATGTCCGGAGACCCA...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTCCTGGAGTCAGATGCTaGGATTCCCGCAAGATTTCT +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIPGVRC*DSRKIS
Trigger: AGAAATCTTGCGGGAATCTCAGCATCTGACTCCAGG...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCAAGGTGGCAGTACTTTaGTCTGTAGGGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTKVAVL*SVGSLP
Trigger: AGGAAGAGACCCTACAGATCAAAGTACTGCCACCTT...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGTTTGCTCTCCTGGATaGATTTTCTCTAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKVCSPG*IFSSAG
Trigger: CCCAGCACTAGAGAAAATTCATCCAGGAGAGCAAAC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACCGCTGTCAGTGGTGCTaGTTTCAGTGTCTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHRCQWC*FQCLSP
Trigger: CGGACTCAGACACTGAAAGCAGCACCACTGACAGCG...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCCTCAGGGATTTTCTCTaGAGTTTCTGCTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTLRDFL*SFCWLV
Trigger: CACAAGCCAGCAGAAACTGCAGAGAAAATCCCTGAG...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACCAAGATTGGTCATGCTaGTGTGCTGGGTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHQDWSC*CAGSEA
Trigger: GGCCTCTGACCCAGCACAGCAGCATGACCAATCTTG...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCACAAATGAGCATCGATaGGTAGCCAACACAGTCCCT +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTTNEHR*VANTVP
Trigger: AGGGACTGTGTTGGCTACGCATCGATGCTCATTTGT...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCTGTCTGCATCTTGTTTaGTTGACTGCTGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTCLHLV*LTAGLA
Trigger: AGCCAGACCAGCAGTCAACCAAACAAGATGCAGACA...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGCTGAAAGGCCACTGCTaGGAGCTAATAAAGATGAGG +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKLKGHC*ELIKMR
Trigger: CCTCATCTTTATTAGCTCCCAGCAGTGGCCTTTCAG...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCCTGGAGTTTTCTGTGTaGGCCTTGGTCGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTLEFSV*ALVELF
Trigger: AAAAAGCTCGACCAAGGCCCACACAGAAAACTCCAG...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCCTCTTTCCTAGGCACTaGTTTGTGGGCAGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTLFPRH*FVGSSF
Trigger: AAAGCTACTGCCCACAAACCAGTGCCTAGGAAAGAG...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAAGCTCAGTTTGCATaGCAGGAGGCGGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIKAQFA*QEAGKK
Trigger: CTTTTTCCCCGCCTCCTGCCATGCAAACTGAGCTTT...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGTTTTTCCACAGCTGTaGCAGCAGTTTGACGCTTGG +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIVFPQL*QQFDAW
Trigger: CCAAGCGTCAAACTGCTGCCACAGCTGTGGAAAAAC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGACATTTCTGCGACGTaGAGGATCCTCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHDISAT*RILCQW
Trigger: CCACTGGCAGAGGATCCTCCACGTCGCAGAAATGTC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGAGAGACACTGGGGATaGAGTATTCTTTCCATTGCC +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKERHWG*SILSIA
Trigger: GGCAATGGAAAGAATACTCCATCCCCAGTGTCTCTC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGCCAAGTCCCAATCCCTaGAAAAGTCGAATAGATCCA +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKPSPNP*KSRIDP
Trigger: TGGATCTATTCGACTTTTTCAGGGATTGGGACTTGG...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGACTTGTTCTGGGACGTaGCTTTGTTCAGCCATTTGT +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKTCSGT*LCSAIC
Trigger: ACAAATGGCTGAACAAAGTCACGTCCCAGAACAAGT...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTTGGCCACAAATAAATaGCTTGTTCTGGGACGTGAC +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKLATNK*LVLGRD
Trigger: GTCACGTCCCAGAACAAGTCATTTATTTGTGGCCAA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTGGGAGAGACATTGTTaGGAGACACTGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHWERHC*ETLGME
Trigger: CTCCATCCCCAGTGTCTCTCAACAATGTCTCTCCCA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCGTTACAATTCCCCACTaGGTTGATGGGAGAGACATT +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTVTIPH*VDGRDI
Trigger: AATGTCTCTCCCATCAACTCAGTGGGGAATTGTAAC...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGATGGGAGTTTGGGGTaGAGAATTCTTTGGAATGCC +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIDGSLG*RILWNA
Trigger: GGCATTCCAAAGAATTCTGCACCCCAAACTCCCATC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCGGAGACCCAGGTGCTTaGACTGTAAATTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTGDPGA*TVNSDS
Trigger: AGAATCTGAATTTACAGTGCAAGCACCTGGGTCTCC...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTGGAGAGATGTCAGTTaGCTGGTCCTGCCCATCCAT +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHWRDVS*LVLPIH
Trigger: ATGGATGGGCAGGACCAGGCAACTGACATCTCTCCA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGGTCATCTTCATCACTaGTCAGCTTCAAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKGHLHH*SASSHP
Trigger: AGGATGACTTGAAGCTGAGCAGTGATGAAGATGACC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTATTCGCTGTCAGTGGTaGTGCTTTCAGTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIIRCQW*CFQCLS
Trigger: ACTCAGACACTGAAAGCAGCACCACTGACAGCGAAT...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCAGTGAAGGACAAGGCTaGATCTGCATAATTCACAGC +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTSEGQG*ICIIHS
Trigger: GCTGTGAATTATGCAGATGCAGCCTTGTCCTTCACT...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTTGCTGATGGGAGTTTaGGGTGCAGAATTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKLLMGV*GAEFFG
Trigger: TCCAAAGAATTCTGCACCCCAAACTCCCATCAGCAA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTACTCTCTGACTCACTaGAGCTGCCAGACCCCACAT +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHYSLTH*SCQTPH
Trigger: ATGTGGGGTCTGGCAGCTCCAGTGAGTCAGAGAGTA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGAGAAATGGTCTCTGTaGGTGTCTCATTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIEKWSL*VSHFGH
Trigger: GTGGCCAAAATGAGACACCCACAGAGACCATTTCTC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCTCTCCTCATTGCTGGTaGATAAGTTGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTSPHCW*ISCCCC
Trigger: GCAACAGCAACAACTTATCCACCAGCAATGAGGAGA...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACCTAGCAGCCATATGGTaGATGCGCTGGGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHLAAIW*MRWGIV
Trigger: CACAATTCCCCAGCGCATCCACCATATGGCTGCTAG...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTTGGCAGTTTAGTCTTTaGACTGACTGCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIWQFSL*TDCTGF
Trigger: AAACCCAGTGCAGTCAGTTCAAAGACTAAACTGCCA...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACCAGAGTCATCAAATGTaGGCTTGGGTCTCCGGACAT +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHQSHQM*AWVSGH
Trigger: ATGTCCGGAGACCCAAGCTCACATTTGATGACTCTG...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGCAGAATTCTTTGGAATaGCCACCAGATGATTCTGAC +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKQNSLE*PPDDSD
Trigger: GTCAGAATCATCTGGTGGGCATTCCAAAGAATTCTG...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGGTCTGGCTTGCTTGTaGAGGGCTAGTGTTATGACT +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHGLACL*RASVMT
Trigger: AGTCATAACACTAGCCCTGCACAAGCAAGCCAGACC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGTCCCATGCTTGTTTTaGAGTAAAGCCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHVPCLF*SKALVG
Trigger: TCCCACCAGGGCTTTACTGCAAAACAAGCATGGGAC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAGCCATTTGTCTAGCTaGCATTTGTTGGTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTISHLSS*HLLVEG
Trigger: ACCCTCAACCAACAAATGGCAGCTAGACAAATGGCT...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTTGGTGGATAAGTTGTTaGTGTTGCCATTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIWWISC*CCHWSR
Trigger: CCTTGACCAATGGCAACAGCAACAACTTATCCACCA...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTTTCTCTGCAGTTTCTaGTGGCTTGTGCTTACGTTT +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKFLCSF*WLVLTF
