Pregenerated sensors for AEN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030609Ensembl transcript IDs: ENSMUST00000107421.8, ENSMUST00000107423.2, ENSMUST00000107425.8, ENSMUST00000138167.2, ENSMUST00000205861.2, ENSMUST00000205882.2
Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAGCCCTGGGCCTTCCCTGGCCTCACACACCTTCAGCCCAGCTTaGGCATCCAGAAAGGACCAGTTCACTCACTTTTCCAGATGCACT | + |
|
Preference number: 1 (lower is better) Translates to: QSPGPSLASHTFSPA*ASRKDQFTHFSRCT Trigger: AGTGCATCTGGAAAAGTGAGTGAACTGGTCCTTTCTGGATGCTCAAGCTGGGCTGAAGGTGTGTGAGGCCAGGGAAGGCCCAGGGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 90 bp | GGGTGCGATAAGCTCCCTGCTTACTATGCTACCTGGCACAAACACTaGATCATGCCCCAGTGTCTGACACCTCTGACCACAAAGGCTGAC | + |
|
Preference number: 1 (lower is better) Translates to: GCDKLPAYYATWHKH*IMPQCLTPLTTKAD Trigger: GTCAGCCTTTGTGGTCAGAGGTGTCAGACACTGGGGCATGATGCAGTGTTTGTGCCAGGTAGCATAGTAAGCAGGGAGCTTATCGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 90 bp | CTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGTaGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: LQPTNATAQYQGWRK*LLFKETRAHPGARP Trigger: TGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CCA 90 bp | GTTATACCACAAGCAGTCATAGTGCGCCTTCCATTTGCCCTCTTGTaGTTCCTCAGAGCTGGGCCTCAGCTCCCAGAACCCTGCCTGAAT | + |
|
Preference number: 1 (lower is better) Translates to: VIPQAVIVRLPFALL*FLRAGPQLPEPCLN Trigger: ATTCAGGCAGGGTTCTGGGAGCTGAGGCCCAGCTCTGAGGAACCACAAGAGGGCAAATGGAAGGCGCACTATGACTGCTTGTGGTATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 90 bp | ATCCTTTTCTGTTATACCACAAGCAGTCATAGTGCGCCTTCCATTTaGCCTCTTGTGGTTCCTCAGAGCTGGGCCTCAGCTCCCAGAACC | + |
|
Preference number: 1 (lower is better) Translates to: ILFCYTTSSHSAPSI*PLVVPQSWASAPRT Trigger: GGTTCTGGGAGCTGAGGCCCAGCTCTGAGGAACCACAAGAGGGCAAATGGAAGGCGCACTATGACTGCTTGTGGTATAACAGAAAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR TCA 90 bp | AGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTaGCTAACTAACGCTTTCTGTAATCAGTGGACAGTGGGAAGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: SPLSLAGRSQKSNNP*LTNAFCNQWTVGSV Trigger: CACACTTCCCACTGTCCACTGATTACAGAAAGCGTTAGTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR TCA 90 bp | CCTCAGAGCTGGGCCTCAGCTCCCAGAACCCTGCCTGAATTATGCTaGACGTTTGTCCAAGAATACAGTGCTTTTTGCTGGATCCAGGTA | + |
|
Preference number: 1 (lower is better) Translates to: PQSWASAPRTLPELC*TFVQEYSAFCWIQV Trigger: TACCTGGATCCAGCAAAAAGCACTGTATTCTTGGACAAACGTTCAGCATAATTCAGGCAGGGTTCTGGGAGCTGAGGCCCAGCTCTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 90 bp | CACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATAGCTaGTCAGAAACCAGGCCTGAACAGAGCCCCATCCTGTTTATCACT | + |
|
Preference number: 1 (lower is better) Translates to: HLIRWKSQETYLSNS*SETRPEQSPILFIT Trigger: AGTGATAAACAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAGCAGCTATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR GCA 90 bp | CTCATGCACTTACCATCTGAGAACACACAATCCAGAGAAACAATGTaGCCAGACCCAGAGTCTGAGGCCTTGGCAGTTAAGGGCAAGCGT | + |
|
Preference number: 1 (lower is better) Translates to: LMHLPSENTQSRETM*PDPESEALAVKGKR Trigger: ACGCTTGCCCTTAACTGCCAAGGCCTCAGACTCTGGGTCTGGGCACATTGTTTCTCTGGATTGTGTGTTCTCAGATGGTAAGTGCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 90 bp | GCCCTCTTGTGGTTCCTCAGAGCTGGGCCTCAGCTCCCAGAACCCTaGCTGAATTATGCTGAACGTTTGTCCAAGAATACAGTGCTTTTT | + |
|
Preference number: 1 (lower is better) Translates to: ALLWFLRAGPQLPEP*LNYAERLSKNTVLF Trigger: AAAAAGCACTGTATTCTTGGACAAACGTTCAGCATAATTCAGGCAGGGTTCTGGGAGCTGAGGCCCAGCTCTGAGGAACCACAAGAGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 90 bp | TCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTaGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGT | + |
|
Preference number: 1 (lower is better) Translates to: SFTLQPTNATAQYQG*RKWLLFKETRAHPG Trigger: ACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CCA 90 bp | ACAGCAAGATCTGGAAAGCCCCATGAGGAGCAAACTGTTAAGAACTaGCTCGATCCCCTCTGCCATATACAGGAGGAGCACACATGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: TARSGKPHEEQTVKN*LDPLCHIQEEHTWK Trigger: CTTCCATGTGTGCTCCTCCTGTATATGGCAGAGGGGATCGAGCCAGTTCTTAACAGTTTGCTCCTCATGGGGCTTTCCAGATCTTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR TCA 90 bp | TCTTGTGGTTCCTCAGAGCTGGGCCTCAGCTCCCAGAACCCTGCCTaGATTATGCTGAACGTTTGTCCAAGAATACAGTGCTTTTTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: SCGSSELGLSSQNPA*IMLNVCPRIQCFLL Trigger: CAGCAAAAAGCACTGTATTCTTGGACAAACGTTCAGCATAATTCAGGCAGGGTTCTGGGAGCTGAGGCCCAGCTCTGAGGAACCACAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 90 bp | TGGGGACGCCTGTCGCAGTCTGGCAGAGGATGTGAATGTGTACAATaGCAATGGCAGTCTCTAAACCAACGCATTCTTTGGAAAAACTCT | + |
|
Preference number: 1 (lower is better) Translates to: WGRLSQSGRGCECVQ*QWQSLNQRILWKNS Trigger: AGAGTTTTTCCAAAGAATGCGTTGGTTTAGAGACTGCCATTGCCATTGTACACATTCACATCCTCTGCCAGACTGCGACAGGCGTCCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 90 bp | GGAGGCAGCTACTGGATGGCTTTTTCTAATCCCTATTTATCACTGTaGAAATGGCTTAAGAGTGGTTCACTGTCCAAGCCTCCTGCCTTG | + |
|
Preference number: 1 (lower is better) Translates to: GGSYWMAFSNPYLSL*KWLKSGSLSKPPAL Trigger: CAAGGCAGGAGGCTTGGACAGTGAACCACTCTTAAGCCATTTGCACAGTGATAAATAGGGATTAGAAAAAGCCATCCAGTAGCTGCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 90 bp | CGCCTGTCGCAGTCTGGCAGAGGATGTGAATGTGTACAATGGCAATaGCAGTCTCTAAACCAACGCATTCTTTGGAAAAACTCTGTACCA | + |
|
Preference number: 1 (lower is better) Translates to: RLSQSGRGCECVQWQ*QSLNQRILWKNSVP Trigger: TGGTACAGAGTTTTTCCAAAGAATGCGTTGGTTTAGAGACTGCCATTGCCATTGTACACATTCACATCCTCTGCCAGACTGCGACAGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 90 bp | CTGCTCACCCATCATGCCTGTAGCTCACAGGAGGCAGCTACTGGATaGCTTTTTCTAATCCCTATTTATCACTGTGCAAATGGCTTAAGA | + |
|
Preference number: 1 (lower is better) Translates to: LLTHHACSSQEAATG*LFLIPIYHCANGLR Trigger: TCTTAAGCCATTTGCACAGTGATAAATAGGGATTAGAAAAAGCCATCCAGTAGCTGCCTCCTGTGAGCTACAGGCATGATGGGTGAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGCAACTCCCCCTCCAGGCCTCTCTGTGTAAGCGCACCTCCTGTCCTCTCCGTAGTGGTGATGATTTaGCCAGCCCCCTTTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LGNSPSRPLCVSAPPVLSVVVMI*PAPFPW Trigger: CCAGGGAAAGGGGGCTGGCCAAATCATCACCACTAC...GGAGAGGACAGGAGGTGCGCTTACACAGAGAGGCCTGGAGGGGGAGTTGCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCAGGCAATACCCTTGCCCTaGGCCCCACCTCATCCGATG | + |
|
Preference number: 2 (lower is better) Translates to: GASGCFLRKQELTLVPGQAIPLP*APPHPM Trigger: CATCGGATGAGGTGGGGCCCAGGGCAAGGGTATTGC...CTGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCAGCCAGCCCCCTTTCCCTaGCAGGGAGGAGCCAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: GASGCFLRKQELTLVPGQPAPFP*QGGARN Trigger: ATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTGG...CTGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCCTTCCCTGGCCTCACACACCTTCAGCCCAGCTTGAGCATCCAGAAAGGAGCAGTGTCAGGAGGCTaGTGTGGAGATAGAAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: WAFPGLTHLQPSLSIQKGAVSGG*CGDRSW Trigger: CCAGCTTCTATCTCCACATCAGCCTCCTGACACTGC...TCCTTTCTGGATGCTCAAGCTGGGCTGAAGGTGTGTGAGGCCAGGGAAGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 90 bp | TCAGAGCCCTGGGCCTTCCCTGGCCTCACACACCTTCAGCCCAGCTaGAGCATCCAGAAAGGACCAGTTCACTCACTTTTCCAGATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SEPWAFPGLTHLQPS*SIQKGPVHSLFQMH Trigger: GTGCATCTGGAAAAGTGAGTGAACTGGTCCTTTCTGGATGCTCAAGCTGGGCTGAAGGTGTGTGAGGCCAGGGAAGGCCCAGGGCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGCAACTCCCCCTCCAGGCCTCTCTGTGTAAGCGCACCTCCTGTCCTCTCCGCGGACCTAGATGCTTaGTGGGCTTTTACTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LGNSPSRPLCVSAPPVLSADLDA*WAFTAF Trigger: AAAAGCAGTAAAAGCCCAGCAAGCATCTAGGTCCGC...GGAGAGGACAGGAGGTGCGCTTACACAGAGAGGCCTGGAGGGGGAGTTGCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCTCCCAGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCACCAGCCCCCTTTCCCTaGCAGGGAGGAGCCAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: ASPSLQFFHPSTHQCYCPPAPFP*QGGARN Trigger: ATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTGG...TGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCTGGGAGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CAA 90 bp | TCTGTTATACCACAAGCAGTCATAGTGCGCCTTCCATTTGCCCTCTaGTGGTTCCTCAGAGCTGGGCCTCAGCTCCCAGAACCCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SVIPQAVIVRLPFAL*WFLRAGPQLPEPCL Trigger: CAGGCAGGGTTCTGGGAGCTGAGGCCCAGCTCTGAGGAACCACAAGAGGGCAAATGGAAGGCGCACTATGACTGCTTGTGGTATAACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTGACTAACGAGACTGTCAGAGGGTaGTGTGACCTGAGCCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: QPPFPGREEPEIKQSVTNETVRG*CDLSLC Trigger: GCAAAGGCTCAGGTCACACCACCCTCTGACAGTCTC...GTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCTCTGAAGCAATACCCTTGCCCTaGGCCCCACCTCATCCGATG | + |
|
Preference number: 2 (lower is better) Translates to: MQCQEADVEIEAGSKTSEAIPLP*APPHPM Trigger: CATCGGATGAGGTGGGGCCCAGGGCAAGGGTATTGC...TTCAGAGGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACAATCCAGAGAAACAATGTGCCCAGACCCAGAGTCTGAGGCCTTGGCAGTTCCAGCCCCCTTTCCCTaGCAGGGAGGAGCCAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: TQSRETMCPDPESEALAVPAPFP*QGGARN Trigger: ATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTGG...AACTGCCAAGGCCTCAGACTCTGGGTCTGGGCACATTGTTTCTCTGGATTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGCAACTCCCCCTCCAGGCCTCTCTGTGTAAGCGCACCTCCTGTCCTCTCCTGCACTTTATTCCTATaGCGATGGTCTGGTACTATG | + |
|
