Pregenerated sensors for AFAP1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033032Ensembl transcript IDs: ENSMUST00000120472.2, ENSMUST00000154876.8
Found 217 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGCTCACGGACAGACCGAGGGCCGGACCCCCGGCCAGGGACTGCTaGAAGCGCTCCTTCACAGCTACCAGCTTGAGCTCCAGGTCGATC | + |
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Preference number: 1 (lower is better) Translates to: LLTDRPRAGPPARDC*KRSFTATSLSSRSI Trigger: GATCGACCTGGAGCTCAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCCGGGGGTCCGGCCCTCGGTCTGTCCGTGAGCAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR GCA 90 bp | TTGTTGCTCACGGACAGACCGAGGGCCGGACCCCCGGCCAGGGACTaGTGCAAGCGCTCCTTCACAGCTACCAGCTTGAGCTCCAGGTCG | + |
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Preference number: 1 (lower is better) Translates to: LLLTDRPRAGPPARD*CKRSFTATSLSSRS Trigger: CGACCTGGAGCTCAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCCGGGGGTCCGGCCCTCGGTCTGTCCGTGAGCAACAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR TCA 90 bp | AGCTTGCCTCCAGGATGGCCACCTCCTGTCGATTGCGCAGGATCCTaGAGGCAAAGGGGTGCCTGGGTCCAAAGCCTGGGGCTACCTCGC | + |
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Preference number: 1 (lower is better) Translates to: SLPPGWPPPVDCAGS*RQRGAWVQSLGLPR Trigger: GCGAGGTAGCCCCAGGCTTTGGACCCAGGCACCCCTTTGCCTTCAGGATCCTGCGCAATCGACAGGAGGTGGCCATCCTGGAGGCAAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR TCA 90 bp | CCCCGGCCAGGGACTGCTGCAAGCGCTCCTTCACAGCTACCAGCTTaGGCTCCAGGTCGATCCTCTGCTCTTCCTTGGCACGGCATTGAG | + |
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Preference number: 1 (lower is better) Translates to: PRPGTAASAPSQLPA*APGRSSALPWHGIE Trigger: CTCAATGCCGTGCCAAGGAAGAGCAGAGGATCGACCTGGAGCTCAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CCA 90 bp | ATTGCGCAGGATCCTGAAGGCAAAGGGGTGCCTGGGTCCAAAGCCTaGGGCTACCTCGCAGCCCCTGAGGGCTATGGAATTCACGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: IAQDPEGKGVPGSKA*GYLAAPEGYGIHVG Trigger: ACCCACGTGAATTCCATAGCCCTCAGGGGCTGCGAGGTAGCCCCAGGCTTTGGACCCAGGCACCCCTTTGCCTTCAGGATCCTGCGCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CCA 90 bp | GGTCGATCCTCTGCTCTTCCTTGGCACGGCATTGAGCTTCCAGAGTaGCCACGGCCTCTTCCAAGGCCTTCGACTTTGCTCCTGGGTTGT | + |
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Preference number: 1 (lower is better) Translates to: GRSSALPWHGIELPE*PRPLPRPSTLLLGC Trigger: ACAACCCAGGAGCAAAGTCGAAGGCCTTGGAAGAGGCCGTGGCCACTCTGGAAGCTCAATGCCGTGCCAAGGAAGAGCAGAGGATCGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR TCA 90 bp | GTTTCTCTTGGGACAACCTCTTGTCCTGATCCGCCTTGCATAGGATaGCTGGGGATCTGGGGACCTCCAAGCCCTCTGCTCCCACAATGG | + |
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Preference number: 1 (lower is better) Translates to: VSLGTTSCPDPPCIG*LGIWGPPSPLLPQW Trigger: CCATTGTGGGAGCAGAGGGCTTGGAGGTCCCCAGATCCCCAGTCATCCTATGCAAGGCGGATCAGGACAAGAGGTTGTCCCAAGAGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR GCA 90 bp | GTTCACAGGCTTCTCGACGGCCGAGAGTGGAACCACTGTCATTCATaGCCAGGCTGTCGGAGTCTGAGTTCTGTTTCTCTTGGGACAACC | + |
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Preference number: 1 (lower is better) Translates to: VHRLLDGREWNHCHS*PGCRSLSSVSLGTT Trigger: GGTTGTCCCAAGAGAAACAGAACTCAGACTCCGACAGCCTGGGCATGAATGACAGTGGTTCCACTCTCGGCCGTCGAGAAGCCTGTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CCA 90 bp | CGGCCTCTTCCAAGGCCTTCGACTTTGCTCCTGGGTTGTTCCGAATaGCTTCCTTCAGCTCTTTCTTCTCCTGTCGCAAGGCCGTCAGTT | + |
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Preference number: 1 (lower is better) Translates to: RPLPRPSTLLLGCSE*LPSALSSPVARPSV Trigger: AACTGACGGCCTTGCGACAGGAGAAGAAAGAGCTGAAGGAAGCCATTCGGAACAACCCAGGAGCAAAGTCGAAGGCCTTGGAAGAGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR TCA 90 bp | GCCGAGAGTGGAACCACTGTCATTCATGCCCAGGCTGTCGGAGTCTaGGTTCTGTTTCTCTTGGGACAACCTCTTGTCCTGATCCGCCTT | + |
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Preference number: 1 (lower is better) Translates to: AESGTTVIHAQAVGV*VLFLLGQPLVLIRL Trigger: AAGGCGGATCAGGACAAGAGGTTGTCCCAAGAGAAACAGAACTCAGACTCCGACAGCCTGGGCATGAATGACAGTGGTTCCACTCTCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CCA 90 bp | TCTTCTTCCCTTTGCCATGTTCACAGGCTTCTCGACGGCCGAGAGTaGAACCACTGTCATTCATGCCCAGGCTGTCGGAGTCTGAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: SSSLCHVHRLLDGRE*NHCHSCPGCRSLSS Trigger: AGAACTCAGACTCCGACAGCCTGGGCATGAATGACAGTGGTTCCACTCTCGGCCGTCGAGAAGCCTGTGAACATGGCAAAGGGAAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CCA 90 bp | TTACCAGCACATTCAGGTAGCCACAGCATGGAACCTCGTCCTCACTaGAGAATGTCTGCAGGTCCTCGGACAGCGCCTTCTTCTTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: LPAHSGSHSMEPRPH*RMSAGPRTAPSSWR Trigger: TCTCCAAGAAGAAGGCGCTGTCCGAGGACCTGCAGACATTCTCCAGTGAGGACGAGGTTCCATGCTGTGGCTACCTGAATGTGCTGGTAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR TCA 90 bp | TGTGCAGGTCTGTGCGGTCTTTGTGGAAATAGAGAGTGTTGCACCTaGGGCGACACCACCGTTCCTTCCAGCCTTGGTTTACCAGCACAT | + |
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Preference number: 1 (lower is better) Translates to: CAGLCGLCGNRECCT*GDTTVPSSLGLPAH Trigger: ATGTGCTGGTAAACCAAGGCTGGAAGGAACGGTGGTGTCGCCTCAGGTGCAACACTCTCTATTTCCACAAAGACCGCACAGACCTGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CCA 90 bp | AGAGATTGCTCTGGGGCATTGCTTTGGGGTTTATTTGTAGTGTCTTaGCTCTTGTTCTTGTTGCTCACGGACAGACCGAGGGCCGGACCC | + |
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Preference number: 1 (lower is better) Translates to: RDCSGALLWGLFVVS*LLFLLLTDRPRAGP Trigger: GGGTCCGGCCCTCGGTCTGTCCGTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCAAAGCAATGCCCCAGAGCAATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR GCA 90 bp | GGACTCCTCTTTCTCAGTTCAGAAACACAGTTGACAGGGAGAGATTaGTCTGGGGCATTGCTTTGGGGTTTATTTGTAGTGTCTTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: GLLFLSSETQLTGRD*SGALLWGLFVVSWL Trigger: GAGCCAAGACACTACAAATAAACCCCAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGAACTGAGAAAGAGGAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR TCA 90 bp | TGCCAGCTGATCAGCCCTCTTTACCCTCTGAATTCTCAGACAATCTaGTTTAAAGATGCTCAAACATGGAAGGTTCTAGCAGCTGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: CQLISPLYPLNSQTI*FKDAQTWKVLAAAW Trigger: CCAGGCAGCTGCTAGAACCTTCCATGTTTGAGCATCTTTAAATCAGATTGTCTGAGAATTCAGAGGGTAAAGAGGGCTGATCAGCTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| 3UTR CCA 90 bp | TCAGAAACACAGTTGACAGGGAGAGATTGCTCTGGGGCATTGCTTTaGGGTTTATTTGTAGTGTCTTGGCTCTTGTTCTTGTTGCTCACG | + |
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Preference number: 1 (lower is better) Translates to: SETQLTGRDCSGALL*GLFVVSWLLFLLLT Trigger: CGTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR GCA 90 bp | GCCGGACCCCCGGCCAGGGACTGCTGCAAGCGCTCCTTCACAGCTACCAGCTTGCGCTTGACTTTGACCTaGGGGTCCGCACGGTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: AGPPARDCCKRSFTATSLRLTLT*GSARWD Trigger: GTCCCACCGTGCGGACCCGCAGGTCAAAGTCAAGCG...CAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCCGGGGGTCCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR GCA 90 bp | GGCACTGGAGGCGTGGCGCTTGACTTTGACCTGCGGGTCCGCACGGTGGGACTTAACCACTGTCATTCATaGCCAGGCTGTCGGAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: GTGGVALDFDLRVRTVGLNHCHS*PGCRSL Trigger: CAGACTCCGACAGCCTGGGCATGAATGACAGTGGTT...AAGTCCCACCGTGCGGACCCGCAGGTCAAAGTCAAGCGCCACGCCTCCAGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CAA 90 bp | TCGGACAGCGCCTTCTTCTTGGAGAAACTGATGATGCGCGTGATCTaGCGGCCGGCAGCCCTGCTCATGGAGCCCTTAAGCTCAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SDSAFFLEKLMMRVI*RPAALLMEPLSSAR Trigger: CCTGGCTGAGCTTAAGGGCTCCATGAGCAGGGCTGCCGGCCGCAAGATCACGCGCATCATCAGTTTCTCCAAGAAGAAGGCGCTGTCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CAA 90 bp | ATGTCCTCTGAGCAGCTTGCCTCCAGGATGGCCACCTCCTGTCGATaGCGCAGGATCCTGAAGGCAAAGGGGTGCCTGGGTCCAAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: MSSEQLASRMATSCR*RRILKAKGCLGPKP Trigger: AGGCTTTGGACCCAGGCACCCCTTTGCCTTCAGGATCCTGCGCAATCGACAGGAGGTGGCCATCCTGGAGGCAAGCTGCTCAGAGGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAACCTCATCGTAGATGCGGGGCTCAGGCCACTGATCCTGGCAGGACTGTGGCAGTGCCTCTGGGGTaGCTTTGGAGCCCATCTCCA | + |
