Pregenerated sensors for AEBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030232Ensembl transcript IDs: ENSMUST00000032359.15, ENSMUST00000087614.11, ENSMUST00000095350.11, ENSMUST00000160836.8, ENSMUST00000161335.8, ENSMUST00000162903.7
Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TGTTGGGGAAGACAATTCTCCGGTCTGTTCTCGCTTCAGACCACGTaGCTCCCAGGCATGGAACTCAGGCCACCATGCCTGTTGCCCAAC | + |
Preference number: 1 (lower is better) Translates to: CWGRQFSGLFSLQTT*LPGMELRPPCLLPN Trigger: GTTGGGCAACAGGCATGGTGGCCTGAGTTCCATGCCTGGGAGTCACGTGGTCTGAAGCGAGAACAGACCGGAGAATTGTCTTCCCCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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3UTR GCA 90 bp | AGACCACGTGACTCCCAGGCATGGAACTCAGGCCACCATGCCTGTTaGCCAACACCTTCATCGAGAGCCACCTCAATGGCACCTATTTCC | + |
Preference number: 1 (lower is better) Translates to: RPRDSQAWNSGHHAC*PTPSSRATSMAPIS Trigger: GGAAATAGGTGCCATTGAGGTGGCTCTCGATGAAGGTGTTGGGCAACAGGCATGGTGGCCTGAGTTCCATGCCTGGGAGTCACGTGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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3UTR CCA 90 bp | CAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTCTATTATaGGTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCC | + |
Preference number: 1 (lower is better) Translates to: QRLSHCQRECHKLLL*VSVLPQRLSGRTPA Trigger: GGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR GCA 90 bp | AAGCAGCGAGCATGCAAAGCCTTTTCAGAAGCTGTTCCACTGAGTTaGCAGAGAGTGTCTGCGCAGTCTCCCACAGCGCCATTCCATGCC | + |
Preference number: 1 (lower is better) Translates to: KQRACKAFSEAVPLS*QRVSAQSPTAPFHA Trigger: GGCATGGAATGGCGCTGTGGGAGACTGCGCAGACACTCTCTGGCAACTCAGTGGAACAGCTTCTGAAAAGGCTTTGCATGCTCGCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR CCA 90 bp | AATTCTCCGGTCTGTTCTCGCTTCAGACCACGTGACTCCCAGGCATaGAACTCAGGCCACCATGCCTGTTGCCCAACACCTTCATCGAGA | + |
Preference number: 1 (lower is better) Translates to: NSPVCSRFRPRDSQA*NSGHHACCPTPSSR Trigger: TCTCGATGAAGGTGTTGGGCAACAGGCATGGTGGCCTGAGTTCCATGCCTGGGAGTCACGTGGTCTGAAGCGAGAACAGACCGGAGAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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3UTR TCA 90 bp | AGCTTAAGCAGCGAGCATGCAAAGCCTTTTCAGAAGCTGTTCCACTaGGTTGCCAGAGAGTGTCTGCGCAGTCTCCCACAGCGCCATTCC | + |
Preference number: 1 (lower is better) Translates to: SLSSEHAKPFQKLFH*VARECLRSLPQRHS Trigger: GGAATGGCGCTGTGGGAGACTGCGCAGACACTCTCTGGCAACTCAGTGGAACAGCTTCTGAAAAGGCTTTGCATGCTCGCTGCTTAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR TCA 90 bp | GCAGTTGCCCACAGCACCGTACTGACAGGACAAACACTTTGTCAGTaGTTTTGTGTGGAGTACAATCCTGGCGGCCTTCGGGGGCATCAG | + |
Preference number: 1 (lower is better) Translates to: AVAHSTVLTGQTLCQ*FCVEYNPGGLRGHQ Trigger: CTGATGCCCCCGAAGGCCGCCAGGATTGTACTCCACACAAAATCACTGACAAAGTGTTTGTCCTGTCAGTACGGTGCTGTGGGCAACTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR GCA 90 bp | CAAAGCCTTTTCAGAAGCTGTTCCACTGAGTTGCCAGAGAGTGTCTaGGCAGTCTCCCACAGCGCCATTCCATGCCATGTGGACTGCAGT | + |
Preference number: 1 (lower is better) Translates to: QSLFRSCSTELPESV*AVSHSAIPCHVDCS Trigger: ACTGCAGTCCACATGGCATGGAATGGCGCTGTGGGAGACTGCGCAGACACTCTCTGGCAACTCAGTGGAACAGCTTCTGAAAAGGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR GCA 90 bp | GCTCCCAACAGTAAGGAACAGCGACTCAGCCACTGTCAGAGGGAGTaGCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTT | + |
Preference number: 1 (lower is better) Translates to: APNSKEQRLSHCQRE*HKLLLWVSVLPQRL Trigger: AAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTGTTCCTTACTGTTGGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR GCA 90 bp | AGAATGTCAACCTTGAGGAACACACAACAGAGAACAGCAAGGCTCTaGAGCCTTCTAGAGAAACCACAGGCCAGACAGGTCCTGAGGACA | + |
Preference number: 1 (lower is better) Translates to: RMSTLRNTQQRTARL*SLLEKPQARQVLRT Trigger: TGTCCTCAGGACCTGTCTGGCCTGTGGTTTCTCTAGAAGGCTGCAGAGCCTTGCTGTTCTCTGTTGTGTGTTCCTCAAGGTTGACATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CCA 90 bp | CAGCAGGGGTCAGGCATGCTATACTACTACTATACTATACTACTGTaGCCAACCCGAAGGGACTTCTCCACACCTGTTTGTCTCCTCCAC | + |
Preference number: 1 (lower is better) Translates to: QQGSGMLYYYYTILL*PTRRDFSTPVCLLH Trigger: GTGGAGGAGACAAACAGGTGTGGAGAAGTCCCTTCGGGTTGGCCACAGTAGTATAGTATAGTAGTAGTATAGCATGCCTGACCCCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR TCA 90 bp | TTCTTTCCTTTTTGGTTTGTTTGCCTCAGGATATCACTCGGGCCTTaGACTCTTGGAAATCCTCTTGCTTCGTCCTCCCAAATGCAGGGC | + |
Preference number: 1 (lower is better) Translates to: FFPFWFVCLRISLGP*TLGNPLASSSQMQG Trigger: GCCCTGCATTTGGGAGGACGAAGCAAGAGGATTTCCAAGAGTTCAAGGCCCGAGTGATATCCTGAGGCAAACAAACCAAAAAGGAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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3UTR CCA 90 bp | CAGAGAGTGTCTGCGCAGTCTCCCACAGCGCCATTCCATGCCATGTaGACTGCAGTATATATTAATATATTCCACAGAAGACCTCCTTCA | + |
Preference number: 1 (lower is better) Translates to: QRVSAQSPTAPFHAM*TAVYINIFHRRPPS Trigger: TGAAGGAGGTCTTCTGTGGAATATATTAATATATACTGCAGTCCACATGGCATGGAATGGCGCTGTGGGAGACTGCGCAGACACTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR TCA 90 bp | GGAGCTCTAGCCCCGTGCTCACTACTACTATCAACATGGCCATATTaGGTACAAACTGTGTGGTCTGTGTTCACTGCTCCAAAAATGTTA | + |
Preference number: 1 (lower is better) Translates to: GALAPCSLLLSTWPY*VQTVWSVFTAPKML Trigger: TAACATTTTTGGAGCAGTGAACACAGACCACACAGTTTGTACTCAATATGGCCATGTTGATAGTAGTAGTGAGCACGGGGCTAGAGCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR TCA 90 bp | ATTCTTTTCGCTAGAACAAACGTTCCTTGTGGTTGTAACAGAGTCTaGCTTACAGACTCTCATTCAATCCCTGAAAGACAAAGCACACAT | + |
Preference number: 1 (lower is better) Translates to: ILFARTNVPCGCNRV*LTDSHSIPERQSTH Trigger: ATGTGTGCTTTGTCTTTCAGGGATTGAATGAGAGTCTGTAAGTCAGACTCTGTTACAACCACAAGGAACGTTTGTTCTAGCGAAAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR TCA 90 bp | TTTTCTTTACAAATAAACCACATATGTTTATGTATCTCTGCAACCTaGGGTCTTGTCAGACACATCACTGTGTCAGGCTTTCTACTCGAA | + |
Preference number: 1 (lower is better) Translates to: FSLQINHICLCISAT*GLVRHITVSGFLLE Trigger: TTCGAGTAGAAAGCCTGACACAGTGATGTGTCTGACAAGACCTCAGGTTGCAGAGATACATAAACATATGTGGTTTATTTGTAAAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR GCA 90 bp | AAACAACAGATCATCCATGTTTTTAACTCTGGCAAATTCTACCTTTaGAGAAGATCATTTGCACATTTACTTGTTGGGGAAGACAATTCT | + |
Preference number: 1 (lower is better) Translates to: KQQIIHVFNSGKFYL*RRSFAHLLVGEDNS Trigger: AGAATTGTCTTCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCCAGAGTTAAAAACATGGATGATCTGTTGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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3UTR GCA 90 bp | TTTGAAATTTTCTTTACAAATAAACCACATATGTTTATGTATCTCTaGAACCTGAGGTCTTGTCAGACACATCACTGTGTCAGGCTTTCT | + |
Preference number: 1 (lower is better) Translates to: FEIFFTNKPHMFMYL*NLRSCQTHHCVRLS Trigger: AGAAAGCCTGACACAGTGATGTGTCTGACAAGACCTCAGGTTGCAGAGATACATAAACATATGTGGTTTATTTGTAAAGAAAATTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CAA 90 bp | GTAGGTCCCTTTATTCTGTCTGTCAGTAAAGGCAGATACCATCCCTaGCTAAGCTCAACCCCCAGTGTCCCCTGCGCTGCAGTTGCCCAC | + |
Preference number: 2 (lower is better) Translates to: VGPFILSVSKGRYHP*LSSTPSVPCAAVAH Trigger: GTGGGCAACTGCAGCGCAGGGGACACTGGGGGTTGAGCTTAGCAAGGGATGGTATCTGCCTTTACTGACAGACAGAATAAAGGGACCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CAA 90 bp | CTGCTCCTTCCACCCCAAGATGAACAGCGCAAGGATCACAGGAATTaGGTGTGGAAGGAAGTTTCCGGTCCACTGCTGCTCGACCCTTTG | + |
Preference number: 2 (lower is better) Translates to: LLLPPQDEQRKDHRN*VWKEVSGPLLLDPL Trigger: CAAAGGGTCGAGCAGCAGTGGACCGGAAACTTCCTTCCACACCAAATTCCTGTGATCCTTGCGCTGTTCATCTTGGGGTGGAAGGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR-3UTR CCA 90 bp | CATTTGGCTCGCTGCTCCTTCCACCCCAAGATGAACAGCGCAAGGATCACAGGAGCCAGGAGACACCTGTaGAGATGTGTGTTTACGCTG | + |
Preference number: 2 (lower is better) Translates to: HLARCSFHPKMNSARITGARRHL*RCVFTL Trigger: CAGCGTAAACACACATCTCCACAGGTGTCTCCTGGC...TCCTGTGATCCTTGCGCTGTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR CAA 90 bp | TTTGCCTCAGGATATCACTCGGGCCTTGAACTCTTGGAAATCCTCTaGCTTCGTCCTCCCAAATGCAGGGCTTTAGTCAGCACACCCGGC | + |
Preference number: 2 (lower is better) Translates to: FASGYHSGLELLEIL*LRPPKCRALVSTPG Trigger: GCCGGGTGTGCTGACTAAAGCCCTGCATTTGGGAGGACGAAGCAAGAGGATTTCCAAGAGTTCAAGGCCCGAGTGATATCCTGAGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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3UTR-3UTR GCA 90 bp | CTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTGTTCTTAGACATTAACTTGCCAGAGAGTGTCTaGGCAGTCTCCCACAGCGCC | + |
Preference number: 2 (lower is better) Translates to: LRDFLEGRPPNALFLDINLPESV*AVSHSA Trigger: GGCGCTGTGGGAGACTGCGCAGACACTCTCTGGCAA...GTTAATGTCTAAGAACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR-3UTR CCA 90 bp | GTCAACCTTGAGGAACACACAACAGAGAACAGCAAGGCTCTGCAGCCTTCTAGACAAGCAAAGGGACCCTaGATACCTGGGCACGCAGAG | + |
Preference number: 2 (lower is better) Translates to: VNLEEHTTENSKALQPSRQAKGP*IPGHAE Trigger: CTCTGCGTGCCCAGGTATCCAGGGTCCCTTTGCTTG...TCTAGAAGGCTGCAGAGCCTTGCTGTTCTCTGTTGTGTGTTCCTCAAGGTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CAA 90 bp | CCGTCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTaGTTCTTAGACATTAACAGTAGTACACAGTCCCTTCAGTCTGCA | + |
Preference number: 2 (lower is better) Translates to: PSSLRDFLEGRPPNA*FLDINSSTQSLQSA Trigger: TGCAGACTGAAGGGACTGTGTACTACTGTTAATGTCTAAGAACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR CAA 90 bp | GCTGGCCATTCTCTCTCCTTACACGCAAGGCTGCTAGAAATGCATTaGGCCAGGGGGCCTATGGTCTCTAAGCACAAGATCTACTACTAC | + |
Preference number: 2 (lower is better) Translates to: AGHSLSLHARLLEMH*ARGPMVSKHKIYYY Trigger: GTAGTAGTAGATCTTGTGCTTAGAGACCATAGGCCCCCTGGCCAAATGCATTTCTAGCAGCCTTGCGTGTAAGGAGAGAGAATGGCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR-3UTR TCA 90 bp | CAGAGGGAGTGCCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTTCAGAAGCTGTTCCACTaGGTTGCCAGAGAGTGTCTG | + |
Preference number: 2 (lower is better) Translates to: QRECHKLLLWVSVLPQRLQKLFH*VARECL Trigger: CAGACACTCTCTGGCAACTCAGTGGAACAGCTTCTG...AAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGCACTCCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR-3UTR CCA 90 bp | CAACCCAACTCCTCCAAGCATTTGGCTCGCTGCTCCTTCCACCCCAAGATGAACTATACTATACTACTGTaGCCAACCCGAAGGGACTTC | + |
Preference number: 2 (lower is better) Translates to: QPNSSKHLARCSFHPKMNYTILL*PTRRDF Trigger: GAAGTCCCTTCGGGTTGGCCACAGTAGTATAGTATA...GTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATGCTTGGAGGAGTTGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR CAA 90 bp | TTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTCCTCCAAGCATTaGGCTCGCTGCTCCTTCCACCCCAAGATGAACAGCGCAAGGATC | + |
Preference number: 2 (lower is better) Translates to: FLCSPVKFQPNSSKH*ARCSFHPKMNSARI Trigger: GATCCTTGCGCTGTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATGCTTGGAGGAGTTGGGTTGAAATTTAACTGGCGAACACAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR-3UTR GCA 90 bp | CAGCAGCCTCTCACAGATTATAGCTCCCTCTTAGCCTTTTCTGTTCCTCTGTCGAACCGGTTAAAGCCATaGCTTAGACTGGCTCTCCTA | + |
Preference number: 2 (lower is better) Translates to: QQPLTDYSSLLAFSVPLSNRLKP*LRLALL Trigger: TAGGAGAGCCAGTCTAAGGCATGGCTTTAACCGGTT...CGACAGAGGAACAGAAAAGGCTAAGAGGGAGCTATAATCTGTGAGAGGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR-3UTR GCA 90 bp | GAGTGCTTTCTGCAGCCTGACTGCATAGCAGGCGCTTACTTTACGGTACCGCTCGTGTCCCCGCGTGTTTaGTTTTATGTATTTATGAAT | + |
Preference number: 2 (lower is better) Translates to: ECFLQPDCIAGAYFTVPLVSPRV*FYVFMN Trigger: ATTCATAAATACATAAAAGCAAACACGCGGGGACAC...GAGCGGTACCGTAAAGTAAGCGCCTGCTATGCAGTCAGGCTGCAGAAAGCACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR-3UTR GCA 90 bp | GGAGTGAGGACTCCAAGGAAGGAGTGCTTTCTGCAGCCTGACTGCATAGCAGGCTTCTTATCAGAGTTCTaGAAAAGAACACAAATGGCA | + |
Preference number: 2 (lower is better) Translates to: GVRTPRKECFLQPDCIAGFLSEF*KRTQMA Trigger: TGCCATTTGTGTTCTTTTGCAGAACTCTGATAAGAA...GCCTGCTATGCAGTCAGGCTGCAGAAAGCACTCCTTCCTTGGAGTCCTCACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR CAA 90 bp | CGGAGCTCTAGCCCCGTGCTCACTACTACTATCAACATGGCCATATaGAGTACAAACTGTGTGGTCTGTGTTCACTGCTCCAAAAATGTT | + |
Preference number: 2 (lower is better) Translates to: RSSSPVLTTTINMAI*STNCVVCVHCSKNV Trigger: AACATTTTTGGAGCAGTGAACACAGACCACACAGTTTGTACTCAATATGGCCATGTTGATAGTAGTAGTGAGCACGGGGCTAGAGCTCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR-3UTR GCA 90 bp | ACACTGCTTCAACCACATTTACCCACTTTGATATTCAGTCAATATTATCTCATCTTGCCAGAGAGTGTCTaGGCAGTCTCCCACAGCGCC | + |
Preference number: 2 (lower is better) Translates to: TLLQPHLPTLIFSQYYLILPESV*AVSHSA Trigger: GGCGCTGTGGGAGACTGCGCAGACACTCTCTGGCAA...GATGAGATAATATTGACTGAATATCAAAGTGGGTAAATGTGGTTGAAGCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CAA 90 bp | AGTACACAGTCCCTTCAGTCTGCAGACATCTCTCCTAAAGGTGCTTaGTTAGCAATCCCTCTGGCAGCACTAGTGAATTACAATTTCCTT | + |
Preference number: 2 (lower is better) Translates to: STQSLQSADISPKGA*LAIPLAALVNYNFL Trigger: AAGGAAATTGTAATTCACTAGTGCTGCCAGAGGGATTGCTAACAAAGCACCTTTAGGAGAGATGTCTGCAGACTGAAGGGACTGTGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR CAA 90 bp | ACTCTGGCAAATTCTACCTTTGCAGAAGATCATTTGCACATTTACTaGTTGGGGAAGACAATTCTCCGGTCTGTTCTCGCTTCAGACCAC | + |
Preference number: 2 (lower is better) Translates to: TLANSTFAEDHLHIY*LGKTILRSVLASDH Trigger: GTGGTCTGAAGCGAGAACAGACCGGAGAATTGTCTTCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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3UTR-3UTR CCA 90 bp | CCCAACAGTAAGGAACAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTTACACACTGTCAAGATaGTTATCTTACAGTGCTTTT | + |