Trigger: AAACGTAAGCACAAGCCAGCAGAAACTGCAGAGAAA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACCCTCAAGCATCTTTGTaGAAGCTCTGCTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHPQASL*KLCCLG
Trigger: ACCCAAGCAGCAGAGCTTCCACAAAGATGCTTGAGG...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGAGGAGGCAGAGAAATaGTCTCTGTGGGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHEEAEK*SLWVSH
Trigger: ATGAGACACCCACAGAGACCATTTCTCTGCCTCCTC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAGAATACATGGTATATaGGGACTTCGCTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIRIHGI*GLRFQR
Trigger: CCTCTGGAAGCGAAGTCCCCATATACCATGTATTCT...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGAAATGTTTTTGTCCTaGCCGAAATGCCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIEMFLS*PKCPLL
Trigger: CAACAATGGGCATTTCGGTCAGGACAAAAACATTTC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCGTTTTTGTTGTCCCATaGTTGTTTTGCAGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: NKHNERELSQMSGVPPVTVFVVP*LFCSKA
Trigger: GGCTTTACTGCAAAACAAGCATGGGACAACAAAAAC...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTCATGGGCCTTACATATaGAGTTGGTTTTTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIHGPYI*SWFLLS
Trigger: GGACAACAAAAACCAACTGCATATGTAAGGCCCATG...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGATGTTGACAGCTTATaGTTCAAGGCCTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKDVDSL*FKAFVS
Trigger: AGAAACAAAGGCCTTGAAGCATAAGCTGTCAACATC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGAGGTGGGTCTTGTGTaGATGTCTGCATCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHEVGLV*MSASCL
Trigger: CAAACAAGATGCAGACATCCACACAAGACCCACCTC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGCCTTACATATGCAGTTaGTTTTTGTTGTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKPYICS*FLLSHA
Trigger: AGCATGGGACAACAAAAACCAACTGCATATGTAAGG...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTGTAGGGTCTCTTCCTaGTCTGTGTTGGAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHCRVSS*SVLESD
Trigger: ATCTGACTCCAACACAGACCAGGAAGAGACCCTACA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTCAGTCTCAGAATACATaGTATATGGGGACTTCGCTT +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIQSQNT*YMGTSL
Trigger: AAGCGAAGTCCCCATATACCATGTATTCTGAGACTG...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTTTCTGGATAAAAGCTTaGTTCACTTTTGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIFWIKA*FTFADG
Trigger: CCCATCAGCAAAAGTGAAGCAAGCTTTTATCCAGAA...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGAACTGAAAGGCCACTaGTGGGAGCTAATAAAGATG +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHELKGH*WELIKM
Trigger: CATCTTTATTAGCTCCCAGCAGTGGCCTTTCAGTTC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTTGCTGTGTATTAGAGTaGAATTCAGTATCACGACTG +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTICCVLE*NSVSRL
Trigger: CAGTCGTGATACTGAATTCCACTCTAATACACAGCA...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGTGGGTGTCTCATTTTaGCCACAAATAAATGACTTG +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIVGVSF*PQINDL
Trigger: CAAGTCATTTATTTGTGGCCAAAATGAGACACCCAC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACCTGTCTCCTCATTGCTaGTGGATAAGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHLSPHC*WISCCC
Trigger: ACAGCAACAACTTATCCACCAGCAATGAGGAGACAG...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTTTTCCAATTGTCCTTTaGGAAACTGTGTCAACTGAT +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIFPIVL*ETVSTD
Trigger: ATCAGTTGACACAGTTTCTCAAAGGACAATTGGAAA...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGATTATTCTTAGGTTTTaGCTTTTCAACAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: HNERELSQMSGVPPVTIKIILRF*LFNSLV
Trigger: TACCAGGCTGTTGAAAAGGCAAAACCTAAGAATAAT...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTTCTTCAACACAGCTTaGATCACTGGTAAGGCTTAC +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHFFNTA*ITGKAY
Trigger: GTAAGCCTTACCAGTGATCCAAGCTGTGTTGAAGAA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACATTGTTGAGAGACACTaGGGATGGAGTATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHIVERH*GWSILS
Trigger: GGAAAGAATACTCCATCCCCAGTGTCTCTCAACAAT...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACCTTACTTCACTTGTTTaGAGGATTGTGAACTTTGGC +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHLTSLV*RIVNFG
Trigger: GCCAAAGTTCACAATCCTGCAAACAAGTGAAGTAAG...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR GCA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAATTTCTCAAACAGTaGATCAGCTTTGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: KHNERELSQMSGVPPVTIKFLKQ*ISFVFQ
Trigger: CTGAAACACAAAGCTGATGCACTGTTTGAGAAATTT...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTGTTCTCAAATTCAATaGAAGGCTTCAGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHCSQIQ*KASVLE
Trigger: CTCCAACACTGAAGCCTTCCATTGAATTTGAGAACA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACATAAATGACTTGTTCTaGGACGTGACTTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHINDLF*DVTLFS
Trigger: GCTGAACAAAGTCACGTCCCAGAACAAGTCATTTAT...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR TCA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACAAAATATTCCATCAGTaGTCTGGAGTACTTCATAGC +
Preference number: 4 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHKIFHQ*SGVLHS
Trigger: GCTATGAAGTACTCCAGATCACTGATGGAATATTTT...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp GGGTCTCCGGACATTGGCACTACTGCTGGACAGAAGGGGCAGGGCTaGCCAGGATGTCATCTCCAGGTGACTGCTATCCATAAGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GSPDIGTTAGQKGQG*PGCHLQVTAIHKAR
Trigger: TCTGGCCTTATGGATAGCAGTCACCTGGAGATGACATCCTGGGCAGCCCTGCCCCTTCTGTCCAGCAGTAGTGCCAATGTCCGGAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp CTCAGTGGCCAGAGGGACATGAGGCCTTGGCTCTTTCCTAGGCACTaGTTTGTGGGCAGTAGCTTTGTTTCGGCTTCGTGGTGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LSGQRDMRPWLFPRH*FVGSSFVSASWWVR
Trigger: CCTGACCCACCACGAAGCCGAAACAAAGCTACTGCCCACAAACCAGTGCCTAGGAAAGAGCCAAGGCCTCATGTCCCTCTGGCCACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp GCCAACACAGTCCCTGGCGAACATAGCGGACAAGATTGGTCATGCTaGTGTGCTGGGTCAGAGGCCCCATCAGTGTATCCAGATCACCAA +
Preference number: 5 (lower is better)
Translates to: ANTVPGEHSGQDWSC*CAGSEAPSVYPDHQ
Trigger: TTGGTGATCTGGATACACTGATGGGGCCTCTGACCCAGCACAGCAGCATGACCAATCTTGTCCGCTATGTTCGCCAGGGACTGTGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp GTAGCCAACACAGTCCCTGGCGAACATAGCGGACAAGATTGGTCATaGTGCTGTGCTGGGTCAGAGGCCCCATCAGTGTATCCAGATCAC +
Preference number: 5 (lower is better)
Translates to: VANTVPGEHSGQDWS*CCAGSEAPSVYPDH
Trigger: GTGATCTGGATACACTGATGGGGCCTCTGACCCAGCACAGCAGCATGACCAATCTTGTCCGCTATGTTCGCCAGGGACTGTGTTGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp GTCCTGACCGAAATGCCCATTGTTGCCACTGACATTTCTGCGACGTaGAGGATCCTCTGCCAGTGGGGAAAGTGCAGGAGGGAACAGCTT +
Preference number: 5 (lower is better)
Translates to: VLTEMPIVATDISAT*RILCQWGKCRREQL
Trigger: AAGCTGTTCCCTCCTGCACTTTCCCCACTGGCAGAGGATCCTCCACGTCGCAGAAATGTCAGTGGCAACAATGGGCATTTCGGTCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp ATGCAAGGGGGAAGCAGGCAGATAGTAGTGTTGTCCTCCAGGCGCTaGTTCTTCTCAGGGATTTTCTCTGCAGTTTCTGCTGGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: MQGGSRQIVVLSSRR*FFSGIFSAVSAGLC
Trigger: GCACAAGCCAGCAGAAACTGCAGAGAAAATCCCTGAGAAGAAGCAGCGCCTGGAGGACAACACTACTATCTGCCTGCTTCCCCCTTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp TGCAGTAAAGCCCTGGTGGGAATGTTGGAACTGAAAGGCCACTGCTaGGAGCTAATAAAGATGAGGCAACTAGGGGAGACCCAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: CSKALVGMLELKGHC*ELIKMRQLGETQVL
Trigger: AAGCACCTGGGTCTCCCCTAGTTGCCTCATCTTTATTAGCTCCCAGCAGTGGCCTTTCAGTTCCAACATTCCCACCAGGGCTTTACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp TTGGGTACAGCCACAGCCTGGCTAGGGTTTGGTTTCACTTTGACCTaGACCTCCACCGGTTGTATTATTGGAGGAGGCAGAGAAATGGTC +