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Preference number: 2 (lower is better) Translates to: KEPHRRCGAQATDPGRTVAVPLG*LWSPSP Trigger: TGGAGATGGGCTCCAAAGTCACCCCAGAGGCACTGC...CACAGTCCTGCCAGGATCAGTGGCCTGAGCCCCGCATCTACGATGAGGTTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACTGGAGGCGTGGCGCTTGACTTTGACCTGCGGGTCCGCACGGTGGGACTTCGTTCCTTCCAGCCTTaGTTTACCAGCACATTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GTGGVALDFDLRVRTVGLRSFQP*FTSTFR Trigger: CCTGAATGTGCTGGTAAACCAAGGCTGGAAGGAACG...AAGTCCCACCGTGCGGACCCGCAGGTCAAAGTCAAGCGCCACGCCTCCAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR CCA 90 bp | GCCGGACCCCCGGCCAGGGACTGCTGCAAGCGCTCCTTCACAGCTACCAGCTTGCTGGGTTGTTCCGAATaGCTTCCTTCAGCTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: AGPPARDCCKRSFTATSLLGCSE*LPSALS Trigger: AGAAAGAGCTGAAGGAAGCCATTCGGAACAACCCAG...CAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCCGGGGGTCCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CAA 90 bp | TCCTCACTGGAGAATGTCTGCAGGTCCTCGGACAGCGCCTTCTTCTaGGAGAAACTGATGATGCGCGTGATCTTGCGGCCGGCAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: SSLENVCRSSDSAFF*EKLMMRVILRPAAL Trigger: CAGGGCTGCCGGCCGCAAGATCACGCGCATCATCAGTTTCTCCAAGAAGAAGGCGCTGTCCGAGGACCTGCAGACATTCTCCAGTGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCTGGGGCTCCTCATCCTGCACCTTTTCATAAGGAACCTCATCGTAGATGCGCCGCCTTGCATAGGATaGCTGGGGATCTGGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: ALGLLILHLFIRNLIVDAPPCIG*LGIWGP Trigger: AGGTCCCCAGATCCCCAGTCATCCTATGCAAGGCGG...CGCATCTACGATGAGGTTCCTTATGAAAAGGTGCAGGATGAGGAGCCCCAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTAAGTTGCGGGTCCGCACGGTaGGACTTCTCACTGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LRPESFNHSPRSFSVTLSCGSAR*DFSLQE Trigger: CTCCTGCAGTGAGAAGTCCCACCGTGCGGACCCGCA...ACTTAATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTAAGTGATTGCGCAGGATCCTaGAGGCAAAGGGGTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LRPESFNHSPRSFSVTLSDCAGS*RQRGAW Trigger: CCAGGCACCCCTTTGCCTTCAGGATCCTGCGCAATC...ACTTAATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CAA 90 bp | ATAGAGAGTGTTGCACCTGAGGCGACACCACCGTTCCTTCCAGCCTaGGTTTACCAGCACATTCAGGTAGCCACAGCATGGAACCTCGTC | + |
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Preference number: 2 (lower is better) Translates to: IESVAPEATPPFLPA*VYQHIQVATAWNLV Trigger: GACGAGGTTCCATGCTGTGGCTACCTGAATGTGCTGGTAAACCAAGGCTGGAAGGAACGGTGGTGTCGCCTCAGGTGCAACACTCTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCCTTTGCCATGTTCACAGGCTTCTCGACGGCCGAGAGTGGAACCACTGTCAGGCTGTCGGAGTCTaGGTTCTGTTTCTCTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: SSLCHVHRLLDGREWNHCQAVGV*VLFLLG Trigger: TCCCAAGAGAAACAGAACTCAGACTCCGACAGCCTG...ACAGTGGTTCCACTCTCGGCCGTCGAGAAGCCTGTGAACATGGCAAAGGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCTTTCTCAGTTCAGAAACACAGTTGACAGGGAGAGATTGCTCTGGGGCACTGAAGGCAAAGGGGTaGCTGGGTCCAAAGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LLFLSSETQLTGRDCSGALKAKG*LGPKPG Trigger: CCCAGGCTTTGGACCCAGGCACCCCTTTGCCTTCAG...TGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGAACTGAGAAAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCTTCAGCTCTTTCTTCTCCTGTCGCAAGGCCGTCAGTTCTGTCCGAATCGCTATGGAATTCACGTaGGTGTGCAGGTCTGTGCGG | + |
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Preference number: 2 (lower is better) Translates to: ASFSSFFSCRKAVSSVRIAMEFT*VCRSVR Trigger: CCGCACAGACCTGCACACCCACGTGAATTCCATAGC...GATTCGGACAGAACTGACGGCCTTGCGACAGGAGAAGAAAGAGCTGAAGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTATTGAGCTTCCAGAGTaGCCACGGCCTCTTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LPQARELQPQSQELQCHIIELPE*PRPLPR Trigger: CCTTGGAAGAGGCCGTGGCCACTCTGGAAGCTCAAT...AATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CAA 90 bp | GAGAGATTGCTCTGGGGCATTGCTTTGGGGTTTATTTGTAGTGTCTaGGCTCTTGTTCTTGTTGCTCACGGACAGACCGAGGGCCGGACC | + |
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Preference number: 2 (lower is better) Translates to: ERLLWGIALGFICSV*ALVLVAHGQTEGRT Trigger: GGTCCGGCCCTCGGTCTGTCCGTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCAAAGCAATGCCCCAGAGCAATCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTGAACCTCGTCCTCACTaGAGAATGTCTGCAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LPQARELQPQSQELQCHIEPRPH*RMSAGP Trigger: AGGACCTGCAGACATTCTCCAGTGAGGACGAGGTTC...AATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR TCA 90 bp | TACAACACTAGCAGCACTTCAACACTGGCTTCCTTTGCTCTAAGGATGGGACTGGACAACCTCTTGTCCTaGTCCGCCTTGCATAGGATG | + |
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Preference number: 2 (lower is better) Translates to: YNTSSTSTLASFALRMGLDNLLS*SALHRM Trigger: CATCCTATGCAAGGCGGATCAGGACAAGAGGTTGTC...CAGTCCCATCCTTAGAGCAAAGGAAGCCAGTGTTGAAGTGCTGCTAGTGTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTTGTTCTTCTTCCCTTTaGCATGTTCACAGGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LPQARELQPQSQELQCHICSSSL*HVHRLL Trigger: GAGAAGCCTGTGAACATGGCAAAGGGAAGAAGAACA...AATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGGTTTATTTGTAGTGTCTTGGCTCTTGTTCTTGTTGCTCACGGACAGACCCAGGTAGCCACAGCATaGAACCTCGTCCTCACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LGFICSVLALVLVAHGQTQVATA*NLVLTG Trigger: TCCAGTGAGGACGAGGTTCCATGCTGTGGCTACCTG...GGTCTGTCCGTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGGTTTATTTGTAGTGTCTTGGCTCTTGTTCTTGTTGCTCACGGACAGACCTTAGAACGGACAAGCTaGTGCTGCTTCAGGGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LGFICSVLALVLVAHGQTLERTS*CCFRVD Trigger: GTCCACCCTGAAGCAGCATCAGCTTGTCCGTTCTAA...GGTCTGTCCGTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTTCTCAGTTCAGAAACACAGTTGACAGGGAGAGATTGCTCTGGGGCATTGAGCTGGTCTTTTGGGTaGCCCAGTCTTTTCCTGATG | + |
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Preference number: 2 (lower is better) Translates to: LFLSSETQLTGRDCSGALSWSFG*PSLFLM Trigger: CATCAGGAAAAGACTGGGGCACCCAAAAGACCAGCT...CAATGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGAACTGAGAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR CCA 90 bp | CACGCCTCCCTTCCCACAATCCTTAAAACCATGCGGACAGTCAAGCTGGTCTTTCTTTTCCTGATGTCTTaGCGAAGAAAGCATTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: HASLPTILKTMRTVKLVFLFLMS*RRKHSL Trigger: GAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAG...AAAGACCAGCTTGACTGTCCGCATGGTTTTAAGGATTGTGGGAAGGGAGGCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCAGCTTGCCTCCAGGATaGCCACCTCCTGTCGATTGC | + |
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Preference number: 2 (lower is better) Translates to: IEISSVWKRLSTLVVDMSSLPPG*PPPVDC Trigger: GCAATCGACAGGAGGTGGCCATCCTGGAGGCAAGCT...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR TCA 90 bp | TGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAGACAGTCATTGAATGGCATAGAGAGTGTTGCACCTaGGGCGACACCACCGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: CMLKQTSKPSVETVIEWHRECCT*GDTTVP Trigger: AGGAACGGTGGTGTCGCCTCAGGTGCAACACTCTCT...ATGCCATTCAATGACTGTCTCAACACTGGGCTTTGAAGTCTGTTTTAACATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGGTGGGACTTCTCACTaGAGGAGGAGGCGTGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVGGTSH*RRRRGA Trigger: AGCGCCACGCCTCCTCCTGCAGTGAGAAGTCCCACC...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CAA 90 bp | TTCAGAAACACAGTTGACAGGGAGAGATTGCTCTGGGGCATTGCTTaGGGGTTTATTTGTAGTGTCTTGGCTCTTGTTCTTGTTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: FRNTVDRERLLWGIA*GFICSVLALVLVAH Trigger: GTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| 3UTR CAA 90 bp | CTCAGTTCAGAAACACAGTTGACAGGGAGAGATTGCTCTGGGGCATaGCTTTGGGGTTTATTTGTAGTGTCTTGGCTCTTGTTCTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LSSETQLTGRDCSGA*LWGLFVVSWLLFLL Trigger: CAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGAACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR CCA 90 bp | TACGTGCGTTCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTAGGCAAAGGGGTGCCTaGGTCCAAAGCCTGGGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: YVRSLHQKAKITNKTFTTRQRGA*VQSLGL Trigger: TAGCCCCAGGCTTTGGACCCAGGCACCCCTTTGCCT...AGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGAACGCACGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR CAA 90 bp | GGACTGAGAGGCCAAGGAAAGGATGGAATGGCTTACGTGCGTTCATaGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GLRGQGKDGMAYVRS*HQKAKITNKTFTTV Trigger: CACAGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGAACGCACGTAAGCCATTCCATCCTTTCCTTGGCCTCTCAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTAGTTGCGCCCAGCACTaGCGATGCTGGTTAAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVSCAQH*RCWLRS Trigger: AGACCTTAACCAGCATCGTCAGTGCTGGGCGCAACT...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTGTGGACGATTTAGAACGGACAAGCTaGTGCTGCTTCAGGGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SLHQKAKITNKTFTTVDDLERTS*CCFRVD Trigger: GTCCACCCTGAAGCAGCATCAGCTTGTCCGTTCTAA...ATCGTCCACAGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCAAAGATGCTCAAACATaGAAGGTTCTAGCAGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: IEISSVWKRLSTLVVDMSKDAQT*KVLAAA Trigger: GGCAGCTGCTAGAACCTTCCATGTTTGAGCATCTTT...