Preference number: 2 (lower is better) Translates to: LGNSPSRPLCVSAPPVLSCTLFL*RWSGTM Trigger: CATAGTACCAGACCATCGGCATAGGAATAAAGTGCA...GGAGAGGACAGGAGGTGCGCTTACACAGAGAGGCCTGGAGGGGGAGTTGCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCAGGTTACCCCAGACCAGTaGCTTTCCACCTTCCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: GASGCFLRKQELTLVPGQVTPDQ*LSTFLM Trigger: CATTAGGAAGGTGGAAAGCCACTGGTCTGGGGTAAC...CTGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGGAGACTGTCAGAGGGTaGTGTGACCTGAGCCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SFTLQPTNATAQYQGWRKETVRG*CDLSLC Trigger: GCAAAGGCTCAGGTCACACCACCCTCTGACAGTCTC...CTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGGTAGTGGTGATGATTTaGCCAGCCCCCTTTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SFTLQPTNATAQYQGWRKVVVMI*PAPFPW Trigger: CCAGGGAAAGGGGGCTGGCCAAATCATCACCACTAC...CTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCTCCCAGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTAGTGGTGATGATTTaGCCAGCCCCCTTTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ASPSLQFFHPSTHQCYCPVVVMI*PAPFPW Trigger: CCAGGGAAAGGGGGCTGGCCAAATCATCACCACTAC...TGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCTGGGAGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGCAACTCCCCCTCCAGGCCTCTCTGTGTAAGCGCACCTCCTGTCCTCTCCAACCAACGCATTCTTTaGAAAAACTCTGTACCACGG | + |
|
Preference number: 2 (lower is better) Translates to: LGNSPSRPLCVSAPPVLSNQRIL*KNSVPR Trigger: CCGTGGTACAGAGTTTTTCCAAAGAATGCGTTGGTT...GGAGAGGACAGGAGGTGCGCTTACACAGAGAGGCCTGGAGGGGGAGTTGCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCCTCAGAAACCAGGCCTaGACAGAGCCCCATCCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FQMQCQEADVEIEAGSKTLRNQA*TEPHPV Trigger: AACAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAG...GGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | CGTTTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGCTCAGAAACCAGGCCTaGACAGAGCCCCATCCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: RFQMQCQEADVEIEAGSKLRNQA*TEPHPV Trigger: AACAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAG...CTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTGACTAACGCCAAGAGACCTACCTaGGCAATAGCTGCTCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QPPFPGREEPEIKQSVTNAKRPT*AIAAQK Trigger: TTTCTGAGCAGCTATTGCTCAGGTAGGTCTCTTGGC...GTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCCAGAGAAACAATGTGCCCAGACCCAGAGTCTGAGGCCTTGGCAGTTAAGGACCCACCAATGCTACTaGCCAGTATCAAGGCTGGCG | + |
|
Preference number: 2 (lower is better) Translates to: NPEKQCAQTQSLRPWQLRTHQCY*PVSRLA Trigger: CGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGT...CCTTAACTGCCAAGGCCTCAGACTCTGGGTCTGGGCACATTGTTTCTCTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGACACATCCCATCAGCTGCTCACCCATCATGCCTGTAGCTCACAGGAGGCAGCTCCCTGCTTACTATaGTACCTGGCACAAACACTG | + |
|
Preference number: 2 (lower is better) Translates to: KDTSHQLLTHHACSSQEAAPCLL*YLAQTL Trigger: CAGTGTTTGTGCCAGGTAGCATAGTAAGCAGGGAGC...TGCCTCCTGTGAGCTACAGGCATGATGGGTGAGCAGCTGATGGGATGTGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGCTGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCGTTACCCCAGACCAGTaGCTTTCCACCTTCCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: QGWRKWLLFKETRAHPGAVTPDQ*LSTFLM Trigger: CATTAGGAAGGTGGAAAGCCACTGGTCTGGGGTAAC...GGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAACAGCAGCTTTACCCTCGGATCCTGTCAGGCTCCTTTTCCAGATGACGCCCAAGGCTGGCGCAAGTaGCTGCTTTTTAAGGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: GNSSFTLGSCQAPFPDDAQGWRK*LLFKET Trigger: TGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTG...GGCGTCATCTGGAAAAGGAGCCTGACAGGATCCGAGGGTAAAGCTGCTGTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCTCCCAGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGCCAAGAGACCTACCTaGGCAATAGCTGCTCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ASPSLQFFHPSTHQCYCPAKRPT*AIAAQK Trigger: TTTCTGAGCAGCTATTGCTCAGGTAGGTCTCTTGGC...TGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCTGGGAGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGGCAGTGTCAGGAGGCTaGTGTGGAGATAGAAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SLQFFHPSTHQCYCPVSRAVSGG*CGDRSW Trigger: CCAGCTTCTATCTCCACATCAGCCTCCTGACACTGC...CCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTGACTAACGCATCCCTTCATTTCTaGCCTGGATTACTGTTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QPPFPGREEPEIKQSVTNASLHF*PGLLLS Trigger: TGACAACAGTAATCCAGGTCAGAAATGAAGGGATGC...GTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCCAGAGAAACAATGTGCCCAGACCCAGAGTCTGAGGCCTTGGCAGTTAAGGTGTGACCTGAGCCTTTaGCTACCAGTGCCCTTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NPEKQCAQTQSLRPWQLRCDLSL*LPVPLS Trigger: ACTTAAGGGCACTGGTAGGCAAAGGCTCAGGTCACA...CCTTAACTGCCAAGGCCTCAGACTCTGGGTCTGGGCACATTGTTTCTCTGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 90 bp | ACACAATCCAGAGAAACAATGTGCCCAGACCCAGAGTCTGAGGCCTaGGCAGTTAAGGGCAAGCGTTCAGTCCTAAGTACAAAACAGTCG | + |
|
Preference number: 2 (lower is better) Translates to: TQSRETMCPDPESEA*AVKGKRSVLSTKQS Trigger: CGACTGTTTTGTACTTAGGACTGAACGCTTGCCCTTAACTGCCAAGGCCTCAGACTCTGGGTCTGGGCACATTGTTTCTCTGGATTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | AATTGCCATGGCTGTGCTTTATCTAAGTCTTCATCAAGCACGTCCCTCAGGTGTCTCAGAAACCAGGCCTaGACAGAGCCCCATCCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: NCHGCALSKSSSSTSLRCLRNQA*TEPHPV Trigger: AACAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAG...ACACCTGAGGGACGTGCTTGATGAAGACTTAGATAAAGCACAGCCATGGCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCACATATGTTTGTTTTCACATCATCCACTATAGGGGCCCTCAGCAAAGCCCTACCTTCAGCCCAGCTTaGGCATCCAGAAAGGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: CTYVCFHIIHYRGPQQSPTFSPA*ASRKDQ Trigger: CTGGTCCTTTCTGGATGCTCAAGCTGGGCTGAAGGT...AGGGCTTTGCTGAGGGCCCCTATAGTGGATGATGTGAAAACAAACATATGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGTCCTGGCATCCATGGACATTTCGGGTCAGTTCTCCAGCATCCTGCTCTCATCAAAGGCTGACAGCTTaGAGGAGGAAATGTAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KSWHPWTFRVSSPASCSHQRLTA*RRKCKG Trigger: CCCTTTACATTTCCTCCTTCAAGCTGTCAGCCTTTG...ATGAGAGCAGGATGCTGGAGAACTGACCCGAAATGTCCATGGATGCCAGGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCCCTGGGCCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATGGTTTTGAGAAACACTaGCTTAGAACTCCAATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: CPGPHLIRWKSQETYLSNGFEKH*LRTPIL Trigger: TAGGATTGGAGTTCTAAGGCAGTGTTTCTCAAAACC...ATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGGCCCAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAAGGACACATCCCATCAGCTGCTCACCCATCATGCCTGTAGCTCACAGGAGGGGTTTTGAGAAACACTaGCTTAGAACTCCAATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PRTHPISCSPIMPVAHRRGFEKH*LRTPIL Trigger: TAGGATTGGAGTTCTAAGGCAGTGTTTCTCAAAACC...CCTCCTGTGAGCTACAGGCATGATGGGTGAGCAGCTGATGGGATGTGTCCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | CGTTTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGTACCTGAGCAATAGCTaGTCAGAAACCAGGCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: RFQMQCQEADVEIEAGSKYLSNS*SETRPE Trigger: TTCAGGCCTGGTTTCTGAGCAGCTATTGCTCAGGTA...CTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCCAGAGAAACAATGTGCCCAGACCCAGAGTCTGAGGCCTTGGCAGTTAAGGAACCTCAGAAAGCAATaGGGACCTAGATGCTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: NPEKQCAQTQSLRPWQLRNLRKQ*GPRCLL Trigger: CAGCAAGCATCTAGGTCCGCATTGCTTTCTGAGGTT...CCTTAACTGCCAAGGCCTCAGACTCTGGGTCTGGGCACATTGTTTCTCTGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCCTGGCATCCATGGACATTTCGGGTCAGTTCTCCAGCATCCTGCTCTCATGCTTTCTGTAATCAGTaGACAGTGGGAAGTGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: KSWHPWTFRVSSPASCSHAFCNQ*TVGSVV Trigger: GACCACACTTCCCACTGTCCACTGATTACAGAAAGC...ATGAGAGCAGGATGCTGGAGAACTGACCCGAAATGTCCATGGATGCCAGGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAACGTTTGTCCAAGAATACAGTGCTTTTTGCTGGATCCAGGTACTGGGTACAGGTCCACAGGCAGTaGTCAAGTGACAGCAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: AERLSKNTVLFAGSRYWVQVHRQ*SSDSKS Trigger: ACTCTTGCTGTCACTTGATCACTGCCTGTGGACCTG...TACCCAGTACCTGGATCCAGCAAAAAGCACTGTATTCTTGGACAAACGTTCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTGTCAGGAATGATGAGTGTGACCTGAGCCTTTaGCTACCAGTGCCCTTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: GKATGLSSVSMLSVRNDECDLSL*LPVPLS Trigger: ACTTAAGGGCACTGGTAGGCAAAGGCTCAGGTCACA...CTCATCATTCCTGACACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGGTTACCCCAGACCAGTaGCTTTCCACCTTCCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: SLQFFHPSTHQCYCPVSRVTPDQ*LSTFLM Trigger: CATTAGGAAGGTGGAAAGCCACTGGTCTGGGGTAAC...CCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCACCTTCATTTCTGACCTaGATTACTGTTGTCACGTTT | + |
|
Preference number: 2 (lower is better) Translates to: WRKWLLFKETRAHPGARPPSFLT*ITVVTF Trigger: AAACGTGACAACAGTAATCCAGGTCAGAAATGAAGG...TGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGGGTTTTGAGAAACACTaGCTTAGAACTCCAATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: SFTLQPTNATAQYQGWRKGFEKH*LRTPIL Trigger: TAGGATTGGAGTTCTAAGGCAGTGTTTCTCAAAACC...CTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGGCTTTCTGTAATCAGTaGACAGTGGGAAGTGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SLQFFHPSTHQCYCPVSRAFCNQ*TVGSVV Trigger: GACCACACTTCCCACTGTCCACTGATTACAGAAAGC...CCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCCTGCCTTGCCATGTCGTCTTTTGCACATATGTTTGTTTTCACATCATCCCATGCACTTACCATCTaGGAACACACAATCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ASCLAMSSFAHMFVFTSSHALTI*EHTIQR Trigger: TCTCTGGATTGTGTGTTCTCAGATGGTAAGTGCATG...GGATGATGTGAAAACAAACATATGTGCAAAAGACGACATGGCAAGGCAGGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 90 bp | ATGATAACTGCCTACTCCTACAAAGAATCTCCTTTGTGCCCTTGTTaGCACCAACAAAGATGGTTCCAGAACTCTCATGCACTTACCATC | + |
|