Preference number: 5 (lower is better)
Translates to: LGTATAWLGFGFTLT*TSTGCIIGGGREMV
Trigger: GACCATTTCTCTGCCTCCTCCAATAATACAACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCCTAGCCAGGCTGTGGCTGTACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp AAGGAGAGGCCTTTCTTTGGGTACAGCCACAGCCTGGCTAGGGTTTaGTTTCACTTTGACCTGGACCTCCACCGGTTGTATTATTGGAGG +
Preference number: 5 (lower is better)
Translates to: KERPFFGYSHSLARV*FHFDLDLHRLYYWR
Trigger: CCTCCAATAATACAACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCCTAGCCAGGCTGTGGCTGTACCCAAAGAAAGGCCTCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp CTCTGCAGTTTCTGCTGGCTTGTGCTTACGTTTGCCCTTAGGGGCTaGTTTTTCCACAGCTGTGGCAGCAGTTTGACGCTTGGGTTTAGA +
Preference number: 5 (lower is better)
Translates to: LCSFCWLVLTFALRG*FFHSCGSSLTLGFR
Trigger: TCTAAACCCAAGCGTCAAACTGCTGCCACAGCTGTGGAAAAACCAGCCCCTAAGGGCAAACGTAAGCACAAGCCAGCAGAAACTGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS TCA 90 bp CCATGGAAATGTTTTTGTCCTGACCGAAATGCCCATTGTTGCCACTaGCATTTCTGCGACGTGGAGGATCCTCTGCCAGTGGGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: PWKCFCPDRNAHCCH*HFCDVEDPLPVGKV
Trigger: CACTTTCCCCACTGGCAGAGGATCCTCCACGTCGCAGAAATGTCAGTGGCAACAATGGGCATTTCGGTCAGGACAAAAACATTTCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp TTTTGCAGTAAAGCCCTGGTGGGAATGTTGGAACTGAAAGGCCACTaGTGGGAGCTAATAAAGATGAGGCAACTAGGGGAGACCCAGGTG +
Preference number: 5 (lower is better)
Translates to: FCSKALVGMLELKGH*WELIKMRQLGETQV
Trigger: CACCTGGGTCTCCCCTAGTTGCCTCATCTTTATTAGCTCCCAGCAGTGGCCTTTCAGTTCCAACATTCCCACCAGGGCTTTACTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp CAGTCTGGTTTGAGGTGGGTCTTGTGTGGATGTCTGCATCTTGTTTaGTTGACTGCTGGTCTGGCTTGCTTGTGCAGGGCTAGTGTTATG +
Preference number: 5 (lower is better)
Translates to: QSGLRWVLCGCLHLV*LTAGLACLCRASVM
Trigger: CATAACACTAGCCCTGCACAAGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAGACATCCACACAAGACCCACCTCAAACCAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp GTCAGTTGCCTGGTCCTGCCCATCCATGGGCCTTACATATGCAGTTaGTTTTTGTTGTCCCATGCTTGTTTTGCAGTAAAGCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: VSCLVLPIHGPYICS*FLLSHACFAVKPWW
Trigger: CCACCAGGGCTTTACTGCAAAACAAGCATGGGACAACAAAAACCAACTGCATATGTAAGGCCCATGGATGGGCAGGACCAGGCAACTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp CTAATAAGACTAAGGAGAGGCCTTTCTTTGGGTACAGCCACAGCCTaGCTAGGGTTTGGTTTCACTTTGACCTGGACCTCCACCGGTTGT +
Preference number: 5 (lower is better)
Translates to: LIRLRRGLSLGTATA*LGFGFTLTWTSTGC
Trigger: ACAACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCCTAGCCAGGCTGTGGCTGTACCCAAAGAAAGGCCTCTCCTTAGTCTTATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp CCTAGGCACTGGTTTGTGGGCAGTAGCTTTGTTTCGGCTTCGTGGTaGGTCAGGAAGCTCTACACTTCCTTTTTCTTTGGGAGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: PRHWFVGSSFVSASW*VRKLYTSFFFGSAV
Trigger: AACAGCACTCCCAAAGAAAAAGGAAGTGTAGAGCTTCCTGACCCACCACGAAGCCGAAACAAAGCTACTGCCCACAAACCAGTGCCTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp TTGTGTGGATGTCTGCATCTTGTTTGGTTGACTGCTGGTCTGGCTTaGTTGTGCAGGGCTAGTGTTATGACTATCTCGTGGCCACTCAGA +
Preference number: 5 (lower is better)
Translates to: LCGCLHLVWLTAGLA*LCRASVMTISWPLR
Trigger: TCTGAGTGGCCACGAGATAGTCATAACACTAGCCCTGCACAAGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAGACATCCACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp TCAATGGAAGGCTTCAGTGTTGGAGAGATGTCAGTTGCCTGGTCCTaGCCATCCATGGGCCTTACATATGCAGTTGGTTTTTGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: SMEGFSVGEMSVAWS*PSMGLTYAVGFCCP
Trigger: GGGACAACAAAAACCAACTGCATATGTAAGGCCCATGGATGGGCAGGACCAGGCAACTGACATCTCTCCAACACTGAAGCCTTCCATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp AATGACTTGTTCTGGGACGTGACTTTGTTCAGCCATTTGTCTAGCTaGCATTTGTTGGTTGAGGGTGGCTCAGGCTCTGGAGTAGCCACT +
Preference number: 5 (lower is better)
Translates to: NDLFWDVTLFSHLSS*HLLVEGGSGSGVAT
Trigger: AGTGGCTACTCCAGAGCCTGAGCCACCCTCAACCAACAAATGGCAGCTAGACAAATGGCTGAACAAAGTCACGTCCCAGAACAAGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp AGGGTTTGGTTTCACTTTGACCTGGACCTCCACCGGTTGTATTATTaGAGGAGGCAGAGAAATGGTCTCTGTGGGTGTCTCATTTTGGCC +
Preference number: 5 (lower is better)
Translates to: RVWFHFDLDLHRLYY*RRQRNGLCGCLILA
Trigger: GGCCAAAATGAGACACCCACAGAGACCATTTCTCTGCCTCCTCCAATAATACAACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp TTTCCTAGGCACTGGTTTGTGGGCAGTAGCTTTGTTTCGGCTTCGTaGTGGGTCAGGAAGCTCTACACTTCCTTTTTCTTTGGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: FPRHWFVGSSFVSAS*WVRKLYTSFFFGSA
Trigger: AGCACTCCCAAAGAAAAAGGAAGTGTAGAGCTTCCTGACCCACCACGAAGCCGAAACAAAGCTACTGCCCACAAACCAGTGCCTAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp CATTGCATACCTGAGGAGCTCCACAGTCTCAGAATACATGGTATATaGGGACTTCGCTTCCAGAGGATCACGTTCCATGGCATTGCCACA +
Preference number: 5 (lower is better)
Translates to: HCIPEELHSLRIHGI*GLRFQRITFHGIAT
Trigger: TGTGGCAATGCCATGGAACGTGATCCTCTGGAAGCGAAGTCCCCATATACCATGTATTCTGAGACTGTGGAGCTCCTCAGGTATGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp AGAGATGTCAGTTGCCTGGTCCTGCCCATCCATGGGCCTTACATATaGAGTTGGTTTTTGTTGTCCCATGCTTGTTTTGCAGTAAAGCCC +
Preference number: 5 (lower is better)
Translates to: RDVSCLVLPIHGPYI*SWFLLSHACFAVKP
Trigger: GGGCTTTACTGCAAAACAAGCATGGGACAACAAAAACCAACTGCATATGTAAGGCCCATGGATGGGCAGGACCAGGCAACTGACATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp CTGTGGTGTGGCCAAGAGTGGGTTCACAGGATTATTCTTAGGTTTTaGCTTTTCAACAGCCTGGTAAAGCTCGTTGGCTGTGCACTGTGT +
Preference number: 5 (lower is better)
Translates to: LWCGQEWVHRIILRF*LFNSLVKLVGCALC
Trigger: ACACAGTGCACAGCCAACGAGCTTTACCAGGCTGTTGAAAAGGCAAAACCTAAGAATAATCCTGTGAACCCACTCTTGGCCACACCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp GGTAGACAAAGAAGTCTTCCAGTCTGGTTTGAGGTGGGTCTTGTGTaGATGTCTGCATCTTGTTTGGTTGACTGCTGGTCTGGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: GRQRSLPVWFEVGLV*MSASCLVDCWSGLL
Trigger: AAGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAGACATCCACACAAGACCCACCTCAAACCAGACTGGAAGACTTCTTTGTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp GAGGTTTCCAAAACTGTTCTCAAATTCAATGGAAGGCTTCAGTGTTaGAGAGATGTCAGTTGCCTGGTCCTGCCCATCCATGGGCCTTAC +
Preference number: 5 (lower is better)
Translates to: EVSKTVLKFNGRLQC*RDVSCLVLPIHGPY
Trigger: GTAAGGCCCATGGATGGGCAGGACCAGGCAACTGACATCTCTCCAACACTGAAGCCTTCCATTGAATTTGAGAACAGTTTTGGAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp CGAAGCACATTACTGGTAATATTCACATGGCTAGCAGCCATATGGTaGATGCGCTGGGGAATTGTGACAGGGCCATTGTTACAATTCCCC +
Preference number: 5 (lower is better)
Translates to: RSTLLVIFTWLAAIW*MRWGIVTGPLLQFP
Trigger: GGGGAATTGTAACAATGGCCCTGTCACAATTCCCCAGCGCATCCACCATATGGCTGCTAGCCATGTGAATATTACCAGTAATGTGCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp CCCCGAAGCACATTACTGGTAATATTCACATGGCTAGCAGCCATATaGTGGATGCGCTGGGGAATTGTGACAGGGCCATTGTTACAATTC +
Preference number: 5 (lower is better)
Translates to: PRSTLLVIFTWLAAI*WMRWGIVTGPLLQF
Trigger: GAATTGTAACAATGGCCCTGTCACAATTCCCCAGCGCATCCACCATATGGCTGCTAGCCATGTGAATATTACCAGTAATGTGCTTCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS TCA 90 bp GGTTTGCTAGAGGTGATTTGTCCAGCCATGGAAATGTTTTTGTCCTaGCCGAAATGCCCATTGTTGCCACTGACATTTCTGCGACGTGGA +
Preference number: 5 (lower is better)
Translates to: GLLEVICPAMEMFLS*PKCPLLPLTFLRRG
Trigger: TCCACGTCGCAGAAATGTCAGTGGCAACAATGGGCATTTCGGTCAGGACAAAAACATTTCCATGGCTGGACAAATCACCTCTAGCAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp CACATTGGTTTGTGTTGCAGGCGTAGACTGTGGTGTGGCCAAGAGTaGGTTCACAGGATTATTCTTAGGTTTTGCCTTTTCAACAGCCTG +
Preference number: 5 (lower is better)
Translates to: HIGLCCRRRLWCGQE*VHRIILRFCLFNSL
Trigger: CAGGCTGTTGAAAAGGCAAAACCTAAGAATAATCCTGTGAACCCACTCTTGGCCACACCACAGTCTACGCCTGCAACACAAACCAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp TTACTGGTAATATTCACATGGCTAGCAGCCATATGGTGGATGCGCTaGGGAATTGTGACAGGGCCATTGTTACAATTCCCCACTGAGTTG +
Preference number: 5 (lower is better)
Translates to: LLVIFTWLAAIWWMR*GIVTGPLLQFPTEL