Preference number: 2 (lower is better) Translates to: PNSKEQRLSHCQRECHKLYTLSR*LSYSAF Trigger: AAAAGCACTGTAAGATAACCATCTTGACAGTGTGTA...AAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTGTTCCTTACTGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR-3UTR TCA 90 bp | CAACAGATCATCCATGTTTTTAACTCTGGCAAATTCTACCTTTGCAGAAGATCACAGAAGCTGTTCCACTaGGTTGCCAGAGAGTGTCTG | + |
Preference number: 2 (lower is better) Translates to: QQIIHVFNSGKFYLCRRSQKLFH*VARECL Trigger: CAGACACTCTCTGGCAACTCAGTGGAACAGCTTCTG...TGATCTTCTGCAAAGGTAGAATTTGCCAGAGTTAAAAACATGGATGATCTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR-3UTR GCA 90 bp | ATATTAACACGCTGTCCCCATGAGAGAGAGAGAGAGACCCTAGTCCTGAAAAGGGTGTCCCCGCGTGTTTaGTTTTATGTATTTATGAAT | + |
Preference number: 2 (lower is better) Translates to: ILTRCPHERERETLVLKRVSPRV*FYVFMN Trigger: ATTCATAAATACATAAAAGCAAACACGCGGGGACAC...CCTTTTCAGGACTAGGGTCTCTCTCTCTCTCTCATGGGGACAGCGTGTTAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR CAA 90 bp | GGATACCTGGGCACGCAGAGGCTAATCAACAACCAGCAGCATGGTTaGACATCACAAATTTTCTACATTGACAGTAATGAATGTTCTCTA | + |
Preference number: 2 (lower is better) Translates to: GYLGTQRLINNQQHG*TSQIFYIDSNECSL Trigger: TAGAGAACATTCATTACTGTCAATGTAGAAAATTTGTGATGTCAAACCATGCTGCTGGTTGTTGATTAGCCTCTGCGTGCCCAGGTATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR-3UTR GCA 90 bp | GAGAAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTCCTCCAAGCATTCACAAAGCCTGCAGTTaGAGTGAAATTAAGTCTATC | + |
Preference number: 2 (lower is better) Translates to: EKPFCVRQLNFNPTPPSIHKACS*SEIKSI Trigger: GATAGACTTAATTTCACTGCAACTGCAGGCTTTGTG...AATGCTTGGAGGAGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR-3UTR CCA 90 bp | GCCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGATACACACTGTCAAGATaGTTATCTTACAGTGCTTTT | + |
Preference number: 2 (lower is better) Translates to: AINFYYGSPSSLRDFLEGYTLSR*LSYSAF Trigger: AAAAGCACTGTAAGATAACCATCTTGACAGTGTGTA...TCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR-3UTR CCA 90 bp | ACATTAACAGTAGTACACAGTCCCTTCAGTCTGCAGACATCTCTCCTAAAGGTGCCATTCCATGCCATGTaGACTGCAGTATATATTAAT | + |
Preference number: 2 (lower is better) Translates to: TLTVVHSPFSLQTSLLKVPFHAM*TAVYIN Trigger: ATTAATATATACTGCAGTCCACATGGCATGGAATGG...CACCTTTAGGAGAGATGTCTGCAGACTGAAGGGACTGTGTACTACTGTTAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR-3UTR GCA 90 bp | AATACTCAAGCAAGGTCTACAATCATCGGTCAATTAATGACTTACAAGAACATGTTCCATATGGCTTCTTaGCTGCCAAGCAAGAAAGTG | + |
Preference number: 2 (lower is better) Translates to: NTQARSTIIGQLMTYKNMFHMAS*LPSKKV Trigger: CACTTTCTTGCTTGGCAGGCAAGAAGCCATATGGAA...CATGTTCTTGTAAGTCATTAATTGACCGATGATTGTAGACCTTGCTTGAGTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR GCA 72 bp | GCTAAGCTCAACCCCCAGTGTCCCCTGCGCTGCAGTTaGCCACAGCACCGTACTGACAGGACAAACACTTTG | + |
Preference number: 3 (lower is better) Translates to: AKLNPQCPLRCS*PQHRTDRTNTL Trigger: CAAAGTGTTTGTCCTGTCAGTACGGTGCTGTGGGCAACTGCAGCGCAGGGGACACTGGGGGTTGAGCTTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CCA 72 bp | GTCTGTTCTCGCTTCAGACCACGTGACTCCCAGGCATaGAACTCAGGCCACCATGCCTGTTGCCCAACACCT | + |
Preference number: 3 (lower is better) Translates to: VCSRFRPRDSQA*NSGHHACCPTP Trigger: AGGTGTTGGGCAACAGGCATGGTGGCCTGAGTTCCATGCCTGGGAGTCACGTGGTCTGAAGCGAGAACAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
||
3UTR TCA 72 bp | AGACAATTCTCCGGTCTGTTCTCGCTTCAGACCACGTaGCTCCCAGGCATGGAACTCAGGCCACCATGCCTG | + |
Preference number: 3 (lower is better) Translates to: RQFSGLFSLQTT*LPGMELRPPCL Trigger: CAGGCATGGTGGCCTGAGTTCCATGCCTGGGAGTCACGTGGTCTGAAGCGAGAACAGACCGGAGAATTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
||
3UTR GCA 72 bp | TTCAGAAGCTGTTCCACTGAGTTGCCAGAGAGTGTCTaGGCAGTCTCCCACAGCGCCATTCCATGCCATGTG | + |
Preference number: 3 (lower is better) Translates to: FRSCSTELPESV*AVSHSAIPCHV Trigger: CACATGGCATGGAATGGCGCTGTGGGAGACTGCGCAGACACTCTCTGGCAACTCAGTGGAACAGCTTCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
||
3UTR GCA 72 bp | AGGACTCCAAGGAAGGAGTGCTTTCTGCAGCCTGACTaGATAGCAGGCGCTTACTTTACGGTACCGCTCCCA | + |
Preference number: 3 (lower is better) Translates to: RTPRKECFLQPD*IAGAYFTVPLP Trigger: TGGGAGCGGTACCGTAAAGTAAGCGCCTGCTATGCAGTCAGGCTGCAGAAAGCACTCCTTCCTTGGAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
||
3UTR TCA 72 bp | GTGTCCCCTGCGCTGCAGTTGCCCACAGCACCGTACTaGCAGGACAAACACTTTGTCAGTGATTTTGTGTGG | + |
Preference number: 3 (lower is better) Translates to: VSPALQLPTAPY*QDKHFVSDFVW Trigger: CCACACAAAATCACTGACAAAGTGTTTGTCCTGTCAGTACGGTGCTGTGGGCAACTGCAGCGCAGGGGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
||
3UTR CCA 72 bp | CACCCCAAGATGAACAGCGCAAGGATCACAGGAATTTaGTGTGGAAGGAAGTTTCCGGTCCACTGCTGCTCG | + |
Preference number: 3 (lower is better) Translates to: HPKMNSARITGI*CGRKFPVHCCS Trigger: CGAGCAGCAGTGGACCGGAAACTTCCTTCCACACCAAATTCCTGTGATCCTTGCGCTGTTCATCTTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
||
3UTR-3UTR CAA 90 bp | CAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTCTATTATGGGTCTCCAGCTGTTCCACTGAGTaGCCAGAGAGTGTCTGCGCA | + |
Preference number: 3 (lower is better) Translates to: QRLSHCQRECHKLLLWVSSCSTE*PESVCA Trigger: TGCGCAGACACTCTCTGGCAACTCAGTGGAACAGCT...GGAGACCCATAATAGAAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
||
3UTR GCA 72 bp | ACCTTGAGGAACACACAACAGAGAACAGCAAGGCTCTaGAGCCTTCTAGAGAAACCACAGGCCAGACAGGTC | + |
Preference number: 3 (lower is better) Translates to: TLRNTQQRTARL*SLLEKPQARQV Trigger: GACCTGTCTGGCCTGTGGTTTCTCTAGAAGGCTGCAGAGCCTTGCTGTTCTCTGTTGTGTGTTCCTCAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
||
3UTR CCA 72 bp | CAAGATGAACAGCGCAAGGATCACAGGAATTTGGTGTaGAAGGAAGTTTCCGGTCCACTGCTGCTCGACCCT | + |
Preference number: 3 (lower is better) Translates to: QDEQRKDHRNLV*KEVSGPLLLDP Trigger: AGGGTCGAGCAGCAGTGGACCGGAAACTTCCTTCCACACCAAATTCCTGTGATCCTTGCGCTGTTCATCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
||
3UTR-3UTR CAA 90 bp | CAGCAGCCTCTCACAGATTATAGCTCCCTCTTAGCCTTTTCTGTTCCTCTGTCGCTTCTCCACACCTGTTaGTCTCCTCCACTTCCACCT | + |
Preference number: 3 (lower is better) Translates to: QQPLTDYSSLLAFSVPLSLLHTC*SPPLPP Trigger: AGGTGGAAGTGGAGGAGACAAACAGGTGTGGAGAAG...CGACAGAGGAACAGAAAAGGCTAAGAGGGAGCTATAATCTGTGAGAGGCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
||
3UTR TCA 72 bp | CACAGCACCGTACTGACAGGACAAACACTTTGTCAGTaGTTTTGTGTGGAGTACAATCCTGGCGGCCTTCGG | + |
Preference number: 3 (lower is better) Translates to: HSTVLTGQTLCQ*FCVEYNPGGLR Trigger: CCGAAGGCCGCCAGGATTGTACTCCACACAAAATCACTGACAAAGTGTTTGTCCTGTCAGTACGGTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
||
3UTR GCA 72 bp | AGTAAGGAACAGCGACTCAGCCACTGTCAGAGGGAGTaGCATAAACTTCTATTATGGGTCTCCGTCCTCCCT | + |
Preference number: 3 (lower is better) Translates to: SKEQRLSHCQRE*HKLLLWVSVLP Trigger: AGGGAGGACGGAGACCCATAATAGAAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTGTTCCTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR GCA 72 bp | AAATTTCAACCCAACTCCTCCAAGCATTTGGCTCGCTaGTCCTTCCACCCCAAGATGAACAGCGCAAGGATC | + |
Preference number: 3 (lower is better) Translates to: KFQPNSSKHLAR*SFHPKMNSARI Trigger: GATCCTTGCGCTGTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATGCTTGGAGGAGTTGGGTTGAAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR CCA 72 bp | AGCCACTGTCAGAGGGAGTGCCATAAACTTCTATTATaGGTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGG | + |
Preference number: 3 (lower is better) Translates to: SHCQRECHKLLL*VSVLPQRLSGR Trigger: CCTTCCAGAAAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGCACTCCCTCTGACAGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR TCA 72 bp | AGTAAAAACTGCTGGTATTGCTGTCACTGTAGGGAGTaGGGACTCCAAGGAAGGAGTGCTTTCTGCAGCCTG | + |
Preference number: 3 (lower is better) Translates to: SKNCWYCCHCRE*GLQGRSAFCSL Trigger: CAGGCTGCAGAAAGCACTCCTTCCTTGGAGTCCTCACTCCCTACAGTGACAGCAATACCAGCAGTTTTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR TCA 72 bp | AAACTAGCTCACTTACAAGTGTCAAGCCCAAGTCAATaGCAAGCAAAGGGACCCTGGATACCTGGGCACGCA | + |
Preference number: 3 (lower is better) Translates to: KLAHLQVSSPSQ*QAKGPWIPGHA Trigger: TGCGTGCCCAGGTATCCAGGGTCCCTTTGCTTGTCATTGACTTGGGCTTGACACTTGTAAGTGAGCTAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR GCA 72 bp | TCCATATCATTCTTGCTGCGAAACCGGTTAAAGCCATaGCTTAGACTGGCTCTCCTAGTCAACGGGGCTTTG | + |
Preference number: 3 (lower is better) Translates to: SISFLLRNRLKP*LRLALLVNGAL Trigger: CAAAGCCCCGTTGACTAGGAGAGCCAGTCTAAGGCATGGCTTTAACCGGTTTCGCAGCAAGAATGATATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR-3UTR CAA 90 bp | CCCAACAGTAAGGAACAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTGGTGTCCCCGCGTGTTaGCTTTTATGTATTTATGAA | + |
Preference number: 3 (lower is better) Translates to: PNSKEQRLSHCQRECHKLGVPAC*LLCIYE Trigger: TTCATAAATACATAAAAGCAAACACGCGGGGACACC...AAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTGTTCCTTACTGTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
||
3UTR-3UTR CAA 90 bp | CTTTCCTTTTTGGTTTGTTTGCCTCAGGATATCACTCGGGCCTTGAACTCTTGGGGAGGAAGGAAGGGGTaGACTGTAATGTGCAACTTT | + |
Preference number: 3 (lower is better) Translates to: LSFLVCLPQDITRALNSWGGRKG*TVMCNF Trigger: AAAGTTGCACATTACAGTCAACCCCTTCCTTCCTCC...CCAAGAGTTCAAGGCCCGAGTGATATCCTGAGGCAAACAAACCAAAAAGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
||
3UTR TCA 72 bp | TTTTGGTTTGTTTGCCTCAGGATATCACTCGGGCCTTaGACTCTTGGAAATCCTCTTGCTTCGTCCTCCCAA | + |
Preference number: 3 (lower is better) Translates to: FWFVCLRISLGP*TLGNPLASSSQ Trigger: TTGGGAGGACGAAGCAAGAGGATTTCCAAGAGTTCAAGGCCCGAGTGATATCCTGAGGCAAACAAACCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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3UTR GCA 72 bp | AGAAATTTAAATGAAAAGTTCCACCCAAACGCCATGTaGTTCGGTGCCTGTGGCAGCACTTCCTGTGAAGTG | + |
Preference number: 3 (lower is better) Translates to: RNLNEKFHPNAM*FGACGSTSCEV Trigger: CACTTCACAGGAAGTGCTGCCACAGGCACCGAAGCACATGGCGTTTGGGTGGAACTTTTCATTTAAATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR-3UTR CAA 90 bp | ACATTAACAGTAGTACACAGTCCCTTCAGTCTGCAGACATCTCTCCTAAAGGTGCTTTCCCTAAGCCCATaGTCAGTGACTAAGACTGCA | + |
Preference number: 3 (lower is better) Translates to: TLTVVHSPFSLQTSLLKVLSLSP*SVTKTA Trigger: TGCAGTCTTAGTCACTGACAATGGGCTTAGGGAAAG...CACCTTTAGGAGAGATGTCTGCAGACTGAAGGGACTGTGTACTACTGTTAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR CCA 72 bp | AAAATAACATCAACAATCCTTCGCACTGGAGAGGTTTaGGTACCCACGCGTAGGTCCCTTTATTCTGTCTGT | + |
Preference number: 3 (lower is better) Translates to: KITSTILRTGEV*VPTRRSLYSVC Trigger: ACAGACAGAATAAAGGGACCTACGCGTGGGTACCCAAACCTCTCCAGTGCGAAGGATTGTTGATGTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CCA 72 bp | TCAGGCATGCTATACTACTACTATACTATACTACTGTaGCCAACCCGAAGGGACTTCTCCACACCTGTTTGT | + |
Preference number: 3 (lower is better) Translates to: SGMLYYYYTILL*PTRRDFSTPVC Trigger: ACAAACAGGTGTGGAGAAGTCCCTTCGGGTTGGCCACAGTAGTATAGTATAGTAGTAGTATAGCATGCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR-3UTR CAA 90 bp | AAATTTAGAGTAAAAACTGCTGGTATTGCTGTCACTGTAGGGAGTGAGGACTCCCTTTCCCTAAGCCCATaGTCAGTGACTAAGACTGCA | + |
Preference number: 3 (lower is better) Translates to: KFRVKTAGIAVTVGSEDSLSLSP*SVTKTA Trigger: TGCAGTCTTAGTCACTGACAATGGGCTTAGGGAAAG...GGAGTCCTCACTCCCTACAGTGACAGCAATACCAGCAGTTTTTACTCTAAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR-3UTR CAA 90 bp | GAGAAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTCCTCCAAGCATTAAGGATCACAGGAATTaGGTGTGGAAGGAAGTTTCC | + |
Preference number: 3 (lower is better) Translates to: EKPFCVRQLNFNPTPPSIKDHRN*VWKEVS Trigger: GGAAACTTCCTTCCACACCAAATTCCTGTGATCCTT...AATGCTTGGAGGAGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR TCA 72 bp | AAAGACACATTTTCTTCAGGCAGAGAATGTCAACCTTaGGGAACACACAACAGAGAACAGCAAGGCTCTGCA | + |
Preference number: 3 (lower is better) Translates to: KDTFSSGRECQP*GTHNREQQGSA Trigger: TGCAGAGCCTTGCTGTTCTCTGTTGTGTGTTCCTCAAGGTTGACATTCTCTGCCTGAAGAAAATGTGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CCA 72 bp | CTACCTTTGCAGAAGATCATTTGCACATTTACTTGTTaGGGAAGACAATTCTCCGGTCTGTTCTCGCTTCAG | + |
Preference number: 3 (lower is better) Translates to: LPLQKIICTFTC*GRQFSGLFSLQ Trigger: CTGAAGCGAGAACAGACCGGAGAATTGTCTTCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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3UTR-3UTR CAA 90 bp | ACATTAACAGTAGTACACAGTCCCTTCAGTCTGCAGACATCTCTCCTAAAGGTGGGTGTCCCCGCGTGTTaGCTTTTATGTATTTATGAA | + |
Preference number: 3 (lower is better) Translates to: TLTVVHSPFSLQTSLLKVGVPAC*LLCIYE Trigger: TTCATAAATACATAAAAGCAAACACGCGGGGACACC...CACCTTTAGGAGAGATGTCTGCAGACTGAAGGGACTGTGTACTACTGTTAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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3UTR-3UTR CAA 90 bp | CTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTTTTCAGATATTTTCCTaGGCAGCAGCCTCTCACAGA | + |
Preference number: 3 (lower is better) Translates to: LFLREKPFCVRQLNFNPTFQIFS*AAASHR Trigger: TCTGTGAGAGGCTGCTGCCAAGGAAAATATCTGAAA...AGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR TCA 72 bp | GCTAGAACAAACGTTCCTTGTGGTTGTAACAGAGTCTaGCTTACAGACTCTCATTCAATCCCTGAAAGACAA | + |
Preference number: 3 (lower is better) Translates to: ARTNVPCGCNRV*LTDSHSIPERQ Trigger: TTGTCTTTCAGGGATTGAATGAGAGTCTGTAAGTCAGACTCTGTTACAACCACAAGGAACGTTTGTTCTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR GCA 90 bp | TGCCCATCCGCAGTGCTTCCCCCTCGTCCCTCAGGCTCCATGACTGTTCCATGCCATCGCCGCTGCTGCTaGTCGCCGCGCCCGGGCTCA | + |