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR-3UTR CCA 90 bp | TACGTGCGTTCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTATAGTGCAGTGCCTCTaGGGTGACTTTGGAGCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: YVRSLHQKAKITNKTFTTIVQCL*GDFGAH Trigger: ATGGGCTCCAAAGTCACCCCAGAGGCACTGCACTAT...AGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGAACGCACGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR GCA 90 bp | TCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTGTGGACGATAGCTGGTCTTTTGGGTaGCCCAGTCTTTTCCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: SLHQKAKITNKTFTTVDDSWSFG*PSLFLM Trigger: CATCAGGAAAAGACTGGGGCACCCAAAAGACCAGCT...ATCGTCCACAGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAGACAGTCATTGAATGGCATCTTTTCCTGATGTCTTaGCGAAGAAAGCATTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: CMLKQTSKPSVETVIEWHLFLMS*RRKHSL Trigger: GAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAG...ATGCCATTCAATGACTGTCTCAACACTGGGCTTTGAAGTCTGTTTTAACATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCCTAAGTGTGATCAGGTaGTGGAGTGGTTTTCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: IEISSVWKRLSTLVVDMSLSVIR*WSGFLF Trigger: AAAAAGAAAACCACTCCATCACCTGATCACACTTAG...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR-3UTR GCA 90 bp | TCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAGGACTCCACCTTCCAATaGATACAACAGTGTCAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SSLLEMCMLKQTSKPSVEDSTFQ*IQQCQH Trigger: ATGCTGACACTGTTGTATGCATTGGAAGGTGGAGTC...CTCAACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR-3UTR TCA 90 bp | TACGTGCGTTCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTCAGGCAGGAATACATTaGTTTTCCAGTCCATTAACC | + |
|
Preference number: 2 (lower is better) Translates to: YVRSLHQKAKITNKTFTTQAGIH*FSSPLT Trigger: GGTTAATGGACTGGAAAATCAATGTATTCCTGCCTG...AGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGAACGCACGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR GCA 72 bp | GACAGACCGAGGGCCGGACCCCCGGCCAGGGACTGCTaGAAGCGCTCCTTCACAGCTACCAGCTTGAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: DRPRAGPPARDC*KRSFTATSLSS Trigger: GGAGCTCAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCCGGGGGTCCGGCCCTCGGTCTGTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR GCA 72 bp | ACGGACAGACCGAGGGCCGGACCCCCGGCCAGGGACTaGTGCAAGCGCTCCTTCACAGCTACCAGCTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TDRPRAGPPARD*CKRSFTATSLS Trigger: GCTCAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCCGGGGGTCCGGCCCTCGGTCTGTCCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR GCA 72 bp | CCAGGTACCTTCGGGCATCCTCCTCCGCCCGGTTCTTaGCGTACTTGTATTGATTGGCACTGGAGGCGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PGTFGHPPPPGS*RTCIDWHWRRG Trigger: GCCACGCCTCCAGTGCCAATCAATACAAGTACGGCAAGAACCGGGCGGAGGAGGATGCCCGAAGGTACCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR TCA 72 bp | GGGACAACCTCTTGTCCTGATCCGCCTTGCATAGGATaGCTGGGGATCTGGGGACCTCCAAGCCCTCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GTTSCPDPPCIG*LGIWGPPSPLL Trigger: GAGCAGAGGGCTTGGAGGTCCCCAGATCCCCAGTCATCCTATGCAAGGCGGATCAGGACAAGAGGTTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR TCA 72 bp | GGGACTGCTGCAAGCGCTCCTTCACAGCTACCAGCTTaGGCTCCAGGTCGATCCTCTGCTCTTCCTTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GTAASAPSQLPA*APGRSSALPWH Trigger: GTGCCAAGGAAGAGCAGAGGATCGACCTGGAGCTCAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGCTGGGGCTCCTCATCCTGCACCTTTTCATAAGGAACCTCATCGTAGATGCGGCCACCTCCTGTCGATaGCGCAGGATCCTGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ALGLLILHLFIRNLIVDAATSCR*RRILKA Trigger: TGCCTTCAGGATCCTGCGCAATCGACAGGAGGTGGC...CGCATCTACGATGAGGTTCCTTATGAAAAGGTGCAGGATGAGGAGCCCCAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCTTCCACGCCTCCCTTCCCACAATCCTTAAAACCATGCGGACAGTCAAGCTGGCCTCTGGGGTGACTTaGGAGCCCATCTCCACTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RFHASLPTILKTMRTVKLASGVT*EPISTS Trigger: GCTAGTGGAGATGGGCTCCAAAGTCACCCCAGAGGC...CAGCTTGACTGTCCGCATGGTTTTAAGGATTGTGGGAAGGGAGGCGTGGAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR CCA 72 bp | CATTCAGGTAGCCACAGCATGGAACCTCGTCCTCACTaGAGAATGTCTGCAGGTCCTCGGACAGCGCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HSGSHSMEPRPH*RMSAGPRTAPS Trigger: AGAAGGCGCTGTCCGAGGACCTGCAGACATTCTCCAGTGAGGACGAGGTTCCATGCTGTGGCTACCTGAATG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR TCA 72 bp | AGGACTGTGCATACAGGAAGGAGTTGCGCCCAGCACTaGCGATGCTGGTTAAGGTCTCCACGTCGACGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RTVHTGRSCAQH*RCWLRSPRRRS Trigger: ACTACGTCGACGTGGAGACCTTAACCAGCATCGTCAGTGCTGGGCGCAACTCCTTCCTGTATGCACAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR GCA 72 bp | CCACAGCATGGAACCTCGTCCTCACTGGAGAATGTCTaGAGGTCCTCGGACAGCGCCTTCTTCTTGGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PQHGTSSSLENV*RSSDSAFFLEK Trigger: TTTCTCCAAGAAGAAGGCGCTGTCCGAGGACCTGCAGACATTCTCCAGTGAGGACGAGGTTCCATGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR GCA 72 bp | CATCCTGCACCTTTTCATAAGGAACCTCATCGTAGATaGGGGGCTCAGGCCACTGATCCTGGCAGGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HPAPFHKEPHRR*GAQATDPGRTV Trigger: CACAGTCCTGCCAGGATCAGTGGCCTGAGCCCCGCATCTACGATGAGGTTCCTTATGAAAAGGTGCAGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR CCA 72 bp | GGCCACGGCCTCTTCCAAGGCCTTCGACTTTGCTCCTaGGTTGTTCCGAATGGCTTCCTTCAGCTCTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GHGLFQGLRLCS*VVPNGFLQLFL Trigger: AAGAAAGAGCTGAAGGAAGCCATTCGGAACAACCCAGGAGCAAAGTCGAAGGCCTTGGAAGAGGCCGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR GCA 72 bp | CTTCTCGACGGCCGAGAGTGGAACCACTGTCATTCATaGCCAGGCTGTCGGAGTCTGAGTTCTGTTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLDGREWNHCHS*PGCRSLSSVSL Trigger: AAGAGAAACAGAACTCAGACTCCGACAGCCTGGGCATGAATGACAGTGGTTCCACTCTCGGCCGTCGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR CCA 72 bp | CCAAGGCCTTCGACTTTGCTCCTGGGTTGTTCCGAATaGCTTCCTTCAGCTCTTTCTTCTCCTGTCGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PRPSTLLLGCSE*LPSALSSPVAR Trigger: CCTTGCGACAGGAGAAGAAAGAGCTGAAGGAAGCCATTCGGAACAACCCAGGAGCAAAGTCGAAGGCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGAGCTCCAGGTCGATCCTCTGCTCTTCCTTGGCACGGCATTGAGCTTCCAGCTGTTCTTCTTCCCTTaGCCATGTTCACAGGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LELQVDPLLFLGTALSFQLFFFP*PCSQAS Trigger: AGAAGCCTGTGAACATGGCAAAGGGAAGAAGAACAG...CTGGAAGCTCAATGCCGTGCCAAGGAAGAGCAGAGGATCGACCTGGAGCTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCTTCAGCTCTTTCTTCTCCTGTCGCAAGGCCGTCAGTTCTGTCCGAATCGACAGCGCCTTCTTCTaGGAGAAACTGATGATGCGC | + |
|
Preference number: 3 (lower is better) Translates to: ASFSSFFSCRKAVSSVRIDSAFF*EKLMMR Trigger: GCGCATCATCAGTTTCTCCAAGAAGAAGGCGCTGTC...GATTCGGACAGAACTGACGGCCTTGCGACAGGAGAAGAAAGAGCTGAAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR TCA 72 bp | GGCGAAGAAAGCATTCCCTCCTTAGAACGGACAAGCTaGTGCTGCTTCAGGGTGGACTTCTCACCCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GEESIPSLERTS*CCFRVDFSPSL Trigger: TAGAGAGGGTGAGAAGTCCACCCTGAAGCAGCATCAGCTTGTCCGTTCTAAGGAGGGAATGCTTTCTTCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR CCA 72 bp | CCCATTCCTTGGCCTTCTGTAGCACCCTCCCTTGGTTaGAGGTCACAATGGATGGACTCCTCTTTCTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PIPWPSVAPSLG*RSQWMDSSFSV Trigger: AACTGAGAAAGAGGAGTCCATCCATTGTGACCTCCAACCAAGGGAGGGTGCTACAGAAGGCCAAGGAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTAAGTCCGTTCCTTCCAGCCTaGGTTTACCAGCACATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRPESFNHSPRSFSVTLSPFLPA*VYQHIQ Trigger: CTGAATGTGCTGGTAAACCAAGGCTGGAAGGAACGG...ACTTAATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTAAGTTCTTTTCCTGATGTCTaGGCGAAGAAAGCATTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRPESFNHSPRSFSVTLSSFPDV*AKKAFP Trigger: AGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGA...ACTTAATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTGTGTTGAGACAGTCATaGAATGGCATAGAAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPQARELQPQSQELQCHIVLRQS*NGIEKR Trigger: CCTCTTTTCTATGCCATTCAATGACTGTCTCAACAC...AATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR CCA 72 bp | CAGTTGACAGGGAGAGATTGCTCTGGGGCATTGCTTTaGGGTTTATTTGTAGTGTCTTGGCTCTTGTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QLTGRDCSGALL*GLFVVSWLLFL Trigger: CAAGAACAAGAGCCAAGACACTACAAATAAACCCCAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR CAA 90 bp | TACGTGCGTTCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTTCCCAGCTCCACCCTTaGTCTAGCCAGAAGGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: YVRSLHQKAKITNKTFTTSQLHP*SSQKDA Trigger: AGCGTCCTTCTGGCTAGACAAAGGGTGGAGCTGGGA...AGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGAACGCACGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR GCA 72 bp | TTTCTCAGTTCAGAAACACAGTTGACAGGGAGAGATTaGTCTGGGGCATTGCTTTGGGGTTTATTTGTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FLSSETQLTGRD*SGALLWGLFVV Trigger: CACTACAAATAAACCCCAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGAACTGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTGTGGACGATTCTTTTCCTGATGTCTaGGCGAAGAAAGCATTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SLHQKAKITNKTFTTVDDSFPDV*AKKAFP Trigger: AGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGA...ATCGTCCACAGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCGACAGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCGCAGGCAGGAATACATaGATTTTCCAGTCCATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: VRQFIFIGDVYVKTDFKAAGRNT*IFQSIN Trigger: GTTAATGGACTGGAAAATCAATGTATTCCTGCCTGC...GGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACTGTCGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| CDS-3UTR CCA 90 bp | GCCGGACCCCCGGCCAGGGACTGCTGCAAGCGCTCCTTCACAGCTACCAGCTTGAGAGACTTCCTTTGCTaGGAGGGGCTGCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGPPARDCCKRSFTATSLRDFLC*EGLQAL Trigger: CAGAGCCTGCAGCCCCTCCCAGCAAAGGAAGTCTCT...CAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCCGGGGGTCCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTTCAGCTCTTTCTTCTCCTGTCGCAAGGCCGTCAGTTCTGTCCGAATCACCTCTGTGGCCCCCTaGGAGAAGCGCAGCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASFSSFFSCRKAVSSVRITSVAP*EKRSSC Trigger: GCACGAGCTGCGCTTCTCCCAGGGGGCCACAGAGGT...GATTCGGACAGAACTGACGGCCTTGCGACAGGAGAAGAAAGAGCTGAAGGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR TCA 90 bp | ACAACTGTGGACGATTCTGTCTCCGGACACTCCCAGCTCCACCCTTTGTCTAGCCCGCCTTGCATAGGATaGCTGGGGATCTGGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TTVDDSVSGHSQLHPLSSPPCIG*LGIWGP Trigger: AGGTCCCCAGATCCCCAGTCATCCTATGCAAGGCGG...GCTAGACAAAGGGTGGAGCTGGGAGTGTCCGGAGACAGAATCGTCCACAGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | AAGGAACCTCATCGTAGATGCGGGGCTCAGGCCACTGATCCTGGCAGGACTGTGAGCTCGTGCCGCTTGTaGTTCTCAGAGATGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEPHRRCGAQATDPGRTVSSCRL*FSEMGS Trigger: AGAGCCCATCTCTGAGAAGCACAAGCGGCACGAGCT...CACAGTCCTGCCAGGATCAGTGGCCTGAGCCCCGCATCTACGATGAGGTTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR CCA 90 bp | CGCTTCCACGCCTCCCTTCCCACAATCCTTAAAACCATGCGGACAGTCAAGCTGGAGACTCCACAAAGCTaGGCCCCGAGTGCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFHASLPTILKTMRTVKLETPQS*APSAGL Trigger: CAGACCTGCACTCGGGGCCCAGCTTTGTGGAGTCTC...CAGCTTGACTGTCCGCATGGTTTTAAGGATTGTGGGAAGGGAGGCGTGGAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTTGCGGGTCCGCACGGTaGGACTTCTCACTGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPQARELQPQSQELQCHICGSAR*DFSLQE Trigger: CTCCTGCAGTGAGAAGTCCCACCGTGCGGACCCGCA...AATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| 3UTR CAA 72 bp | GCCTTCTTCTTGGAGAAACTGATGATGCGCGTGATCTaGCGGCCGGCAGCCCTGCTCATGGAGCCCTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFFLEKLMMRVI*RPAALLMEPLS Trigger: GCTTAAGGGCTCCATGAGCAGGGCTGCCGGCCGCAAGATCACGCGCATCATCAGTTTCTCCAAGAAGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR CAA 72 bp | AGGGACTGCTGCAAGCGCTCCTTCACAGCTACCAGCTaGAGCTCCAGGTCGATCCTCTGCTCTTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDCCKRSFTATS*SSRSILCSSLA Trigger: TGCCAAGGAAGAGCAGAGGATCGACCTGGAGCTCAAGCTGGTAGCTGTGAAGGAGCGCTTGCAGCAGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR CAA 72 bp | TGGGGTTTATTTGTAGTGTCTTGGCTCTTGTTCTTGTaGCTCACGGACAGACCGAGGGCCGGACCCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WGLFVVSWLLFL*LTDRPRAGPPA Trigger: GGCCGGGGGTCCGGCCCTCGGTCTGTCCGTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR GCA 90 bp | ACAACTGTGGACGATTCTGTCTCCGGACACTCCCAGCTCCACCCTTTGTCTAGCAAGCTGGGCCCCGAGTaGAGGTCTGCAGTGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TTVDDSVSGHSQLHPLSSKLGPE*RSAVFT Trigger: TGTGAACACTGCAGACCTGCACTCGGGGCCCAGCTT...GCTAGACAAAGGGTGGAGCTGGGAGTGTCCGGAGACAGAATCGTCCACAGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTAGGCAAAGGGGTGCCTaGGTCCAAAGCCTGGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPQARELQPQSQELQCHIRQRGA*VQSLGL Trigger: TAGCCCCAGGCTTTGGACCCAGGCACCCCTTTGCCT...AATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| 3UTR CAA 72 bp | GAGAATGTCTGCAGGTCCTCGGACAGCGCCTTCTTCTaGGAGAAACTGATGATGCGCGTGATCTTGCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ENVCRSSDSAFF*EKLMMRVILRP Trigger: CGGCCGCAAGATCACGCGCATCATCAGTTTCTCCAAGAAGAAGGCGCTGTCCGAGGACCTGCAGACATTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| 3UTR CAA 72 bp | GTTGCACCTGAGGCGACACCACCGTTCCTTCCAGCCTaGGTTTACCAGCACATTCAGGTAGCCACAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VAPEATPPFLPA*VYQHIQVATAW Trigger: CCATGCTGTGGCTACCTGAATGTGCTGGTAAACCAAGGCTGGAAGGAACGGTGGTGTCGCCTCAGGTGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR TCA 90 bp | CGCTTCCACGCCTCCCTTCCCACAATCCTTAAAACCATGCGGACAGTCAAGCTGAGTTGCGCCCAGCACTaGCGATGCTGGTTAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFHASLPTILKTMRTVKLSCAQH*RCWLRS Trigger: AGACCTTAACCAGCATCGTCAGTGCTGGGCGCAACT...CAGCTTGACTGTCCGCATGGTTTTAAGGATTGTGGGAAGGGAGGCGTGGAAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | CACGCCTCCCTTCCCACAATCCTTAAAACCATGCGGACAGTCAAGCTGGTCTTTGCCTGCTCCCTGCTCTaGAGAGCCAGCACTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: HASLPTILKTMRTVKLVFACSLL*RASTNT Trigger: GGTGTTAGTGCTGGCTCTGCAGAGCAGGGAGCAGGC...AAAGACCAGCTTGACTGTCCGCATGGTTTTAAGGATTGTGGGAAGGGAGGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCCAGGCTGTCGGAGTCTGAGTTCTGTTTCTCTTGGGACAACCTCTTGTCCGAGAAGCGCAGCTCGTaGCGCTTGTGCTTCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MPRLSESEFCFSWDNLLSEKRSS*RLCFSE Trigger: CTCTGAGAAGCACAAGCGGCACGAGCTGCGCTTCTC...GGACAAGAGGTTGTCCCAAGAGAAACAGAACTCAGACTCCGACAGCCTGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTAAGTGGCTGGCTCCTTTGCTaGGTTCCCCATCGTCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: LRPESFNHSPRSFSVTLSGWLLC*VPHRPT Trigger: TGTCGGACGATGGGGAACCCAGCAAAGGAGCCAGCC...ACTTAATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| 3UTR CAA 72 bp | CTTTGGGGTTTATTTGTAGTGTCTTGGCTCTTGTTCTaGTTGCTCACGGACAGACCGAGGGCCGGACCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LWGLFVVSWLLF*LLTDRPRAGPP Trigger: CGGGGGTCCGGCCCTCGGTCTGTCCGTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTAAGTCTACCTCGCAGCCCCTaGGGGCTATGGAATTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LRPESFNHSPRSFSVTLSLPRSP*GLWNSR Trigger: ACGTGAATTCCATAGCCCTCAGGGGCTGCGAGGTAG...ACTTAATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCTCTTTCTTCTCCTGTCGCAAGGCCGTCAGTTCTGTCCGAATCGTTTCTCAGAGATGGGCTCTTaGTTGGCTCAGGGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQLFLLLSQGRQFCPNRFSEMGS*LAQGWL Trigger: GAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGA...GAAACGATTCGGACAGAACTGACGGCCTTGCGACAGGAGAAGAAAGAGCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR CCA 90 bp | TACAACACTAGCAGCACTTCAACACTGGCTTCCTTTGCTCTAAGGATGGGACTGCGCCAGCCTCAGGTGTaGCTGTCGGTCCTTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YNTSSTSTLASFALRMGLRQPQV*LSVLGA Trigger: AGCTCCAAGGACCGACAGCCACACCTGAGGCTGGCG...CAGTCCCATCCTTAGAGCAAAGGAAGCCAGTGTTGAAGTGCTGCTAGTGTTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | CGCTTCCACGCCTCCCTTCCCACAATCCTTAAAACCATGCGGACAGTCAAGCTGATAGTGCAGTGCCTCTaGGGTGACTTTGGAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFHASLPTILKTMRTVKLIVQCL*GDFGAH Trigger: ATGGGCTCCAAAGTCACCCCAGAGGCACTGCACTAT...CAGCTTGACTGTCCGCATGGTTTTAAGGATTGTGGGAAGGGAGGCGTGGAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| 3UTR CAA 72 bp | ACGGCCTCTTCCAAGGCCTTCGACTTTGCTCCTGGGTaGTTCCGAATGGCTTCCTTCAGCTCTTTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TASSKAFDFAPG*FRMASFSSFFS Trigger: GGAGAAGAAAGAGCTGAAGGAAGCCATTCGGAACAACCCAGGAGCAAAGTCGAAGGCCTTGGAAGAGGCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCCAGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGAGAGAGTGTTGCACCTaGGGCGACACCACCGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPSLFLMSWRRKHSLLRTRECCT*GDTTVP Trigger: AGGAACGGTGGTGTCGCCTCAGGTGCAACACTCTCT...CGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTAAGTGAAAGAGACTTCCTTTaGTGGGAGGGGCTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRPESFNHSPRSFSVTLSERDFL*WEGLQA Trigger: AGCCTGCAGCCCCTCCCAGCAAAGGAAGTCTCTTTC...ACTTAATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTCCCCGAGTGCAGGTCTaGAGTGTTCACATACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPQARELQPQSQELQCHIPRVQV*SVHIQE