Preference number: 2 (lower is better) Translates to: MITAYSYKESPLCPC*HQQRWFQNSHALTI Trigger: GATGGTAAGTGCATGAGAGTTCTGGAACCATCTTTGTTGGTGCAAACAAGGGCACAAAGGAGATTCTTTGTAGGAGTAGGCAGTTATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCATATATACGGCTATCTTATTCACAATAGCAAGAGAGGAAGTGACCGAACGTTACCTGAGCAATAGCTaGTCAGAAACCAGGCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: TIYTAILFTIAREEVTERYLSNS*SETRPE Trigger: TTCAGGCCTGGTTTCTGAGCAGCTATTGCTCAGGTA...ACGTTCGGTCACTTCCTCTCTTGCTATTGTGAATAAGATAGCCGTATATATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGAAAACAGGGTAACATATCTGCATACCATATATACGGCTATCTTATTCACAGCTGGCGCAAGTGGCTaGTTTTTAAGGAAACAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LENRVTYLHTIYTAILFTAGASG*FLRKQE Trigger: CTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGC...TGTGAATAAGATAGCCGTATATATGGTATGCAGATATGTTACCCTGTTTTCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CCA 90 bp | ATACACAAAGGACTTAGTCCTAAAGGGCAGTCTTACAGGAAAGACAGTATATGCCCTTCATTTCTGACCTaGATTACTGTTGTCACGTTT | + |
|
Preference number: 2 (lower is better) Translates to: IHKGLSPKGQSYRKDSICPSFLT*ITVVTF Trigger: AAACGTGACAACAGTAATCCAGGTCAGAAATGAAGG...GCATATACTGTCTTTCCTGTAAGACTGCCCTTTAGGACTAAGTCCTTTGTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | TCATCAAGCACGTCCCTCAGGTGTTTTGTTATAGAATACAAAACAGCCTTAAACACTCACTTTTCCAGATaGACTTTATTCCTATGCCGA | + |
|
Preference number: 2 (lower is better) Translates to: SSSTSLRCFVIEYKTALNTHFSR*TLFLCR Trigger: TCGGCATAGGAATAAAGTGCATCTGGAAAAGTGAGT...GTTTAAGGCTGTTTTGTATTCTATAACAAAACACCTGAGGGACGTGCTTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR GCA 90 bp | TCATCAAGCACGTCCCTCAGGTGTTTTGTTATAGAATACAAAACAGCCTTAAACAAAGAATCTCCTTTGTaGCCTTGTTTGCACCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: SSSTSLRCFVIEYKTALNKESPL*PCLHQQ Trigger: TTGTTGGTGCAAACAAGGGCACAAAGGAGATTCTTT...GTTTAAGGCTGTTTTGTATTCTATAACAAAACACCTGAGGGACGTGCTTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | GAGCATCCAGCAAGGCTCAGAGCCCTGGGCCTTCCCTaGCCTCACACACCTTCAGCCCAGCTTGAGCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: EHPARLRALGLP*PHTPSAQLEHP Trigger: TGGATGCTCAAGCTGGGCTGAAGGTGTGTGAGGCCAGGGAAGGCCCAGGGCTCTGAGCCTTGCTGGATGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | GCGCCTTCCATTTGCCCTCTTGTGGTTCCTCAGAGCTaGGCCTCAGCTCCCAGAACCCTGCCTGAATTATGC | + |
|
Preference number: 3 (lower is better) Translates to: APSICPLVVPQS*ASAPRTLPELC Trigger: GCATAATTCAGGCAGGGTTCTGGGAGCTGAGGCCCAGCTCTGAGGAACCACAAGAGGGCAAATGGAAGGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | CAAGCAGTCATAGTGCGCCTTCCATTTGCCCTCTTGTaGTTCCTCAGAGCTGGGCCTCAGCTCCCAGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: QAVIVRLPFALL*FLRAGPQLPEP Trigger: GGGTTCTGGGAGCTGAGGCCCAGCTCTGAGGAACCACAAGAGGGCAAATGGAAGGCGCACTATGACTGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | TCCAAAGGCCAGGAGACTACACCTGCATCATCTGCTTaGCAACTCCCCCTCCAGGCCTCTCTGTGTAAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: SKGQETTPASSA*QLPLQASLCKR Trigger: GCGCTTACACAGAGAGGCCTGGAGGGGGAGTTGCCAAGCAGATGATGCAGGTGTAGTCTCCTGGCCTTTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTTTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGTCCCCTGCAATACCCTaGCCCTGGGCCCCACCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RFQMQCQEADVEIEAGSKSPAIP*PWAPPH Trigger: ATGAGGTGGGGCCCAGGGCAAGGGTATTGCAGGGGA...CTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGACACATCCCATCAGCTGCTCACCCATCATGCCTGTAGCTCACAGGAGGCAGGACACCGGGTGGGGTaGCTGAACCTCAGAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KDTSHQLLTHHACSSQEAGHRVG*LNLRKQ Trigger: TTGCTTTCTGAGGTTCAGCAACCCCACCCGGTGTCC...TGCCTCCTGTGAGCTACAGGCATGATGGGTGAGCAGCTGATGGGATGTGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR TCA 72 bp | GGGCCTTCCCTGGCCTCACACACCTTCAGCCCAGCTTaGGCATCCAGAAAGGACCAGTTCACTCACTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GPSLASHTFSPA*ASRKDQFTHFS Trigger: GGAAAAGTGAGTGAACTGGTCCTTTCTGGATGCTCAAGCTGGGCTGAAGGTGTGTGAGGCCAGGGAAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | CAGATCCCACGCAGGCAGGGCAGAACTGCATACAAATaGCTGAGGCAGCAGCTGAAATCTCAGACTCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QIPRRQGRTAYK*LRQQLKSQTPP Trigger: AGGGGGAGTCTGAGATTTCAGCTGCTGCCTCAGCCATTTGTATGCAGTTCTGCCCTGCCTGCGTGGGATCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCACTGTGCAAATGGCTTAAGAGTGGTTCACTGTCCAAGCCTCCTGCCTTGCTCCCCTGCAATACCCTaGCCCTGGGCCCCACCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: YHCANGLRVVHCPSLLPCSPAIP*PWAPPH Trigger: ATGAGGTGGGGCCCAGGGCAAGGGTATTGCAGGGGA...GCAAGGCAGGAGGCTTGGACAGTGAACCACTCTTAAGCCATTTGCACAGTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | GCTCACTGTGTTGGAGTTTCCTTACGCTTCTGCCTTTaGGGACGCCTGTCGCAGTCTGGCAGAGGATGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: AHCVGVSLRFCL*GRLSQSGRGCE Trigger: TTCACATCCTCTGCCAGACTGCGACAGGCGTCCCCAAAGGCAGAAGCGTAAGGAAACTCCAACACAGTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | GGTGACCGCTGCTGCTTGACAAAGTCCTGGCATCCATaGACATTTCGGGTCAGTTCTCCAGCATCCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GDRCCLTKSWHP*TFRVSSPASCS Trigger: AGAGCAGGATGCTGGAGAACTGACCCGAAATGTCCATGGATGCCAGGACTTTGTCAAGCAGCAGCGGTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | CGATGGAAAAGCCAAGAGACCTACCTGAGCAATAGCTaGTCAGAAACCAGGCCTGAACAGAGCCCCATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RWKSQETYLSNS*SETRPEQSPIL Trigger: CAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAGCAGCTATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | CCCAGCTTACAGTTCTTTCACCCTTCAACCCACCAATaGTACTGCCCAGTATCAAGGCTGGCGCAAGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSLQFFHPSTHQ*YCPVSRLAQVA Trigger: AGCCACTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | GGACACCGGGTGGGGTTGCTGAACCTCAGAAAGCAATaGGGACCTAGATGCTTGCTGGGCTTTTACTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GHRVGLLNLRKQ*GPRCLLGFYCF Trigger: AAAGCAGTAAAAGCCCAGCAAGCATCTAGGTCCGCATTGCTTTCTGAGGTTCAGCAACCCCACCCGGTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | GAAGTAGTGGTGATGATTTGGCCAGCCCCCTTTCCCTaGCAGGGAGGAGCCAGAAATCAAACAATCCGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: EVVVMIWPAPFP*QGGARNQTIRD Trigger: GTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTGGCCAAATCATCACCACTACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | GAGGGGTGCGATAAGCTCCCTGCTTACTATGCTACCTaGCACAAACACTGCATCATGCCCCAGTGTCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: EGCDKLPAYYAT*HKHCIMPQCLT Trigger: TGTCAGACACTGGGGCATGATGCAGTGTTTGTGCCAGGTAGCATAGTAAGCAGGGAGCTTATCGCACCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCTGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCGGGAAAGCCACAGGCTaGTCTAGTGTCTCCATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QGWRKWLLFKETRAHPGAGKATG*SSVSML Trigger: TAACATGGAGACACTAGACAAGCCTGTGGCTTTCCC...GGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCAGGGAAAGCCACAGGCTaGTCTAGTGTCTCCATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: WRKWLLFKETRAHPGARPGKATG*SSVSML Trigger: TAACATGGAGACACTAGACAAGCCTGTGGCTTTCCC...TGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACAATCCAGAGAAACAATGTGCCCAGACCCAGAGTCTGAGGCCTTGGCAGTTCACCTTCAGCCCAGCTaGAGCATCCAGAAAGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: TQSRETMCPDPESEALAVHLQPS*SIQKGP Trigger: TGGTCCTTTCTGGATGCTCAAGCTGGGCTGAAGGTG...AACTGCCAAGGCCTCAGACTCTGGGTCTGGGCACATTGTTTCTCTGGATTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR TCA 72 bp | CCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTaGGCAATAGCTGCTCAGAAACCAGGCCTGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: PTSSDGKAKRPT*AIAAQKPGLNR Trigger: TCTGTTCAGGCCTGGTTTCTGAGCAGCTATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR TCA 72 bp | CCTTTGGGGACGCCTGTCGCAGTCTGGCAGAGGATGTaGATGTGTACAATGGCAATGGCAGTCTCTAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: PLGTPVAVWQRM*MCTMAMAVSKP Trigger: TGGTTTAGAGACTGCCATTGCCATTGTACACATTCACATCCTCTGCCAGACTGCGACAGGCGTCCCCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR TCA 72 bp | TCCTCAGAGCTGGGCCTCAGCTCCCAGAACCCTGCCTaGATTATGCTGAACGTTTGTCCAAGAATACAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSELGLSSQNPA*IMLNVCPRIQC Trigger: GCACTGTATTCTTGGACAAACGTTCAGCATAATTCAGGCAGGGTTCTGGGAGCTGAGGCCCAGCTCTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | AAGCTCCCTGCTTACTATGCTACCTGGCACAAACACTaGATCATGCCCCAGTGTCTGACACCTCTGACCACA | + |
|
Preference number: 3 (lower is better) Translates to: KLPAYYATWHKH*IMPQCLTPLTT Trigger: TGTGGTCAGAGGTGTCAGACACTGGGGCATGATGCAGTGTTTGTGCCAGGTAGCATAGTAAGCAGGGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | TGTTATACCACAAGCAGTCATAGTGCGCCTTCCATTTaGCCTCTTGTGGTTCCTCAGAGCTGGGCCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CYTTSSHSAPSI*PLVVPQSWASA Trigger: AGCTGAGGCCCAGCTCTGAGGAACCACAAGAGGGCAAATGGAAGGCGCACTATGACTGCTTGTGGTATAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | TCTGGAAAGCCCCATGAGGAGCAAACTGTTAAGAACTaGCTCGATCCCCTCTGCCATATACAGGAGGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SGKPHEEQTVKN*LDPLCHIQEEH Trigger: GTGCTCCTCCTGTATATGGCAGAGGGGATCGAGCCAGTTCTTAACAGTTTGCTCCTCATGGGGCTTTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | ATGGCTGAGGCAGCAGCTGAAATCTCAGACTCCCCCTaGGAGGGGCTATCAATAGTCAATGAGCAGAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: MAEAAAEISDSP*EGLSIVNEQNC Trigger: ACAGTTCTGCTCATTGACTATTGATAGCCCCTCCCAGGGGGAGTCTGAGATTTCAGCTGCTGCCTCAGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGAGTAGTGGTGATGATTaGGCCAGCCCCCTTTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLQFFHPSTHQCYCPVSRSSGDD*ASPLSL Trigger: CAGGGAAAGGGGGCTGGCCAAATCATCACCACTACT...CCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR TCA 72 bp | GTTGATGAGAATGGAAACTCGGTTACTGTGGGAAAGTaGCGGTTCCTTGGTGTAGACGGTGTGGTGACCGCT | + |
|