Trigger: CAACTCAGTGGGGAATTGTAACAATGGCCCTGTCACAATTCCCCAGCGCATCCACCATATGGCTGCTAGCCATGTGAATATTACCAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGAGGAGAGGCCTTTCTTaGGGTACAGCCACAGCCTGG +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKRRGLS*GTATAW
Trigger: CCAGGCTGTGGCTGTACCCAAAGAAAGGCCTCTCCT...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS TCA 90 bp CTTGGGTCGCTCCACTTTTGTAAGGTAAATCCTGGAGTCAGATGCTaGGATTCCCGCAAGATTTCTTCAACACAGCTTGGATCACTGGTA +
Preference number: 5 (lower is better)
Translates to: LGSLHFCKVNPGVRC*DSRKISSTQLGSLV
Trigger: TACCAGTGATCCAAGCTGTGTTGAAGAAATCTTGCGGGAATCTCAGCATCTGACTCCAGGATTTACCTTACAAAAGTGGAGCGACCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp TCAAATTCAATGGAAGGCTTCAGTGTTGGAGAGATGTCAGTTGCCTaGTCCTGCCCATCCATGGGCCTTACATATGCAGTTGGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: SNSMEGFSVGEMSVA*SCPSMGLTYAVGFC
Trigger: ACAAAAACCAACTGCATATGTAAGGCCCATGGATGGGCAGGACCAGGCAACTGACATCTCTCCAACACTGAAGCCTTCCATTGAATTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCTTGTGGGCAGTAGCTTaGTTTCGGCTTCGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTLWAVA*FRLRGG
Trigger: CCCACCACGAAGCCGAAACAAAGCTACTGCCCACAA...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCAGGCAGATAGTAGTGTaGTCCTCCAGGCGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTRQIVV*SSRRCF
Trigger: GAAGCAGCGCCTGGAGGACAACACTACTATCTGCCT...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTTGGGTCTCCGGACATaGGCACTACTGCTGGACAGA +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKLGLRT*ALLLDR
Trigger: TCTGTCCAGCAGTAGTGCCAATGTCCGGAGACCCAA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 90 bp AGGATCACGTTCCATGGCATTGCCACATTCAGTGAAGGACAAGGCTaGATCTGCATAATTCACAGCTTTGCCAAATTTCTCAAACAGTGC +
Preference number: 5 (lower is better)
Translates to: RITFHGIATFSEGQG*ICIIHSFAKFLKQC
Trigger: GCACTGTTTGAGAAATTTGGCAAAGCTGTGAATTATGCAGATGCAGCCTTGTCCTTCACTGAATGTGGCAATGCCATGGAACGTGATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp ATAGTGATCCAAAGGAGAGGTTTCCAAAACTGTTCTCAAATTCAATaGAAGGCTTCAGTGTTGGAGAGATGTCAGTTGCCTGGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: IVIQRRGFQNCSQIQ*KASVLERCQLPGPA
Trigger: GGCAGGACCAGGCAACTGACATCTCTCCAACACTGAAGCCTTCCATTGAATTTGAGAACAGTTTTGGAAACCTCTCCTTTGGATCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGCTGCATCTTGTTTGGTaGACTGCTGGTCTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKLHLVW*TAGLAC
Trigger: GCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAG...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTCTGGACCTCCACCGGTaGTATTATTGGAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTILDLHR*YYWRRQ
Trigger: CTGCCTCCTCCAATAATACAACCGGTGGAGGTCCAG...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGGGTTTGGTTTCACTTaGACCTGGACCTCCACCGGT +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTIGFGFT*TWTSTG
Trigger: ACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp ATTATTGGAGGAGGCAGAGAAATGGTCTCTGTGGGTGTCTCATTTTaGCCACAAATAAATGACTTGTTCTGGGACGTGACTTTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: IIGGGREMVSVGVSF*PQINDLFWDVTLFS
Trigger: GCTGAACAAAGTCACGTCCCAGAACAAGTCATTTATTTGTGGCCAAAATGAGACACCCACAGAGACCATTTCTCTGCCTCCTCCAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp CTTATGCTTCAAGGCCTTTGTTTCTGGAGTTTTCTGTGTGGGCCTTaGTCGAGCTTTTTCCCTAATAAGACTAAGGAGAGGCCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LMLQGLCFWSFLCGP*SSFFPNKTKERPFF
Trigger: AAAGAAAGGCCTCTCCTTAGTCTTATTAGGGAAAAAGCTCGACCAAGGCCCACACAGAAAACTCCAGAAACAAAGGCCTTGAAGCATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGATGTCTGCATCTTGTTaGGTTGACTGCTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKMSASC*VDCWSG
Trigger: GCCAGACCAGCAGTCAACCAAACAAGATGCAGACAT...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGTCTTCCAGTCTGGTTaGAGGTGGGTCTTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTIVFQSG*RWVLCG
Trigger: TCCACACAAGACCCACCTCAAACCAGACTGGAAGAC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGGGAGACCCAGGTGCTaGCACTGTAAATTCAGATTC +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKGRPRC*HCKFRF
Trigger: GAATCTGAATTTACAGTGCAAGCACCTGGGTCTCCC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTACTCTAGGAGCCTCATaGGATTCGCTGTCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTITLGAS*DSLSVV
Trigger: CACCACTGACAGCGAATCCAATGAGGCTCCTAGAGT...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCGCAGTTTCTGCTGGCTaGTGCTTACGTTTGCCCTTA +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTAVSAG*CLRLPL
Trigger: TAAGGGCAAACGTAAGCACAAGCCAGCAGAAACTGC...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGCCGAAATGCCCATTGTaGCCACTGACATTTCTGCGA +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKPKCPL*PLTFLR
Trigger: TCGCAGAAATGTCAGTGGCAACAATGGGCATTTCGG...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCTCATCAAATGTGAGCTaGGGTCTCCGGACATTGGCA +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTSSNVS*GLRTLA
Trigger: TGCCAATGTCCGGAGACCCAAGCTCACATTTGATGA...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCCAGAAGCCAAGGGGCTaGCAAAGTTCTTCAGTCTCA +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTQKPRG*QSSSVS
Trigger: TGAGACTGAAGAACTTTGCAAGCCCCTTGGCTTCTG...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGCAAGGGCATCCCCTTaGTTTGTATATTCAGCTACC +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKARASP*FVYSAT
Trigger: GGTAGCTGAATATACAAACAAAGGGGATGCCCTTGC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGAAGCTTGCTTCACTTTaGCTGATGGGAGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKKLASL*LMGVWG
Trigger: ACCCCAAACTCCCATCAGCAAAAGTGAAGCAAGCTT...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTGTACCAATTTGGGGTaGCTCAGCAGGGTAGACAAA +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKCTNLG*LSRVDK
Trigger: TTTGTCTACCCTGCTGAGCAACCCCAAATTGGTACA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTTTGTCTAGCTGCCATTaGTTGGTTGAGGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTILSSCH*LVEGGS
Trigger: TGAGCCACCCTCAACCAACAAATGGCAGCTAGACAA...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCTTCTGGGACGTGACTTaGTTCAGCCATTTGTCTAGC +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTFWDVT*FSHLSS
Trigger: GCTAGACAAATGGCTGAACAAAGTCACGTCCCAGAA...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTCCACCGGTTGTATTATaGGAGGAGGCAGAGAAATGG +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTIPPVVL*EEAEKW
Trigger: CCATTTCTCTGCCTCCTCCAATAATACAACCGGTGG...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTCAAGGTGGCAGTACTTaGATCTGTAGGGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTIQGGST*ICRVSS
Trigger: GGAAGAGACCCTACAGATCAAAGTACTGCCACCTTG...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCCAGAGGCAGCCTTTTTaGGAGCATCTCCCTCATTTA +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTQRQPF*EHLPHL
Trigger: TAAATGAGGGAGATGCTCCAAAAAAGGCTGCCTCTG...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTTCACGTTCCATGGCATaGCCACATTCAGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTISRSMA*PHSVKD
Trigger: GTCCTTCACTGAATGTGGCAATGCCATGGAACGTGA...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGGGAGTATTCTTTCCATaGCCTACCCAAGGAGATGGT +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKGVFFP*PTQGDG
Trigger: ACCATCTCCTTGGGTAGGCAATGGAAAGAATACTCC...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 90 bp AAGCTCTACACTTCCTTTTTCTTTGGGAGTGCTGTTGGTAATATTTaGTTTGGGCCAGGTAAACTCCTCAAAGCTGGTGTTTTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: KLYTSFFFGSAVGNI*FGPGKLLKAGVFLN
Trigger: GTTGAGAAAAACACCAGCTTTGAGGAGTTTACCTGGCCCAAACCAAATATTACCAACAGCACTCCCAAAGAAAAAGGAAGTGTAGAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTGCACTACGGTCTaGTTCATAGTGACACTGCTG +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTIKCTTV*FIVTLL
Trigger: CAGCAGTGTCACTATGAACAAGACCGTAGTGCACTT...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTTTGTTGTCCCATGCTaGTTTTGCAGTAAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKFVVPC*FCSKAL