Trigger: TTCCTGTATGTGAACACTGCAGACCTGCACTCGGGG...AATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCCAGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGAGCTGCTTGGCCCACTaGCCGAAGCGCTTTTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: CPSLFLMSWRRKHSLLRTSCLAH*PKRFFR Trigger: TCGGAAAAAGCGCTTCGGGCAGTGGGCCAAGCAGCT...CGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACTGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGGACAAGCCTCGGCCTGCTCCCTaGTCTGCAGAGCCAGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SLFLMSWRRKHSLLRTDKPRPAP*SAEPAL Trigger: TAGTGCTGGCTCTGCAGAGCAGGGAGCAGGCCGAGG...CTTGTCCGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGGACAAGGGTGGGACTTCTCACTaGAGGAGGAGGCGTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLFLMSWRRKHSLLRTDKGGTSH*RRRRGA Trigger: AGCGCCACGCCTCCTCCTGCAGTGAGAAGTCCCACC...CTTGTCCGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | TGCCCCAGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGTCAGAGATGGGCTCTTaGTTGGCTCAGGGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPSLFLMSWRRKHSLLRTSEMGS*LAQGWL Trigger: GAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGA...CGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCCACAATCCTTAAAACCATGCGGACAGTCAAGCTGGTCTTTTGGGTGCCCCCGAGTGCAGGTCTaGAGTGTTCACATACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFPQSLKPCGQSSWSFGCPRVQV*SVHIQE Trigger: TTCCTGTATGTGAACACTGCAGACCTGCACTCGGGG...GCACCCAAAAGACCAGCTTGACTGTCCGCATGGTTTTAAGGATTGTGGGAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| CDS-3UTR GCA 90 bp | TGCCCCAGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGGAACCTCATCGTAGATaGGGGGCTCAGGCCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CPSLFLMSWRRKHSLLRTEPHRR*GAQATD Trigger: ATCAGTGGCCTGAGCCCCGCATCTACGATGAGGTTC...CGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACTGGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTCCAGGGTTGCCTGTAATGGCCAACAGGAATCAGCCTGCCTAAGTGTGCTGGGTTGTTCCGAATaGCTTCCTTCAGCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSRVACNGQQESACLSVLGCSE*LPSALS Trigger: AGAAAGAGCTGAAGGAAGCCATTCGGAACAACCCAG...CACACTTAGGCAGGCTGATTCCTGTTGGCCATTACAGGCAACCCTGGACAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR TCA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCCGGGGCTCAGGCCACTaGTCCTGGCAGGACTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IEISSVWKRLSTLVVDMSRGSGH*SWQDCA Trigger: TGCACAGTCCTGCCAGGATCAGTGGCCTGAGCCCCG...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR GCA 90 bp | GGTCCTATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACCGCTTGACTTTGACCTaGGGGTCCGCACGGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPIEISSVWKRLSTLVVDRLTLT*GSARWD Trigger: GTCCCACCGTGCGGACCCGCAGGTCAAAGTCAAGCG...GTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTATAGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR GCA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCCCCCCGGCCAGGGACTaGTGCAAGCGCTCCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: IEISSVWKRLSTLVVDMSPPARD*CKRSFT Trigger: TGTGAAGGAGCGCTTGCAGCAGTCCCTGGCCGGGGG...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| 3UTR CAA 72 bp | GCATTGCTTTGGGGTTTATTTGTAGTGTCTTGGCTCTaGTTCTTGTTGCTCACGGACAGACCGAGGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLWGLFVVSWL*FLLLTDRPRAG Trigger: TCCGGCCCTCGGTCTGTCCGTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCAAAGCAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| CDS-3UTR CCA 90 bp | AGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGGACAAGAGATGGGCTCTTGGTTaGCTCAGGGCTGGCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLFLMSWRRKHSLLRTDKRWALG*LRAGSF Trigger: AAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCT...CTTGTCCGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| CDS-3UTR CCA 90 bp | TGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAGACAGTCATTGAATGGCATACCTCTGTGGCCCCCTaGGAGAAGCGCAGCTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CMLKQTSKPSVETVIEWHTSVAP*EKRSSC Trigger: GCACGAGCTGCGCTTCTCCCAGGGGGCCACAGAGGT...ATGCCATTCAATGACTGTCTCAACACTGGGCTTTGAAGTCTGTTTTAACATACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| CDS-3UTR CCA 90 bp | AGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGGACAAGCAGGTAGCCACAGCATaGAACCTCGTCCTCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLFLMSWRRKHSLLRTDKQVATA*NLVLTG Trigger: TCCAGTGAGGACGAGGTTCCATGCTGTGGCTACCTG...CTTGTCCGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| 3UTR CAA 72 bp | CTCTGGGGCATTGCTTTGGGGTTTATTTGTAGTGTCTaGGCTCTTGTTCTTGTTGCTCACGGACAGACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWGIALGFICSV*ALVLVAHGQTE Trigger: CTCGGTCTGTCCGTGAGCAACAAGAACAAGAGCCAAGACACTACAAATAAACCCCAAAGCAATGCCCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGGACAAGGACAACCTCTTGTCCTaGTCCGCCTTGCATAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLFLMSWRRKHSLLRTDKDNLLS*SALHRM Trigger: CATCCTATGCAAGGCGGATCAGGACAAGAGGTTGTC...CTTGTCCGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCCAGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGGTTCAGAAACACAGTTaGCAGGGAGAGATTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPSLFLMSWRRKHSLLRTVQKHS*QGEIAL Trigger: CAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGAAC...CGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACTGGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | AAGATAACTAATAAAACCTTTACAACTGTGGACGATTCTGTCTCCGGACACTCCAGCTCGTGCCGCTTGTaGCTGCTGTCCTTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KITNKTFTTVDDSVSGHSSSCRL*LLSLGT Trigger: TGTGCCCAAGGACAGCAGGCACAAGCGGCACGAGCT...GGAGTGTCCGGAGACAGAATCGTCCACAGTTGTAAAGGTTTTATTAGTTATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CCA 90 bp | AGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGGACAAGTCCTCTGCTCTTCCTTaGCACGGCATTGAGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLFLMSWRRKHSLLRTDKSSALP*HGIELP Trigger: TGGAAGCTCAATGCCGTGCCAAGGAAGAGCAGAGGA...CTTGTCCGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| 3UTR CAA 72 bp | ATGGATGGACTCCTCTTTCTCAGTTCAGAAACACAGTaGACAGGGAGAGATTGCTCTGGGGCATTGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MDGLLFLSSETQ*TGRDCSGALLW Trigger: CCAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGAACTGAGAAAGAGGAGTCCATCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR TCA 90 bp | GTTCGACAGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCGCGGCCCATGTCCTCTaGGCAGCTTGCCTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VRQFIFIGDVYVKTDFKAAAHVL*AACLQD Trigger: ATCCTGGAGGCAAGCTGCTCAGAGGACATGGGCCGC...GGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACTGTCGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCAGAGACTTCCTTTGCTaGGAGGGGCTGCAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IEISSVWKRLSTLVVDMSRDFLC*EGLQAL Trigger: CAGAGCCTGCAGCCCCTCCCAGCAAAGGAAGTCTCT...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| CDS-3UTR CCA 90 bp | TACAACACTAGCAGCACTTCAACACTGGCTTCCTTTGCTCTAAGGATGGGACTGGTGGCTGTCGGTCCTTaGAGCTTTTGTAACACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YNTSSTSTLASFALRMGLVAVGP*SFCNTV Trigger: TACTGTGTTACAAAAGCTCCAAGGACCGACAGCCAC...CAGTCCCATCCTTAGAGCAAAGGAAGCCAGTGTTGAAGTGCTGCTAGTGTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTTTTCCTGATGTCTTGGCGAAGAAAGCATTCCCTCCTTAGAACGGACAAGCGTTCCTTCCAGCCTTaGTTTACCAGCACATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFLMSWRRKHSLLRTDKRSFQP*FTSTFR Trigger: CCTGAATGTGCTGGTAAACCAAGGCTGGAAGGAACG...CTTGTCCGTTCTAAGGAGGGAATGCTTTCTTCGCCAAGACATCAGGAAAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | TACAACACTAGCAGCACTTCAACACTGGCTTCCTTTGCTCTAAGGATGGGACTGGGTTGGAGGTCACAATaGATGGACTCCTCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YNTSSTSTLASFALRMGLGWRSQ*MDSSFS Trigger: TGAGAAAGAGGAGTCCATCCATTGTGACCTCCAACC...CAGTCCCATCCTTAGAGCAAAGGAAGCCAGTGTTGAAGTGCTGCTAGTGTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR TCA 90 bp | GGTCCTATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACCAGGCTGTCGGAGTCTaGGTTCTGTTTCTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPIEISSVWKRLSTLVVDQAVGV*VLFLLG Trigger: TCCCAAGAGAAACAGAACTCAGACTCCGACAGCCTG...GTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTATAGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR TCA 90 bp | TCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAGGATTGCGCAGGATCCTaGAGGCAAAGGGGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLLEMCMLKQTSKPSVEDCAGS*RQRGAW Trigger: CCAGGCACCCCTTTGCCTTCAGGATCCTGCGCAATC...CTCAACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCGTCCACAATCGACTGTaGAGGGCTGCAGCCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IEISSVWKRLSTLVVDMSVHNRL*RAAAIV Trigger: CACAATGGCTGCAGCCCTGCACAGTCGATTGTGGAC...