Preference number: 4 (lower is better) Translates to: CPSAVLPPRPSGSMTVPCHRRCC*SPRPGS Trigger: TGAGCCCGGGCGCGGCGAGCAGCAGCAGCGGCGATG...GCATGGAACAGTCATGGAGCCTGAGGGACGAGGGGGAAGCACTGCGGATGGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR GCA 90 bp | TCCGCAGTGCTTCCCCCTCGTCCCTCAGGCTCCATGACTGTTCCATGCCTACCTCCAGGCTCTCGGCGCTaGTCTCCTCCTCCGCGCCGC | + |
Preference number: 4 (lower is better) Translates to: SAVLPPRPSGSMTVPCLPPGSRR*SPPPRR Trigger: GCGGCGCGGAGGAGGAGAGCAGCGCCGAGAGCCTGG...AGGTAGGCATGGAACAGTCATGGAGCCTGAGGGACGAGGGGGAAGCACTGCGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR GCA 90 bp | GGAGTGAGGACTCCAAGGAAGGAGTGCTTTCTGCAGCCTGACTGCATAGCAGGCCGCGGCCACCGCCTCTaGCTCCGCCTCCTCGTCATC | + |
Preference number: 4 (lower is better) Translates to: GVRTPRKECFLQPDCIAGRGHRL*LRLLVI Trigger: GATGACGAGGAGGCGGAGGCAGAGGCGGTGGCCGCG...GCCTGCTATGCAGTCAGGCTGCAGAAAGCACTCCTTCCTTGGAGTCCTCACTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR GCA 90 bp | CAACCCAACTCCTCCAAGCATTTGGCTCGCTGCTCCTTCCACCCCAAGATGAACGCGTCTCGTCGCCGCTaGAGCCGCCGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: QPNSSKHLARCSFHPKMNASRRR*SRRCCC Trigger: GCAGCAGCAGCGGCGGCTGCAGCGGCGACGAGACGC...GTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATGCTTGGAGGAGTTGGGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR GCA 90 bp | TTTACGGTACCGCTCCCAACAGTAAGGAACAGCGACTCAGCCACTGTCAGAGGGCGCCGCCGCTGCTGCTaGCCTCGTCCTCGTCGTCCT | + |
Preference number: 4 (lower is better) Translates to: FTVPLPTVRNSDSATVRGRRRCC*PRPRRP Trigger: AGGACGACGAGGACGAGGGCAGCAGCAGCGGCGGCG...CCCTCTGACAGTGGCTGAGTCGCTGTTCCTTACTGTTGGGAGCGGTACCGTAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR GCA 90 bp | CATTTGGCTCGCTGCTCCTTCCACCCCAAGATGAACAGCGCAAGGATCACAGGACGCCGCCGCTGCTGCTaGCCTCGTCCTCGTCGTCCT | + |
Preference number: 4 (lower is better) Translates to: HLARCSFHPKMNSARITGRRRCC*PRPRRP Trigger: AGGACGACGAGGACGAGGGCAGCAGCAGCGGCGGCG...TCCTGTGATCCTTGCGCTGTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR GCA 90 bp | TGTCTCCTCCACTTCCACCTACAAGGAGGGCAGAGAGTATGCCACAGAGCACATCCAGGCTCTCGGCGCTaGTCTCCTCCTCCGCGCCGC | + |
Preference number: 4 (lower is better) Translates to: CLLHFHLQGGQRVCHRAHPGSRR*SPPPRR Trigger: GCGGCGCGGAGGAGGAGAGCAGCGCCGAGAGCCTGG...ATGTGCTCTGTGGCATACTCTCTGCCCTCCTTGTAGGTGGAAGTGGAGGAGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR GCA 90 bp | TATACTACTGTGGCCAACCCGAAGGGACTTCTCCACACCTGTTTGTCTCCTCCACATCGCCGCTGCTGCTaGTCGCCGCGCCCGGGCTCA | + |
Preference number: 4 (lower is better) Translates to: YTTVANPKGLLHTCLSPPHRRCC*SPRPGS Trigger: TGAGCCCGGGCGCGGCGAGCAGCAGCAGCGGCGATG...TGGAGGAGACAAACAGGTGTGGAGAAGTCCCTTCGGGTTGGCCACAGTAGTATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR GCA 90 bp | GGAGTGAGGACTCCAAGGAAGGAGTGCTTTCTGCAGCCTGACTGCATAGCAGGCCCACGCTACTGCTGCTaGTACCGCCACCGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: GVRTPRKECFLQPDCIAGPRYCC*YRHRCC Trigger: GCAGCAGCGGTGGCGGTAGCAGCAGCAGTAGCGTGG...GCCTGCTATGCAGTCAGGCTGCAGAAAGCACTCCTTCCTTGGAGTCCTCACTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR CCA 90 bp | TGCCCATCCGCAGTGCTTCCCCCTCGTCCCTCAGGCTCCATGACTGTTCCATGCGTGGTCTGCCAGGTCTaGGCTGGAGTTGAAGCATGC | + |
Preference number: 4 (lower is better) Translates to: CPSAVLPPRPSGSMTVPCVVCQV*AGVEAC Trigger: GCATGCTTCAACTCCAGCCCAGACCTGGCAGACCAC...GCATGGAACAGTCATGGAGCCTGAGGGACGAGGGGGAAGCACTGCGGATGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | CAGAGGGAGTGCCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTTGCGTCTCGTCGCCGCTaGAGCCGCCGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: QRECHKLLLWVSVLPQRLASRRR*SRRCCC Trigger: GCAGCAGCAGCGGCGGCTGCAGCGGCGACGAGACGC...AAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGCACTCCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR TCA 90 bp | CCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATCGGGGGACAGCGGGCTaGGGCGGGAGAGCTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: PSPEKGATRHTAILFNSDRGTAG*GGRAPP Trigger: TGGAGGAGCTCTCCCGCCTCAGCCCGCTGTCCCCCG...ATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR GCA 90 bp | GCATGGAACTCAGGCCACCATGCCTGTTGCCCAACACCTTCATCGAGAGCCACCGGAGCGAATGTGGTCTaGCAGGTCTGGGCTGGAGTT | + |
Preference number: 4 (lower is better) Translates to: AWNSGHHACCPTPSSRATGANVV*QVWAGV Trigger: AACTCCAGCCCAGACCTGGCAGACCACATTCGCTCC...GGTGGCTCTCGATGAAGGTGTTGGGCAACAGGCATGGTGGCCTGAGTTCCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR GCA 90 bp | ACAGGTGAGGTAACCCAAGACCTTAGGGCAATAGCAGCCAGGAGACACCTGTGGTCGACACCACGCTACTaGTGCTGCTACCGCCACCGC | + |
Preference number: 4 (lower is better) Translates to: TGEVTQDLRAIAARRHLWSTPRY*CCYRHR Trigger: GCGGTGGCGGTAGCAGCAGCAGTAGCGTGGTGTCGA...CCACAGGTGTCTCCTGGCTGCTATTGCCCTAAGGTCTTGGGTTACCTCACCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR GCA 90 bp | TGTCTCCTCCACTTCCACCTACAAGGAGGGCAGAGAGTATGCCACAGAGCACATTGTCCTCCGAGTCCATaGGGCTCAGCGGCTCCCCGT | + |
Preference number: 4 (lower is better) Translates to: CLLHFHLQGGQRVCHRAHCPPSP*GSAAPR Trigger: ACGGGGAGCCGCTGAGCCGCATGGACTCGGAGGACA...ATGTGCTCTGTGGCATACTCTCTGCCCTCCTTGTAGGTGGAAGTGGAGGAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCGCCCCGCGGTCCCTTaGGCTCCTCCAGGCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVIRPAVP*APPGPP Trigger: AGGAGGGCCTGGAGGAGCCCAAGGGACCGCGGGGCG...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR TCA 90 bp | CAACCCAACTCCTCCAAGCATTTGGCTCGCTGCTCCTTCCACCCCAAGATGAACCGAGCTAGCCCTCCCTaGGAAGCAAAGCTGGCATTG | + |
Preference number: 4 (lower is better) Translates to: QPNSSKHLARCSFHPKMNRASPP*EAKLAL Trigger: CAATGCCAGCTTTGCTTCTCAGGGAGGGCTAGCTCG...GTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATGCTTGGAGGAGTTGGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
||
CDS-3UTR TCA 90 bp | GAAATCCTCTTGCTTCGTCCTCCCAAATGCAGGGCTTTAGTCAGCACACCCGGCCGAGCTAGCCCTCCCTaGGAAGCAAAGCTGGCATTG | + |
Preference number: 4 (lower is better) Translates to: EILLLRPPKCRALVSTPGRASPP*EAKLAL Trigger: CAATGCCAGCTTTGCTTCTCAGGGAGGGCTAGCTCG...GCCGGGTGTGCTGACTAAAGCCCTGCATTTGGGAGGACGAAGCAAGAGGATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR TCA 90 bp | CTCGCTTCAGACCACGTGACTCCCAGGCATGGAACTCAGGCCACCATGCCTGTTAGGAGTTCTGCTGACTaGAGTGTGTGGGTACATGGC | + |
Preference number: 4 (lower is better) Translates to: LASDHVTPRHGTQATMPVRSSAD*SVWVHG Trigger: GCCATGTACCCACACACTTCAGTCAGCAGAACTCCT...AACAGGCATGGTGGCCTGAGTTCCATGCCTGGGAGTCACGTGGTCTGAAGCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR TCA 90 bp | TGTTCTCGCTTCAGACCACGTGACTCCCAGGCATGGAACTCAGGCCACCATGCCAGGAGTTCTGCTGACTaGAGTGTGTGGGTACATGGC | + |
Preference number: 4 (lower is better) Translates to: CSRFRPRDSQAWNSGHHARSSAD*SVWVHG Trigger: GCCATGTACCCACACACTTCAGTCAGCAGAACTCCT...GGCATGGTGGCCTGAGTTCCATGCCTGGGAGTCACGTGGTCTGAAGCGAGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR GCA 90 bp | TGTCAATCTTCCAGATGCCTCCATATCATTCTTGCTGCGAAACCGGTTAAAGCCCGCGGCCACCGCCTCTaGCTCCGCCTCCTCGTCATC | + |
Preference number: 4 (lower is better) Translates to: CQSSRCLHIILAAKPVKARGHRL*LRLLVI Trigger: GATGACGAGGAGGCGGAGGCAGAGGCGGTGGCCGCG...GGCTTTAACCGGTTTCGCAGCAAGAATGATATGGAGGCATCTGGAAGATTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR CAA 72 bp | ACTGTGGCCAACCCGAAGGGACTTCTCCACACCTGTTaGTCTCCTCCACTTCCACCTACAAGGAGGGCAGAG | + |
Preference number: 4 (lower is better) Translates to: TVANPKGLLHTC*SPPLPPTRRAE Trigger: CTCTGCCCTCCTTGTAGGTGGAAGTGGAGGAGACAAACAGGTGTGGAGAAGTCCCTTCGGGTTGGCCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | GAGTGCTTTCTGCAGCCTGACTGCATAGCAGGCGCTTACTTTACGGTACCGCTCAACACCCCTCCACGCTaGCCATCGACATGTATGGAG | + |
Preference number: 4 (lower is better) Translates to: ECFLQPDCIAGAYFTVPLNTPPR*PSTCME Trigger: CTCCATACATGTCGATGGTCAGCGTGGAGGGGTGTT...GAGCGGTACCGTAAAGTAAGCGCCTGCTATGCAGTCAGGCTGCAGAAAGCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | GAGAGAGAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACGAGCTAGCCCTCCCTaGGAAGCAAAGCTGGCATTG | + |
Preference number: 4 (lower is better) Translates to: ERERDPSPEKGATRHTAIRASPP*EAKLAL Trigger: CAATGCCAGCTTTGCTTCTCAGGGAGGGCTAGCTCG...TATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | CAGAGGGAGTGCCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTTTCGACACCACGCTACTaGTGCTGCTACCGCCACCGC | + |
Preference number: 4 (lower is better) Translates to: QRECHKLLLWVSVLPQRLSTPRY*CCYRHR Trigger: GCGGTGGCGGTAGCAGCAGCAGTAGCGTGGTGTCGA...AAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGCACTCCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
||
CDS-3UTR GCA 90 bp | CCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTGTCCTCCGAGTCCATaGGGCTCAGCGGCTCCCCGT | + |
Preference number: 4 (lower is better) Translates to: PSPEKGATRHTAILFNSDCPPSP*GSAAPR Trigger: ACGGGGAGCCGCTGAGCCGCATGGACTCGGAGGACA...ATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR TCA 90 bp | GTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTGTTCCAACTCTGACTGGTTaGCGGGGTGTTATACACCTT | + |
Preference number: 4 (lower is better) Translates to: VSVLPQRLSGRTPAQCFVPTLTG*RGVIHL Trigger: AAGGTGTATAACACCCCGTCAACCAGTCAGAGTTGG...AACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | CATTTGGCTCGCTGCTCCTTCCACCCCAAGATGAACAGCGCAAGGATCACAGGAAGGAGTTCTGCTGACTaGAGTGTGTGGGTACATGGC | + |
Preference number: 4 (lower is better) Translates to: HLARCSFHPKMNSARITGRSSAD*SVWVHG Trigger: GCCATGTACCCACACACTTCAGTCAGCAGAACTCCT...TCCTGTGATCCTTGCGCTGTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | TGGGTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTTTTGAGGAGTTCTGCTaGCTGAAGTGTGTGGGTACA | + |
Preference number: 4 (lower is better) Translates to: WVSVLPQRLSGRTPAQCFFEEFC*LKCVGT Trigger: TGTACCCACACACTTCAGTCAGCAGAACTCCTCAAA...AAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGACCCA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | CTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTCGGGGGACAGCGGGCTaGGGCGGGAGAGCTCCTCCA | + |
Preference number: 4 (lower is better) Translates to: LFLREKPFCVRQLNFNPTRGTAG*GGRAPP Trigger: TGGAGGAGCTCTCCCGCCTCAGCCCGCTGTCCCCCG...AGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CCA 90 bp | TCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTGTTCTTAGACGAGTTGAAGCATGCCTaGCACTGGTCCCAGCAACAG | + |
Preference number: 4 (lower is better) Translates to: SSLRDFLEGRPPNALFLDELKHA*HWSQQQ Trigger: CTGTTGCTGGGACCAGTGCCAGGCATGCTTCAACTC...GTCTAAGAACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | GTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTGTTAAGCAAAGCTGGCATTaGAGCCACCAACTACACACT | + |
Preference number: 4 (lower is better) Translates to: VSVLPQRLSGRTPAQCFVKQSWH*SHQLHT Trigger: AGTGTGTAGTTGGTGGCTGCAATGCCAGCTTTGCTT...AACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | GAGAAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTCCTCCAAGCATTCCACGCTACTGCTGCTaGTACCGCCACCGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: EKPFCVRQLNFNPTPPSIPRYCC*YRHRCC Trigger: GCAGCAGCGGTGGCGGTAGCAGCAGCAGTAGCGTGG...AATGCTTGGAGGAGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR GCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTACACCACGCTACTGCTaGTGCTACCGCCACCGCTGC | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVITPRYC*CYRHRC Trigger: GCAGCGGTGGCGGTAGCAGCAGCAGTAGCGTGGTGT...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR CCA 90 bp | GAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACACCTGTCCATTCATCATaGCCGGGGTTGAGCGTCCAC | + |
Preference number: 4 (lower is better) Translates to: ETLVLKREPPDTRQYSLTPVHSS*PGLSVH Trigger: GTGGACGCTCAACCCCGGCCATGATGAATGGACAGG...TGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | CATTTGGCTCGCTGCTCCTTCCACCCCAAGATGAACAGCGCAAGGATCACAGGACCTGAGAAGCAAAGCTaGCATTGCAGCCACCAACTA | + |
Preference number: 4 (lower is better) Translates to: HLARCSFHPKMNSARITGPEKQS*HCSHQL Trigger: TAGTTGGTGGCTGCAATGCCAGCTTTGCTTCTCAGG...TCCTGTGATCCTTGCGCTGTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR CAA 72 bp | GGGGTTGACTGTAATGTGCAACTTTCCCTAAGCCCATaGTCAGTGACTAAGACTGCAGGTGTCCCCGCGTGT | + |
Preference number: 4 (lower is better) Translates to: GVDCNVQLSLSP*SVTKTAGVPAC Trigger: ACACGCGGGGACACCTGCAGTCTTAGTCACTGACAATGGGCTTAGGGAAAGTTGCACATTACAGTCAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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CDS-3UTR TCA 90 bp | CAGCAGCCTCTCACAGATTATAGCTCCCTCTTAGCCTTTTCTGTTCCTCTGTCGCGCTGTAGCCAACTCTaGCTGGTTGACGGGGTGTTA | + |
Preference number: 4 (lower is better) Translates to: QQPLTDYSSLLAFSVPLSRCSQL*LVDGVL Trigger: TAACACCCCGTCAACCAGTCAGAGTTGGCTACAGCG...CGACAGAGGAACAGAAAAGGCTAAGAGGGAGCTATAATCTGTGAGAGGCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | GTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTGTTCTGGCTAGAAACTTTTaGGGAGTTCTGCTGACTGAA | + |
Preference number: 4 (lower is better) Translates to: VSVLPQRLSGRTPAQCFVLARNF*GVLLTE Trigger: TTCAGTCAGCAGAACTCCTCAAAAGTTTCTAGCCAG...AACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | GAGAGAGAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATATGCTTGAAGCAGTCGTaGTCCCCTGTCCATTCATCA | + |
Preference number: 4 (lower is better) Translates to: ERERDPSPEKGATRHTAICLKQS*SPVHSS Trigger: TGATGAATGGACAGGGGAGCACGACTGCTTCAAGCA...TATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTCTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | TGGGTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTGGGTGTTATACACCTTaGAACCTTTCCACAAGCAAA | + |