Preference number: 3 (lower is better) Translates to: VDENGNSVTVGK*RFLGVDGVVTA Trigger: AGCGGTCACCACACCGTCTACACCAAGGAACCGTCACTTTCCCACAGTAACCGAGTTTCCATTCTCATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR TCA 72 bp | AGCAAGCTTCCCTTGCTTATATACATTACCATTGTCTaGGCCCAGATCCCACGCAGGCAGGGCAGAACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SKLPLLIYITIV*AQIPRRQGRTA Trigger: TGCAGTTCTGCCCTGCCTGCGTGGGATCTGGGCTCAGACAATGGTAATGTATATAAGCAAGGGAAGCTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | TGGTTCCTCAGAGCTGGGCCTCAGCTCCCAGAACCCTaGCTGAATTATGCTGAACGTTTGTCCAAGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: WFLRAGPQLPEP*LNYAERLSKNT Trigger: TGTATTCTTGGACAAACGTTCAGCATAATTCAGGCAGGGTTCTGGGAGCTGAGGCCCAGCTCTGAGGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | ACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGTaGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TNATAQYQGWRK*LLFKETRAHPG Trigger: ACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR TCA 72 bp | TGGGCCTCAGCTCCCAGAACCCTGCCTGAATTATGCTaGACGTTTGTCCAAGAATACAGTGCTTTTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WASAPRTLPELC*TFVQEYSAFCW Trigger: CCAGCAAAAAGCACTGTATTCTTGGACAAACGTTCAGCATAATTCAGGCAGGGTTCTGGGAGCTGAGGCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | TTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTaGCCAGTATCAAGGCTGGCGCAAGTGGCTGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LQFFHPSTHQCY*PVSRLAQVAAF Trigger: AAAAGCAGCCACTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | CTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTaGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LQPTNATAQYQG*RKWLLFKETRA Trigger: AGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | TCCAAGAATACAGTGCTTTTTGCTGGATCCAGGTACTaGGTATTAACAGTCCTGAAGGGGGAAGCCCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: SKNTVLFAGSRY*VLTVLKGEALT Trigger: GGTCAGGGCTTCCCCCTTCAGGACTGTTAATACCCAGTACCTGGATCCAGCAAAAAGCACTGTATTCTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR TCA 72 bp | TCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTaGCTAACTAACGCTTTCTGTAATCAGTGGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLAGRSQKSNNP*LTNAFCNQWTV Trigger: CACTGTCCACTGATTACAGAAAGCGTTAGTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | GAAACTGCTGTAGAGCTAACGTGTACCATCTTGAAATaGATCTCAAGACGAGCATCCAGCAAGGCTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ETAVELTCTILK*ISRRASSKAQS Trigger: GCTCTGAGCCTTGCTGGATGCTCGTCTTGAGATGCATTTCAAGATGGTACACGTTAGCTCTACAGCAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | TTACCATCTGAGAACACACAATCCAGAGAAACAATGTaGCCAGACCCAGAGTCTGAGGCCTTGGCAGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPSENTQSRETM*PDPESEALAVK Trigger: CTTAACTGCCAAGGCCTCAGACTCTGGGTCTGGGCACATTGTTTCTCTGGATTGTGTGTTCTCAGATGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | CTGTCGCAGTCTGGCAGAGGATGTGAATGTGTACAATaGCAATGGCAGTCTCTAAACCAACGCATTCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LSQSGRGCECVQ*QWQSLNQRILW Trigger: CCAAAGAATGCGTTGGTTTAGAGACTGCCATTGCCATTGTACACATTCACATCCTCTGCCAGACTGCGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | GGGTTGCTGAACCTCAGAAAGCAATGCGGACCTAGATaGTTGCTGGGCTTTTACTGCTTTTGTGTCAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GLLNLRKQCGPR*LLGFYCFCVKE Trigger: TTCTTTGACACAAAAGCAGTAAAAGCCCAGCAAGCATCTAGGTCCGCATTGCTTTCTGAGGTTCAGCAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | GGCTTAAGAGTGGTTCACTGTCCAAGCCTCCTGCCTTaGCATGTCGTCTTTTGCACATATGTTTGTTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLRVVHCPSLLP*HVVFCTYVCFH Trigger: GTGAAAACAAACATATGTGCAAAAGACGACATGGCAAGGCAGGAGGCTTGGACAGTGAACCACTCTTAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | GCATCCAGAAAGGACCAGTTCACTCACTTTTCCAGATaGACTTTATTCCTATGCCGATGGTCTGGTACTATG | + |
|
Preference number: 3 (lower is better) Translates to: ASRKDQFTHFSR*TLFLCRWSGTM Trigger: CATAGTACCAGACCATCGGCATAGGAATAAAGTGCATCTGGAAAAGTGAGTGAACTGGTCCTTTCTGGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | CCTACTCCTACAAAGAATCTCCTTTGTGCCCTTGTTTaGACCAACAAAGATGGTTCCAGAACTCTCATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PTPTKNLLCALV*TNKDGSRTLMH Trigger: GTGCATGAGAGTTCTGGAACCATCTTTGTTGGTGCAAACAAGGGCACAAAGGAGATTCTTTGTAGGAGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | CACTGTCCAAGCCTCCTGCCTTGCCATGTCGTCTTTTaGACATATGTTTGTTTTCACATCATCCACTATAGG | + |
|
Preference number: 3 (lower is better) Translates to: HCPSLLPCHVVF*TYVCFHIIHYR Trigger: CCTATAGTGGATGATGTGAAAACAAACATATGTGCAAAAGACGACATGGCAAGGCAGGAGGCTTGGACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | CAGTTCACTCACTTTTCCAGATGCACTTTATTCCTATaGCGATGGTCTGGTACTATGAGCAAGCTGACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QFTHFSRCTLFL*RWSGTMSKLTS Trigger: AGAAGTCAGCTTGCTCATAGTACCAGACCATCGGCATAGGAATAAAGTGCATCTGGAAAAGTGAGTGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | AAGTGTGGTCTCAGTAGCATCCCTTCATTTCTGACCTaGATTACTGTTGTCACGTTTCCAAATGCAGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KCGLSSIPSFLT*ITVVTFPNAVS Trigger: TGACACTGCATTTGGAAACGTGACAACAGTAATCCAGGTCAGAAATGAAGGGATGCTACTGAGACCACACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | CAGTCTGGCAGAGGATGTGAATGTGTACAATGGCAATaGCAGTCTCTAAACCAACGCATTCTTTGGAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QSGRGCECVQWQ*QSLNQRILWKN Trigger: GTTTTTCCAAAGAATGCGTTGGTTTAGAGACTGCCATTGCCATTGTACACATTCACATCCTCTGCCAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CCA 72 bp | CATCATGCCTGTAGCTCACAGGAGGCAGCTACTGGATaGCTTTTTCTAATCCCTATTTATCACTGTGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: HHACSSQEAATG*LFLIPIYHCAN Trigger: ATTTGCACAGTGATAAATAGGGATTAGAAAAAGCCATCCAGTAGCTGCCTCCTGTGAGCTACAGGCATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATCAAGCACGTCCCTCAGGTGTTTTGTTATAGAATACAAAACAGCCTTAAACGGGAAAGCCACAGGCTaGTCTAGTGTCTCCATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SSSTSLRCFVIEYKTALNGKATG*SSVSML Trigger: TAACATGGAGACACTAGACAAGCCTGTGGCTTTCCC...GTTTAAGGCTGTTTTGTATTCTATAACAAAACACCTGAGGGACGTGCTTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | ATGATAACTGCCTACTCCTACAAAGAATCTCCTTTGTaGCCTTGTTTGCACCAACAAAGATGGTTCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: MITAYSYKESPL*PCLHQQRWFQN Trigger: GTTCTGGAACCATCTTTGTTGGTGCAAACAAGGGCACAAAGGAGATTCTTTGTAGGAGTAGGCAGTTATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR TCA 72 bp | AATGGTGTGACCCTTCCTCTAAAACTGAAATCCTTGTaGACTGTTGATGAGAATGGAAACTCGGTTACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NGVTLPLKLKSL*TVDENGNSVTV Trigger: CACAGTAACCGAGTTTCCATTCTCATCAACAGTTCACAAGGATTTCAGTTTTAGAGGAAGGGTCACACCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR GCA 72 bp | TTGTTTGCACCAACAAAGATGGTTCCAGAACTCTCATaGACTTACCATCTGAGAACACACAATCCAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LFAPTKMVPELS*TYHLRTHNPEK Trigger: TTTCTCTGGATTGTGTGTTCTCAGATGGTAAGTGCATGAGAGTTCTGGAACCATCTTTGTTGGTGCAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTGGGCCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATGCATGTGCTGGCGGGTaGTGCCACTCCAGCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPGPHLIRWKSQETYLSNACAGG*CHSSGC Trigger: GCACCCGCTGGAGTGGCATCACCCGCCAGCACATGC...ATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGGCCCAGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCAACTCCCCCTCCAGGCCTCTCTGTGTAAGCGCACCTCCTGTCCTCTCCGATGGGCCCAGGTCTTaGAGCTTCTCTGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGNSPSRPLCVSAPPVLSDGPRS*SFSGDR Trigger: TCTGTCCCCAGAGAAGCTCCAAGACCTGGGCCCATC...GGAGAGGACAGGAGGTGCGCTTACACAGAGAGGCCTGGAGGGGGAGTTGCCAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTTCCCTGGCCTCACACACCTTCAGCCCAGCTTGAGCATCCAGAAAGGACGGGCCATGAATCGCTaGTGCTGCCGGCTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WAFPGLTHLQPSLSIQKGRAMNR*CCRLLL Trigger: GAGGAGAAGCCGGCAGCACCAGCGATTCATGGCCCG...TCCTTTCTGGATGCTCAAGCTGGGCTGAAGGTGTGTGAGGCCAGGGAAGGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | GGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCAGGAGACCTGGCCCTGGTaGCGTGCTCAACAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GASGCFLRKQELTLVPGQETWPW*RAQQLL Trigger: CAGGAGCTGTTGAGCACGGCACCAGGGCCAGGTCTC...CTGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGGGCCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATCTGGCCTTGGGACGTTaGCTCCTGCTGTCCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPGPHLIRWKSQETYLSNLALGR*LLLSEA Trigger: GGCTTCGGACAGCAGGAGGCAACGTCCCAAGGCCAG...ATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGGCCCAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | GGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCAGGCAGAGCTGGCCACTTaGTGCTCCCACTGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GASGCFLRKQELTLVPGQAELAT*CSHCTS Trigger: GGAGGTGCAGTGGGAGCAGCAAGTGGCCAGCTCTGC...CTGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCTGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCGGGCCTGGGCAGAGCTaGCCACTTGCTGCTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QGWRKWLLFKETRAHPGAGPGQS*PLAAPT Trigger: AGTGGGAGCAGCAAGTGGCCAGCTCTGCCCAGGCCC...GGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTGACTAACAACAGCTCCTGCTCCTaGAGCAAGGCCTTGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPPFPGREEPEIKQSVTNNSSCS*SKALRA Trigger: GGCCCGCAAGGCCTTGCTTCAGGAGCAGGAGCTGTT...GTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCGCATGTGCTGGCGGGTaGTGCCACTCCAGCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQMQCQEADVEIEAGSKTACAGG*CHSSGC Trigger: GCACCCGCTGGAGTGGCATCACCCGCCAGCACATGC...GGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCAGGCCTTGCGGGCCATaGATCGCTGGTGCTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQMQCQEADVEIEAGSKTRPCGP*IAGAAG Trigger: GCCGGCAGCACCAGCGATTCATGGCCCGCAAGGCCT...GGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCTGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCCTGGCCTTGGGACGTTaGCTCCTGCTGTCCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGWRKWLLFKETRAHPGALALGR*LLLSEA Trigger: GGCTTCGGACAGCAGGAGGCAACGTCCCAAGGCCAG...GGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACACATCCCATCAGCTGCTCACCCATCATGCCTGTAGCTCACAGGAGGCACTGGCCTTGGGACGTTaGCTCCTGCTGTCCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KDTSHQLLTHHACSSQEALALGR*LLLSEA Trigger: GGCTTCGGACAGCAGGAGGCAACGTCCCAAGGCCAG...TGCCTCCTGTGAGCTACAGGCATGATGGGTGAGCAGCTGATGGGATGTGTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGGGCCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATTCATTGTGCAGTGCGTaGCCCACCACCACCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CPGPHLIRWKSQETYLSNSLCSA*PTTTLP Trigger: GGGCAAGGTGGTGGTGGGGCACGCACTGCACAATGA...ATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGGCCCAGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCTGGGCCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATGCCTGGAAGTCATTGTaGAGTGCGTGCCCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: CPGPHLIRWKSQETYLSNAWKSL*SACPTT Trigger: GGTGGTGGGGCACGCACTGCACAATGACTTCCAGGC...ATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGGCCCAGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | GGGAACAGCAGCTTTACCCTCGGATCCTGTCAGGCTCCTTTTCCAGATGACGCCCAGAAGGCAGAGACCTaGCCCTGGTGCCGTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GNSSFTLGSCQAPFPDDAQKAET*PWCRAQ Trigger: TTGAGCACGGCACCAGGGCCAGGTCTCTGCCTTCTG...GGCGTCATCTGGAAAAGGAGCCTGACAGGATCCGAGGGTAAAGCTGCTGTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTGACTAACGTCTGGCTCCGAGGGTaGACGTACTTCAGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPPFPGREEPEIKQSVTNVWLRG*TYFRAW Trigger: CCAGGCCCTGAAGTACGTCCACCCTCGGAGCCAGAC...GTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTGACTAACGTGGTATCCCGGGTCTaGCTCCGAGGGTGGACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QPPFPGREEPEIKQSVTNVVSRV*LRGWTY Trigger: GTACGTCCACCCTCGGAGCCAGACCCGGGATACCAC...GTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCCCAGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAAACAGCTCCTGCTCCTaGAGCAAGGCCTTGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASPSLQFFHPSTHQCYCPNSSCS*SKALRA Trigger: GGCCCGCAAGGCCTTGCTTCAGGAGCAGGAGCTGTT...TGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCTGGGAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTGACTAACGGGAGCTGGGCTGGCTaGGCAGGTTTGGGACATAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPPFPGREEPEIKQSVTNGSWAG*AGLGHK Trigger: CTTATGTCCCAAACCTGCTCAGCCAGCCCAGCTCCC...GTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCCCAGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCACTGGCCCTGGTGCCGTaGTCAACAGCTCCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPSLQFFHPSTHQCYCPLALVP*STAPAP Trigger: AGGAGCAGGAGCTGTTGAGCACGGCACCAGGGCCAG...TGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCTGGGAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGTGCACAGGCCATTGCTaGCGGACCTGGCCTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFTLQPTNATAQYQGWRKCTGHC*RTWPWD Trigger: GTCCCAAGGCCAGGTCCGGCAGCAATGGCCTGTGCA...CTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTGACTAACTCATTGTGCAGTGCGTaGCCCACCACCACCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QPPFPGREEPEIKQSVTNSLCSA*PTTTLP Trigger: GGGCAAGGTGGTGGTGGGGCACGCACTGCACAATGA...GTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCTGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCGCCTGGAAGTCATTGTaGAGTGCGTGCCCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: QGWRKWLLFKETRAHPGAAWKSL*SACPTT Trigger: GGTGGTGGGGCACGCACTGCACAATGACTTCCAGGC...GGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGGCAGAGCTGGCCACTTaGTGCTCCCACTGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFTLQPTNATAQYQGWRKAELAT*CSHCTS Trigger: GGAGGTGCAGTGGGAGCAGCAAGTGGCCAGCTCTGC...CTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCTGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCGCCTTGTGCATGTGCTaGCGGGTGATGCCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGWRKWLLFKETRAHPGAALCMC*RVMPLQ Trigger: CTGGAGTGGCATCACCCGCCAGCACATGCACAAGGC...GGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTAAGAGTGGTTCACTGTCCAAGCCTCCTGCCTTGCCATGTCGTCTTTTGCGTGGTATCCCGGGTCTaGCTCCGAGGGTGGACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLRVVHCPSLLPCHVVFCVVSRV*LRGWTY Trigger: GTACGTCCACCCTCGGAGCCAGACCCGGGATACCAC...GCAAAAGACGACATGGCAAGGCAGGAGGCTTGGACAGTGAACCACTCTTAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCTCTGAAGGGCCTGGGCAGAGCTaGCCACTTGCTGCTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: MQCQEADVEIEAGSKTSEGPGQS*PLAAPT Trigger: AGTGGGAGCAGCAAGTGGCCAGCTCTGCCCAGGCCC...TTCAGAGGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGCGGGCCATGAATCGCTaGTGCTGCCGGCTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFTLQPTNATAQYQGWRKRAMNR*CCRLLL Trigger: GAGGAGAAGCCGGCAGCACCAGCGATTCATGGCCCG...CTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | CCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATAGCTGCTCAGGGAGCTGGGCTGGCTaGGCAGGTTTGGGACATAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHLIRWKSQETYLSNSCSGSWAG*AGLGHK Trigger: CTTATGTCCCAAACCTGCTCAGCCAGCCCAGCTCCC...TGAGCAGCTATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTAAGAGTGGTTCACTGTCCAAGCCTCCTGCCTTGCCATGTCGTCTTTTGCGGGAGCTGGGCTGGCTaGGCAGGTTTGGGACATAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLRVVHCPSLLPCHVVFCGSWAG*AGLGHK Trigger: CTTATGTCCCAAACCTGCTCAGCCAGCCCAGCTCCC...GCAAAAGACGACATGGCAAGGCAGGAGGCTTGGACAGTGAACCACTCTTAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCCCAGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGGCATCTTCCACAGATaGGTGGCCCTGGTGACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPSLQFFHPSTHQCYCPGIFHR*VALVTD Trigger: GTCGGTCACCAGGGCCACTCATCTGTGGAAGATGCC...TGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCTGGGAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCGAGACCTGGCCCTGGTaGCGTGCTCAACAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQMQCQEADVEIEAGSKTETWPW*RAQQLL Trigger: CAGGAGCTGTTGAGCACGGCACCAGGGCCAGGTCTC...GGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | CGTTTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGTGCACAGGCCATTGCTaGCGGACCTGGCCTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RFQMQCQEADVEIEAGSKCTGHC*RTWPWD Trigger: GTCCCAAGGCCAGGTCCGGCAGCAATGGCCTGTGCA...CTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | GGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCAGATAGCCTTGTGCATGTaGTGGCGGGTGATGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GASGCFLRKQELTLVPGQIALCM*WRVMPL Trigger: GAGTGGCATCACCCGCCAGCACATGCACAAGGCTAT...CTGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCAGATGGGCCCAGGTCTTaGAGCTTCTCTGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WRKWLLFKETRAHPGARPDGPRS*SFSGDR Trigger: TCTGTCCCCAGAGAAGCTCCAAGACCTGGGCCCATC...TGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGTGGGATGGGCCCAGGTCTTaGAGCTTCTCTGGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTLQPTNATAQYQGWRKWDGPRS*SFSGDR Trigger: TCTGTCCCCAGAGAAGCTCCAAGACCTGGGCCCATC...CCACTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCGTCTGGCTCCGAGGGTaGACGTACTTCAGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQMQCQEADVEIEAGSKTVWLRG*TYFRAW Trigger: CCAGGCCCTGAAGTACGTCCACCCTCGGAGCCAGAC...GGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAACCAGGCCTGAACAGAGCCCCATCCTGTTTATCACTAGGATACACGGGCCTGGGCAGAGCTaGCCACTTGCTGCTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CSETRPEQSPILFITRIHGPGQS*PLAAPT Trigger: AGTGGGAGCAGCAAGTGGCCAGCTCTGCCCAGGCCC...GTGTATCCTAGTGATAAACAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CACCTTCCTAATGCTGCAACCCTTTATTACAGTTCCTCATGCTGTGGAGACCCCTCCTCAGCAGGGGCCTaGGCAGAGCTGGCCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLPNAATLYYSSSCCGDPSSAGA*AELATC Trigger: GCAAGTGGCCAGCTCTGCCCAGGCCCCTGCTGAGGA...GGGGTCTCCACAGCATGAGGAACTGTAATAAAGGGTTGCAGCATTAGGAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCATCCTCGGGCCAGTACTaGTCGTCCATGTACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WRKWLLFKETRAHPGARPSSGQY*SSMYCS Trigger: GGAGCAGTACATGGACGACCAGTACTGGCCCGAGGA...TGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTGACTAACTCCTCGGGCCAGTACTaGTCGTCCATGTACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPPFPGREEPEIKQSVTNSSGQY*SSMYCS Trigger: GGAGCAGTACATGGACGACCAGTACTGGCCCGAGGA...GTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | CCACAAGCAGTCATAGTGCGCCTTCCATTTGCCCTCTaGTGGTTCCTCAGAGCTGGGCCTCAGCTCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQAVIVRLPFAL*WFLRAGPQLPE Trigger: TTCTGGGAGCTGAGGCCCAGCTCTGAGGAACCACAAGAGGGCAAATGGAAGGCGCACTATGACTGCTTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | CCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATAGCTGCTCATGCCACTCCAGCGGGTaGGATAGTCCACAATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLIRWKSQETYLSNSCSCHSSG*DSPQWA Trigger: TGCCCATTGTGGACTATCGCACCCGCTGGAGTGGCA...TGAGCAGCTATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTAAGAGTGGTTCACTGTCCAAGCCTCCTGCCTTGCCATGTCGTCTTTTGCTGCCACTCCAGCGGGTaGGATAGTCCACAATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRVVHCPSLLPCHVVFCCHSSG*DSPQWA Trigger: TGCCCATTGTGGACTATCGCACCCGCTGGAGTGGCA...GCAAAAGACGACATGGCAAGGCAGGAGGCTTGGACAGTGAACCACTCTTAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCTCTGAAGCCTTGTGCATGTGCTaGCGGGTGATGCCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MQCQEADVEIEAGSKTSEALCMC*RVMPLQ Trigger: CTGGAGTGGCATCACCCGCCAGCACATGCACAAGGC...TTCAGAGGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CACCTTCCTAATGCTGCAACCCTTTATTACAGTTCCTCATGCTGTGGAGACCCCGTGGTATCCCGGGTCTaGCTCCGAGGGTGGACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HLPNAATLYYSSSCCGDPVVSRV*LRGWTY Trigger: GTACGTCCACCCTCGGAGCCAGACCCGGGATACCAC...GGGGTCTCCACAGCATGAGGAACTGTAATAAAGGGTTGCAGCATTAGGAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCTTTACCCTCGGATCCTGTCAGGCTCCTTTTCCAGATGACGCCACACGGTTTGGGACATAAGTaGTATCCCGGGTCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAALPSDPVRLLFQMTPHGLGHK*YPGSGS Trigger: GGAGCCAGACCCGGGATACCACTTATGTCCCAAACC...GTGTGGCGTCATCTGGAAAAGGAGCCTGACAGGATCCGAGGGTAAAGCTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGTGGTGCACCTCCACCAGCTaGTACAACTCCATGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FTLQPTNATAQYQGWRKWCTSTS*YNSMAV