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | GTTCGACAGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCTGAAGGCAAAGGGGTaGCTGGGTCCAAAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRQFIFIGDVYVKTDFKALKAKG*LGPKPG Trigger: CCCAGGCTTTGGACCCAGGCACCCCTTTGCCTTCAG...GGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACTGTCGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTCCGGCCAGGGACTGCTaGAAGCGCTCCTTCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVPARDC*KRSFTA Trigger: AGCTGTGAAGGAGCGCTTGCAGCAGTCCCTGGCCGG...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR GCA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCGGCTCTTGTTCTTGTTaGTCACGGACAGACCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IEISSVWKRLSTLVVDMSGSCSC*SRTDRG Trigger: CCCTCGGTCTGTCCGTGAGCAACAAGAACAAGAGCC...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CCA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCGCTATGGAATTCACGTaGGTGTGCAGGTCTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IEISSVWKRLSTLVVDMSAMEFT*VCRSVR Trigger: CCGCACAGACCTGCACACCCACGTGAATTCCATAGC...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| 3UTR CAA 72 bp | GAAACACAGTTGACAGGGAGAGATTGCTCTGGGGCATaGCTTTGGGGTTTATTTGTAGTGTCTTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETQLTGRDCSGA*LWGLFVVSWLL Trigger: CAAGAGCCAAGACACTACAAATAAACCCCAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| CDS-3UTR TCA 90 bp | TACGTGCGTTCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTGCAGTGCCTCTGGGGTaGCTTTGGAGCCCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YVRSLHQKAKITNKTFTTAVPLG*LWSPSP Trigger: TGGAGATGGGCTCCAAAGTCACCCCAGAGGCACTGC...AGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGAACGCACGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR GCA 90 bp | GGTCCTATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACGTAGTCATAGTGCAGTaGCTCTGGGGTGACTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPIEISSVWKRLSTLVVDVVIVQ*LWGDFG Trigger: TCCAAAGTCACCCCAGAGGCACTGCACTATGACTAC...GTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTATAGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGCACTAACACCTCTGTaGCCCCCTGGGAGAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVALTPL*PPGRSA Trigger: TGCGCTTCTCCCAGGGGGCCACAGAGGTGTTAGTGC...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | GTTCGACAGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCAGCTTGCCTCCAGGATaGCCACCTCCTGTCGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRQFIFIGDVYVKTDFKASLPPG*PPPVDC Trigger: GCAATCGACAGGAGGTGGCCATCCTGGAGGCAAGCT...GGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACTGTCGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| 3UTR CAA 72 bp | ACAGTTGACAGGGAGAGATTGCTCTGGGGCATTGCTTaGGGGTTTATTTGTAGTGTCTTGGCTCTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVDRERLLWGIA*GFICSVLALVL Trigger: AAGAACAAGAGCCAAGACACTACAAATAAACCCCAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR GCA 90 bp | TCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAGGAAAGAGACTTCCTTTaGTGGGAGGGGCTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLLEMCMLKQTSKPSVEERDFL*WEGLQA Trigger: AGCCTGCAGCCCCTCCCAGCAAAGGAAGTCTCTTTC...CTCAACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
||
| CDS-3UTR GCA 90 bp | TCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTGTGGACGATTTGATGACCGTCAGCTaGTTGGCCCACTGCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHQKAKITNKTFTTVDDLMTVS*LAHCPK Trigger: CTTCGGGCAGTGGGCCAAGCAGCTGACGGTCATCAA...ATCGTCCACAGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTCGTGCCGCTTGTGCCTaGTGTCCTTGGGCACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVRAACA*CPWAHR Trigger: TCTATGTGCCCAAGGACAGCAGGCACAAGCGGCACG...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | AAGATAACTAATAAAACCTTTACAACTGTGGACGATTCTGTCTCCGGACACTCCTCATTTCCCATTCCTTaGCCTTCTGTAGCACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KITNKTFTTVDDSVSGHSSFPIP*PSVAPS Trigger: GGAGGGTGCTACAGAAGGCCAAGGAATGGGAAATGA...GGAGTGTCCGGAGACAGAATCGTCCACAGTTGTAAAGGTTTTATTAGTTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTAGGCACATCAGCAGCTaGGCTTCTCAGAGATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVRHISS*ASQRWA Trigger: AGCCCATCTCTGAGAAGCGCAGCTGCTGATGTGCCT...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | TCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTGTGGACGATATTGAGCTTCCAGAGTaGCCACGGCCTCTTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHQKAKITNKTFTTVDDIELPE*PRPLPR Trigger: CCTTGGAAGAGGCCGTGGCCACTCTGGAAGCTCAAT...ATCGTCCACAGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR GCA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTAACCACTGTCATTCATaGCCAGGCTGTCGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVNHCHS*PGCRSL Trigger: CAGACTCCGACAGCCTGGGCATGAATGACAGTGGTT...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | AAGATAACTAATAAAACCTTTACAACTGTGGACGATTCTGTCTCCGGACACTCCTGTTCTTCTTCCCTTTaGCATGTTCACAGGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KITNKTFTTVDDSVSGHSCSSSL*HVHRLL Trigger: GAGAAGCCTGTGAACATGGCAAAGGGAAGAAGAACA...GGAGTGTCCGGAGACAGAATCGTCCACAGTTGTAAAGGTTTTATTAGTTATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR GCA 90 bp | TACGTGCGTTCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTCCTCCGCCCGGTTCTTaGCGTACTTGTATTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: YVRSLHQKAKITNKTFTTPPPGS*RTCIDW Trigger: CCAATCAATACAAGTACGGCAAGAACCGGGCGGAGG...AGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGAACGCACGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CCA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAACCTCGTCCTCACTaGAGAATGTCTGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVEPRPH*RMSAGP Trigger: AGGACCTGCAGACATTCTCCAGTGAGGACGAGGTTC...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CCA 90 bp | TACGTGCGTTCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTCATAGGAGCTACTCATaGCGTCAGAGTCATTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YVRSLHQKAKITNKTFTTHRSYS*RQSHCR Trigger: CCTACAATGACTCTGACGCCATGAGTAGCTCCTATG...AGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGAACGCACGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CCA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTTCTGGGGCATTGCTTTaGGGTTTATTTGTAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVSGALL*GLFVVS Trigger: AGACACTACAAATAAACCCCAAAGCAATGCCCCAGA...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS CCA 90 bp | CCTCGGCCTGCTCCCTGCTCTGCAGAGCCAGCACTAACACCTCTGTaGCCCCCTGGGAGAAGCGCAGCTCGTGCCGCTTGTGCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRPAPCSAEPALTPL*PPGRSAARAACACC Trigger: ACAGCAGGCACAAGCGGCACGAGCTGCGCTTCTCCCAGGGGGCCACAGAGGTGTTAGTGCTGGCTCTGCAGAGCAGGGAGCAGGCCGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS GCA 90 bp | CTCGGGCGGGGGCTTGTTGGGCAAGGGTGGAGGCACATCAGCAGCTaGGCTTCTCAGAGATGGGCTCTTGGTTGGCTCAGGGCTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGRGLVGQGWRHISS*ASQRWALGWLRAGS Trigger: GGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCGCAGCTGCTGATGTGCCTCCACCCTTGCCCAACAAGCCCCCGCCCGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 90 bp | TGCTCCCTGCTCTGCAGAGCCAGCACTAACACCTCTGTGGCCCCCTaGGAGAAGCGCAGCTCGTGCCGCTTGTGCCTGCTGTCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLLCRASTNTSVAP*EKRSSCRLCLLSLG Trigger: GCCCAAGGACAGCAGGCACAAGCGGCACGAGCTGCGCTTCTCCCAGGGGGCCACAGAGGTGTTAGTGCTGGCTCTGCAGAGCAGGGAGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS TCA 90 bp | AGCGCAGCTCGTGCCGCTTGTGCCTGCTGTCCTTGGGCACATAGATaGCAGTGCAGACGTCTAGCGCCAGCCTCAGGTGTGGCTGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAARAACACCPWAHR*QCRRLAPASGVAVG Trigger: ACCGACAGCCACACCTGAGGCTGGCGCTAGACGTCTGCACTGTCATCTATGTGCCCAAGGACAGCAGGCACAAGCGGCACGAGCTGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 90 bp | AGGGTGGAGGCACATCAGCAGCTGCGCTTCTCAGAGATGGGCTCTTaGTTGGCTCAGGGCTGGCTCCTTTGCTGGGTTCCCCATCGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RVEAHQQLRFSEMGS*LAQGWLLCWVPHRP Trigger: CGGACGATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCGCAGCTGCTGATGTGCCTCCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 90 bp | CCAGGGGAAGGGCTTCTTCATAGTAGTCCTCGGGCGGGGGCTTGTTaGGCAAGGGTGGAGGCACATCAGCAGCTGCGCTTCTCAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PGEGLLHSSPRAGAC*ARVEAHQQLRFSEM Trigger: CATCTCTGAGAAGCGCAGCTGCTGATGTGCCTCCACCCTTGCCCAACAAGCCCCCGCCCGAGGACTACTATGAAGAAGCCCTTCCCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 