Preference number: 4 (lower is better) Translates to: WVSVLPQRLSGRTPAQCFGCYTP*NLSTSK Trigger: TTTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCC...AAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | CCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATCCTGTCCATTCATCATaGCCGGGGTTGAGCGTCCAC | + |
Preference number: 4 (lower is better) Translates to: PSPEKGATRHTAILFNSDPVHSS*PGLSVH Trigger: GTGGACGCTCAACCCCGGCCATGATGAATGGACAGG...ATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | GAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCTCAGACCCCTGTCCATTCATCATaGCCGGGGTTGAGCGTCCAC | + |
Preference number: 4 (lower is better) Translates to: EKGATRHTAILFNSDSQTPVHSS*PGLSVH Trigger: GTGGACGCTCAACCCCGGCCATGATGAATGGACAGG...GGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | GCCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGAGTGGTCTGCCAGGTCTaGGCTGGAGTTGAAGCATGC | + |
Preference number: 4 (lower is better) Translates to: AINFYYGSPSSLRDFLEGVVCQV*AGVEAC Trigger: GCATGCTTCAACTCCAGCCCAGACCTGGCAGACCAC...TCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | CCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCTCAGGTGGTCTGCCAGGTCTaGGCTGGAGTTGAAGCATGC | + |
Preference number: 4 (lower is better) Translates to: PEKGATRHTAILFNSDSQVVCQV*AGVEAC Trigger: GCATGCTTCAACTCCAGCCCAGACCTGGCAGACCAC...CTGAGAATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | GGAGTGAGGACTCCAAGGAAGGAGTGCTTTCTGCAGCCTGACTGCATAGCAGGCTCTTTGGCCTTTGGCTaGCTAGAAACTTTTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: GVRTPRKECFLQPDCIAGSLAFG*LETFEE Trigger: CTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGA...GCCTGCTATGCAGTCAGGCTGCAGAAAGCACTCCTTCCTTGGAGTCCTCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | GGTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTGTTGTTCTGTAAATGTTTaGGTCCAACAGCAAGGCAGT | + |
Preference number: 4 (lower is better) Translates to: GLRPPSETFWKDARPMLCCSVNV*VQQQGS Trigger: ACTGCCTTGCTGTTGGACCCAAACATTTACAGAACA...ACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | CTCGCTTCAGACCACGTGACTCCCAGGCATGGAACTCAGGCCACCATGCCTGTTTGTTCTGTAAATGTTTaGGTCCAACAGCAAGGCAGT | + |
Preference number: 4 (lower is better) Translates to: LASDHVTPRHGTQATMPVCSVNV*VQQQGS Trigger: ACTGCCTTGCTGTTGGACCCAAACATTTACAGAACA...AACAGGCATGGTGGCCTGAGTTCCATGCCTGGGAGTCACGTGGTCTGAAGCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CCA 90 bp | TTTTGTTCTGTAACTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAACGCCCCGCGGTCCCTTaGGCTCCTCCAGGCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: FCSVTFSEREAFLCSPVKRPAVP*APPGPP Trigger: AGGAGGGCCTGGAGGAGCCCAAGGGACCGCGGGGCG...TTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAGTTACAGAACAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | TTGGGGCAGAAACAACCCAGGTCCACCATAAATGTCATATACAGACAGGCAGAGAACACCCCTCCACGCTaGCCATCGACATGTATGGAG | + |
Preference number: 4 (lower is better) Translates to: LGQKQPRSTINVIYRQAENTPPR*PSTCME Trigger: CTCCATACATGTCGATGGTCAGCGTGGAGGGGTGTT...CTCTGCCTGTCTGTATATGACATTTATGGTGGACCTGGGTTGTTTCTGCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR TCA 90 bp | GCCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGAAACACCCCTCCACGCTaGCCATCGACATGTATGGAG | + |
Preference number: 4 (lower is better) Translates to: AINFYYGSPSSLRDFLEGNTPPR*PSTCME Trigger: CTCCATACATGTCGATGGTCAGCGTGGAGGGGTGTT...TCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | GAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTCCAACTCTGACTGGTTaGCGGGGTGTTATACACCTT | + |
Preference number: 4 (lower is better) Translates to: ERDPSPEKGATRHTAILFPTLTG*RGVIHL Trigger: AAGGTGTATAACACCCCGTCAACCAGTCAGAGTTGG...AAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | GCCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGACGCTGTAGCCAACTCTaGCTGGTTGACGGGGTGTTA | + |
Preference number: 4 (lower is better) Translates to: AINFYYGSPSSLRDFLEGRCSQL*LVDGVL Trigger: TAACACCCCGTCAACCAGTCAGAGTTGGCTACAGCG...TCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | GAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCTCAGACCCGCTGTAGCCAACTCTaGCTGGTTGACGGGGTGTTA | + |
Preference number: 4 (lower is better) Translates to: EKGATRHTAILFNSDSQTRCSQL*LVDGVL Trigger: TAACACCCCGTCAACCAGTCAGAGTTGGCTACAGCG...GGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCGAGCTAGCCCTCCCTaGGAAGCAAAGCTGGCATTG | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVIRASPP*EAKLAL Trigger: CAATGCCAGCTTTGCTTCTCAGGGAGGGCTAGCTCG...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | GACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTAGGAGTTCTGCTGACTaGAGTGTGTGGGTACATGGC | + |
Preference number: 4 (lower is better) Translates to: DPSPEKGATRHTAILFNSRSSAD*SVWVHG Trigger: GCCATGTACCCACACACTTCAGTCAGCAGAACTCCT...ACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | GACAATTCTCCGGTCTGTTCTCGCTTCAGACCACGTGACTCCCAGGCATGGAACCCTAGACTTTCTATGTaGGCAGAGAGGTTAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: DNSPVCSRFRPRDSQAWNPRLSM*AERLKQ Trigger: CTGCTTTAACCTCTCTGCTCACATAGAAAGTCTAGG...GTTCCATGCCTGGGAGTCACGTGGTCTGAAGCGAGAACAGACCGGAGAATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR TCA 90 bp | TCCGCAGTGCTTCCCCCTCGTCCCTCAGGCTCCATGACTGTTCCATGCCTACCTACTTTCGTTTTTAACTaGTGTCGTTCACTCTCATTC | + |
Preference number: 4 (lower is better) Translates to: SAVLPPRPSGSMTVPCLPTFVFN*CRSLSF Trigger: GAATGAGAGTGAACGACATCAGTTAAAAACGAAAGT...AGGTAGGCATGGAACAGTCATGGAGCCTGAGGGACGAGGGGGAAGCACTGCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | GAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTTGCTTGAAGCAGTCGTaGTCCCCTGTCCATTCATCA | + |
Preference number: 4 (lower is better) Translates to: ERDPSPEKGATRHTAILFCLKQS*SPVHSS Trigger: TGATGAATGGACAGGGGAGCACGACTGCTTCAAGCA...AAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | TGTCTCCTCCACTTCCACCTACAAGGAGGGCAGAGAGTATGCCACAGAGCACATGGCATCCAGTGTTTGTaGATCGAAGAAATCGTGTGG | + |
Preference number: 4 (lower is better) Translates to: CLLHFHLQGGQRVCHRAHGIQCL*IEEIVW Trigger: CCACACGATTTCTTCGATGCACAAACACTGGATGCC...ATGTGCTCTGTGGCATACTCTCTGCCCTCCTTGTAGGTGGAAGTGGAGGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
||
CDS-3UTR GCA 90 bp | GAGAGAGAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATAGGCATCCAGTGTTTGTaGATCGAAGAAATCGTGTGG | + |
Preference number: 4 (lower is better) Translates to: ERERDPSPEKGATRHTAIGIQCL*IEEIVW Trigger: CCACACGATTTCTTCGATGCACAAACACTGGATGCC...TATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | GAGAGAGAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATAGGGTTGAGCGTCCACTaGAAATTGTGCTGTCTATGT | + |
Preference number: 4 (lower is better) Translates to: ERERDPSPEKGATRHTAIGLSVH*KLCCLC Trigger: ACATAGACAGCACAATTTCCAGTGGACGCTCAACCC...TATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTCTCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTGTGGTCTGCCAGGTCTaGGCTGGAGTTGAAGCATGC | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVIVVCQV*AGVEAC Trigger: GCATGCTTCAACTCCAGCCCAGACCTGGCAGACCAC...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
||
3UTR CAA 72 bp | AGCAGGGCCTATGGTCTGTACTGTCCAGACATGGATTaGGGGCAGAAACAACCCAGGTCCACCATAAATGTC | + |
Preference number: 4 (lower is better) Translates to: SRAYGLYCPDMD*GQKQPRSTINV Trigger: GACATTTATGGTGGACCTGGGTTGTTTCTGCCCCAAATCCATGTCTGGACAGTACAGACCATAGGCCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CAA 72 bp | GGATATCACTCGGGCCTTGAACTCTTGGAAATCCTCTaGCTTCGTCCTCCCAAATGCAGGGCTTTAGTCAGC | + |
Preference number: 4 (lower is better) Translates to: GYHSGLELLEIL*LRPPKCRALVS Trigger: GCTGACTAAAGCCCTGCATTTGGGAGGACGAAGCAAGAGGATTTCCAAGAGTTCAAGGCCCGAGTGATATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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3UTR CAA 72 bp | TTTATTCTGTCTGTCAGTAAAGGCAGATACCATCCCTaGCTAAGCTCAACCCCCAGTGTCCCCTGCGCTGCA | + |
Preference number: 4 (lower is better) Translates to: FILSVSKGRYHP*LSSTPSVPCAA Trigger: TGCAGCGCAGGGGACACTGGGGGTTGAGCTTAGCAAGGGATGGTATCTGCCTTTACTGACAGACAGAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CAA 72 bp | TCGCCAGTTAAATTTCAACCCAACTCCTCCAAGCATTaGGCTCGCTGCTCCTTCCACCCCAAGATGAACAGC | + |
Preference number: 4 (lower is better) Translates to: SPVKFQPNSSKH*ARCSFHPKMNS Trigger: GCTGTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATGCTTGGAGGAGTTGGGTTGAAATTTAACTGGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | AAGGAGGGCAGAGAGTATGCCACAGAGCACATAACACACAGGGCACATAACACACCAACTCTGACTGGTTaGCGGGGTGTTATACACCTT | + |
Preference number: 4 (lower is better) Translates to: KEGREYATEHITHRAHNTPTLTG*RGVIHL Trigger: AAGGTGTATAACACCCCGTCAACCAGTCAGAGTTGG...TGTGTTATGTGCCCTGTGTGTTATGTGCTCTGTGGCATACTCTCTGCCCTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCGCTGTAGCCAACTCTaGCTGGTTGACGGGGTGTTA | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVIRCSQL*LVDGVL Trigger: TAACACCCCGTCAACCAGTCAGAGTTGGCTACAGCG...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | TCCTTTTTGGTTTGTTTGCCTCAGGATATCACTCGGGCCTTGAACTCTTGGAAACGAGCTAGCCCTCCCTaGGAAGCAAAGCTGGCATTG | + |
Preference number: 4 (lower is better) Translates to: SFLVCLPQDITRALNSWKRASPP*EAKLAL Trigger: CAATGCCAGCTTTGCTTCTCAGGGAGGGCTAGCTCG...TTTCCAAGAGTTCAAGGCCCGAGTGATATCCTGAGGCAAACAAACCAAAAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR TCA 90 bp | TATACTACTGTGGCCAACCCGAAGGGACTTCTCCACACCTGTTTGTCTCCTCCATTTGAGGAGTTCTGCTaGCTGAAGTGTGTGGGTACA | + |
Preference number: 4 (lower is better) Translates to: YTTVANPKGLLHTCLSPPFEEFC*LKCVGT Trigger: TGTACCCACACACTTCAGTCAGCAGAACTCCTCAAA...TGGAGGAGACAAACAGGTGTGGAGAAGTCCCTTCGGGTTGGCCACAGTAGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | GAGAGAGAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTGGCTAGAAACTTTTaGGGAGTTCTGCTGACTGAA | + |
Preference number: 4 (lower is better) Translates to: ERERDPSPEKGATRHTAILARNF*GVLLTE Trigger: TTCAGTCAGCAGAACTCCTCAAAAGTTTCTAGCCAG...TATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | GAACTCTTGGAAATCCTCTTGCTTCGTCCTCCCAAATGCAGGGCTTTAGTCAGCTGCTTGAAGCAGTCGTaGTCCCCTGTCCATTCATCA | + |
Preference number: 4 (lower is better) Translates to: ELLEILLLRPPKCRALVSCLKQS*SPVHSS Trigger: TGATGAATGGACAGGGGAGCACGACTGCTTCAAGCA...GCTGACTAAAGCCCTGCATTTGGGAGGACGAAGCAAGAGGATTTCCAAGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR GCA 90 bp | GAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAAGCAAAGCTGGCATTaGAGCCACCAACTACACACT | + |
Preference number: 4 (lower is better) Translates to: ERDPSPEKGATRHTAILFKQSWH*SHQLHT Trigger: AGTGTGTAGTTGGTGGCTGCAATGCCAGCTTTGCTT...AAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | CCCAACAGTAAGGAACAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTGGCATCCAGTGTTTGTaGATCGAAGAAATCGTGTGG | + |
Preference number: 4 (lower is better) Translates to: PNSKEQRLSHCQRECHKLGIQCL*IEEIVW Trigger: CCACACGATTTCTTCGATGCACAAACACTGGATGCC...AAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTGTTCCTTACTGTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | GAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTGGCATCCAGTGTTTGTaGATCGAAGAAATCGTGTGG | + |
Preference number: 4 (lower is better) Translates to: ERDPSPEKGATRHTAILFGIQCL*IEEIVW Trigger: CCACACGATTTCTTCGATGCACAAACACTGGATGCC...AAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | CTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTACACCACGCTACTGCTaGTGCTACCGCCACCGCTGC | + |
Preference number: 4 (lower is better) Translates to: LFLREKPFCVRQLNFNPTTPRYC*CYRHRC Trigger: GCAGCGGTGGCGGTAGCAGCAGCAGTAGCGTGGTGT...AGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR GCA 90 bp | GAGAGAGAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATAGTCCACTGGAAATTGTaGTGTCTATGTCCATTAGCG | + |
Preference number: 4 (lower is better) Translates to: ERERDPSPEKGATRHTAIVHWKL*CLCPLA Trigger: CGCTAATGGACATAGACAGCACAATTTCCAGTGGAC...TATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR CCA 90 bp | CAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTCTATTATGGGTCTCCGGGTTGAGCGTCCACTaGAAATTGTGCTGTCTATGT | + |
Preference number: 4 (lower is better) Translates to: QRLSHCQRECHKLLLWVSGLSVH*KLCCLC Trigger: ACATAGACAGCACAATTTCCAGTGGACGCTCAACCC...GGAGACCCATAATAGAAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | TATACTACTGTGGCCAACCCGAAGGGACTTCTCCACACCTGTTTGTCTCCTCCAGGGTTGAGCGTCCACTaGAAATTGTGCTGTCTATGT | + |
Preference number: 4 (lower is better) Translates to: YTTVANPKGLLHTCLSPPGLSVH*KLCCLC Trigger: ACATAGACAGCACAATTTCCAGTGGACGCTCAACCC...TGGAGGAGACAAACAGGTGTGGAGAAGTCCCTTCGGGTTGGCCACAGTAGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CCA 90 bp | GAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTGGGTTGAGCGTCCACTaGAAATTGTGCTGTCTATGT | + |
Preference number: 4 (lower is better) Translates to: ERDPSPEKGATRHTAILFGLSVH*KLCCLC Trigger: ACATAGACAGCACAATTTCCAGTGGACGCTCAACCC...AAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTGAGTTGAAGCATGCCTaGCACTGGTCCCAGCAACAG | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVIELKHA*HWSQQQ Trigger: CTGTTGCTGGGACCAGTGCCAGGCATGCTTCAACTC...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | GACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTCCTGAGAAGCAAAGCTaGCATTGCAGCCACCAACTA | + |
Preference number: 4 (lower is better) Translates to: DPSPEKGATRHTAILFNSPEKQS*HCSHQL Trigger: TAGTTGGTGGCTGCAATGCCAGCTTTGCTTCTCAGG...ACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | GAGAGAGAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATATGGCTCGATGTCTTATaGCATCCAGTGTTTGTGCAT | + |