Trigger: CAGGGCTTTACTGCAAAACAAGCATGGGACAACAAA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCGCCTTACATATGCAGTaGGTTTTTGTTGTCCCATGC +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTALHMQ*VFVVPC
Trigger: GCATGGGACAACAAAAACCAACTGCATATGTAAGGC...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTCTTCCTGGTCTGTGTaGGAGTCAGATGTAGATGAA +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKSSWSV*ESDVDE
Trigger: TTCATCTACATCTGACTCCAACACAGACCAGGAAGA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGGCTTGTGCTTACGTTaGCCCTTAGGGGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHGLCLR*PLGAGF
Trigger: AAAACCAGCCCCTAAGGGCAAACGTAAGCACAAGCC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGAACAGTGCATCAGCTTaGTGTTTCAGCTTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKNSASA*CFSFLA
Trigger: GGCTAAGAAGCTGAAACACAAAGCTGATGCACTGTT...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTTGTCTCTTGTCAGTTaGTCAGCCATATCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKLSLVS*SAISQC
Trigger: ACACTGGGATATGGCTGACAAACTGACAAGAGACAA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp CATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTAAGTTCTTGCTGAACTTCTaGATTCCTTCGTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: HNERELSQMSGVPPVTIKFLLNF*IPSFPF
Trigger: GAATGGGAACGAAGGAATCAAGAAGTTCAGCAAGAA...CTTAATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGGGGTGCAGAATTCTTaGGAATGCCCACCAGATGAT +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHGVQNS*ECPPDD
Trigger: ATCATCTGGTGGGCATTCCAAAGAATTCTGCACCCC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTGGAAGGCTTCAGTGTaGGAGAGATGTCAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHWKASV*ERCQLP
Trigger: AGGCAACTGACATCTCTCCAACACTGAAGCCTTCCA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCTATGCTTCAAGGCCTTaGTTTCTGGAGTTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTYASRP*FLEFSV
Trigger: CACAGAAAACTCCAGAAACAAAGGCCTTGAAGCATA...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTCTGTGTCAACTGATGTaGACAGCTTATGCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTILCQLM*TAYASR
Trigger: CCTTGAAGCATAAGCTGTCAACATCAGTTGACACAG...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCTTGGTAATATTTGGTTaGGGCCAGGTAAACTCCTCA +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTLVIFG*GQVNSS
Trigger: TGAGGAGTTTACCTGGCCCAAACCAAATATTACCAA...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTTTGCTGATGGGAGTTaGGGGTGCAGAATTCTTTGG +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHFADGS*GCRILW
Trigger: CCAAAGAATTCTGCACCCCAAACTCCCATCAGCAAA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGTGGCCACTCAGATTTaGATTTTCTGTTGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTIVATQI*IFCCCV
Trigger: TACACAGCAACAGAAAATCAAAATCTGAGTGGCCAC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTTCAACTGTACCAATTaGGGGTTGCTCAGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHFNCTN*GLLSRV
Trigger: TACCCTGCTGAGCAACCCCAAATTGGTACAGTTGAA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTGCTTACTTCACTTGTTaGCAGGATTGTGAACTTTGG +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTIAYFTC*QDCELW
Trigger: CCAAAGTTCACAATCCTGCAAACAAGTGAAGTAAGC...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTTCACCCAGAGGTTTTTaGGATTTTCATGATCCCGTA +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTISPRGF*DFHDPV
Trigger: TACGGGATCATGAAAATCCAAAAAACCTCTGGGTGA...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AACAAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCCAGCTTCTTAGCCTCTaGCATGTAAAAATCAGCATT +
Preference number: 5 (lower is better)
Translates to: NKHNERELSQMSGVPPVTQLLSL*HVKISI
Trigger: AATGCTGATTTTTACATGCAAGAGGCTAAGAAGCTG...GGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTTGATGGGAGAGACATaGTTGAGAGACACTGGGGAT +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHLMGET*LRDTGD
Trigger: ATCCCCAGTGTCTCTCAACAATGTCTCTCCCATCAA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACCAATTCCCCACTGAGTaGATGGGAGAGACATTGTTG +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHQFPTE*MGETLL
Trigger: CAACAATGTCTCTCCCATCAACTCAGTGGGGAATTG...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACGGGCATCCCCTTTGTTaGTATATTCAGCTACCTTGT +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHGHPLC*YIQLPC
Trigger: ACAAGGTAGCTGAATATACAAACAAAGGGGATGCCC...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTCTTTGGGAGTGCTGTaGGTAATATTTGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHSLGVL*VIFGLG
Trigger: GCCCAAACCAAATATTACCAACAGCACTCCCAAAGA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTACACTTCCTTTTTCTTaGGGAGTGCTGTTGGTAATA +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTITLPFS*GVLLVI
Trigger: TATTACCAACAGCACTCCCAAAGAAAAAGGAAGTGT...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp AAACATAATGAAAGAGAACTTTCCCAAATGAGTGGAGTTCCACCAGTGACCATTATATGCAGTTGGTTTTaGTTGTCCCATGCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: KHNERELSQMSGVPPVTIICSWF*LSHACF
Trigger: AAAACAAGCATGGGACAACAAAAACCAACTGCATAT...AATGGTCACTGGTGGAACTCCACTCATTTGGGAAAGTTCTCTTTCATTATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACCCACAAATAAATGACTaGTTCTGGGACGTGACTTTG +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHPQIND*FWDVTL
Trigger: CAAAGTCACGTCCCAGAACAAGTCATTTATTTGTGG...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACTTTGCTAGAGGTGATTaGTCCAGCCATGGAAATGTT +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHFARGD*SSHGNV
Trigger: AACATTTCCATGGCTGGACAAATCACCTCTAGCAAA...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS-3UTR CAA 90 bp GTTGTAGTGTCCACTTACAATGACTTCAGTTTTTCACAGATATCAAAAATGCACAAAGAGATCTTCTTCTaGCTGAACTTCTTGATTCCT +
Preference number: 5 (lower is better)
Translates to: VVVSTYNDFSFSQISKMHKEIFF*LNFLIP
Trigger: AGGAATCAAGAAGTTCAGCAAGAAGAAGATCTCTTT...GTGCATTTTTGATATCTGTGAAAAACTGAAGTCATTGTAAGTGGACACTACAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp CTCACTGGAGCTGCCAGACCCCACATTGGTTTGTGTTaGAGGCGTAGACTGTGGTGTGGCCAAGAGTGGGTT +
Preference number: 6 (lower is better)
Translates to: LTGAARPHIGLC*RRRLWCGQEWV
Trigger: AACCCACTCTTGGCCACACCACAGTCTACGCCTGCAACACAAACCAATGTGGGGTCTGGCAGCTCCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp GTCCCTGGCGAACATAGCGGACAAGATTGGTCATGCTaGTGTGCTGGGTCAGAGGCCCCATCAGTGTATCCA +
Preference number: 6 (lower is better)
Translates to: VPGEHSGQDWSC*CAGSEAPSVYP
Trigger: TGGATACACTGATGGGGCCTCTGACCCAGCACAGCAGCATGACCAATCTTGTCCGCTATGTTCGCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp CTACTCTCTGACTCACTGGAGCTGCCAGACCCCACATaGGTTTGTGTTGCAGGCGTAGACTGTGGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: LLSDSLELPDPT*VCVAGVDCGVA
Trigger: GGCCACACCACAGTCTACGCCTGCAACACAAACCAATGTGGGGTCTGGCAGCTCCAGTGAGTCAGAGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp ACAGAGTCATCAAATGTGAGCTTGGGTCTCCGGACATaGGCACTACTGCTGGACAGAAGGGGCAGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: TESSNVSLGLRT*ALLLDRRGRAA
Trigger: GGCAGCCCTGCCCCTTCTGTCCAGCAGTAGTGCCAATGTCCGGAGACCCAAGCTCACATTTGATGACTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp GATTCTGAGCTACTCTCTGACTCACTGGAGCTGCCAGACCCCACATaGGTTTGTGTTGCAGGCGTAGACTGTGGTGTGGCCAAGAGTGGG +
Preference number: 6 (lower is better)
Translates to: DSELLSDSLELPDPT*VCVAGVDCGVAKSG
Trigger: CCCACTCTTGGCCACACCACAGTCTACGCCTGCAACACAAACCAATGTGGGGTCTGGCAGCTCCAGTGAGTCAGAGAGTAGCTCAGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp GTTGAGGGTGGCTCAGGCTCTGGAGTAGCCACTCTAGGAGCCTCATaGGATTCGCTGTCAGTGGTGCTGCTTTCAGTGTCTGAGTCCGAT +
Preference number: 6 (lower is better)
Translates to: VEGGSGSGVATLGAS*DSLSVVLLSVSESD
Trigger: ATCGGACTCAGACACTGAAAGCAGCACCACTGACAGCGAATCCAATGAGGCTCCTAGAGTGGCTACTCCAGAGCCTGAGCCACCCTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp GTTGCCACTGACATTTCTGCGACGTGGAGGATCCTCTaGCAGTGGGGAAAGTGCAGGAGGGAACAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: VATDISATWRIL*QWGKCRREQLF