90 bp | AGCGCAGCTCGTGCCGCTTGTGCTTCTCAGAGATGGGCTCTTGGTTaGCTCAGGGCTGGCTCCTTTGCTGGGTTCCCCATCGTCCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SAARAACASQRWALG*LRAGSFAGFPIVRH Trigger: ATGTCGGACGATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCACAAGCGGCACGAGCTGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| CDS CCA 90 bp | CAGCAGCTGCGCTTCTCAGAGATGGGCTCTTGGTTGGCTCAGGGCTaGCTCCTTTGCTGGGTTCCCCATCGTCCGACATATCCCGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QQLRFSEMGSWLAQG*LLCWVPHRPTYPEG Trigger: ACCTTCGGGATATGTCGGACGATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCGCAGCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 90 bp | TGGAGGCACATCAGCAGCTGCGCTTCTCAGAGATGGGCTCTTGGTTaGCTCAGGGCTGGCTCCTTTGCTGGGTTCCCCATCGTCCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: WRHISSCASQRWALG*LRAGSFAGFPIVRH Trigger: ATGTCGGACGATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCGCAGCTGCTGATGTGCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 90 bp | GGCTTCTTCATAGTAGTCCTCGGGCGGGGGCTTGTTGGGCAAGGGTaGAGGCACATCAGCAGCTGCGCTTCTCAGAGATGGGCTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GFFIVVLGRGLVGQG*RHISSCASQRWALG Trigger: ACCAAGAGCCCATCTCTGAGAAGCGCAGCTGCTGATGTGCCTCCACCCTTGCCCAACAAGCCCCCGCCCGAGGACTACTATGAAGAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 90 bp | TTCTCAGAGATGGGCTCTTGGTTGGCTCAGGGCTGGCTCCTTTGCTaGGTTCCCCATCGTCCGACATATCCCGAAGGTCACCCAGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSEMGSWLAQGWLLC*VPHRPTYPEGHPGH Trigger: GTGACCTGGGTGACCTTCGGGATATGTCGGACGATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| CDS CCA 90 bp | TGCCGCTTGTGCTTCTCAGAGATGGGCTCTTGGTTGGCTCAGGGCTaGCTCCTTTGCTGGGTTCCCCATCGTCCGACATATCCCGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CRLCFSEMGSWLAQG*LLCWVPHRPTYPEG Trigger: ACCTTCGGGATATGTCGGACGATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCACAAGCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| CDS-3UTR CAA 90 bp | CACGCCTCCCTTCCCACAATCCTTAAAACCATGCGGACAGTCAAGCTGGTCTTTGCGTGGCGCTTGACTTaGACCTGCGGGTCCGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: HASLPTILKTMRTVKLVFAWRLT*TCGSAR Trigger: CCGTGCGGACCCGCAGGTCAAAGTCAAGCGCCACGC...AAAGACCAGCTTGACTGTCCGCATGGTTTTAAGGATTGTGGGAAGGGAGGCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 90 bp | GCCACAGCCATCTTCTTCTCCAGGGTGCTGTCGCTGAGATACTCATaGTCCAGGAGGCTGAGGAGTCCGGTGAGCTCTGGGATTAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ATAIFFSRVLSLRYS*SRRLRSPVSSGISC Trigger: ACAGCTAATCCCAGAGCTCACCGGACTCCTCAGCCTCCTGGACCATGAGTATCTCAGCGACAGCACCCTGGAGAAGAAGATGGCTGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| CDS-3UTR CAA 90 bp | ACAACTGTGGACGATTCTGTCTCCGGACACTCCCAGCTCCACCCTTTGTCTAGCCTCAGAGATGGGCTCTaGGTTGGCTCAGGGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TTVDDSVSGHSQLHPLSSLRDGL*VGSGLA Trigger: AGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAG...GCTAGACAAAGGGTGGAGCTGGGAGTGTCCGGAGACAGAATCGTCCACAGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| CDS-3UTR CAA 90 bp | TACAACACTAGCAGCACTTCAACACTGGCTTCCTTTGCTCTAAGGATGGGACTGTCCTCGGGCGGGGGCTaGTTGGGCAAGGGTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YNTSSTSTLASFALRMGLSSGGG*LGKGGG Trigger: GCCTCCACCCTTGCCCAACAAGCCCCCGCCCGAGGA...CAGTCCCATCCTTAGAGCAAAGGAAGCCAGTGTTGAAGTGCTGCTAGTGTTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | CGCTTCCACGCCTCCCTTCCCACAATCCTTAAAACCATGCGGACAGTCAAGCTGTGTCCTCTGAGCAGCTaGCCTCCAGGATGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: RFHASLPTILKTMRTVKLCPLSS*PPGWPP Trigger: AGGTGGCCATCCTGGAGGCAAGCTGCTCAGAGGACA...CAGCTTGACTGTCCGCATGGTTTTAAGGATTGTGGGAAGGGAGGCGTGGAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | CTTCCTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTGAGATGGGCTCTTGGTaGGCTCAGGGCTGGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPQARELQPQSQELQCHIEMGSW*AQGWLL Trigger: AAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTC...AATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| CDS-3UTR CAA 90 bp | CTTCCTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTGCCTCTGGGGTGACTTaGGAGCCCATCTCCACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPQARELQPQSQELQCHIASGVT*EPISTS Trigger: GCTAGTGGAGATGGGCTCCAAAGTCACCCCAGAGGC...AATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS GCA 90 bp | GTAGCTGTTGTCTGCGTCCTCGTAGTAACCGTCCACAATCGACTGTaGAGGGCTGCAGCCATTGTGAGAGCTGATATACTCGGGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: VAVVCVLVVTVHNRL*RAAAIVRADILGGL Trigger: AAGTCCCCCGAGTATATCAGCTCTCACAATGGCTGCAGCCCTGCACAGTCGATTGTGGACGGTTACTACGAGGACGCAGACAACAGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTTTCACAGCTACCAGCTaGAGCTCCAGGTCGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPQARELQPQSQELQCHIFTATS*SSRSIL Trigger: GAGGATCGACCTGGAGCTCAAGCTGGTAGCTGTGAA...AATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS GCA 90 bp | GTTCTTCAGTTCTCCATTCATCCTTGTGGTGGGGTAGCTGTTGTCTaGGTCCTCGTAGTAACCGTCCACAATCGACTGTGCAGGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLQFSIHPCGGVAVV*VLVVTVHNRLCRAA Trigger: TGCAGCCCTGCACAGTCGATTGTGGACGGTTACTACGAGGACGCAGACAACAGCTACCCCACCACAAGGATGAATGGAGAACTGAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CAA 90 bp | CTCTTTCTCAGTTCAGAAACACAGTTGACAGGGAGAGATTGCTCTGGGGCATTGGAGATGGGCTCTTGGTaGGCTCAGGGCTGGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFLSSETQLTGRDCSGALEMGSW*AQGWLL Trigger: AAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTC...CAATGCCCCAGAGCAATCTCTCCCTGTCAACTGTGTTTCTGAACTGAGAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
||
| CDS-3UTR CAA 90 bp | CACGCCTCCCTTCCCACAATCCTTAAAACCATGCGGACAGTCAAGCTGGTCTTTTGGCTCTTGTTCTTGTaGCTCACGGACAGACCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HASLPTILKTMRTVKLVFWLLFL*LTDRPR Trigger: CCTCGGTCTGTCCGTGAGCAACAAGAACAAGAGCCA...AAAGACCAGCTTGACTGTCCGCATGGTTTTAAGGATTGTGGGAAGGGAGGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CAA 90 bp | ACAACTGTGGACGATTCTGTCTCCGGACACTCCCAGCTCCACCCTTTGTCTAGCGTAGTGTCTTGGCTCTaGTTCTTGTTGCTCACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TTVDDSVSGHSQLHPLSSVVSWL*FLLLTD Trigger: GTCCGTGAGCAACAAGAACAAGAGCCAAGACACTAC...GCTAGACAAAGGGTGGAGCTGGGAGTGTCCGGAGACAGAATCGTCCACAGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
||
| CDS-3UTR CAA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCCGCAGCTCGTGCCGCTaGTGCCTGCTGTCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IEISSVWKRLSTLVVDMSRSSCR*CLLSLG Trigger: GCCCAAGGACAGCAGGCACAAGCGGCACGAGCTGCG...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | TACAACACTAGCAGCACTTCAACACTGGCTTCCTTTGCTCTAAGGATGGGACTGAGCACCCTCCCTTGGTaGGAGGTCACAATGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: YNTSSTSTLASFALRMGLSTLPW*EVTMDG Trigger: TCCATCCATTGTGACCTCCAACCAAGGGAGGGTGCT...CAGTCCCATCCTTAGAGCAAAGGAAGCCAGTGTTGAAGTGCTGCTAGTGTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | TCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAGATGACCGTCAGCTGCTaGGCCCACTGCCCGAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: SSLLEMCMLKQTSKPSVEMTVSC*AHCPKR Trigger: GCGCTTCGGGCAGTGGGCCAAGCAGCTGACGGTCAT...CTCAACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCGCCACCTCCTGTCGATaGCGCAGGATCCTGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: IEISSVWKRLSTLVVDMSATSCR*RRILKA Trigger: TGCCTTCAGGATCCTGCGCAATCGACAGGAGGTGGC...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | TCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAGCTGGAGGCGTGGCGCTaGACTTTGACCTGCGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SSLLEMCMLKQTSKPSVELEAWR*TLTCGS Trigger: GGACCCGCAGGTCAAAGTCAAGCGCCACGCCTCCAG...CTCAACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | TACGTGCGTTCATTGCATCAGAAGGCAAAGATAACTAATAAAACCTTTACAACTATGATGCGCGTGATCTaGCGGCCGGCAGCCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: YVRSLHQKAKITNKTFTTMMRVI*RPAALL Trigger: GAGCAGGGCTGCCGGCCGCAAGATCACGCGCATCAT...AGTTGTAAAGGTTTTATTAGTTATCTTTGCCTTCTGATGCAATGAACGCACGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | AAGATAACTAATAAAACCTTTACAACTGTGGACGATTCTGTCTCCGGACACTCCGCATACAGGAAGGAGTaGCGCCCAGCACTGACGATG | + |
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Preference number: 5 (lower is better) Translates to: KITNKTFTTVDDSVSGHSAYRKE*RPALTM Trigger: CATCGTCAGTGCTGGGCGCAACTCCTTCCTGTATGC...GGAGTGTCCGGAGACAGAATCGTCCACAGTTGTAAAGGTTTTATTAGTTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | TACAACACTAGCAGCACTTCAACACTGGCTTCCTTTGCTCTAAGGATGGGACTGGATTGCTCTGGGGCATaGCTTTGGGGTTTATTTGTA | + |