Preference number: 4 (lower is better) Translates to: ERERDPSPEKGATRHTAIWLDVL*HPVFVH Trigger: ATGCACAAACACTGGATGCCATAAGACATCGAGCCA...TATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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3UTR CAA 72 bp | AGTTGCCCACAGCACCGTACTGACAGGACAAACACTTaGTCAGTGATTTTGTGTGGAGTACAATCCTGGCGG | + |
Preference number: 4 (lower is better) Translates to: SCPQHRTDRTNT*SVILCGVQSWR Trigger: CCGCCAGGATTGTACTCCACACAAAATCACTGACAAAGTGTTTGTCCTGTCAGTACGGTGCTGTGGGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CAA 72 bp | GGGGGTGTCAATCTTCCAGATGCCTCCATATCATTCTaGCTGCGAAACCGGTTAAAGCCATGCCTTAGACTG | + |
Preference number: 4 (lower is better) Translates to: GGVNLPDASISF*LRNRLKPCLRL Trigger: CAGTCTAAGGCATGGCTTTAACCGGTTTCGCAGCAAGAATGATATGGAGGCATCTGGAAGATTGACACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | AAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTCCTCCAAGCATTTGGAACACCCCTCCACGCTaGCCATCGACATGTATGGAG | + |
Preference number: 4 (lower is better) Translates to: KPFCVRQLNFNPTPPSIWNTPPR*PSTCME Trigger: CTCCATACATGTCGATGGTCAGCGTGGAGGGGTGTT...CCAAATGCTTGGAGGAGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTAGGAGTTCTGCTGACTaGAGTGTGTGGGTACATGGC | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVIRSSAD*SVWVHG Trigger: GCCATGTACCCACACACTTCAGTCAGCAGAACTCCT...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | GACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTAAGCAAAGCTGGCATTaGAGCCACCAACTACACACT | + |
Preference number: 4 (lower is better) Translates to: DPSPEKGATRHTAILFNSKQSWH*SHQLHT Trigger: AGTGTGTAGTTGGTGGCTGCAATGCCAGCTTTGCTT...ACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | ATAACACACAGGGCACATAACACACACAAAGCCTGCAGTTGCAGTGAAATTAAGCCTGTCCATTCATCATaGCCGGGGTTGAGCGTCCAC | + |
Preference number: 4 (lower is better) Translates to: ITHRAHNTHKACSCSEIKPVHSS*PGLSVH Trigger: GTGGACGCTCAACCCCGGCCATGATGAATGGACAGG...CTTAATTTCACTGCAACTGCAGGCTTTGTGTGTGTTATGTGCCCTGTGTGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CCA 90 bp | TATACTACTGTGGCCAACCCGAAGGGACTTCTCCACACCTGTTTGTCTCCTCCATCTTTGGCCTTTGGCTaGCTAGAAACTTTTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: YTTVANPKGLLHTCLSPPSLAFG*LETFEE Trigger: CTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGA...TGGAGGAGACAAACAGGTGTGGAGAAGTCCCTTCGGGTTGGCCACAGTAGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CCA 90 bp | TGTCTCCTCCACTTCCACCTACAAGGAGGGCAGAGAGTATGCCACAGAGCACATTGTTCTGTAAATGTTTaGGTCCAACAGCAAGGCAGT | + |
Preference number: 4 (lower is better) Translates to: CLLHFHLQGGQRVCHRAHCSVNV*VQQQGS Trigger: ACTGCCTTGCTGTTGGACCCAAACATTTACAGAACA...ATGTGCTCTGTGGCATACTCTCTGCCCTCCTTGTAGGTGGAAGTGGAGGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | GAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCTCAGACCTTTGAGGAGTTCTGCTaGCTGAAGTGTGTGGGTACA | + |
Preference number: 4 (lower is better) Translates to: EKGATRHTAILFNSDSQTFEEFC*LKCVGT Trigger: TGTACCCACACACTTCAGTCAGCAGAACTCCTCAAA...GGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | GAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACACTGGCTAGAAACTTTTaGGGAGTTCTGCTGACTGAA | + |
Preference number: 4 (lower is better) Translates to: ETLVLKREPPDTRQYSLTLARNF*GVLLTE Trigger: TTCAGTCAGCAGAACTCCTCAAAAGTTTCTAGCCAG...TGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | GACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTCCTAGACTTTCTATGTaGGCAGAGAGGTTAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: DPSPEKGATRHTAILFNSPRLSM*AERLKQ Trigger: CTGCTTTAACCTCTCTGCTCACATAGAAAGTCTAGG...ACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | GAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACACCTAGACTTTCTATGTaGGCAGAGAGGTTAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: ETLVLKREPPDTRQYSLTPRLSM*AERLKQ Trigger: CTGCTTTAACCTCTCTGCTCACATAGAAAGTCTAGG...TGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | TGTCAATCTTCCAGATGCCTCCATATCATTCTTGCTGCGAAACCGGTTAAAGCCTGCTTGAAGCAGTCGTaGTCCCCTGTCCATTCATCA | + |
Preference number: 4 (lower is better) Translates to: CQSSRCLHIILAAKPVKACLKQS*SPVHSS Trigger: TGATGAATGGACAGGGGAGCACGACTGCTTCAAGCA...GGCTTTAACCGGTTTCGCAGCAAGAATGATATGGAGGCATCTGGAAGATTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR GCA 90 bp | GAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTGGGTGTTATACACCTTaGAACCTTTCCACAAGCAAA | + |
Preference number: 4 (lower is better) Translates to: ERDPSPEKGATRHTAILFGCYTP*NLSTSK Trigger: TTTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCC...AAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | CCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATGGCATCCAGTGTTTGTaGATCGAAGAAATCGTGTGG | + |
Preference number: 4 (lower is better) Translates to: PSPEKGATRHTAILFNSDGIQCL*IEEIVW Trigger: CCACACGATTTCTTCGATGCACAAACACTGGATGCC...ATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | CTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTGTGGTCTGCCAGGTCTaGGCTGGAGTTGAAGCATGC | + |
Preference number: 4 (lower is better) Translates to: LFLREKPFCVRQLNFNPTVVCQV*AGVEAC Trigger: GCATGCTTCAACTCCAGCCCAGACCTGGCAGACCAC...AGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCCTGAGAAGCAAAGCTaGCATTGCAGCCACCAACTA | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVIPEKQS*HCSHQL Trigger: TAGTTGGTGGCTGCAATGCCAGCTTTGCTTCTCAGG...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | AAATTTAGAGTAAAAACTGCTGGTATTGCTGTCACTGTAGGGAGTGAGGACTCCAGGAGTTCTGCTGACTaGAGTGTGTGGGTACATGGC | + |
Preference number: 4 (lower is better) Translates to: KFRVKTAGIAVTVGSEDSRSSAD*SVWVHG Trigger: GCCATGTACCCACACACTTCAGTCAGCAGAACTCCT...GGAGTCCTCACTCCCTACAGTGACAGCAATACCAGCAGTTTTTACTCTAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTTTTGAGGAGTTCTGCTaGCTGAAGTGTGTGGGTACA | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVIFEEFC*LKCVGT Trigger: TGTACCCACACACTTCAGTCAGCAGAACTCCTCAAA...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
||
CDS-3UTR TCA 90 bp | CCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATCTGGCTAGAAACTTTTaGGGAGTTCTGCTGACTGAA | + |
Preference number: 4 (lower is better) Translates to: PSPEKGATRHTAILFNSDLARNF*GVLLTE Trigger: TTCAGTCAGCAGAACTCCTCAAAAGTTTCTAGCCAG...ATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | CTTTCCTTTTTGGTTTGTTTGCCTCAGGATATCACTCGGGCCTTGAACTCTTGGGGCATCCAGTGTTTGTaGATCGAAGAAATCGTGTGG | + |
Preference number: 4 (lower is better) Translates to: LSFLVCLPQDITRALNSWGIQCL*IEEIVW Trigger: CCACACGATTTCTTCGATGCACAAACACTGGATGCC...CCAAGAGTTCAAGGCCCGAGTGATATCCTGAGGCAAACAAACCAAAAAGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CCA 90 bp | TACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGGAAGACAATTCTCCGGAGTTGAAGCATGCCTaGCACTGGTCCCAGCAACAG | + |
Preference number: 4 (lower is better) Translates to: YLCRRSFAHLLVGEDNSPELKHA*HWSQQQ Trigger: CTGTTGCTGGGACCAGTGCCAGGCATGCTTCAACTC...CGGAGAATTGTCTTCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR CCA 90 bp | CTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTGTTCTTAGACATTAACTCTTTGGCCTTTGGCTaGCTAGAAACTTTTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: LRDFLEGRPPNALFLDINSLAFG*LETFEE Trigger: CTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGA...GTTAATGTCTAAGAACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | GAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCTCAGACCTCTTTGGCCTTTGGCTaGCTAGAAACTTTTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: EKGATRHTAILFNSDSQTSLAFG*LETFEE Trigger: CTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGA...GGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | TCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTGTTCTTAGACGCAAGGCAGTATCTTTaGGTAGCTTTGATAAATGAA | + |
Preference number: 4 (lower is better) Translates to: SSLRDFLEGRPPNALFLDARQYL*VALINE Trigger: TTCATTTATCAAAGCTACCCAAAGATACTGCCTTGC...GTCTAAGAACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | GAACTCTTGGAAATCCTCTTGCTTCGTCCTCCCAAATGCAGGGCTTTAGTCAGCTGTTCTGTAAATGTTTaGGTCCAACAGCAAGGCAGT | + |
Preference number: 4 (lower is better) Translates to: ELLEILLLRPPKCRALVSCSVNV*VQQQGS Trigger: ACTGCCTTGCTGTTGGACCCAAACATTTACAGAACA...GCTGACTAAAGCCCTGCATTTGGGAGGACGAAGCAAGAGGATTTCCAAGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CCA 90 bp | GAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACATGTTCTGTAAATGTTTaGGTCCAACAGCAAGGCAGT | + |
Preference number: 4 (lower is better) Translates to: ETLVLKREPPDTRQYSLTCSVNV*VQQQGS Trigger: ACTGCCTTGCTGTTGGACCCAAACATTTACAGAACA...TGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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3UTR CAA 72 bp | TCCCTTCAGTCTGCAGACATCTCTCCTAAAGGTGCTTaGTTAGCAATCCCTCTGGCAGCACTAGTGAATTAC | + |
Preference number: 4 (lower is better) Translates to: SLQSADISPKGA*LAIPLAALVNY Trigger: GTAATTCACTAGTGCTGCCAGAGGGATTGCTAACAAAGCACCTTTAGGAGAGATGTCTGCAGACTGAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR CAA 72 bp | CTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTaGTTCTTAGACATTAACAGTAGTACACAGTCCCTT | + |
Preference number: 4 (lower is better) Translates to: LRDFLEGRPPNA*FLDINSSTQSL Trigger: AAGGGACTGTGTACTACTGTTAATGTCTAAGAACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR CAA 72 bp | TTTTTGGTTTGTTTGCCTCAGGATATCACTCGGGCCTaGAACTCTTGGAAATCCTCTTGCTTCGTCCTCCCA | + |
Preference number: 4 (lower is better) Translates to: FLVCLPQDITRA*NSWKSSCFVLP Trigger: TGGGAGGACGAAGCAAGAGGATTTCCAAGAGTTCAAGGCCCGAGTGATATCCTGAGGCAAACAAACCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR TCA 90 bp | AAATTTAGAGTAAAAACTGCTGGTATTGCTGTCACTGTAGGGAGTGAGGACTCCCCAACTCTGACTGGTTaGCGGGGTGTTATACACCTT | + |
Preference number: 4 (lower is better) Translates to: KFRVKTAGIAVTVGSEDSPTLTG*RGVIHL Trigger: AAGGTGTATAACACCCCGTCAACCAGTCAGAGTTGG...GGAGTCCTCACTCCCTACAGTGACAGCAATACCAGCAGTTTTTACTCTAAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | AACTCTGGCAAATTCTACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGCGCTGTAGCCAACTCTaGCTGGTTGACGGGGTGTTA | + |
Preference number: 4 (lower is better) Translates to: NSGKFYLCRRSFAHLLVGRCSQL*LVDGVL Trigger: TAACACCCCGTCAACCAGTCAGAGTTGGCTACAGCG...CCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCCAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR TCA 90 bp | ACACGGCAATACTCTTTAACAGTGATTCTCAGACCTAATTCGATAGACGAATTTCGAGCTAGCCCTCCCTaGGAAGCAAAGCTGGCATTG | + |
Preference number: 4 (lower is better) Translates to: TRQYSLTVILRPNSIDEFRASPP*EAKLAL Trigger: CAATGCCAGCTTTGCTTCTCAGGGAGGGCTAGCTCG...AAATTCGTCTATCGAATTAGGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | TGTCAATCTTCCAGATGCCTCCATATCATTCTTGCTGCGAAACCGGTTAAAGCCCCTAGACTTTCTATGTaGGCAGAGAGGTTAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: CQSSRCLHIILAAKPVKAPRLSM*AERLKQ Trigger: CTGCTTTAACCTCTCTGCTCACATAGAAAGTCTAGG...GGCTTTAACCGGTTTCGCAGCAAGAATGATATGGAGGCATCTGGAAGATTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR GCA 90 bp | ATATTAACACGCTGTCCCCATGAGAGAGAGAGAGAGACCCTAGTCCTGAAAAGGGGGTGTTATACACCTTaGAACCTTTCCACAAGCAAA | + |
Preference number: 4 (lower is better) Translates to: ILTRCPHERERETLVLKRGCYTP*NLSTSK Trigger: TTTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCC...CCTTTTCAGGACTAGGGTCTCTCTCTCTCTCTCATGGGGACAGCGTGTTAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | AGTGCCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTTTCTGGAATCTTTGGCCTTTGGCTaGCTAGAAACTTTTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: SAINFYYGSPSSLRDFLESLAFG*LETFEE Trigger: CTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGA...TTCCAGAAAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTTGGCTCGATGTCTTATaGCATCCAGTGTTTGTGCAT | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVIWLDVL*HPVFVH Trigger: ATGCACAAACACTGGATGCCATAAGACATCGAGCCA...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | ACACGGCAATACTCTTTAACAGTGATTCTCAGACCTAATTCGATAGACGAATTTAACACCCCTCCACGCTaGCCATCGACATGTATGGAG | + |
Preference number: 4 (lower is better) Translates to: TRQYSLTVILRPNSIDEFNTPPR*PSTCME Trigger: CTCCATACATGTCGATGGTCAGCGTGGAGGGGTGTT...AAATTCGTCTATCGAATTAGGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | ACATTAACAGTAGTACACAGTCCCTTCAGTCTGCAGACATCTCTCCTAAAGGTGCCTAGACTTTCTATGTaGGCAGAGAGGTTAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: TLTVVHSPFSLQTSLLKVPRLSM*AERLKQ Trigger: CTGCTTTAACCTCTCTGCTCACATAGAAAGTCTAGG...CACCTTTAGGAGAGATGTCTGCAGACTGAAGGGACTGTGTACTACTGTTAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR GCA 90 bp | TTGAGTACAAACTGTGTGGTCTGTGTTCACTGCTCCAAAAATGTTACCAGCTACAAGCAAAGCTGGCATTaGAGCCACCAACTACACACT | + |
Preference number: 4 (lower is better) Translates to: LSTNCVVCVHCSKNVTSYKQSWH*SHQLHT Trigger: AGTGTGTAGTTGGTGGCTGCAATGCCAGCTTTGCTT...GTAGCTGGTAACATTTTTGGAGCAGTGAACACAGACCACACAGTTTGTACTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR GCA 90 bp | ATAACACACAGGGCACATAACACACACAAAGCCTGCAGTTGCAGTGAAATTAAGAAGCAAAGCTGGCATTaGAGCCACCAACTACACACT | + |
Preference number: 4 (lower is better) Translates to: ITHRAHNTHKACSCSEIKKQSWH*SHQLHT Trigger: AGTGTGTAGTTGGTGGCTGCAATGCCAGCTTTGCTT...CTTAATTTCACTGCAACTGCAGGCTTTGTGTGTGTTATGTGCCCTGTGTGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CCA 90 bp | ACACGGCAATACTCTTTAACAGTGATTCTCAGACCTAATTCGATAGACGAATTTGAGTTGAAGCATGCCTaGCACTGGTCCCAGCAACAG | + |
Preference number: 4 (lower is better) Translates to: TRQYSLTVILRPNSIDEFELKHA*HWSQQQ Trigger: CTGTTGCTGGGACCAGTGCCAGGCATGCTTCAACTC...AAATTCGTCTATCGAATTAGGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | TTTTGTTCTGTAACTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAAGAGTTGAAGCATGCCTaGCACTGGTCCCAGCAACAG | + |