Trigger: GAAAAGCTGTTCCCTCCTGCACTTTCCCCACTGGCAGAGGATCCTCCACGTCGCAGAAATGTCAGTGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp CAGAGGGACATGAGGCCTTGGCTCTTTCCTAGGCACTaGTTTGTGGGCAGTAGCTTTGTTTCGGCTTCGTGG +
Preference number: 6 (lower is better)
Translates to: QRDMRPWLFPRH*FVGSSFVSASW
Trigger: CCACGAAGCCGAAACAAAGCTACTGCCCACAAACCAGTGCCTAGGAAAGAGCCAAGGCCTCATGTCCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp CTTCTTCTTCTCAGTGGCCAGAGGGACATGAGGCCTTaGCTCTTTCCTAGGCACTGGTTTGTGGGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: LLLLSGQRDMRP*LFPRHWFVGSS
Trigger: GCTACTGCCCACAAACCAGTGCCTAGGAAAGAGCCAAGGCCTCATGTCCCTCTGGCCACTGAGAAGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp GGCTCAGGCTCTGGAGTAGCCACTCTAGGAGCCTCATaGGATTCGCTGTCAGTGGTGCTGCTTTCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: GSGSGVATLGAS*DSLSVVLLSVS
Trigger: AGACACTGAAAGCAGCACCACTGACAGCGAATCCAATGAGGCTCCTAGAGTGGCTACTCCAGAGCCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS TCA 72 bp GGTGGGTCTTGTGTGGATGTCTGCATCTTGTTTGGTTaGCTGCTGGTCTGGCTTGCTTGTGCAGGGCTAGTG +
Preference number: 6 (lower is better)
Translates to: GGSCVDVCILFG*LLVWLACAGLV
Trigger: CACTAGCCCTGCACAAGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAGACATCCACACAAGACCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp GCCACAGCCTGGCTAGGGTTTGGTTTCACTTTGACCTaGACCTCCACCGGTTGTATTATTGGAGGAGGCAGA +
Preference number: 6 (lower is better)
Translates to: ATAWLGFGFTLT*TSTGCIIGGGR
Trigger: TCTGCCTCCTCCAATAATACAACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCCTAGCCAGGCTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp CTAAGGAGAGGCCTTTCTTTGGGTACAGCCACAGCCTaGCTAGGGTTTGGTTTCACTTTGACCTGGACCTCC +
Preference number: 6 (lower is better)
Translates to: LRRGLSLGTATA*LGFGFTLTWTS
Trigger: GGAGGTCCAGGTCAAAGTGAAACCAAACCCTAGCCAGGCTGTGGCTGTACCCAAAGAAAGGCCTCTCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp GGCTCTTTCCTAGGCACTGGTTTGTGGGCAGTAGCTTaGTTTCGGCTTCGTGGTGGGTCAGGAAGCTCTACA +
Preference number: 6 (lower is better)
Translates to: GSFLGTGLWAVA*FRLRGGSGSST
Trigger: TGTAGAGCTTCCTGACCCACCACGAAGCCGAAACAAAGCTACTGCCCACAAACCAGTGCCTAGGAAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp GGGGACTTCGCTTCCAGAGGATCACGTTCCATGGCATaGCCACATTCAGTGAAGGACAAGGCTGCATCTGCA +
Preference number: 6 (lower is better)
Translates to: GDFASRGSRSMA*PHSVKDKAASA
Trigger: TGCAGATGCAGCCTTGTCCTTCACTGAATGTGGCAATGCCATGGAACGTGATCCTCTGGAAGCGAAGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp GCATGGCAGGAGGCGGGGAAAAAGCTGTCTCCTCATTaGTGGTGGATAAGTTGTTGCTGTTGCCATTGGTCA +
Preference number: 6 (lower is better)
Translates to: AWQEAGKKLSPH*WWISCCCCHWS
Trigger: TGACCAATGGCAACAGCAACAACTTATCCACCAGCAATGAGGAGACAGCTTTTTCCCCGCCTCCTGCCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp TTGAGGTGGGTCTTGTGTGGATGTCTGCATCTTGTTTaGTTGACTGCTGGTCTGGCTTGCTTGTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: LRWVLCGCLHLV*LTAGLACLCRA
Trigger: AGCCCTGCACAAGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAGACATCCACACAAGACCCACCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp TGTCTGAGTCCGATTCTGAGCTACTCTCTGACTCACTaGAGCTGCCAGACCCCACATTGGTTTGTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: CLSPILSYSLTH*SCQTPHWFVLQ
Trigger: CTGCAACACAAACCAATGTGGGGTCTGGCAGCTCCAGTGAGTCAGAGAGTAGCTCAGAATCGGACTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp CCTTTCTTTGGGTACAGCCACAGCCTGGCTAGGGTTTaGTTTCACTTTGACCTGGACCTCCACCGGTTGTAT +
Preference number: 6 (lower is better)
Translates to: PFFGYSHSLARV*FHFDLDLHRLY
Trigger: ATACAACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCCTAGCCAGGCTGTGGCTGTACCCAAAGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp CAGGAGGCGGGGAAAAAGCTGTCTCCTCATTGCTGGTaGATAAGTTGTTGCTGTTGCCATTGGTCAAGGTGC +
Preference number: 6 (lower is better)
Translates to: QEAGKKLSPHCW*ISCCCCHWSRC
Trigger: GCACCTTGACCAATGGCAACAGCAACAACTTATCCACCAGCAATGAGGAGACAGCTTTTTCCCCGCCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp TGGCAGGAGGCGGGGAAAAAGCTGTCTCCTCATTGCTaGTGGATAAGTTGTTGCTGTTGCCATTGGTCAAGG +
Preference number: 6 (lower is better)
Translates to: WQEAGKKLSPHC*WISCCCCHWSR
Trigger: CCTTGACCAATGGCAACAGCAACAACTTATCCACCAGCAATGAGGAGACAGCTTTTTCCCCGCCTCCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp TTCTGCTGGCTTGTGCTTACGTTTGCCCTTAGGGGCTaGTTTTTCCACAGCTGTGGCAGCAGTTTGACGCTT +
Preference number: 6 (lower is better)
Translates to: FCWLVLTFALRG*FFHSCGSSLTL
Trigger: AAGCGTCAAACTGCTGCCACAGCTGTGGAAAAACCAGCCCCTAAGGGCAAACGTAAGCACAAGCCAGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp AGGTGGGTCTTGTGTGGATGTCTGCATCTTGTTTGGTaGACTGCTGGTCTGGCTTGCTTGTGCAGGGCTAGT +
Preference number: 6 (lower is better)
Translates to: RWVLCGCLHLVW*TAGLACLCRAS
Trigger: ACTAGCCCTGCACAAGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAGACATCCACACAAGACCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp TTTGAGGTGGGTCTTGTGTGGATGTCTGCATCTTGTTaGGTTGACTGCTGGTCTGGCTTGCTTGTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: FEVGLVWMSASC*VDCWSGLLVQG
Trigger: GCCCTGCACAAGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAGACATCCACACAAGACCCACCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp GGTACAGCCACAGCCTGGCTAGGGTTTGGTTTCACTTaGACCTGGACCTCCACCGGTTGTATTATTGGAGGA +
Preference number: 6 (lower is better)
Translates to: GTATAWLGFGFT*TWTSTGCIIGG
Trigger: TCCTCCAATAATACAACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCCTAGCCAGGCTGTGGCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp CTTAGGGGCTGGTTTTTCCACAGCTGTGGCAGCAGTTaGACGCTTGGGTTTAGAGGCAGTCTCCTTGTAGTC +
Preference number: 6 (lower is better)
Translates to: LRGWFFHSCGSS*TLGFRGSLLVV
Trigger: GACTACAAGGAGACTGCCTCTAAACCCAAGCGTCAAACTGCTGCCACAGCTGTGGAAAAACCAGCCCCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp AGCCTGGCTAGGGTTTGGTTTCACTTTGACCTGGACCTCCACCGGTaGTATTATTGGAGGAGGCAGAGAAATGGTCTCTGTGGGTGTCTC +
Preference number: 6 (lower is better)
Translates to: SLARVWFHFDLDLHR*YYWRRQRNGLCGCL
Trigger: GAGACACCCACAGAGACCATTTCTCTGCCTCCTCCAATAATACAACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCCTAGCCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp ACGTTTGCCCTTAGGGGCTGGTTTTTCCACAGCTGTGGCAGCAGTTaGACGCTTGGGTTTAGAGGCAGTCTCCTTGTAGTCTGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: TFALRGWFFHSCGSS*TLGFRGSLLVVCLC
Trigger: GCAAAGACAGACTACAAGGAGACTGCCTCTAAACCCAAGCGTCAAACTGCTGCCACAGCTGTGGAAAAACCAGCCCCTAAGGGCAAACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp TTGTTCTGGGACGTGACTTTGTTCAGCCATTTGTCTAGCTGCCATTaGTTGGTTGAGGGTGGCTCAGGCTCTGGAGTAGCCACTCTAGGA +
Preference number: 6 (lower is better)
Translates to: LFWDVTLFSHLSSCH*LVEGGSGSGVATLG
Trigger: TCCTAGAGTGGCTACTCCAGAGCCTGAGCCACCCTCAACCAACAAATGGCAGCTAGACAAATGGCTGAACAAAGTCACGTCCCAGAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp CTTTCTTTGGGTACAGCCACAGCCTGGCTAGGGTTTGGTTTCACTTaGACCTGGACCTCCACCGGTTGTATTATTGGAGGAGGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: LSLGTATAWLGFGFT*TWTSTGCIIGGGRE
Trigger: TTCTCTGCCTCCTCCAATAATACAACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCCTAGCCAGGCTGTGGCTGTACCCAAAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp AGCTCAGTTTGCATGGCAGGAGGCGGGGAAAAAGCTGTCTCCTCATaGCTGGTGGATAAGTTGTTGCTGTTGCCATTGGTCAAGGTGCTA +
Preference number: 6 (lower is better)
Translates to: SSVCMAGGGEKAVSS*LVDKLLLLPLVKVL
Trigger: TAGCACCTTGACCAATGGCAACAGCAACAACTTATCCACCAGCAATGAGGAGACAGCTTTTTCCCCGCCTCCTGCCATGCAAACTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp CATCTTGTTTGGTTGACTGCTGGTCTGGCTTGCTTGTaGAGGGCTAGTGTTATGACTATCTCGTGGCCACTC +
Preference number: 6 (lower is better)
Translates to: HLVWLTAGLACL*RASVMTISWPL
Trigger: GAGTGGCCACGAGATAGTCATAACACTAGCCCTGCACAAGCAAGCCAGACCAGCAGTCAACCAAACAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp TTGCCTTTTCAACAGCCTGGTAAAGCTCGTTGGCTGTaGACTGTGTGGTCAAGGTCTTCACAGGCTCAAGGT +
Preference number: 6 (lower is better)
Translates to: LPFQQPGKARWL*TVWSRSSQAQG
Trigger: ACCTTGAGCCTGTGAAGACCTTGACCACACAGTGCACAGCCAACGAGCTTTACCAGGCTGTTGAAAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp TTCTGGGACGTGACTTTGTTCAGCCATTTGTCTAGCTaGCATTTGTTGGTTGAGGGTGGCTCAGGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: FWDVTLFSHLSS*HLLVEGGSGSG
Trigger: TCCAGAGCCTGAGCCACCCTCAACCAACAAATGGCAGCTAGACAAATGGCTGAACAAAGTCACGTCCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp CAACAGCCTGGTAAAGCTCGTTGGCTGTGCACTGTGTaGTCAAGGTCTTCACAGGCTCAAGGTCATCTTCAT +
Preference number: 6 (lower is better)
Translates to: QQPGKARWLCTV*SRSSQAQGHLH
Trigger: ATGAAGATGACCTTGAGCCTGTGAAGACCTTGACCACACAGTGCACAGCCAACGAGCTTTACCAGGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp ACTGACATTTCTGCGACGTGGAGGATCCTCTGCCAGTaGGGAAAGTGCAGGAGGGAACAGCTTTTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: TDISATWRILCQ*GKCRREQLFFF
Trigger: AAAGAAGAAAAGCTGTTCCCTCCTGCACTTTCCCCACTGGCAGAGGATCCTCCACGTCGCAGAAATGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp TCTGGTTTGAGGTGGGTCTTGTGTGGATGTCTGCATCTTGTTTGGTaGACTGCTGGTCTGGCTTGCTTGTGCAGGGCTAGTGTTATGACT +
Preference number: 6 (lower is better)
Translates to: SGLRWVLCGCLHLVW*TAGLACLCRASVMT
Trigger: AGTCATAACACTAGCCCTGCACAAGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAGACATCCACACAAGACCCACCTCAAACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp CTGGTCCTGCCCATCCATGGGCCTTACATATGCAGTTGGTTTTTGTaGTCCCATGCTTGTTTTGCAGTAAAGCCCTGGTGGGAATGTTGG +
Preference number: 6 (lower is better)
Translates to: LVLPIHGPYICSWFL*SHACFAVKPWWECW
Trigger: CCAACATTCCCACCAGGGCTTTACTGCAAAACAAGCATGGGACAACAAAAACCAACTGCATATGTAAGGCCCATGGATGGGCAGGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp CTAGCAGCCATATGGTGGATGCGCTGGGGAATTGTGACAGGGCCATaGTTACAATTCCCCACTGAGTTGATGGGAGAGACATTGTTGAGA +
Preference number: 6 (lower is better)
Translates to: LAAIWWMRWGIVTGP*LQFPTELMGETLLR
Trigger: TCTCAACAATGTCTCTCCCATCAACTCAGTGGGGAATTGTAACAATGGCCCTGTCACAATTCCCCAGCGCATCCACCATATGGCTGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp TGTCTGCATCTTGTTTGGTTGACTGCTGGTCTGGCTTaGTTGTGCAGGGCTAGTGTTATGACTATCTCGTGG +
Preference number: 6 (lower is better)
Translates to: CLHLVWLTAGLA*LCRASVMTISW
Trigger: CCACGAGATAGTCATAACACTAGCCCTGCACAAGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp TTGGAGAGATGTCAGTTGCCTGGTCCTGCCCATCCATaGGCCTTACATATGCAGTTGGTTTTTGTTGTCCCA +
Preference number: 6 (lower is better)
Translates to: LERCQLPGPAHP*ALHMQLVFVVP
Trigger: TGGGACAACAAAAACCAACTGCATATGTAAGGCCCATGGATGGGCAGGACCAGGCAACTGACATCTCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp ATATTCACATGGCTAGCAGCCATATGGTGGATGCGCTaGGGAATTGTGACAGGGCCATTGTTACAATTCCCC +
Preference number: 6 (lower is better)
Translates to: IFTWLAAIWWMR*GIVTGPLLQFP
Trigger: GGGGAATTGTAACAATGGCCCTGTCACAATTCCCCAGCGCATCCACCATATGGCTGCTAGCCATGTGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp CATCACTGCTCAGCTTCAAGTCATCCTCAAGCATCTTaGTGGAAGCTCTGCTGCTTGGGTCGCTCCACTTTT +
Preference number: 6 (lower is better)
Translates to: HHCSASSHPQAS*WKLCCLGRSTF
Trigger: AAAAGTGGAGCGACCCAAGCAGCAGAGCTTCCACAAAGATGCTTGAGGATGACTTGAAGCTGAGCAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp ATATGGTGGATGCGCTGGGGAATTGTGACAGGGCCATaGTTACAATTCCCCACTGAGTTGATGGGAGAGACA +
Preference number: 6 (lower is better)
Translates to: IWWMRWGIVTGP*LQFPTELMGET
Trigger: TGTCTCTCCCATCAACTCAGTGGGGAATTGTAACAATGGCCCTGTCACAATTCCCCAGCGCATCCACCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp TGTGGATGTCTGCATCTTGTTTGGTTGACTGCTGGTCTGGCTTGCTaGTGCAGGGCTAGTGTTATGACTATCTCGTGGCCACTCAGATTT +
Preference number: 6 (lower is better)
Translates to: CGCLHLVWLTAGLAC*CRASVMTISWPLRF
Trigger: AAATCTGAGTGGCCACGAGATAGTCATAACACTAGCCCTGCACAAGCAAGCCAGACCAGCAGTCAACCAAACAAGATGCAGACATCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp CTTGGTCGAGCTTTTTCCCTAATAAGACTAAGGAGAGGCCTTTCTTaGGGTACAGCCACAGCCTGGCTAGGGTTTGGTTTCACTTTGACC +
Preference number: 6 (lower is better)
Translates to: LGRAFSLIRLRRGLS*GTATAWLGFGFTLT
Trigger: GGTCAAAGTGAAACCAAACCCTAGCCAGGCTGTGGCTGTACCCAAAGAAAGGCCTCTCCTTAGTCTTATTAGGGAAAAAGCTCGACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS TCA 72 bp CTGCTGGTCTGGCTTGCTTGTGCAGGGCTAGTGTTATaGCTATCTCGTGGCCACTCAGATTTTGATTTTCTG +
Preference number: 6 (lower is better)
Translates to: LLVWLACAGLVL*LSRGHSDFDFL
Trigger: CAGAAAATCAAAATCTGAGTGGCCACGAGATAGTCATAACACTAGCCCTGCACAAGCAAGCCAGACCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp AGAAGTCTTCCAGTCTGGTTTGAGGTGGGTCTTGTGTaGATGTCTGCATCTTGTTTGGTTGACTGCTGGTCT +
Preference number: 6 (lower is better)
Translates to: RSLPVWFEVGLV*MSASCLVDCWS
Trigger: AGACCAGCAGTCAACCAAACAAGATGCAGACATCCACACAAGACCCACCTCAAACCAGACTGGAAGACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp CCCATCCATGGGCCTTACATATGCAGTTGGTTTTTGTaGTCCCATGCTTGTTTTGCAGTAAAGCCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: PIHGPYICSWFL*SHACFAVKPWW
Trigger: CCACCAGGGCTTTACTGCAAAACAAGCATGGGACAACAAAAACCAACTGCATATGTAAGGCCCATGGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp CTGCCCATCCATGGGCCTTACATATGCAGTTGGTTTTaGTTGTCCCATGCTTGTTTTGCAGTAAAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LPIHGPYICSWF*LSHACFAVKPW
Trigger: CCAGGGCTTTACTGCAAAACAAGCATGGGACAACAAAAACCAACTGCATATGTAAGGCCCATGGATGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp AGGGTTTGGTTTCACTTTGACCTGGACCTCCACCGGTaGTATTATTGGAGGAGGCAGAGAAATGGTCTCTGT +
Preference number: 6 (lower is better)
Translates to: RVWFHFDLDLHR*YYWRRQRNGLC
Trigger: ACAGAGACCATTTCTCTGCCTCCTCCAATAATACAACCGGTGGAGGTCCAGGTCAAAGTGAAACCAAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp GCTTTTTCCCTAATAAGACTAAGGAGAGGCCTTTCTTaGGGTACAGCCACAGCCTGGCTAGGGTTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: AFSLIRLRRGLS*GTATAWLGFGF
Trigger: GAAACCAAACCCTAGCCAGGCTGTGGCTGTACCCAAAGAAAGGCCTCTCCTTAGTCTTATTAGGGAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp CGTGGTGGGTCAGGAAGCTCTACACTTCCTTTTTCTTaGGGAGTGCTGTTGGTAATATTTGGTTTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: RGGSGSSTLPFS*GVLLVIFGLGQ
Trigger: CTGGCCCAAACCAAATATTACCAACAGCACTCCCAAAGAAAAAGGAAGTGTAGAGCTTCCTGACCCACCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp GGGGAAAAAGCTGTCTCCTCATTGCTGGTGGATAAGTaGTTGCTGTTGCCATTGGTCAAGGTGCTAAGTGTC +
Preference number: 6 (lower is better)
Translates to: GEKAVSSLLVDK*LLLPLVKVLSV
Trigger: GACACTTAGCACCTTGACCAATGGCAACAGCAACAACTTATCCACCAGCAATGAGGAGACAGCTTTTTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp AGAGGTTTCCAAAACTGTTCTCAAATTCAATGGAAGGCTTCAGTGTaGGAGAGATGTCAGTTGCCTGGTCCTGCCCATCCATGGGCCTTA +
Preference number: 6 (lower is better)
Translates to: RGFQNCSQIQWKASV*ERCQLPGPAHPWAL
Trigger: TAAGGCCCATGGATGGGCAGGACCAGGCAACTGACATCTCTCCAACACTGAAGCCTTCCATTGAATTTGAGAACAGTTTTGGAAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp TTTCGGCTTCGTGGTGGGTCAGGAAGCTCTACACTTCCTTTTTCTTaGGGAGTGCTGTTGGTAATATTTGGTTTGGGCCAGGTAAACTCC +
Preference number: 6 (lower is better)
Translates to: FRLRGGSGSSTLPFS*GVLLVIFGLGQVNS
Trigger: GGAGTTTACCTGGCCCAAACCAAATATTACCAACAGCACTCCCAAAGAAAAAGGAAGTGTAGAGCTTCCTGACCCACCACGAAGCCGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp GGGCCATTGTTACAATTCCCCACTGAGTTGATGGGAGAGACATTGTaGAGAGACACTGGGGATGGAGTATTCTTTCCATTGCCTACCCAA +
Preference number: 6 (lower is better)
Translates to: GPLLQFPTELMGETL*RDTGDGVFFPLPTQ
Trigger: TTGGGTAGGCAATGGAAAGAATACTCCATCCCCAGTGTCTCTCAACAATGTCTCTCCCATCAACTCAGTGGGGAATTGTAACAATGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp ACAGGGCCATTGTTACAATTCCCCACTGAGTTGATGGGAGAGACATaGTTGAGAGACACTGGGGATGGAGTATTCTTTCCATTGCCTACC +
Preference number: 6 (lower is better)
Translates to: TGPLLQFPTELMGET*LRDTGDGVFFPLPT
Trigger: GGTAGGCAATGGAAAGAATACTCCATCCCCAGTGTCTCTCAACAATGTCTCTCCCATCAACTCAGTGGGGAATTGTAACAATGGCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp CATCCATGGGCCTTACATATGCAGTTGGTTTTTGTTGTCCCATGCTaGTTTTGCAGTAAAGCCCTGGTGGGAATGTTGGAACTGAAAGGC +