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Preference number: 5 (lower is better) Translates to: YNTSSTSTLASFALRMGLDCSGA*LWGLFV Trigger: TACAAATAAACCCCAAAGCAATGCCCCAGAGCAATC...CAGTCCCATCCTTAGAGCAAAGGAAGCCAGTGTTGAAGTGCTGCTAGTGTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTCTCAGAGATGGGCTCTaGGTTGGCTCAGGGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVLRDGL*VGSGLA Trigger: AGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAG...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| CDS-3UTR CAA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCGACAGCGCCTTCTTCTaGGAGAAACTGATGATGCGC | + |
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Preference number: 5 (lower is better) Translates to: IEISSVWKRLSTLVVDMSDSAFF*EKLMMR Trigger: GCGCATCATCAGTTTCTCCAAGAAGAAGGCGCTGTC...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | ATAGAAATATCAAGTGTTTGGAAAAGGCTTAGCACCCTTGTGGTAGACATGAGCTCTTGGCTCTTGTTCTaGTTGCTCACGGACAGACCG | + |
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Preference number: 5 (lower is better) Translates to: IEISSVWKRLSTLVVDMSSWLLF*LLTDRP Trigger: CGGTCTGTCCGTGAGCAACAAGAACAAGAGCCAAGA...GCTCATGTCTACCACAAGGGTGCTAAGCCTTTTCCAAACACTTGATATTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | CTCAGGCCAGAGAGCTTCAACCACAGTCCCAGGAGCTTCAGTGTCACATTAAGTTTTATTTGTAGTGTCTaGGCTCTTGTTCTTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LRPESFNHSPRSFSVTLSFICSV*ALVLVA Trigger: AGCAACAAGAACAAGAGCCAAGACACTACAAATAAA...ACTTAATGTGACACTGAAGCTCCTGGGACTGTGGTTGAAGCTCTCTGGCCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | TGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAGACAGTCATTGAATGGCATCCGTTCCTTCCAGCCTaGGTTTACCAGCACATTCAG | + |
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Preference number: 5 (lower is better) Translates to: CMLKQTSKPSVETVIEWHPFLPA*VYQHIQ Trigger: CTGAATGTGCTGGTAAACCAAGGCTGGAAGGAACGG...ATGCCATTCAATGACTGTCTCAACACTGGGCTTTGAAGTCTGTTTTAACATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | GTTCGACAGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCGACTTTGCTCCTGGGTaGTTCCGAATGGCTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: VRQFIFIGDVYVKTDFKADFAPG*FRMASF Trigger: GAAGGAAGCCATTCGGAACAACCCAGGAGCAAAGTC...GGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACTGTCGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | TGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGAGACAGTCATTGAATGGCATCTGTTCTTCTTCCCTTaGCCATGTTCACAGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: CMLKQTSKPSVETVIEWHLFFFP*PCSQAS Trigger: AGAAGCCTGTGAACATGGCAAAGGGAAGAAGAACAG...ATGCCATTCAATGACTGTCTCAACACTGGGCTTTGAAGTCTGTTTTAACATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS-3UTR CAA 90 bp | AGTTCATCTTTATTGGAGATGTGTATGTTAAAACAGACTTCAAAGCCCAGTGTTGTTGACAGGGAGAGATaGCTCTGGGGCATTGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SSSLLEMCMLKQTSKPSVVDRER*LWGIAL Trigger: CAAAGCAATGCCCCAGAGCAATCTCTCCCTGTCAAC...AACACTGGGCTTTGAAGTCTGTTTTAACATACACATCTCCAATAAAGATGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 72 bp | CTCTGCAGAGCCAGCACTAACACCTCTGTGGCCCCCTaGGAGAAGCGCAGCTCGTGCCGCTTGTGCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LCRASTNTSVAP*EKRSSCRLCLL Trigger: CAGCAGGCACAAGCGGCACGAGCTGCGCTTCTCCCAGGGGGCCACAGAGGTGTTAGTGCTGGCTCTGCAGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 72 bp | GGGCTTCTTCATAGTAGTCCTCGGGCGGGGGCTTGTTaGGCAAGGGTGGAGGCACATCAGCAGCTGCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GLLHSSPRAGAC*ARVEAHQQLRF Trigger: GAAGCGCAGCTGCTGATGTGCCTCCACCCTTGCCCAACAAGCCCCCGCCCGAGGACTACTATGAAGAAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CAA 72 bp | TCTGTGGCCCCCTGGGAGAAGCGCAGCTCGTGCCGCTaGTGCTTCTCAGAGATGGGCTCTTGGTTGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SVAPWEKRSSCR*CFSEMGSWLAQ Trigger: CTGAGCCAACCAAGAGCCCATCTCTGAGAAGCACAAGCGGCACGAGCTGCGCTTCTCCCAGGGGGCCACAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| CDS CAA 90 bp | GTGGAGGCACATCAGCAGCTGCGCTTCTCAGAGATGGGCTCTTGGTaGGCTCAGGGCTGGCTCCTTTGCTGGGTTCCCCATCGTCCGACA | + |
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Preference number: 6 (lower is better) Translates to: VEAHQQLRFSEMGSW*AQGWLLCWVPHRPT Trigger: TGTCGGACGATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCGCAGCTGCTGATGTGCCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS TCA 72 bp | CGTGCCGCTTGTGCCTGCTGTCCTTGGGCACATAGATaGCAGTGCAGACGTCTAGCGCCAGCCTCAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RAACACCPWAHR*QCRRLAPASGV Trigger: CACACCTGAGGCTGGCGCTAGACGTCTGCACTGTCATCTATGTGCCCAAGGACAGCAGGCACAAGCGGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS GCA 72 bp | GGGCTTGTTGGGCAAGGGTGGAGGCACATCAGCAGCTaGGCTTCTCAGAGATGGGCTCTTGGTTGGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GLVGQGWRHISS*ASQRWALGWLR Trigger: CCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCGCAGCTGCTGATGTGCCTCCACCCTTGCCCAACAAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS GCA 72 bp | AACACCTCTGTGGCCCCCTGGGAGAAGCGCAGCTCGTaGCGCTTGTGCTTCTCAGAGATGGGCTCTTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: NTSVAPWEKRSS*RLCFSEMGSWL Trigger: CAACCAAGAGCCCATCTCTGAGAAGCACAAGCGGCACGAGCTGCGCTTCTCCCAGGGGGCCACAGAGGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| CDS CCA 72 bp | GGGTGGAGGCACATCAGCAGCTGCGCTTCTCAGAGATaGGCTCTTGGTTGGCTCAGGGCTGGCTCCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GWRHISSCASQR*ALGWLRAGSFA Trigger: AGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCGCAGCTGCTGATGTGCCTCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 72 bp | CGTGCCGCTTGTGCTTCTCAGAGATGGGCTCTTGGTTaGCTCAGGGCTGGCTCCTTTGCTGGGTTCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: RAACASQRWALG*LRAGSFAGFPI Trigger: GATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCACAAGCGGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| CDS CCA 72 bp | ATGGGCTCTTGGTTGGCTCAGGGCTGGCTCCTTTGCTaGGTTCCCCATCGTCCGACATATCCCGAAGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: MGSWLAQGWLLC*VPHRPTYPEGH Trigger: GTGACCTTCGGGATATGTCGGACGATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| CDS CCA 72 bp | ATCAGCAGCTGCGCTTCTCAGAGATGGGCTCTTGGTTaGCTCAGGGCTGGCTCCTTTGCTGGGTTCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: ISSCASQRWALG*LRAGSFAGFPI Trigger: GATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCGCAGCTGCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 72 bp | CGCTTCTCAGAGATGGGCTCTTGGTTGGCTCAGGGCTaGCTCCTTTGCTGGGTTCCCCATCGTCCGACATAT | + |
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Preference number: 6 (lower is better) Translates to: RFSEMGSWLAQG*LLCWVPHRPTY Trigger: ATATGTCGGACGATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 72 bp | TGCTTCTCAGAGATGGGCTCTTGGTTGGCTCAGGGCTaGCTCCTTTGCTGGGTTCCCCATCGTCCGACATAT | + |
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Preference number: 6 (lower is better) Translates to: CFSEMGSWLAQG*LLCWVPHRPTY Trigger: ATATGTCGGACGATGGGGAACCCAGCAAAGGAGCCAGCCCTGAGCCAACCAAGAGCCCATCTCTGAGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154876.8 |
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| CDS GCA 72 bp | GAGAGACTCCACAAAGCTGGGCCCCGAGTGCAGGTCTaGAGTGTTCACATACAGGAAAGAGACTTCCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: ERLHKAGPRVQV*SVHIQERDFLC Trigger: GCAAAGGAAGTCTCTTTCCTGTATGTGAACACTGCAGACCTGCACTCGGGGCCCAGCTTTGTGGAGTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120472.2 ENSMUST00000154876.8 |
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| CDS GCA 72 bp | GTCTGCGTCCTCGTAGTAACCGTCCACAATCGACTGTaGAGGGCTGCAGCCATTGTGAGAGCTGATATACTC | + |
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Preference number: 6 (lower is better) Translates to: VCVLVVTVHNRL*RAAAIVRADIL Trigger: GAGTATATCAGCTCTCACAATGGCTGCAGCCCTGCACAGTCGATTGTGGACGGTTACTACGAGGACGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS GCA 72 bp | TTCTCCATTCATCCTTGTGGTGGGGTAGCTGTTGTCTaGGTCCTCGTAGTAACCGTCCACAATCGACTGTGC | + |
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Preference number: 6 (lower is better) Translates to: FSIHPCGGVAVV*VLVVTVHNRLC Trigger: GCACAGTCGATTGTGGACGGTTACTACGAGGACGCAGACAACAGCTACCCCACCACAAGGATGAATGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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| CDS CCA 72 bp | CCTCCTCCTCGTCGTAGGATTCATAGGAGCTACTCATaGCGTCAGAGTCATTGTAGGAGTTCTTCAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: PPPRRRIHRSYS*RQSHCRSSSVL Trigger: GAGAACTGAAGAACTCCTACAATGACTCTGACGCCATGAGTAGCTCCTATGAATCCTACGACGAGGAGGAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120472.2 |
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