Preference number: 4 (lower is better) Translates to: FCSVTFSEREAFLCSPVKELKHA*HWSQQQ Trigger: CTGTTGCTGGGACCAGTGCCAGGCATGCTTCAACTC...TTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAGTTACAGAACAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTTGTTCTGTAAATGTTTaGGTCCAACAGCAAGGCAGT | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVICSVNV*VQQQGS Trigger: ACTGCCTTGCTGTTGGACCCAAACATTTACAGAACA...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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3UTR CAA 72 bp | ACCACATATGTTTATGTATCTCTGCAACCTGAGGTCTaGTCAGACACATCACTGTGTCAGGCTTTCTACTCG | + |
Preference number: 4 (lower is better) Translates to: TTYVYVSLQPEV*SDTSLCQAFYS Trigger: CGAGTAGAAAGCCTGACACAGTGATGTGTCTGACAAGACCTCAGGTTGCAGAGATACATAAACATATGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR TCA 90 bp | ATAACACACAGGGCACATAACACACACAAAGCCTGCAGTTGCAGTGAAATTAAGCTGGCTAGAAACTTTTaGGGAGTTCTGCTGACTGAA | + |
Preference number: 4 (lower is better) Translates to: ITHRAHNTHKACSCSEIKLARNF*GVLLTE Trigger: TTCAGTCAGCAGAACTCCTCAAAAGTTTCTAGCCAG...CTTAATTTCACTGCAACTGCAGGCTTTGTGTGTGTTATGTGCCCTGTGTGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | ATATTAACACGCTGTCCCCATGAGAGAGAGAGAGAGACCCTAGTCCTGAAAAGGACTTTCGTTTTTAACTaGTGTCGTTCACTCTCATTC | + |
Preference number: 4 (lower is better) Translates to: ILTRCPHERERETLVLKRTFVFN*CRSLSF Trigger: GAATGAGAGTGAACGACATCAGTTAAAAACGAAAGT...CCTTTTCAGGACTAGGGTCTCTCTCTCTCTCTCATGGGGACAGCGTGTTAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | AACTCTGGCAAATTCTACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGCCTGAGAAGCAAAGCTaGCATTGCAGCCACCAACTA | + |
Preference number: 4 (lower is better) Translates to: NSGKFYLCRRSFAHLLVGPEKQS*HCSHQL Trigger: TAGTTGGTGGCTGCAATGCCAGCTTTGCTTCTCAGG...CCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCCAGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CCA 90 bp | AAATTTAGAGTAAAAACTGCTGGTATTGCTGTCACTGTAGGGAGTGAGGACTCCTGGCTCGATGTCTTATaGCATCCAGTGTTTGTGCAT | + |
Preference number: 4 (lower is better) Translates to: KFRVKTAGIAVTVGSEDSWLDVL*HPVFVH Trigger: ATGCACAAACACTGGATGCCATAAGACATCGAGCCA...GGAGTCCTCACTCCCTACAGTGACAGCAATACCAGCAGTTTTTACTCTAAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CCA 90 bp | ATAACACACAGGGCACATAACACACACAAAGCCTGCAGTTGCAGTGAAATTAAGTGGCTCGATGTCTTATaGCATCCAGTGTTTGTGCAT | + |
Preference number: 4 (lower is better) Translates to: ITHRAHNTHKACSCSEIKWLDVL*HPVFVH Trigger: ATGCACAAACACTGGATGCCATAAGACATCGAGCCA...CTTAATTTCACTGCAACTGCAGGCTTTGTGTGTGTTATGTGCCCTGTGTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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3UTR CAA 72 bp | TCTACCTTTGCAGAAGATCATTTGCACATTTACTTGTaGGGGAAGACAATTCTCCGGTCTGTTCTCGCTTCA | + |
Preference number: 4 (lower is better) Translates to: STFAEDHLHIYL*GKTILRSVLAS Trigger: TGAAGCGAGAACAGACCGGAGAATTGTCTTCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR TCA 90 bp | AACTCTGGCAAATTCTACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGTTTGAGGAGTTCTGCTaGCTGAAGTGTGTGGGTACA | + |
Preference number: 4 (lower is better) Translates to: NSGKFYLCRRSFAHLLVGFEEFC*LKCVGT Trigger: TGTACCCACACACTTCAGTCAGCAGAACTCCTCAAA...CCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCCAGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR TCA 90 bp | GGCAAATTCTACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGGAAGACCCTAGACTTTCTATGTaGGCAGAGAGGTTAAAGCAG | + |
Preference number: 4 (lower is better) Translates to: GKFYLCRRSFAHLLVGEDPRLSM*AERLKQ Trigger: CTGCTTTAACCTCTCTGCTCACATAGAAAGTCTAGG...GTCTTCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR TCA 90 bp | CTTTCCTTTTTGGTTTGTTTGCCTCAGGATATCACTCGGGCCTTGAACTCTTGGACTTTCGTTTTTAACTaGTGTCGTTCACTCTCATTC | + |
Preference number: 4 (lower is better) Translates to: LSFLVCLPQDITRALNSWTFVFN*CRSLSF Trigger: GAATGAGAGTGAACGACATCAGTTAAAAACGAAAGT...CCAAGAGTTCAAGGCCCGAGTGATATCCTGAGGCAAACAAACCAAAAAGGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CCA 90 bp | GTTAACCATGCATCAAGAAAACAGTTCAACGCAAACAACAGATCATCCATGTTTCCTGAGAAGCAAAGCTaGCATTGCAGCCACCAACTA | + |
Preference number: 4 (lower is better) Translates to: VNHASRKQFNANNRSSMFPEKQS*HCSHQL Trigger: TAGTTGGTGGCTGCAATGCCAGCTTTGCTTCTCAGG...AAACATGGATGATCTGTTGTTTGCGTTGAACTGTTTTCTTGATGCATGGTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CCA 90 bp | CTCTGGCAAATTCTACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGGATCTTTGGCCTTTGGCTaGCTAGAAACTTTTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: LWQILPLQKIICTFTCWGSLAFG*LETFEE Trigger: CTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGA...TCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CCA 90 bp | TGTAATGTGCAACTTTCCCTAAGCCCATTGTCAGTGACTAAGACTGCAGGTGTCGCAAGGCAGTATCTTTaGGTAGCTTTGATAAATGAA | + |
Preference number: 4 (lower is better) Translates to: CNVQLSLSPLSVTKTAGVARQYL*VALINE Trigger: TTCATTTATCAAAGCTACCCAAAGATACTGCCTTGC...GACACCTGCAGTCTTAGTCACTGACAATGGGCTTAGGGAAAGTTGCACATTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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CDS-3UTR CCA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTGCAAGGCAGTATCTTTaGGTAGCTTTGATAAATGAA | + |
Preference number: 4 (lower is better) Translates to: LVLKREPPDTRQYSLTVIARQYL*VALINE Trigger: TTCATTTATCAAAGCTACCCAAAGATACTGCCTTGC...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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3UTR CAA 72 bp | GGCACGCAGAGGCTAATCAACAACCAGCAGCATGGTTaGACATCACAAATTTTCTACATTGACAGTAATGAA | + |
Preference number: 4 (lower is better) Translates to: GTQRLINNQQHG*TSQIFYIDSNE Trigger: TTCATTACTGTCAATGTAGAAAATTTGTGATGTCAAACCATGCTGCTGGTTGTTGATTAGCCTCTGCGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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3UTR CAA 72 bp | AATTCTACCTTTGCAGAAGATCATTTGCACATTTACTaGTTGGGGAAGACAATTCTCCGGTCTGTTCTCGCT | + |
Preference number: 4 (lower is better) Translates to: NSTFAEDHLHIY*LGKTILRSVLA Trigger: AGCGAGAACAGACCGGAGAATTGTCTTCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR TCA 90 bp | ACACTGCTTCAACCACATTTACCCACTTTGATATTCAGTCAATATTATCTCATCCCAACTCTGACTGGTTaGCGGGGTGTTATACACCTT | + |
Preference number: 4 (lower is better) Translates to: TLLQPHLPTLIFSQYYLIPTLTG*RGVIHL Trigger: AAGGTGTATAACACCCCGTCAACCAGTCAGAGTTGG...GATGAGATAATATTGACTGAATATCAAAGTGGGTAAATGTGGTTGAAGCAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR TCA 90 bp | GTTCAACGCAAACAACAGATCATCCATGTTTTTAACTCTGGCAAATTCTACCTTTTTGAGGAGTTCTGCTaGCTGAAGTGTGTGGGTACA | + |
Preference number: 4 (lower is better) Translates to: VQRKQQIIHVFNSGKFYLFEEFC*LKCVGT Trigger: TGTACCCACACACTTCAGTCAGCAGAACTCCTCAAA...AAGGTAGAATTTGCCAGAGTTAAAAACATGGATGATCTGTTGTTTGCGTTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR GCA 90 bp | TACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGGAAGACAATTCTCCGGGGTGTTATACACCTTaGAACCTTTCCACAAGCAAA | + |
Preference number: 4 (lower is better) Translates to: YLCRRSFAHLLVGEDNSPGCYTP*NLSTSK Trigger: TTTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCC...CGGAGAATTGTCTTCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR GCA 90 bp | CTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTGGGTGTTATACACCTTaGAACCTTTCCACAAGCAAA | + |
Preference number: 4 (lower is better) Translates to: LFLREKPFCVRQLNFNPTGCYTP*NLSTSK Trigger: TTTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCC...AGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
||
CDS-3UTR CCA 90 bp | TCAGGACTTCAAATCAATACACACTGTCAAGATGGTTATCTTACAGTGCTTTTGGGGTTGAGCGTCCACTaGAAATTGTGCTGTCTATGT | + |
Preference number: 4 (lower is better) Translates to: SGLQINTHCQDGYLTVLLGLSVH*KLCCLC Trigger: ACATAGACAGCACAATTTCCAGTGGACGCTCAACCC...CAAAAGCACTGTAAGATAACCATCTTGACAGTGTGTATTGATTTGAAGTCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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CDS-3UTR CCA 90 bp | GAGAAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTCCTCCAAGCATTGCAAGGCAGTATCTTTaGGTAGCTTTGATAAATGAA | + |
Preference number: 4 (lower is better) Translates to: EKPFCVRQLNFNPTPPSIARQYL*VALINE Trigger: TTCATTTATCAAAGCTACCCAAAGATACTGCCTTGC...AATGCTTGGAGGAGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR TCA 90 bp | GTTCAACGCAAACAACAGATCATCCATGTTTTTAACTCTGGCAAATTCTACCTTCTGGCTAGAAACTTTTaGGGAGTTCTGCTGACTGAA | + |
Preference number: 4 (lower is better) Translates to: VQRKQQIIHVFNSGKFYLLARNF*GVLLTE Trigger: TTCAGTCAGCAGAACTCCTCAAAAGTTTCTAGCCAG...AAGGTAGAATTTGCCAGAGTTAAAAACATGGATGATCTGTTGTTTGCGTTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR GCA 90 bp | GCTTCAACCACATTTACCCACTTTGATATTCAGTCAATATTATCTCATCTCTTGAAGCAAAGCTGGCATTaGAGCCACCAACTACACACT | + |
Preference number: 4 (lower is better) Translates to: ASTTFTHFDIQSILSHLLKQSWH*SHQLHT Trigger: AGTGTGTAGTTGGTGGCTGCAATGCCAGCTTTGCTT...CAAGAGATGAGATAATATTGACTGAATATCAAAGTGGGTAAATGTGGTTGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR GCA 90 bp | TTTTGTTCTGTAACTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAAGTCCACTGGAAATTGTaGTGTCTATGTCCATTAGCG | + |
Preference number: 4 (lower is better) Translates to: FCSVTFSEREAFLCSPVKVHWKL*CLCPLA Trigger: CGCTAATGGACATAGACAGCACAATTTCCAGTGGAC...TTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAGTTACAGAACAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CCA 90 bp | TCATCTCTTGTTAACCATGCATCAAGAAAACAGTTCAACGCAAACAACAGATCATGGCTCGATGTCTTATaGCATCCAGTGTTTGTGCAT | + |
Preference number: 4 (lower is better) Translates to: SSLVNHASRKQFNANNRSWLDVL*HPVFVH Trigger: ATGCACAAACACTGGATGCCATAAGACATCGAGCCA...TGATCTGTTGTTTGCGTTGAACTGTTTTCTTGATGCATGGTTAACAAGAGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CCA 90 bp | GGCAAATTCTACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGGAAGACGCAAGGCAGTATCTTTaGGTAGCTTTGATAAATGAA | + |
Preference number: 4 (lower is better) Translates to: GKFYLCRRSFAHLLVGEDARQYL*VALINE Trigger: TTCATTTATCAAAGCTACCCAAAGATACTGCCTTGC...GTCTTCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR TCA 90 bp | TTTTGTTCTGTAACTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAAACTTTCGTTTTTAACTaGTGTCGTTCACTCTCATTC | + |
Preference number: 4 (lower is better) Translates to: FCSVTFSEREAFLCSPVKTFVFN*CRSLSF Trigger: GAATGAGAGTGAACGACATCAGTTAAAAACGAAAGT...TTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAGTTACAGAACAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
||
CDS-3UTR TCA 90 bp | ACACGGCAATACTCTTTAACAGTGATTCTCAGACCTAATTCGATAGACGAATTTACTTTCGTTTTTAACTaGTGTCGTTCACTCTCATTC | + |
Preference number: 4 (lower is better) Translates to: TRQYSLTVILRPNSIDEFTFVFN*CRSLSF Trigger: GAATGAGAGTGAACGACATCAGTTAAAAACGAAAGT...AAATTCGTCTATCGAATTAGGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR TCA 90 bp | AGTAAAGCTGTTACTCAAACTATTTACACTGCTTCAACCACATTTACCCACTTTACTTTCGTTTTTAACTaGTGTCGTTCACTCTCATTC | + |
Preference number: 4 (lower is better) Translates to: SKAVTQTIYTASTTFTHFTFVFN*CRSLSF Trigger: GAATGAGAGTGAACGACATCAGTTAAAAACGAAAGT...AAAGTGGGTAAATGTGGTTGAAGCAGTGTAAATAGTTTGAGTAACAGCTTTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
||
CDS-3UTR CCA 90 bp | AATACTCAAGCAAGGTCTACAATCATCGGTCAATTAATGACTTACAAGAACATGGCAAGGCAGTATCTTTaGGTAGCTTTGATAAATGAA | + |
Preference number: 4 (lower is better) Translates to: NTQARSTIIGQLMTYKNMARQYL*VALINE Trigger: TTCATTTATCAAAGCTACCCAAAGATACTGCCTTGC...CATGTTCTTGTAAGTCATTAATTGACCGATGATTGTAGACCTTGCTTGAGTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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3UTR CAA 72 bp | AATACACACTGTCAAGATGGTTATCTTACAGTGCTTTaGGTGTTTTTAAGGGCAATTGTTTGTCTCTCCAAT | + |
Preference number: 4 (lower is better) Translates to: NTHCQDGYLTVL*VFLRAIVCLSN Trigger: ATTGGAGAGACAAACAATTGCCCTTAAAAACACCAAAAGCACTGTAAGATAACCATCTTGACAGTGTGTATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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CDS GCA 90 bp | CCCCGGTGCCGTAGCCCTCGTCGCCGCCGCTCGACACCACGCTACTaGTGCTGCTACCGCCACCGCTGCTGCCCGGGCCGCCCGGGCCGC | + |
Preference number: 5 (lower is better) Translates to: PRCRSPRRRRSTPRY*CCYRHRCCPGRPGR Trigger: GCGGCCCGGGCGGCCCGGGCAGCAGCGGTGGCGGTAGCAGCAGCAGTAGCGTGGTGTCGAGCGGCGGCGACGAGGGCTACGGCACCGGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS CCA 90 bp | CCTCGTCGTCCTCCTCGTCCTCGTCCTCGTCCCCGCCCGCCTGGCTaGCGCTCTCGGGGCTCGGCTCCGACATGGTCTCCGCCTCGCCGC | + |
Preference number: 5 (lower is better) Translates to: PRRPPRPRPRPRPPG*RSRGSAPTWSPPRR Trigger: GCGGCGAGGCGGAGACCATGTCGGAGCCGAGCCCCGAGAGCGCCAGCCAGGCGGGCGGGGACGAGGACGAGGACGAGGAGGACGACGAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS GCA 90 bp | CCAGGCTCTCGGCGCTGCTCTCCTCCTCCGCGCCGCCGCTGCTGCTaGCCTCGTCCTCGTCGTCCTCCTCGTCCTCGTCCTCGTCCCCGC | + |
Preference number: 5 (lower is better) Translates to: PGSRRCSPPPRRRCC*PRPRRPPRPRPRPR Trigger: GCGGGGACGAGGACGAGGACGAGGAGGACGACGAGGACGAGGGCAGCAGCAGCGGCGGCGCGGAGGAGGAGAGCAGCGCCGAGAGCCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
||
CDS GCA 90 bp | CCACCAGGCTCTCGGCGCTGCTCTCCTCCTCCGCGCCGCCGCTGCTaGTGCCCTCGTCCTCGTCGTCCTCCTCGTCCTCGTCCTCGTCCC | + |
Preference number: 5 (lower is better) Translates to: PPGSRRCSPPPRRRC*CPRPRRPPRPRPRP Trigger: GGGACGAGGACGAGGACGAGGAGGACGACGAGGACGAGGGCAGCAGCAGCGGCGGCGCGGAGGAGGAGAGCAGCGCCGAGAGCCTGGTGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS CCA 90 bp | TCGTCCTCGTCGTCCTCCTCGTCCTCGTCCTCGTCCCCGCCCGCCTaGCTGGCGCTCTCGGGGCTCGGCTCCGACATGGTCTCCGCCTCG | + |