Trigger: GACAGCCATGGAGTTGTACCAGCTGGTGGAGGTGCA...CCACTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TCCACCTTCCTAATGCTGCAACCCTTTATTACAGTTCCTCATGCTGTGGAGACCTCCTCAGCAGGGGCCTaGGCAGAGCTGGCCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: STFLMLQPFITVPHAVETSSAGA*AELATC Trigger: GCAAGTGGCCAGCTCTGCCCAGGCCCCTGCTGAGGA...GGTCTCCACAGCATGAGGAACTGTAATAAAGGGTTGCAGCATTAGGAAGGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | TGGGCCTTCCCTGGCCTCACACACCTTCAGCCCAGCTaGAGCATCCAGAAAGGACCAGTTCACTCACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WAFPGLTHLQPS*SIQKGPVHSLF Trigger: GAAAAGTGAGTGAACTGGTCCTTTCTGGATGCTCAAGCTGGGCTGAAGGTGTGTGAGGCCAGGGAAGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTGTCAGGAATGATGAGAACAGCTCCTGCTCCTaGAGCAAGGCCTTGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKATGLSSVSMLSVRNDENSSCS*SKALRA Trigger: GGCCCGCAAGGCCTTGCTTCAGGAGCAGGAGCTGTT...CTCATCATTCCTGACACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | ATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCTCTGAATCCTTCTGGGCCACCTaGAAGGGGATAGCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MQCQEADVEIEAGSKTSESFWAT*KGIALC Trigger: GCACAAGGCTATCCCCTTTCAGGTGGCCCAGAAGGA...TTCAGAGGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | TATCACTGTGCAAATGGCTTAAGAGTGGTTCACTGTCCAAGCCTCCTGCCTTGCGGCATCTTCCACAGATaGGTGGCCCTGGTGACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: YHCANGLRVVHCPSLLPCGIFHR*VALVTD Trigger: GTCGGTCACCAGGGCCACTCATCTGTGGAAGATGCC...GCAAGGCAGGAGGCTTGGACAGTGAACCACTCTTAAGCCATTTGCACAGTGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | CGTTTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACTTGCTGCTCCCACTaGACCTCCACCAGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RFQMQCQEADVEIEAGSKTCCSH*TSTSWY Trigger: GTACCAGCTGGTGGAGGTGCAGTGGGAGCAGCAAGT...CTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | GGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCAGGCCAGGTCTTGGAGCTTCTCTaGGGACAGACTTTTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GASGCFLRKQELTLVPGQVLELL*GQTFCC Trigger: GCAGCAAAAAGTCTGTCCCCAGAGAAGCTCCAAGAC...CTGGCCTGGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGTGGACGTACTTCAGGGCCTaGAAGTCATTGTGCAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FTLQPTNATAQYQGWRKWTYFRA*KSLCSA Trigger: CGCACTGCACAATGACTTCCAGGCCCTGAAGTACGT...CCACTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCCCCTTTCCCTGGCAGGGAGGAGCCAGAAATCAAACAATCCGTGACTAACACGTACTTCAGGGCCTaGAAGTCATTGTGCAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QPPFPGREEPEIKQSVTNTYFRA*KSLCSA Trigger: CGCACTGCACAATGACTTCCAGGCCCTGAAGTACGT...GTTAGTCACGGATTGTTTGATTTCTGGCTCCTCCCTGCCAGGGAAAGGGGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATAGCTGCTCAGGTTTGGGACATAAGTaGTATCCCGGGTCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PHLIRWKSQETYLSNSCSGLGHK*YPGSGS Trigger: GGAGCCAGACCCGGGATACCACTTATGTCCCAAACC...TGAGCAGCTATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATAGCTGCTCATGCACCTCCACCAGCTaGTACAACTCCATGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PHLIRWKSQETYLSNSCSCTSTS*YNSMAV Trigger: GACAGCCATGGAGTTGTACCAGCTGGTGGAGGTGCA...TGAGCAGCTATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | CACCTTCCTAATGCTGCAACCCTTTATTACAGTTCCTCATGCTGTGGAGACCCCTCCTTCTGGGCCACCTaGAAGGGGATAGCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLPNAATLYYSSSCCGDPSFWAT*KGIALC Trigger: GCACAAGGCTATCCCCTTTCAGGTGGCCCAGAAGGA...GGGGTCTCCACAGCATGAGGAACTGTAATAAAGGGTTGCAGCATTAGGAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCACTTTACACTGGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTCTGGCCCTGGTGCCGTaGTCAACAGCTCCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPLYTGKATGLSSVSMLSLALVP*STAPAP Trigger: AGGAGCAGGAGCTGTTGAGCACGGCACCAGGGCCAG...ACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCCAGTGTAAAGTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTCCAAGCCTCCTGCCTTGCCATGTCGTCTTTTGCACATATGTTTGTTTTCTGCACAGGCCATTGCTaGCGGACCTGGCCTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TVQASCLAMSSFAHMFVFCTGHC*RTWPWD Trigger: GTCCCAAGGCCAGGTCCGGCAGCAATGGCCTGTGCA...GAAAACAAACATATGTGCAAAAGACGACATGGCAAGGCAGGAGGCTTGGACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGAAACCAGGCCTGAACAGAGCCCCATCCTGTTTATCACTAGGATACACTGCCACTCCAGCGGGTaGGATAGTCCACAATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSETRPEQSPILFITRIHCHSSG*DSPQWA Trigger: TGCCCATTGTGGACTATCGCACCCGCTGGAGTGGCA...GTGTATCCTAGTGATAAACAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCTCTGAAATAGCCTTGTGCATGTaGTGGCGGGTGATGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: MQCQEADVEIEAGSKTSEIALCM*WRVMPL Trigger: GAGTGGCATCACCCGCCAGCACATGCACAAGGCTAT...TTCAGAGGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCCTGGCATCCATGGACATTTCGGGTCAGTTCTCCAGCATCCTGCTCTCATATAGCCTTGTGCATGTaGTGGCGGGTGATGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KSWHPWTFRVSSPASCSHIALCM*WRVMPL Trigger: GAGTGGCATCACCCGCCAGCACATGCACAAGGCTAT...ATGAGAGCAGGATGCTGGAGAACTGACCCGAAATGTCCATGGATGCCAGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCTCTGAAGAAGTCATTGTGCAGTaGGTGCCCCACCACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: MQCQEADVEIEAGSKTSEEVIVQ*VPHHHL Trigger: AAGGTGGTGGTGGGGCACGCACTGCACAATGACTTC...TTCAGAGGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TCCACCTTCCTAATGCTGCAACCCTTTATTACAGTTCCTCATGCTGTGGAGACCGCCTGGAAGTCATTGTaGAGTGCGTGCCCCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: STFLMLQPFITVPHAVETAWKSL*SACPTT Trigger: GGTGGTGGGGCACGCACTGCACAATGACTTCCAGGC...GGTCTCCACAGCATGAGGAACTGTAATAAAGGGTTGCAGCATTAGGAAGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | AATTGCCATGGCTGTGCTTTATCTAAGTCTTCATCAAGCACGTCCCTCAGGTGTGCAGAGCTGGCCACTTaGTGCTCCCACTGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NCHGCALSKSSSSTSLRCAELAT*CSHCTS Trigger: GGAGGTGCAGTGGGAGCAGCAAGTGGCCAGCTCTGC...ACACCTGAGGGACGTGCTTGATGAAGACTTAGATAAAGCACAGCCATGGCAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTGTCAGGAATGATGAGCAGAAGGCAGAGACCTaGCCCTGGTGCCGTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GKATGLSSVSMLSVRNDEQKAET*PWCRAQ Trigger: TTGAGCACGGCACCAGGGCCAGGTCTCTGCCTTCTG...CTCATCATTCCTGACACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCCCAGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAACGTACTTCAGGGCCTaGAAGTCATTGTGCAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ASPSLQFFHPSTHQCYCPTYFRA*KSLCSA Trigger: CGCACTGCACAATGACTTCCAGGCCCTGAAGTACGT...TGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCTGGGAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TGCACATATGTTTGTTTTCACATCATCCACTATAGGGGCCCTCAGCAAAGCCCTGTCTGGCTCCGAGGGTaGACGTACTTCAGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTYVCFHIIHYRGPQQSPVWLRG*TYFRAW Trigger: CCAGGCCCTGAAGTACGTCCACCCTCGGAGCCAGAC...AGGGCTTTGCTGAGGGCCCCTATAGTGGATGATGTGAAAACAAACATATGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | CTTGAAGGAGGAAATGTAAAGGGACACCGGGTGGGGTaGCTGAACCTCAGAAAGCAATGCGGACCTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LEGGNVKGHRVG*LNLRKQCGPRC Trigger: GCATCTAGGTCCGCATTGCTTTCTGAGGTTCAGCAACCCCACCCGGTGTCCCTTTACATTTCCTCCTTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | AGCATCCTGCTCTCATCCTTGATGATGCTCACTGTGTaGGAGTTTCCTTACGCTTCTGCCTTTGGGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SILLSSLMMLTV*EFPYASAFGDA Trigger: GGCGTCCCCAAAGGCAGAAGCGTAAGGAAACTCCAACACAGTGAGCATCATCAAGGATGAGAGCAGGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | ATAGGGGCCCTCAGCAAAGCCCTGCAGACCAGCACCTaGCTTTCCAATTGCCATGGCTGTGCTTTATCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: IGALSKALQTST*LSNCHGCALSK Trigger: CTTAGATAAAGCACAGCCATGGCAATTGGAAAGCAAGGTGCTGGTCTGCAGGGCTTTGCTGAGGGCCCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGTCCTTCTGGGCCACCTaGAAGGGGATAGCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLQFFHPSTHQCYCPVSRSFWAT*KGIALC Trigger: GCACAAGGCTATCCCCTTTCAGGTGGCCCAGAAGGA...CCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCACTTTACACTGGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTGGCATCTTCCACAGATaGGTGGCCCTGGTGACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPLYTGKATGLSSVSMLSGIFHR*VALVTD Trigger: GTCGGTCACCAGGGCCACTCATCTGTGGAAGATGCC...ACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCCAGTGTAAAGTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCACTTTACACTGGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTTCATTGTGCAGTGCGTaGCCCACCACCACCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPLYTGKATGLSSVSMLSSLCSA*PTTTLP Trigger: GGGCAAGGTGGTGGTGGGGCACGCACTGCACAATGA...ACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCCAGTGTAAAGTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGAAACCAGGCCTGAACAGAGCCCCATCCTGTTTATCACTAGGATACACGAAGTCATTGTGCAGTaGGTGCCCCACCACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSETRPEQSPILFITRIHEVIVQ*VPHHHL Trigger: AAGGTGGTGGTGGGGCACGCACTGCACAATGACTTC...GTGTATCCTAGTGATAAACAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCTCTGAAACCTGGATCTTCTTGTaGAGCAGGTTCAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MQCQEADVEIEAGSKTSETWIFL*SRFKAR Trigger: CCTGGCCTTGAACCTGCTGCACAAGAAGATCCAGGT...TTCAGAGGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | CGTTTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCTGGATCTTCTTGTaGAGCAGGTTCAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFQMQCQEADVEIEAGSKTWIFL*SRFKAR Trigger: CCTGGCCTTGAACCTGCTGCACAAGAAGATCCAGGT...CTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTGTCAGGAATGATGAGACTTGCTGCTCCCACTaGACCTCCACCAGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKATGLSSVSMLSVRNDETCCSH*TSTSWY Trigger: GTACCAGCTGGTGGAGGTGCAGTGGGAGCAGCAAGT...CTCATCATTCCTGACACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCACTTTACACTGGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTCAGAAGGCAGAGACCTaGCCCTGGTGCCGTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPLYTGKATGLSSVSMLSQKAET*PWCRAQ Trigger: TTGAGCACGGCACCAGGGCCAGGTCTCTGCCTTCTG...ACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCCAGTGTAAAGTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAACCAGGCCTGAACAGAGCCCCATCCTGTTTATCACTAGGATACACTGCACCTCCACCAGCTaGTACAACTCCATGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSETRPEQSPILFITRIHCTSTS*YNSMAV Trigger: GACAGCCATGGAGTTGTACCAGCTGGTGGAGGTGCA...GTGTATCCTAGTGATAAACAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGTCCTCGGGCCAGTACTaGTCGTCCATGTACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLQFFHPSTHQCYCPVSRSSGQY*SSMYCS Trigger: GGAGCAGTACATGGACGACCAGTACTGGCCCGAGGA...CCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTGTCAGGAATGATGAGGAAGTCATTGTGCAGTaGGTGCCCCACCACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKATGLSSVSMLSVRNDEEVIVQ*VPHHHL Trigger: AAGGTGGTGGTGGGGCACGCACTGCACAATGACTTC...CTCATCATTCCTGACACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCACTTTACACTGGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTACTTGCTGCTCCCACTaGACCTCCACCAGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FPLYTGKATGLSSVSMLSTCCSH*TSTSWY Trigger: GTACCAGCTGGTGGAGGTGCAGTGGGAGCAGCAAGT...ACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCCAGTGTAAAGTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTGTCAGGAATGATGAGGGTTTGGGACATAAGTaGTATCCCGGGTCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKATGLSSVSMLSVRNDEGLGHK*YPGSGS Trigger: GGAGCCAGACCCGGGATACCACTTATGTCCCAAACC...CTCATCATTCCTGACACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | AGAGAAACAATGTGCCCAGACCCAGAGTCTGAGGCCTaGGCAGTTAAGGGCAAGCGTTCAGTCCTAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RETMCPDPESEA*AVKGKRSVLST Trigger: TGTACTTAGGACTGAACGCTTGCCCTTAACTGCCAAGGCCTCAGACTCTGGGTCTGGGCACATTGTTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGACCTGGATCTTCTTGTaGAGCAGGTTCAAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQFFHPSTHQCYCPVSRTWIFL*SRFKAR Trigger: CCTGGCCTTGAACCTGCTGCACAAGAAGATCCAGGT...CCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGAAACCAGGCCTGAACAGAGCCCCATCCTGTTTATCACTAGGATACACGTCTTGGAGCTTCTCTaGGGACAGACTTTTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSETRPEQSPILFITRIHVLELL*GQTFCC Trigger: GCAGCAAAAAGTCTGTCCCCAGAGAAGCTCCAAGAC...GTGTATCCTAGTGATAAACAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR TCA 90 bp | CTTGAAAACAGGGTAACATATCTGCATACCATATATACGGCTATCTTATTCACAAGGCCTTGCGGGCCATaGATCGCTGGTGCTGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LENRVTYLHTIYTAILFTRPCGP*IAGAAG Trigger: GCCGGCAGCACCAGCGATTCATGGCCCGCAAGGCCT...TGTGAATAAGATAGCCGTATATATGGTATGCAGATATGTTACCCTGTTTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | ATACACAAAGGACTTAGTCCTAAAGGGCAGTCTTACAGGAAAGACAGTATATGCGCCTTGTGCATGTGCTaGCGGGTGATGCCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHKGLSPKGQSYRKDSICALCMC*RVMPLQ Trigger: CTGGAGTGGCATCACCCGCCAGCACATGCACAAGGC...GCATATACTGTCTTTCCTGTAAGACTGCCCTTTAGGACTAAGTCCTTTGTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | CAGCTCCCAGAACCCTGCCTGAATTATGCTGAACGTTaGTCCAAGAATACAGTGCTTTTTGCTGGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLPEPCLNYAER*SKNTVLFAGSR Trigger: CCTGGATCCAGCAAAAAGCACTGTATTCTTGGACAAACGTTCAGCATAATTCAGGCAGGGTTCTGGGAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR CCA 90 bp | CTTGAAAACAGGGTAACATATCTGCATACCATATATACGGCTATCTTATTCACATCCTCAGCAGGGGCCTaGGCAGAGCTGGCCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LENRVTYLHTIYTAILFTSSAGA*AELATC Trigger: GCAAGTGGCCAGCTCTGCCCAGGCCCCTGCTGAGGA...TGTGAATAAGATAGCCGTATATATGGTATGCAGATATGTTACCCTGTTTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR GCA 90 bp | CTTGAAAACAGGGTAACATATCTGCATACCATATATACGGCTATCTTATTCACAGAGACCTGGCCCTGGTaGCGTGCTCAACAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LENRVTYLHTIYTAILFTETWPW*RAQQLL Trigger: CAGGAGCTGTTGAGCACGGCACCAGGGCCAGGTCTC...TGTGAATAAGATAGCCGTATATATGGTATGCAGATATGTTACCCTGTTTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | CCACTCTTCCCACTTTACACTGGGAAAGCCACAGGCTaGTCTAGTGTCTCCATGTTAAGTGTCAGGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLFPLYTGKATG*SSVSMLSVRND Trigger: ATCATTCCTGACACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCCAGTGTAAAGTGGGAAGAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | ACAATGGCAATGGCAGTCTCTAAACCAACGCATTCTTaGGAAAAACTCTGTACCACGGTGGGACCATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TMAMAVSKPTHS*EKLCTTVGPYS Trigger: GCTGTATGGTCCCACCGTGGTACAGAGTTTTTCCAAAGAATGCGTTGGTTTAGAGACTGCCATTGCCATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | AAGTCAGAAACTGCTGTAGAGCTAACGTGTACCATCTaGAAATGCATCTCAAGACGAGCATCCAGCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSETAVELTCTI*KCISRRASSKA Trigger: AGCCTTGCTGGATGCTCGTCTTGAGATGCATTTCAAGATGGTACACGTTAGCTCTACAGCAGTTTCTGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | GCCTACTCCTACAAAGAATCTCCTTTGTGCCCTTGTTaGCACCAACAAAGATGGTTCCAGAACTCTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: AYSYKESPLCPC*HQQRWFQNSHA Trigger: TGCATGAGAGTTCTGGAACCATCTTTGTTGGTGCAAACAAGGGCACAAAGGAGATTCTTTGTAGGAGTAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | TGGCTTAAGAGTGGTTCACTGTCCAAGCCTCCTGCCTaGCCATGTCGTCTTTTGCACATATGTTTGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WLKSGSLSKPPA*PCRLLHICLFS Trigger: TGAAAACAAACATATGTGCAAAAGACGACATGGCAAGGCAGGAGGCTTGGACAGTGAACCACTCTTAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| 3UTR CAA 72 bp | TTGCTGAACCTCAGAAAGCAATGCGGACCTAGATGCTaGCTGGGCTTTTACTGCTTTTGTGTCAAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLNLRKQCGPRC*LGFYCFCVKEK Trigger: TTTTTCTTTGACACAAAAGCAGTAAAAGCCCAGCAAGCATCTAGGTCCGCATTGCTTTCTGAGGTTCAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS CCA 90 bp | TTTGTCTCGGCCCCGGTGCTCTGGGTCAGGTCCTCGGGCCAGTACTaGTCGTCCATGTACTGCTCCACGTCAGTGCTGCTGTCGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FVSAPVLWVRSSGQY*SSMYCSTSVLLSGP Trigger: GGGGCCCGACAGCAGCACTGACGTGGAGCAGTACATGGACGACCAGTACTGGCCCGAGGACCTGACCCAGAGCACCGGGGCCGAGACAAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000205861.2 |
||
| CDS TCA 90 bp | AGGCAGAGACCTGGCCCTGGTGCCGTGCTCAACAGCTCCTGCTCCTaGAGCAAGGCCTTGCGGGCCATGAATCGCTGGTGCTGCCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQRPGPGAVLNSSCS*SKALRAMNRWCCRL Trigger: AAGCCGGCAGCACCAGCGATTCATGGCCCGCAAGGCCTTGCTTCAGGAGCAGGAGCTGTTGAGCACGGCACCAGGGCCAGGTCTCTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS TCA 90 bp | CGGACCTGGCCTTGGGACGTTGCCTCCTGCTGTCCGAAGCCTCTGTaGCCGCTGGCATCTGTGATGGTGAAGGCAGAAGGCAGAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTWPWDVASCCPKPL*PLASVMVKAEGRDL Trigger: CAGGTCTCTGCCTTCTGCCTTCACCATCACAGATGCCAGCGGTCACAGAGGCTTCGGACAGCAGGAGGCAACGTCCCAAGGCCAGGTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||
| CDS GCA 90 bp | CCTCTCCCTCCTGTCTATCTGGGCCTCCATTTGTCTCGGCCCCGGTaGTCTGGGTCAGGTCCTCGGGCCAGTACTGGTCGTCCATGTACT | + |
|
Preference number: 5 (lower is better) Translates to: PLPPVYLGLHLSRPR*SGSGPRASTGRPCT Trigger: AGTACATGGACGACCAGTACTGGCCCGAGGACCTGACCCAGAGCACCGGGGCCGAGACAAATGGAGGCCCAGATAGACAGGAGGGAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGCTGGCGCAAGTGGCTGCTTTTTAAGGAAACAAGAGCTCACCCTGGTGCCCTGCCGGACCTGGCCTaGGGACGTTGCCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGWRKWLLFKETRAHPGALPDLA*GRCLLL Trigger: CAGCAGGAGGCAACGTCCCAAGGCCAGGTCCGGCAG...GGCACCAGGGTGAGCTCTTGTTTCCTTAAAAAGCAGCCACTTGCGCCAGCCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS TCA 90 bp | CCGTGCTCAACAGCTCCTGCTCCTGAAGCAAGGCCTTGCGGGCCATaGATCGCTGGTGCTGCCGGCTTCTCCTCTTGTGTCTTCTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PCSTAPAPEARPCGP*IAGAAGFSSCVFSE Trigger: TTCGGAGAAGACACAAGAGGAGAAGCCGGCAGCACCAGCGATTCATGGCCCGCAAGGCCTTGCTTCAGGAGCAGGAGCTGTTGAGCACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS CCA 90 bp | AGAGACCCGAGTTCGGATAAGGGAGCTGGGCTGGCTGAGCAGGTTTaGGACATAAGTGGTATCCCGGGTCTGGCTCCGAGGGTGGACGTA | + |
|
Preference number: 5 (lower is better) Translates to: RDPSSDKGAGLAEQV*DISGIPGLAPRVDV Trigger: TACGTCCACCCTCGGAGCCAGACCCGGGATACCACTTATGTCCCAAACCTGCTCAGCCAGCCCAGCTCCCTTATCCGAACTCGGGTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGCTGGCGCAAGAGGGCCTGGAAGTCATaGTGCAGTGCGTGCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SFTLQPTNATAQYQGWRKRAWKS*CSACPT Trigger: GGTGGGGCACGCACTGCACAATGACTTCCAGGCCCT...CTTGCGCCAGCCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGGGCCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATCCGACCTGGATCTTCTaGTGCAGCAGGTTCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CPGPHLIRWKSQETYLSNPTWIF*CSRFKA Trigger: GGCCTTGAACCTGCTGCACAAGAAGATCCAGGTCGG...ATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGGCCCAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | AATCCAGAGAAACAATGTGCCCAGACCCAGAGTCTGAGGCCTTGGCAGTTAAGGAGGGCCTGGAAGTCATaGTGCAGTGCGTGCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: NPEKQCAQTQSLRPWQLRRAWKS*CSACPT Trigger: GGTGGGGCACGCACTGCACAATGACTTCCAGGCCCT...CCTTAACTGCCAAGGCCTCAGACTCTGGGTCTGGGCACATTGTTTCTCTGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS TCA 90 bp | CACCAGCTGGTACAACTCCATGGCTGTCATGGCATCTTCCACAGATaGGTGGCCCTGGTGACCGACCTGGATCTTCTTGTGCAGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HQLVQLHGCHGIFHR*VALVTDLDLLVQQV Trigger: AACCTGCTGCACAAGAAGATCCAGGTCGGTCACCAGGGCCACTCATCTGTGGAAGATGCCATGACAGCCATGGAGTTGTACCAGCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCACTTTACACTGGGAAAGCCACAGGCTTGTCTAGTGTCTCCATGTTAAGTCTGCCGGACCTGGCCTaGGGACGTTGCCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPLYTGKATGLSSVSMLSLPDLA*GRCLLL Trigger: CAGCAGGAGGCAACGTCCCAAGGCCAGGTCCGGCAG...ACTTAACATGGAGACACTAGACAAGCCTGTGGCTTTCCCAGTGTAAAGTGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | CCCCACCTCATCCGATGGAAAAGCCAAGAGACCTACCTGAGCAATAGCTGCTCATGCCCCACCACCACCTaGCCCTTCAACAGCTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHLIRWKSQETYLSNSCSCPTTT*PFNSLR