Preference number: 6 (lower is better)
Translates to: HPWALHMQLVFVVPC*FCSKALVGMLELKG
Trigger: GCCTTTCAGTTCCAACATTCCCACCAGGGCTTTACTGCAAAACAAGCATGGGACAACAAAAACCAACTGCATATGTAAGGCCCATGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp AGGGTAGACAAAGAAGTCTTCCAGTCTGGTTTGAGGTaGGTCTTGTGTGGATGTCTGCATCTTGTTTGGTTG +
Preference number: 6 (lower is better)
Translates to: RVDKEVFQSGLR*VLCGCLHLVWL
Trigger: CAACCAAACAAGATGCAGACATCCACACAAGACCCACCTCAAACCAGACTGGAAGACTTCTTTGTCTACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp TTGTGTTGCAGGCGTAGACTGTGGTGTGGCCAAGAGTaGGTTCACAGGATTATTCTTAGGTTTTGCCTTTTC +
Preference number: 6 (lower is better)
Translates to: LCCRRRLWCGQE*VHRIILRFCLF
Trigger: GAAAAGGCAAAACCTAAGAATAATCCTGTGAACCCACTCTTGGCCACACCACAGTCTACGCCTGCAACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp GGAGGCAGAGAAATGGTCTCTGTGGGTGTCTCATTTTaGCCACAAATAAATGACTTGTTCTGGGACGTGACT +
Preference number: 6 (lower is better)
Translates to: GGREMVSVGVSF*PQINDLFWDVT
Trigger: AGTCACGTCCCAGAACAAGTCATTTATTTGTGGCCAAAATGAGACACCCACAGAGACCATTTCTCTGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp TTACTGGTAATATTCACATGGCTAGCAGCCATATGGTaGATGCGCTGGGGAATTGTGACAGGGCCATTGTTA +
Preference number: 6 (lower is better)
Translates to: LLVIFTWLAAIW*MRWGIVTGPLL
Trigger: TAACAATGGCCCTGTCACAATTCCCCAGCGCATCCACCATATGGCTGCTAGCCATGTGAATATTACCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp CAAAACTGTTCTCAAATTCAATGGAAGGCTTCAGTGTaGGAGAGATGTCAGTTGCCTGGTCCTGCCCATCCA +
Preference number: 6 (lower is better)
Translates to: QNCSQIQWKASV*ERCQLPGPAHP
Trigger: TGGATGGGCAGGACCAGGCAACTGACATCTCTCCAACACTGAAGCCTTCCATTGAATTTGAGAACAGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp CAAGGTGGCAGTACTTTGATCTGTAGGGTCTCTTCCTGGTCTGTGTaGGAGTCAGATGTAGATGAATCTGTTTCAATAAATTCCCGGGAC +
Preference number: 6 (lower is better)
Translates to: QGGSTLICRVSSWSV*ESDVDESVSINSRD
Trigger: GTCCCGGGAATTTATTGAAACAGATTCATCTACATCTGACTCCAACACAGACCAGGAAGAGACCCTACAGATCAAAGTACTGCCACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS TCA 72 bp GAGGTGATTTGTCCAGCCATGGAAATGTTTTTGTCCTaGCCGAAATGCCCATTGTTGCCACTGACATTTCTG +
Preference number: 6 (lower is better)
Translates to: EVICPAMEMFLS*PKCPLLPLTFL
Trigger: CAGAAATGTCAGTGGCAACAATGGGCATTTCGGTCAGGACAAAAACATTTCCATGGCTGGACAAATCACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp AAAGCTTGCTTCACTTTTGCTGATGGGAGTTTGGGGTaGAGAATTCTTTGGAATGCCCACCAGATGATTCTG +
Preference number: 6 (lower is better)
Translates to: KACFTFADGSLG*RILWNAHQMIL
Trigger: CAGAATCATCTGGTGGGCATTCCAAAGAATTCTGCACCCCAAACTCCCATCAGCAAAAGTGAAGCAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp AAAACTGTTCTCAAATTCAATGGAAGGCTTCAGTGTTaGAGAGATGTCAGTTGCCTGGTCCTGCCCATCCAT +
Preference number: 6 (lower is better)
Translates to: KTVLKFNGRLQC*RDVSCLVLPIH
Trigger: ATGGATGGGCAGGACCAGGCAACTGACATCTCTCCAACACTGAAGCCTTCCATTGAATTTGAGAACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp TCCTTGGATTTAGAAGTAATGCAAGGTGGCAGTACTTaGATCTGTAGGGTCTCTTCCTGGTCTGTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: SLDLEVMQGGST*ICRVSSWSVLE
Trigger: CTCCAACACAGACCAGGAAGAGACCCTACAGATCAAAGTACTGCCACCTTGCATTACTTCTAAATCCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp GAAATGGTCTCTGTGGGTGTCTCATTTTGGCCACAAATAAATGACTaGTTCTGGGACGTGACTTTGTTCAGCCATTTGTCTAGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: EMVSVGVSFWPQIND*FWDVTLFSHLSSCH
Trigger: ATGGCAGCTAGACAAATGGCTGAACAAAGTCACGTCCCAGAACAAGTCATTTATTTGTGGCCAAAATGAGACACCCACAGAGACCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp CCATTGGTCAAGGTGCTAAGTGTCAGGCTGGCATTAGAAGTTTCCTaGGATTTAGAAGTAATGCAAGGTGGCAGTACTTTGATCTGTAGG +
Preference number: 6 (lower is better)
Translates to: PLVKVLSVRLALEVS*DLEVMQGGSTLICR
Trigger: CCTACAGATCAAAGTACTGCCACCTTGCATTACTTCTAAATCCAAGGAAACTTCTAATGCCAGCCTGACACTTAGCACCTTGACCAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS TCA 72 bp CTCCACTTTTGTAAGGTAAATCCTGGAGTCAGATGCTaGGATTCCCGCAAGATTTCTTCAACACAGCTTGGA +
Preference number: 6 (lower is better)
Translates to: LHFCKVNPGVRC*DSRKISSTQLG
Trigger: TCCAAGCTGTGTTGAAGAAATCTTGCGGGAATCTCAGCATCTGACTCCAGGATTTACCTTACAAAAGTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp TTCCATGGCATTGCCACATTCAGTGAAGGACAAGGCTaGATCTGCATAATTCACAGCTTTGCCAAATTTCTC +
Preference number: 6 (lower is better)
Translates to: FHGIATFSEGQG*ICIIHSFAKFL
Trigger: GAGAAATTTGGCAAAGCTGTGAATTATGCAGATGCAGCCTTGTCCTTCACTGAATGTGGCAATGCCATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp ATGCTGAGATTCCCGCAAGATTTCTTCAACACAGCTTaGATCACTGGTAAGGCTTACTTCACTTGTTTGCAG +
Preference number: 6 (lower is better)
Translates to: MLRFPQDFFNTA*ITGKAYFTCLQ
Trigger: CTGCAAACAAGTGAAGTAAGCCTTACCAGTGATCCAAGCTGTGTTGAAGAAATCTTGCGGGAATCTCAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CCA 72 bp GGTGTCTCATTTTGGCCACAAATAAATGACTTGTTCTaGGACGTGACTTTGTTCAGCCATTTGTCTAGCTGC +
Preference number: 6 (lower is better)
Translates to: GVSFWPQINDLF*DVTLFSHLSSC
Trigger: GCAGCTAGACAAATGGCTGAACAAAGTCACGTCCCAGAACAAGTCATTTATTTGTGGCCAAAATGAGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp GATGTAGATGAATCTGTTTCAATAAATTCCCGGGACTaGGGGACAATCTTCCCAGGCCCTCTATACTTCTTC +
Preference number: 6 (lower is better)
Translates to: DVDESVSINSRD*GTIFPGPLYFF
Trigger: GAAGAAGTATAGAGGGCCTGGGAAGATTGTCCCCAAGTCCCGGGAATTTATTGAAACAGATTCATCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp TTGTTACAATTCCCCACTGAGTTGATGGGAGAGACATaGTTGAGAGACACTGGGGATGGAGTATTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: LLQFPTELMGET*LRDTGDGVFFP
Trigger: TGGAAAGAATACTCCATCCCCAGTGTCTCTCAACAATGTCTCTCCCATCAACTCAGTGGGGAATTGTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS GCA 72 bp AATAAAGATGAGGCAACTAGGGGAGACCCAGGTGCTTaGACTGTAAATTCAGATTCTTCTGGTGAATTAGAC +
Preference number: 6 (lower is better)
Translates to: NKDEATRGDPGA*TVNSDSSGELD
Trigger: GTCTAATTCACCAGAAGAATCTGAATTTACAGTGCAAGCACCTGGGTCTCCCCTAGTTGCCTCATCTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp TCTGTGGGTGTCTCATTTTGGCCACAAATAAATGACTaGTTCTGGGACGTGACTTTGTTCAGCCATTTGTCT +
Preference number: 6 (lower is better)
Translates to: SVGVSFWPQIND*FWDVTLFSHLS
Trigger: AGACAAATGGCTGAACAAAGTCACGTCCCAGAACAAGTCATTTATTTGTGGCCAAAATGAGACACCCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp AAGGTGCTAAGTGTCAGGCTGGCATTAGAAGTTTCCTaGGATTTAGAAGTAATGCAAGGTGGCAGTACTTTG +
Preference number: 6 (lower is better)
Translates to: KVLSVRLALEVS*DLEVMQGGSTL
Trigger: CAAAGTACTGCCACCTTGCATTACTTCTAAATCCAAGGAAACTTCTAATGCCAGCCTGACACTTAGCACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp TTAGAAGTTTCCTTGGATTTAGAAGTAATGCAAGGTGGCAGTACTTaGATCTGTAGGGTCTCTTCCTGGTCTGTGTTGGAGTCAGATGTA +
Preference number: 6 (lower is better)
Translates to: LEVSLDLEVMQGGST*ICRVSSWSVLESDV
Trigger: TACATCTGACTCCAACACAGACCAGGAAGAGACCCTACAGATCAAAGTACTGCCACCTTGCATTACTTCTAAATCCAAGGAAACTTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 72 bp TTCCAATTGTCCTTTGAGAAACTGTGTCAACTGATGTaGACAGCTTATGCTTCAAGGCCTTTGTTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: FQLSFEKLCQLM*TAYASRPLFLE
Trigger: CTCCAGAAACAAAGGCCTTGAAGCATAAGCTGTCAACATCAGTTGACACAGTTTCTCAAAGGACAATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp GCTGTTTCTTTCCAATTGTCCTTTGAGAAACTGTGTCAACTGATGTaGACAGCTTATGCTTCAAGGCCTTTGTTTCTGGAGTTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: AVSFQLSFEKLCQLM*TAYASRPLFLEFSV
Trigger: CACAGAAAACTCCAGAAACAAAGGCCTTGAAGCATAAGCTGTCAACATCAGTTGACACAGTTTCTCAAAGGACAATTGGAAAGAAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7
CDS CAA 90 bp TCTACACTTCCTTTTTCTTTGGGAGTGCTGTTGGTAATATTTGGTTaGGGCCAGGTAAACTCCTCAAAGCTGGTGTTTTTCTCAACTTTT +
Preference number: 6 (lower is better)
Translates to: STLPFSLGVLLVIFG*GQVNSSKLVFFSTF
Trigger: AAAAGTTGAGAAAAACACCAGCTTTGAGGAGTTTACCTGGCCCAAACCAAATATTACCAACAGCACTCCCAAAGAAAAAGGAAGTGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033532.7