Preference number: 5 (lower is better) Translates to: SSSSSSSSSSSSPPA*LALSGLGSDMVSAS Trigger: CGAGGCGGAGACCATGTCGGAGCCGAGCCCCGAGAGCGCCAGCCAGGCGGGCGGGGACGAGGACGAGGACGAGGAGGACGACGAGGACGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS GCA 90 bp | TGCCCACCAGGCTCTCGGCGCTGCTCTCCTCCTCCGCGCCGCCGCTaGTGCTGCCCTCGTCCTCGTCGTCCTCCTCGTCCTCGTCCTCGT | + |
Preference number: 5 (lower is better) Translates to: CPPGSRRCSPPPRRR*CCPRPRRPPRPRPR Trigger: ACGAGGACGAGGACGAGGAGGACGACGAGGACGAGGGCAGCAGCAGCGGCGGCGCGGAGGAGGAGAGCAGCGCCGAGAGCCTGGTGGGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS GCA 90 bp | CACCCCTCCACGCTGACCATCGACATGTATGGAGCGAATGTGGTCTaGCAGGTCTGGGCTGGAGTTGAAGCATGCCTGGCACTGGTCCCA | + |
Preference number: 5 (lower is better) Translates to: HPSTLTIDMYGANVV*QVWAGVEACLALVP Trigger: TGGGACCAGTGCCAGGCATGCTTCAACTCCAGCCCAGACCTGGCAGACCACATTCGCTCCATACATGTCGATGGTCAGCGTGGAGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS CCA 90 bp | ACGCTGACCATCGACATGTATGGAGCGAATGTGGTCTGCCAGGTCTaGGCTGGAGTTGAAGCATGCCTGGCACTGGTCCCAGCAACAGTT | + |
Preference number: 5 (lower is better) Translates to: TLTIDMYGANVVCQV*AGVEACLALVPATV Trigger: AACTGTTGCTGGGACCAGTGCCAGGCATGCTTCAACTCCAGCCCAGACCTGGCAGACCACATTCGCTCCATACATGTCGATGGTCAGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | CTCGCTTCAGACCACGTGACTCCCAGGCATGGAACTCAGGCCACCATGCCTGTTGCCAACTCTGACTGGTaGACGGGGTGTTATACACCT | + |
Preference number: 5 (lower is better) Translates to: LASDHVTPRHGTQATMPVANSDW*TGCYTP Trigger: AGGTGTATAACACCCCGTCAACCAGTCAGAGTTGGC...AACAGGCATGGTGGCCTGAGTTCCATGCCTGGGAGTCACGTGGTCTGAAGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS GCA 90 bp | GGTCCCAGCAACAGTTATAGGCAATGTGTTTGCTTGAAGCAGTCGTaGTCCCCTGTCCATTCATCATGGCCGGGGTTGAGCGTCCACTGG | + |
Preference number: 5 (lower is better) Translates to: GPSNSYRQCVCLKQS*SPVHSSWPGLSVHW Trigger: CCAGTGGACGCTCAACCCCGGCCATGATGAATGGACAGGGGAGCACGACTGCTTCAAGCAAACACATTGCCTATAACTGTTGCTGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS GCA 90 bp | AGCATGCCTGGCACTGGTCCCAGCAACAGTTATAGGCAATGTGTTTaGTTGAAGCAGTCGTGCTCCCCTGTCCATTCATCATGGCCGGGG | + |
Preference number: 5 (lower is better) Translates to: SMPGTGPSNSYRQCV*LKQSCSPVHSSWPG Trigger: CCCCGGCCATGATGAATGGACAGGGGAGCACGACTGCTTCAAGCAAACACATTGCCTATAACTGTTGCTGGGACCAGTGCCAGGCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS GCA 90 bp | GCCGCTGTAGCCAACTCTGACTGGTTGACGGGGTGTTATACACCTTaGAACCTTTCCACAAGCAAACGAACACCCCTCCACGCTGACCAT | + |
Preference number: 5 (lower is better) Translates to: AAVANSDWLTGCYTP*NLSTSKRTPLHADH Trigger: ATGGTCAGCGTGGAGGGGTGTTCGTTTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCCCGTCAACCAGTCAGAGTTGGCTACAGCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | CAACCCAACTCCTCCAAGCATTTGGCTCGCTGCTCCTTCCACCCCAAGATGAACAGGCAATGTGTTTGCTaGAAGCAGTCGTGCTCCCCT | + |
Preference number: 5 (lower is better) Translates to: QPNSSKHLARCSFHPKMNRQCVC*KQSCSP Trigger: AGGGGAGCACGACTGCTTCAAGCAAACACATTGCCT...GTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATGCTTGGAGGAGTTGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CAA 90 bp | GAGTGCTTTCTGCAGCCTGACTGCATAGCAGGCGCTTACTTTACGGTACCGCTCAGGCAATGTGTTTGCTaGAAGCAGTCGTGCTCCCCT | + |
Preference number: 5 (lower is better) Translates to: ECFLQPDCIAGAYFTVPLRQCVC*KQSCSP Trigger: AGGGGAGCACGACTGCTTCAAGCAAACACATTGCCT...GAGCGGTACCGTAAAGTAAGCGCCTGCTATGCAGTCAGGCTGCAGAAAGCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS GCA 90 bp | TATGGAGCGAATGTGGTCTGCCAGGTCTGGGCTGGAGTTGAAGCATaGCTGGCACTGGTCCCAGCAACAGTTATAGGCAATGTGTTTGCT | + |
Preference number: 5 (lower is better) Translates to: YGANVVCQVWAGVEA*LALVPATVIGNVFA Trigger: AGCAAACACATTGCCTATAACTGTTGCTGGGACCAGTGCCAGGCATGCTTCAACTCCAGCCCAGACCTGGCAGACCACATTCGCTCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | CAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTCTATTATGGGTCTCCTCATCATGGCCGGGGTaGAGCGTCCACTGGAAATTG | + |
Preference number: 5 (lower is better) Translates to: QRLSHCQRECHKLLLWVSSSWPG*SVHWKL Trigger: CAATTTCCAGTGGACGCTCAACCCCGGCCATGATGA...GGAGACCCATAATAGAAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | TGTTCTCGCTTCAGACCACGTGACTCCCAGGCATGGAACTCAGGCCACCATGCCTTGTTCTGTAAATGTTaGGGTCCAACAGCAAGGCAG | + |
Preference number: 5 (lower is better) Translates to: CSRFRPRDSQAWNSGHHALFCKC*GPTARQ Trigger: CTGCCTTGCTGTTGGACCCAAACATTTACAGAACAA...GGCATGGTGGCCTGAGTTCCATGCCTGGGAGTCACGTGGTCTGAAGCGAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS GCA 90 bp | CCTGTCCATTCATCATGGCCGGGGTTGAGCGTCCACTGGAAATTGTaGTGTCTATGTCCATTAGCGTACTGCTTATGCTGTCCTCCGAGT | + |
Preference number: 5 (lower is better) Translates to: PVHSSWPGLSVHWKL*CLCPLAYCLCCPPS Trigger: ACTCGGAGGACAGCATAAGCAGTACGCTAATGGACATAGACAGCACAATTTCCAGTGGACGCTCAACCCCGGCCATGATGAATGGACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS CCA 90 bp | CAATGTGTTTGCTTGAAGCAGTCGTGCTCCCCTGTCCATTCATCATaGCCGGGGTTGAGCGTCCACTGGAAATTGTGCTGTCTATGTCCA | + |
Preference number: 5 (lower is better) Translates to: QCVCLKQSCSPVHSS*PGLSVHWKLCCLCP Trigger: TGGACATAGACAGCACAATTTCCAGTGGACGCTCAACCCCGGCCATGATGAATGGACAGGGGAGCACGACTGCTTCAAGCAAACACATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS CCA 90 bp | TCGTGCTCCCCTGTCCATTCATCATGGCCGGGGTTGAGCGTCCACTaGAAATTGTGCTGTCTATGTCCATTAGCGTACTGCTTATGCTGT | + |
Preference number: 5 (lower is better) Translates to: SCSPVHSSWPGLSVH*KLCCLCPLAYCLCC Trigger: ACAGCATAAGCAGTACGCTAATGGACATAGACAGCACAATTTCCAGTGGACGCTCAACCCCGGCCATGATGAATGGACAGGGGAGCACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS-3UTR CAA 90 bp | GACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTTCATCATGGCCGGGGTaGAGCGTCCACTGGAAATTG | + |
Preference number: 5 (lower is better) Translates to: DPSPEKGATRHTAILFNSSSWPG*SVHWKL Trigger: CAATTTCCAGTGGACGCTCAACCCCGGCCATGATGA...ACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | CAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTCTATTATGGGTCTCCGCCAACTCTGACTGGTaGACGGGGTGTTATACACCT | + |
Preference number: 5 (lower is better) Translates to: QRLSHCQRECHKLLLWVSANSDW*TGCYTP Trigger: AGGTGTATAACACCCCGTCAACCAGTCAGAGTTGGC...GGAGACCCATAATAGAAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | CATTTGGCTCGCTGCTCCTTCCACCCCAAGATGAACAGCGCAAGGATCACAGGAGAAGGAGATTCTTCTTaGGCCTTTGGCTGGCTAGAA | + |
Preference number: 5 (lower is better) Translates to: HLARCSFHPKMNSARITGEGDSS*AFGWLE Trigger: TTCTAGCCAGCCAAAGGCCAAAGAAGAATCTCCTTC...TCCTGTGATCCTTGCGCTGTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CAA 90 bp | GAAATCCTCTTGCTTCGTCCTCCCAAATGCAGGGCTTTAGTCAGCACACCCGGCGAAGGAGATTCTTCTTaGGCCTTTGGCTGGCTAGAA | + |
Preference number: 5 (lower is better) Translates to: EILLLRPPKCRALVSTPGEGDSS*AFGWLE Trigger: TTCTAGCCAGCCAAAGGCCAAAGAAGAATCTCCTTC...GCCGGGTGTGCTGACTAAAGCCCTGCATTTGGGAGGACGAAGCAAGAGGATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CAA 90 bp | ACAGGTGAGGTAACCCAAGACCTTAGGGCAATAGCAGCCAGGAGACACCTGTGGAATGAGCGCCGTCTTTaGTTCTTTAGTTTCCTCCGC | + |
Preference number: 5 (lower is better) Translates to: TGEVTQDLRAIAARRHLWNERRL*FFSFLR Trigger: GCGGAGGAAACTAAAGAACAAAAGACGGCGCTCATT...CCACAGGTGTCTCCTGGCTGCTATTGCCCTAAGGTCTTGGGTTACCTCACCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CAA 90 bp | GGAGTGAGGACTCCAAGGAAGGAGTGCTTTCTGCAGCCTGACTGCATAGCAGGCACCTCTTCTGCGGCATaGTTCTGTAAATGTTTGGGT | + |
Preference number: 5 (lower is better) Translates to: GVRTPRKECFLQPDCIAGTSSAA*FCKCLG Trigger: ACCCAAACATTTACAGAACAATGCCGCAGAAGAGGT...GCCTGCTATGCAGTCAGGCTGCAGAAAGCACTCCTTCCTTGGAGTCCTCACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | ATGGAACTCAGGCCACCATGCCTGTTGCCCAACACCTTCATCGAGAGCCACCTCACCTCTTCTGCGGCATaGTTCTGTAAATGTTTGGGT | + |
Preference number: 5 (lower is better) Translates to: MELRPPCLLPNTFIESHLTSSAA*FCKCLG Trigger: ACCCAAACATTTACAGAACAATGCCGCAGAAGAGGT...GAGGTGGCTCTCGATGAAGGTGTTGGGCAACAGGCATGGTGGCCTGAGTTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CAA 90 bp | ATATTAACACGCTGTCCCCATGAGAGAGAGAGAGAGACCCTAGTCCTGAAAAGGTCATCATGGCCGGGGTaGAGCGTCCACTGGAAATTG | + |
Preference number: 5 (lower is better) Translates to: ILTRCPHERERETLVLKRSSWPG*SVHWKL Trigger: CAATTTCCAGTGGACGCTCAACCCCGGCCATGATGA...CCTTTTCAGGACTAGGGTCTCTCTCTCTCTCTCATGGGGACAGCGTGTTAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | AGGCAGGAAAAGACAAGCAACAGCTCTGAAAATGAGAGCAGGGCCTATGGTCTGAGGCAATGTGTTTGCTaGAAGCAGTCGTGCTCCCCT | + |
Preference number: 5 (lower is better) Translates to: RQEKTSNSSENESRAYGLRQCVC*KQSCSP Trigger: AGGGGAGCACGACTGCTTCAAGCAAACACATTGCCT...CAGACCATAGGCCCTGCTCTCATTTTCAGAGCTGTTGCTTGTCTTTTCCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR CAA 90 bp | CAACCCAACTCCTCCAAGCATTTGGCTCGCTGCTCCTTCCACCCCAAGATGAACTATGGCATCCAGTGTTaGTGCATCGAAGAAATCGTG | + |
Preference number: 5 (lower is better) Translates to: QPNSSKHLARCSFHPKMNYGIQC*CIEEIV Trigger: CACGATTTCTTCGATGCACAAACACTGGATGCCATA...GTTCATCTTGGGGTGGAAGGAGCAGCGAGCCAAATGCTTGGAGGAGTTGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
||
CDS-3UTR CAA 90 bp | TTTACGGTACCGCTCCCAACAGTAAGGAACAGCGACTCAGCCACTGTCAGAGGGACCTCTTCTGCGGCATaGTTCTGTAAATGTTTGGGT | + |
Preference number: 5 (lower is better) Translates to: FTVPLPTVRNSDSATVRGTSSAA*FCKCLG Trigger: ACCCAAACATTTACAGAACAATGCCGCAGAAGAGGT...CCCTCTGACAGTGGCTGAGTCGCTGTTCCTTACTGTTGGGAGCGGTACCGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
||
CDS-3UTR CAA 90 bp | CAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTCTATTATGGGTCTCCGGGGTGTTATACACCTaGCAACCTTTCCACAAGCAA | + |
Preference number: 5 (lower is better) Translates to: QRLSHCQRECHKLLLWVSGVLYT*QPFHKQ Trigger: TTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCCC...GGAGACCCATAATAGAAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
||
CDS-3UTR CAA 90 bp | CCCAACAGTAAGGAACAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTAATGAGCGCCGTCTTTaGTTCTTTAGTTTCCTCCGC | + |
Preference number: 5 (lower is better) Translates to: PNSKEQRLSHCQRECHKLNERRL*FFSFLR Trigger: GCGGAGGAAACTAAAGAACAAAAGACGGCGCTCATT...AAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTGTTCCTTACTGTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | TGTCTCCTCCACTTCCACCTACAAGGAGGGCAGAGAGTATGCCACAGAGCACATTTGTTCTGTAAATGTTaGGGTCCAACAGCAAGGCAG | + |
Preference number: 5 (lower is better) Translates to: CLLHFHLQGGQRVCHRAHLFCKC*GPTARQ Trigger: CTGCCTTGCTGTTGGACCCAAACATTTACAGAACAA...ATGTGCTCTGTGGCATACTCTCTGCCCTCCTTGTAGGTGGAAGTGGAGGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
||
CDS-3UTR CAA 90 bp | TCCTCCCTCAGAGACTTTCTGGAAGGACGCCCGCCCAATGCTTTGTTCTTAGACTTGTTCTGTAAATGTTaGGGTCCAACAGCAAGGCAG | + |
Preference number: 5 (lower is better) Translates to: SSLRDFLEGRPPNALFLDLFCKC*GPTARQ Trigger: CTGCCTTGCTGTTGGACCCAAACATTTACAGAACAA...GTCTAAGAACAAAGCATTGGGCGGGCGTCCTTCCAGAAAGTCTCTGAGGGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTAGGCAATGTGTTTGCTaGAAGCAGTCGTGCTCCCCT | + |
Preference number: 5 (lower is better) Translates to: LVLKREPPDTRQYSLTVIRQCVC*KQSCSP Trigger: AGGGGAGCACGACTGCTTCAAGCAAACACATTGCCT...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | AGGCAGGAAAAGACAAGCAACAGCTCTGAAAATGAGAGCAGGGCCTATGGTCTGGGGGTGTTATACACCTaGCAACCTTTCCACAAGCAA | + |
Preference number: 5 (lower is better) Translates to: RQEKTSNSSENESRAYGLGVLYT*QPFHKQ Trigger: TTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCCC...CAGACCATAGGCCCTGCTCTCATTTTCAGAGCTGTTGCTTGTCTTTTCCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR CAA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTGCCAACTCTGACTGGTaGACGGGGTGTTATACACCT | + |
Preference number: 5 (lower is better) Translates to: LVLKREPPDTRQYSLTVIANSDW*TGCYTP Trigger: AGGTGTATAACACCCCGTCAACCAGTCAGAGTTGGC...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | TGCCCAACACCTTCATCGAGAGCCACCTCAATGGCACCTATTTCCCTAATGTGTGAAGGAGATTCTTCTTaGGCCTTTGGCTGGCTAGAA | + |
Preference number: 5 (lower is better) Translates to: CPTPSSRATSMAPISLMCEGDSS*AFGWLE Trigger: TTCTAGCCAGCCAAAGGCCAAAGAAGAATCTCCTTC...ACACATTAGGGAAATAGGTGCCATTGAGGTGGCTCTCGATGAAGGTGTTGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
||
CDS-3UTR CAA 90 bp | GAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAAATGAGCGCCGTCTTTaGTTCTTTAGTTTCCTCCGC | + |
Preference number: 5 (lower is better) Translates to: ETLVLKREPPDTRQYSLTNERRL*FFSFLR Trigger: GCGGAGGAAACTAAAGAACAAAAGACGGCGCTCATT...TGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | AGGTCTTGTCAGACACATCACTGTGTCAGGCTTTCTACTCGAAGTCCACACCGTAATGAGCGCCGTCTTTaGTTCTTTAGTTTCCTCCGC | + |
Preference number: 5 (lower is better) Translates to: RSCQTHHCVRLSTRSPHRNERRL*FFSFLR Trigger: GCGGAGGAAACTAAAGAACAAAAGACGGCGCTCATT...ACGGTGTGGACTTCGAGTAGAAAGCCTGACACAGTGATGTGTCTGACAAGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
||
CDS-3UTR CAA 90 bp | CCCAACAGTAAGGAACAGCGACTCAGCCACTGTCAGAGGGAGTGCCATAAACTTTATGGCATCCAGTGTTaGTGCATCGAAGAAATCGTG | + |
Preference number: 5 (lower is better) Translates to: PNSKEQRLSHCQRECHKLYGIQC*CIEEIV Trigger: CACGATTTCTTCGATGCACAAACACTGGATGCCATA...AAGTTTATGGCACTCCCTCTGACAGTGGCTGAGTCGCTGTTCCTTACTGTTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | GAGAGAGACCCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAGCGTCCACTGGAAATaGTGCTGTCTATGTCCATTA | + |
Preference number: 5 (lower is better) Translates to: ERDPSPEKGATRHTAILFSVHWK*CCLCPL Trigger: TAATGGACATAGACAGCACAATTTCCAGTGGACGCT...AAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGGGTCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087614.11 |