Trigger: CCTTAAGCTGTTGAAGGGCAAGGTGGTGGTGGGGCA...TGAGCAGCTATTGCTCAGGTAGGTCTCTTGGCTTTTCCATCGGATGAGGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | GCAATAGCTGCTCAGAAACCAGGCCTGAACAGAGCCCCATCCTGTTTATCACTAAGGGCCTGGAAGTCATaGTGCAGTGCGTGCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AIAAQKPGLNRAPSCLSLRAWKS*CSACPT Trigger: GGTGGGGCACGCACTGCACAATGACTTCCAGGCCCT...TAGTGATAAACAGGATGGGGCTCTGTTCAGGCCTGGTTTCTGAGCAGCTATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCTCCCAGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCACCGACCTGGATCTTCTaGTGCAGCAGGTTCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASPSLQFFHPSTHQCYCPPTWIF*CSRFKA Trigger: GGCCTTGAACCTGCTGCACAAGAAGATCCAGGTCGG...TGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCTGGGAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS CCA 90 bp | CACCATCTCACAGTCAATGGCCACACACTTGATGGGCCCAGGTCTTaGAGCTTCTCTGGGGACAGACTTTTTGCTGCACAGGCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HHLTVNGHTLDGPRS*SFSGDRLFAAQAIA Trigger: AGCAATGGCCTGTGCAGCAAAAAGTCTGTCCCCAGAGAAGCTCCAAGACCTGGGCCCATCAAGTGTGTGGCCATTGACTGTGAGATGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAAATGCAGTGTCAGGAGGCTGATGTGGAGATAGAAGCTGGCAGCAAGACCTGCCGGCTTCTCCTCTaGTGTCTTCTCCGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: FQMQCQEADVEIEAGSKTCRLLL*CLLRTT Trigger: TGTGGTTCGGAGAAGACACAAGAGGAGAAGCCGGCA...GGTCTTGCTGCCAGCTTCTATCTCCACATCAGCCTCCTGACACTGCATTTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | ACCATATATACGGCTATCTTATTCACAATAGCAAGAGAGGAAGTGACCGAACGTCTGCCGGACCTGGCCTaGGGACGTTGCCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TIYTAILFTIAREEVTERLPDLA*GRCLLL Trigger: CAGCAGGAGGCAACGTCCCAAGGCCAGGTCCGGCAG...ACGTTCGGTCACTTCCTCTCTTGCTATTGTGAATAAGATAGCCGTATATATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTACAGTTCTTTCACCCTTCAACCCACCAATGCTACTGCCCAGTATCAAGGTGCCCCACCACCACCTaGCCCTTCAACAGCTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQFFHPSTHQCYCPVSRCPTTT*PFNSLR Trigger: CCTTAAGCTGTTGAAGGGCAAGGTGGTGGTGGGGCA...CCTTGATACTGGGCAGTAGCATTGGTGGGTTGAAGGGTGAAAGAACTGTAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | AATTGCCATGGCTGTGCTTTATCTAAGTCTTCATCAAGCACGTCCCTCAGGTGTTGCCGGCTTCTCCTCTaGTGTCTTCTCCGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: NCHGCALSKSSSSTSLRCCRLLL*CLLRTT Trigger: TGTGGTTCGGAGAAGACACAAGAGGAGAAGCCGGCA...ACACCTGAGGGACGTGCTTGATGAAGACTTAGATAAAGCACAGCCATGGCAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS-3UTR CAA 90 bp | CTTGAAAACAGGGTAACATATCTGCATACCATATATACGGCTATCTTATTCACACCGACCTGGATCTTCTaGTGCAGCAGGTTCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LENRVTYLHTIYTAILFTPTWIF*CSRFKA Trigger: GGCCTTGAACCTGCTGCACAAGAAGATCCAGGTCGG...TGTGAATAAGATAGCCGTATATATGGTATGCAGATATGTTACCCTGTTTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107425.8 |
||
| CDS TCA 72 bp | CCTGGCCCTGGTGCCGTGCTCAACAGCTCCTGCTCCTaGAGCAAGGCCTTGCGGGCCATGAATCGCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGPGAVLNSSCS*SKALRAMNRWC Trigger: GCACCAGCGATTCATGGCCCGCAAGGCCTTGCTTCAGGAGCAGGAGCTGTTGAGCACGGCACCAGGGCCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS GCA 72 bp | GCCAGTACTGGTCGTCCATGTACTGCTCCACGTCAGTaGTGCTGTCGGGCCCCCTGTCCTCAGCAGGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASTGRPCTAPRQ*CCRAPCPQQGP Trigger: AGGCCCCTGCTGAGGACAGGGGGCCCGACAGCAGCACTGACGTGGAGCAGTACATGGACGACCAGTACTGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000205861.2 |
||
| CDS GCA 72 bp | GTCAGGTCCTCGGGCCAGTACTGGTCGTCCATGTACTaGTCCACGTCAGTGCTGCTGTCGGGCCCCCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VRSSGQYWSSMY*STSVLLSGPLS Trigger: GGACAGGGGGCCCGACAGCAGCACTGACGTGGAGCAGTACATGGACGACCAGTACTGGCCCGAGGACCTGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000205861.2 |
||
| CDS CCA 72 bp | GCCCCGGTGCTCTGGGTCAGGTCCTCGGGCCAGTACTaGTCGTCCATGTACTGCTCCACGTCAGTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APVLWVRSSGQY*SSMYCSTSVLL Trigger: CAGCAGCACTGACGTGGAGCAGTACATGGACGACCAGTACTGGCCCGAGGACCTGACCCAGAGCACCGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000205861.2 |
||
| CDS GCA 72 bp | CCTGTCTATCTGGGCCTCCATTTGTCTCGGCCCCGGTaGTCTGGGTCAGGTCCTCGGGCCAGTACTGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: PVYLGLHLSRPR*SGSGPRASTGR Trigger: ACGACCAGTACTGGCCCGAGGACCTGACCCAGAGCACCGGGGCCGAGACAAATGGAGGCCCAGATAGACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS TCA 72 bp | CCTTGGGACGTTGCCTCCTGCTGTCCGAAGCCTCTGTaGCCGCTGGCATCTGTGATGGTGAAGGCAGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PWDVASCCPKPL*PLASVMVKAEG Trigger: GCCTTCTGCCTTCACCATCACAGATGCCAGCGGTCACAGAGGCTTCGGACAGCAGGAGGCAACGTCCCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||
| CDS TCA 72 bp | ACAGCTCCTGCTCCTGAAGCAAGGCCTTGCGGGCCATaGATCGCTGGTGCTGCCGGCTTCTCCTCTTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TAPAPEARPCGP*IAGAAGFSSCV Trigger: GACACAAGAGGAGAAGCCGGCAGCACCAGCGATTCATGGCCCGCAAGGCCTTGCTTCAGGAGCAGGAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS GCA 72 bp | CTCTGGGGACAGACTTTTTGCTGCACAGGCCATTGCTaGCGGACCTGGCCTTGGGACGTTGCCTCCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LWGQTFCCTGHC*RTWPWDVASCC Trigger: ACAGCAGGAGGCAACGTCCCAAGGCCAGGTCCGGCAGCAATGGCCTGTGCAGCAAAAAGTCTGTCCCCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||
| CDS GCA 72 bp | GCCCAGGTCTTGGAGCTTCTCTGGGGACAGACTTTTTaGTGCACAGGCCATTGCTGCCGGACCTGGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AQVLELLWGQTF*CTGHCCRTWPW Trigger: CCAAGGCCAGGTCCGGCAGCAATGGCCTGTGCAGCAAAAAGTCTGTCCCCAGAGAAGCTCCAAGACCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||
| CDS CCA 72 bp | CAGACTTTTTGCTGCACAGGCCATTGCTGCCGGACCTaGCCTTGGGACGTTGCCTCCTGCTGTCCGAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QTFCCTGHCCRT*PWDVASCCPKP Trigger: AGGCTTCGGACAGCAGGAGGCAACGTCCCAAGGCCAGGTCCGGCAGCAATGGCCTGTGCAGCAAAAAGTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||
| CDS CAA 72 bp | TTTTTGCTGCACAGGCCATTGCTGCCGGACCTGGCCTaGGGACGTTGCCTCCTGCTGTCCGAAGCCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FLLHRPLLPDLA*GRCLLLSEASV Trigger: CACAGAGGCTTCGGACAGCAGGAGGCAACGTCCCAAGGCCAGGTCCGGCAGCAATGGCCTGTGCAGCAAAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||
| CDS CAA 72 bp | GGCCCAGGTCTTGGAGCTTCTCTGGGGACAGACTTTTaGCTGCACAGGCCATTGCTGCCGGACCTGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GPGLGASLGTDF*LHRPLLPDLAL Trigger: CAAGGCCAGGTCCGGCAGCAATGGCCTGTGCAGCAAAAAGTCTGTCCCCAGAGAAGCTCCAAGACCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||
| CDS CAA 90 bp | CACTTGATGGGCCCAGGTCTTGGAGCTTCTCTGGGGACAGACTTTTaGCTGCACAGGCCATTGCTGCCGGACCTGGCCTTGGGACGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: HLMGPGLGASLGTDF*LHRPLLPDLALGRC Trigger: GCAACGTCCCAAGGCCAGGTCCGGCAGCAATGGCCTGTGCAGCAAAAAGTCTGTCCCCAGAGAAGCTCCAAGACCTGGGCCCATCAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||
| CDS GCA 72 bp | CAGGTCTTGGAGCTTCTCTGGGGACAGACTTTTTGCTaGACAGGCCATTGCTGCCGGACCTGGCCTTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QVLELLWGQTFC*TGHCCRTWPWD Trigger: GTCCCAAGGCCAGGTCCGGCAGCAATGGCCTGTGCAGCAAAAAGTCTGTCCCCAGAGAAGCTCCAAGACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||
| CDS CCA 72 bp | AGTTCGGATAAGGGAGCTGGGCTGGCTGAGCAGGTTTaGGACATAAGTGGTATCCCGGGTCTGGCTCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSDKGAGLAEQV*DISGIPGLAPR Trigger: CCTCGGAGCCAGACCCGGGATACCACTTATGTCCCAAACCTGCTCAGCCAGCCCAGCTCCCTTATCCGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS CAA 90 bp | AAGGCCTTGCGGGCCATGAATCGCTGGTGCTGCCGGCTTCTCCTCTaGTGTCTTCTCCGAACCACATCCTTGGTATTCAGGCTGGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KALRAMNRWCCRLLL*CLLRTTSLVFRLVR Trigger: TCTCACCAGCCTGAATACCAAGGATGTGGTTCGGAGAAGACACAAGAGGAGAAGCCGGCAGCACCAGCGATTCATGGCCCGCAAGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS TCA 72 bp | CCCTTCAACAGCTTAAGGATCTCCTTCTGGGCCACCTaGAAGGGGATAGCCTTGTGCATGTGCTGGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PFNSLRISFWAT*KGIALCMCWRV Trigger: CACCCGCCAGCACATGCACAAGGCTATCCCCTTTCAGGTGGCCCAGAAGGAGATCCTTAAGCTGTTGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000205861.2 |
||
| CDS CCA 72 bp | CCGAACCACATCCTTGGTATTCAGGCTGGTGAGAGATaGACACTGAGTAGACTCGGGGACTTCCCCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PNHILGIQAGER*TLSRLGDFPCH Trigger: GTGGCAGGGGAAGTCCCCGAGTCTACTCAGTGTCCATCTCTCACCAGCCTGAATACCAAGGATGTGGTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000205882.2 |
||
| CDS CAA 72 bp | TGGAAGTCATTGTGCAGTGCGTGCCCCACCACCACCTaGCCCTTCAACAGCTTAAGGATCTCCTTCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WKSLCSACPTTT*PFNSLRISFWA Trigger: GGCCCAGAAGGAGATCCTTAAGCTGTTGAAGGGCAAGGTGGTGGTGGGGCACGCACTGCACAATGACTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000205861.2 |
||
| CDS CAA 72 bp | CGGGCCATGAATCGCTGGTGCTGCCGGCTTCTCCTCTaGTGTCTTCTCCGAACCACATCCTTGGTATTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RAMNRWCCRLLL*CLLRTTSLVFR Trigger: CCTGAATACCAAGGATGTGGTTCGGAGAAGACACAAGAGGAGAAGCCGGCAGCACCAGCGATTCATGGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS TCA 72 bp | GCTGTCATGGCATCTTCCACAGATGAGTGGCCCTGGTaGCCGACCTGGATCTTCTTGTGCAGCAGGTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: AVMASSTDEWPW*PTWIFLCSRFK Trigger: CTTGAACCTGCTGCACAAGAAGATCCAGGTCGGTCACCAGGGCCACTCATCTGTGGAAGATGCCATGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 |
||
| CDS CCA 72 bp | ACAGTCAATGGCCACACACTTGATGGGCCCAGGTCTTaGAGCTTCTCTGGGGACAGACTTTTTGCTGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: TVNGHTLDGPRS*SFSGDRLFAAQ Trigger: CTGTGCAGCAAAAAGTCTGTCCCCAGAGAAGCTCCAAGACCTGGGCCCATCAAGTGTGTGGCCATTGACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000107421.8 ENSMUST00000107423.2 ENSMUST00000107425.8 ENSMUST00000138167.2 |
||