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CDS-3UTR CAA 90 bp | ATATTAACACGCTGTCCCCATGAGAGAGAGAGAGAGACCCTAGTCCTGAAAAGGGGGGTGTTATACACCTaGCAACCTTTCCACAAGCAA | + |
Preference number: 5 (lower is better) Translates to: ILTRCPHERERETLVLKRGVLYT*QPFHKQ Trigger: TTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCCC...CCTTTTCAGGACTAGGGTCTCTCTCTCTCTCTCATGGGGACAGCGTGTTAATAT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | GAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCTCAGACCGGGGTGTTATACACCTaGCAACCTTTCCACAAGCAA | + |
Preference number: 5 (lower is better) Translates to: EKGATRHTAILFNSDSQTGVLYT*QPFHKQ Trigger: TTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCCC...GGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | ATATTAACACGCTGTCCCCATGAGAGAGAGAGAGAGACCCTAGTCCTGAAAAGGAATGAGCGCCGTCTTTaGTTCTTTAGTTTCCTCCGC | + |
Preference number: 5 (lower is better) Translates to: ILTRCPHERERETLVLKRNERRL*FFSFLR Trigger: GCGGAGGAAACTAAAGAACAAAAGACGGCGCTCATT...CCTTTTCAGGACTAGGGTCTCTCTCTCTCTCTCATGGGGACAGCGTGTTAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS TCA 90 bp | GTACTGTGGAAAACAACACTGTGTCCCTTCCCTAGACTTTCTATGTaGGCAGAGAGGTTAAAGCAGATGGCTCGATGTCTTATGGCATCC | + |
Preference number: 5 (lower is better) Translates to: VLWKTTLCPFPRLSM*AERLKQMARCLMAS Trigger: GGATGCCATAAGACATCGAGCCATCTGCTTTAACCTCTCTGCTCACATAGAAAGTCTAGGGAAGGGACACAGTGTTGTTTTCCACAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS-3UTR CAA 90 bp | CTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTTCATCATGGCCGGGGTaGAGCGTCCACTGGAAATTG | + |
Preference number: 5 (lower is better) Translates to: LFLREKPFCVRQLNFNPTSSWPG*SVHWKL Trigger: CAATTTCCAGTGGACGCTCAACCCCGGCCATGATGA...AGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CAA 90 bp | AAATTTAGAGTAAAAACTGCTGGTATTGCTGTCACTGTAGGGAGTGAGGACTCCAGGCAATGTGTTTGCTaGAAGCAGTCGTGCTCCCCT | + |
Preference number: 5 (lower is better) Translates to: KFRVKTAGIAVTVGSEDSRQCVC*KQSCSP Trigger: AGGGGAGCACGACTGCTTCAAGCAAACACATTGCCT...GGAGTCCTCACTCCCTACAGTGACAGCAATACCAGCAGTTTTTACTCTAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | TATACTACTGTGGCCAACCCGAAGGGACTTCTCCACACCTGTTTGTCTCCTCCATTTAGTTTCCTCCGCTaGTTCATTCCAGCTTTAGAA | + |
Preference number: 5 (lower is better) Translates to: YTTVANPKGLLHTCLSPPFSFLR*FIPALE Trigger: TTCTAAAGCTGGAATGAACAAGCGGAGGAAACTAAA...TGGAGGAGACAAACAGGTGTGGAGAAGTCCCTTCGGGTTGGCCACAGTAGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CAA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTAATGAGCGCCGTCTTTaGTTCTTTAGTTTCCTCCGC | + |
Preference number: 5 (lower is better) Translates to: LVLKREPPDTRQYSLTVINERRL*FFSFLR Trigger: GCGGAGGAAACTAAAGAACAAAAGACGGCGCTCATT...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | GAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCTCAGACCTATGGCATCCAGTGTTaGTGCATCGAAGAAATCGTG | + |
Preference number: 5 (lower is better) Translates to: EKGATRHTAILFNSDSQTYGIQC*CIEEIV Trigger: CACGATTTCTTCGATGCACAAACACTGGATGCCATA...GGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | CCTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTATGGCATCCAGTGTTaGTGCATCGAAGAAATCGTG | + |
Preference number: 5 (lower is better) Translates to: PSPEKGATRHTAILFNSDYGIQC*CIEEIV Trigger: CACGATTTCTTCGATGCACAAACACTGGATGCCATA...ATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | GCCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTTTCTGGAAGGATTGTTCTGTAAATGTTaGGGTCCAACAGCAAGGCAG | + |
Preference number: 5 (lower is better) Translates to: AINFYYGSPSSLRDFLEGLFCKC*GPTARQ Trigger: CTGCCTTGCTGTTGGACCCAAACATTTACAGAACAA...TCCTTCCAGAAAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | CCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCTCAGTTGTTCTGTAAATGTTaGGGTCCAACAGCAAGGCAG | + |
Preference number: 5 (lower is better) Translates to: PEKGATRHTAILFNSDSQLFCKC*GPTARQ Trigger: CTGCCTTGCTGTTGGACCCAAACATTTACAGAACAA...CTGAGAATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | ATATTAACACGCTGTCCCCATGAGAGAGAGAGAGAGACCCTAGTCCTGAAAAGGACCTCTTCTGCGGCATaGTTCTGTAAATGTTTGGGT | + |
Preference number: 5 (lower is better) Translates to: ILTRCPHERERETLVLKRTSSAA*FCKCLG Trigger: ACCCAAACATTTACAGAACAATGCCGCAGAAGAGGT...CCTTTTCAGGACTAGGGTCTCTCTCTCTCTCTCATGGGGACAGCGTGTTAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | AACTCTGGCAAATTCTACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGTCATCATGGCCGGGGTaGAGCGTCCACTGGAAATTG | + |
Preference number: 5 (lower is better) Translates to: NSGKFYLCRRSFAHLLVGSSWPG*SVHWKL Trigger: CAATTTCCAGTGGACGCTCAACCCCGGCCATGATGA...CCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCCAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR CAA 90 bp | AAGCCTTTCTGTGTTCGCCAGTTAAATTTCAACCCAACTCCTCCAAGCATTTGGGGGGTGTTATACACCTaGCAACCTTTCCACAAGCAA | + |
Preference number: 5 (lower is better) Translates to: KPFCVRQLNFNPTPPSIWGVLYT*QPFHKQ Trigger: TTGCTTGTGGAAAGGTTGCAAGGTGTATAACACCCC...CCAAATGCTTGGAGGAGTTGGGTTGAAATTTAACTGGCGAACACAGAAAGGCTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CAA 90 bp | ACATTAACAGTAGTACACAGTCCCTTCAGTCTGCAGACATCTCTCCTAAAGGTGGAAGGAGATTCTTCTTaGGCCTTTGGCTGGCTAGAA | + |
Preference number: 5 (lower is better) Translates to: TLTVVHSPFSLQTSLLKVEGDSS*AFGWLE Trigger: TTCTAGCCAGCCAAAGGCCAAAGAAGAATCTCCTTC...CACCTTTAGGAGAGATGTCTGCAGACTGAAGGGACTGTGTACTACTGTTAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | AGGCAGGAAAAGACAAGCAACAGCTCTGAAAATGAGAGCAGGGCCTATGGTCTGTTTAGTTTCCTCCGCTaGTTCATTCCAGCTTTAGAA | + |
Preference number: 5 (lower is better) Translates to: RQEKTSNSSENESRAYGLFSFLR*FIPALE Trigger: TTCTAAAGCTGGAATGAACAAGCGGAGGAAACTAAA...CAGACCATAGGCCCTGCTCTCATTTTCAGAGCTGTTGCTTGTCTTTTCCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR CAA 90 bp | CAGAGGGAGTGCCATAAACTTCTATTATGGGTCTCCGTCCTCCCTCAGAGACTTTTTAGTTTCCTCCGCTaGTTCATTCCAGCTTTAGAA | + |
Preference number: 5 (lower is better) Translates to: QRECHKLLLWVSVLPQRLFSFLR*FIPALE Trigger: TTCTAAAGCTGGAATGAACAAGCGGAGGAAACTAAA...AAGTCTCTGAGGGAGGACGGAGACCCATAATAGAAGTTTATGGCACTCCCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | CTAGTCCTGAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTACCTCTTCTGCGGCATaGTTCTGTAAATGTTTGGGT | + |
Preference number: 5 (lower is better) Translates to: LVLKREPPDTRQYSLTVITSSAA*FCKCLG Trigger: ACCCAAACATTTACAGAACAATGCCGCAGAAGAGGT...AATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTCAGGACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | TGTCAATCTTCCAGATGCCTCCATATCATTCTTGCTGCGAAACCGGTTAAAGCCAGCGTCCACTGGAAATaGTGCTGTCTATGTCCATTA | + |
Preference number: 5 (lower is better) Translates to: CQSSRCLHIILAAKPVKASVHWK*CCLCPL Trigger: TAATGGACATAGACAGCACAATTTCCAGTGGACGCT...GGCTTTAACCGGTTTCGCAGCAAGAATGATATGGAGGCATCTGGAAGATTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CAA 90 bp | GAAAAGGGAGCCACCAGACACACGGCAATACTCTTTAACAGTGATTCTCAGACCTTTAGTTTCCTCCGCTaGTTCATTCCAGCTTTAGAA | + |
Preference number: 5 (lower is better) Translates to: EKGATRHTAILFNSDSQTFSFLR*FIPALE Trigger: TTCTAAAGCTGGAATGAACAAGCGGAGGAAACTAAA...GGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGTGTCTGGTGGCTCCCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | TCAGGACTTCAAATCAATACACACTGTCAAGATGGTTATCTTACAGTGCTTTTGGCCAACTCTGACTGGTaGACGGGGTGTTATACACCT | + |
Preference number: 5 (lower is better) Translates to: SGLQINTHCQDGYLTVLLANSDW*TGCYTP Trigger: AGGTGTATAACACCCCGTCAACCAGTCAGAGTTGGC...CAAAAGCACTGTAAGATAACCATCTTGACAGTGTGTATTGATTTGAAGTCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 |
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CDS-3UTR CAA 90 bp | TTTTGTTCTGTAACTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAAGCCAACTCTGACTGGTaGACGGGGTGTTATACACCT | + |
Preference number: 5 (lower is better) Translates to: FCSVTFSEREAFLCSPVKANSDW*TGCYTP Trigger: AGGTGTATAACACCCCGTCAACCAGTCAGAGTTGGC...TTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAGTTACAGAACAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS-3UTR CAA 90 bp | TTGAGTACAAACTGTGTGGTCTGTGTTCACTGCTCCAAAAATGTTACCAGCTACTATGGCATCCAGTGTTaGTGCATCGAAGAAATCGTG | + |
Preference number: 5 (lower is better) Translates to: LSTNCVVCVHCSKNVTSYYGIQC*CIEEIV Trigger: CACGATTTCTTCGATGCACAAACACTGGATGCCATA...GTAGCTGGTAACATTTTTGGAGCAGTGAACACAGACCACACAGTTTGTACTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR CAA 90 bp | TTGAGTACAAACTGTGTGGTCTGTGTTCACTGCTCCAAAAATGTTACCAGCTACTTGTTCTGTAAATGTTaGGGTCCAACAGCAAGGCAG | + |
Preference number: 5 (lower is better) Translates to: LSTNCVVCVHCSKNVTSYLFCKC*GPTARQ Trigger: CTGCCTTGCTGTTGGACCCAAACATTTACAGAACAA...GTAGCTGGTAACATTTTTGGAGCAGTGAACACAGACCACACAGTTTGTACTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032359.15 |
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CDS-3UTR CAA 90 bp | CTCTGGCAAATTCTACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGGATATGGCATCCAGTGTTaGTGCATCGAAGAAATCGTG | + |
Preference number: 5 (lower is better) Translates to: LWQILPLQKIICTFTCWGYGIQC*CIEEIV Trigger: CACGATTTCTTCGATGCACAAACACTGGATGCCATA...TCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CAA 90 bp | ACACGGCAATACTCTTTAACAGTGATTCTCAGACCTAATTCGATAGACGAATTTGAAGGAGATTCTTCTTaGGCCTTTGGCTGGCTAGAA | + |
Preference number: 5 (lower is better) Translates to: TRQYSLTVILRPNSIDEFEGDSS*AFGWLE Trigger: TTCTAGCCAGCCAAAGGCCAAAGAAGAATCTCCTTC...AAATTCGTCTATCGAATTAGGTCTGAGAATCACTGTTAAAGAGTATTGCCGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | AATACTCAAGCAAGGTCTACAATCATCGGTCAATTAATGACTTACAAGAACATGGAAGGAGATTCTTCTTaGGCCTTTGGCTGGCTAGAA | + |
Preference number: 5 (lower is better) Translates to: NTQARSTIIGQLMTYKNMEGDSS*AFGWLE Trigger: TTCTAGCCAGCCAAAGGCCAAAGAAGAATCTCCTTC...CATGTTCTTGTAAGTCATTAATTGACCGATGATTGTAGACCTTGCTTGAGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS-3UTR CAA 90 bp | GGCAAATTCTACCTTTGCAGAAGATCATTTGCACATTTACTTGTTGGGGAAGACTTTAGTTTCCTCCGCTaGTTCATTCCAGCTTTAGAA | + |
Preference number: 5 (lower is better) Translates to: GKFYLCRRSFAHLLVGEDFSFLR*FIPALE Trigger: TTCTAAAGCTGGAATGAACAAGCGGAGGAAACTAAA...GTCTTCCCCAACAAGTAAATGTGCAAATGATCTTCTGCAAAGGTAGAATTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032359.15 ENSMUST00000162903.7 |
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CDS-3UTR CAA 90 bp | TTTTGTTCTGTAACTTTTTCTGAGAGAGAAGCCTTTCTGTGTTCGCCAGTTAAAACCTCTTCTGCGGCATaGTTCTGTAAATGTTTGGGT | + |
Preference number: 5 (lower is better) Translates to: FCSVTFSEREAFLCSPVKTSSAA*FCKCLG Trigger: ACCCAAACATTTACAGAACAATGCCGCAGAAGAGGT...TTTAACTGGCGAACACAGAAAGGCTTCTCTCTCAGAAAAAGTTACAGAACAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095350.11 |
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CDS CCA 90 bp | GCATTGTTCTGTAAATGTTTGGGTCCAACAGCAAGGCAGTATCTTTaGGTAGCTTTGATAAATGAACTACTTTCGTTTTTAACTGATGTC | + |
Preference number: 5 (lower is better) Translates to: ALFCKCLGPTARQYL*VALINELLSFLTDV Trigger: GACATCAGTTAAAAACGAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTGTTGGACCCAAACATTTACAGAACAATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS-3UTR CAA 90 bp | AATACTCAAGCAAGGTCTACAATCATCGGTCAATTAATGACTTACAAGAACATGTTTAGTTTCCTCCGCTaGTTCATTCCAGCTTTAGAA | + |
Preference number: 5 (lower is better) Translates to: NTQARSTIIGQLMTYKNMFSFLR*FIPALE Trigger: TTCTAAAGCTGGAATGAACAAGCGGAGGAAACTAAA...CATGTTCTTGTAAGTCATTAATTGACCGATGATTGTAGACCTTGCTTGAGTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000161335.8 |
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CDS GCA 72 bp | GGCTCAGCGGCTCCCCGTCGGACGACATCTCCAGGCTaGCCCGCCGGCCCCCGGAGGTCGCGCTGCTCCCGC | + |
Preference number: 6 (lower is better) Translates to: GSAAPRRTTSPG*PAGPRRSRCSR Trigger: GCGGGAGCAGCGCGACCTCCGGGGGCCGGCGGGGCAGCCTGGAGATGTCGTCCGACGGGGAGCCGCTGAGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS GCA 72 bp | CCAGGCCCTCCTTCCCGTCCCCATCGCCGCTGCTGCTaGTCGCCGCGCCCGGGCTCAGCGAGCGCGTCTCGT | + |
Preference number: 6 (lower is better) Translates to: PGPPSRPHRRCC*SPRPGSASASR Trigger: ACGAGACGCGCTCGCTGAGCCCGGGCGCGGCGAGCAGCAGCAGCGGCGATGGGGACGGGAAGGAGGGCCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS GCA 72 bp | CCTCCAGGCCCTCCTTCCCGTCCCCATCGCCGCTGCTaGTGCTCGCCGCGCCCGGGCTCAGCGAGCGCGTCT | + |
Preference number: 6 (lower is better) Translates to: PPGPPSRPHRRC*CSPRPGSASAS Trigger: AGACGCGCTCGCTGAGCCCGGGCGCGGCGAGCAGCAGCAGCGGCGATGGGGACGGGAAGGAGGGCCTGGAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS GCA 72 bp | CCATTAGCGTACTGCTTATGCTGTCCTCCGAGTCCATaGGGCTCAGCGGCTCCCCGTCGGACGACATCTCCA | + |
Preference number: 6 (lower is better) Translates to: PLAYCLCCPPSP*GSAAPRRTTSP Trigger: TGGAGATGTCGTCCGACGGGGAGCCGCTGAGCCGCATGGACTCGGAGGACAGCATAAGCAGTACGCTAATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS GCA 72 bp | ACGCTGACCATCGACATGTATGGAGCGAATGTGGTCTaGCAGGTCTGGGCTGGAGTTGAAGCATGCCTGGCA | + |
Preference number: 6 (lower is better) Translates to: TLTIDMYGANVV*QVWAGVEACLA Trigger: TGCCAGGCATGCTTCAACTCCAGCCCAGACCTGGCAGACCACATTCGCTCCATACATGTCGATGGTCAGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS CCA 72 bp | ATCGACATGTATGGAGCGAATGTGGTCTGCCAGGTCTaGGCTGGAGTTGAAGCATGCCTGGCACTGGTCCCA | + |
Preference number: 6 (lower is better) Translates to: IDMYGANVVCQV*AGVEACLALVP Trigger: TGGGACCAGTGCCAGGCATGCTTCAACTCCAGCCCAGACCTGGCAGACCACATTCGCTCCATACATGTCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS CCA 72 bp | AAACGAACACCCCTCCACGCTGACCATCGACATGTATaGAGCGAATGTGGTCTGCCAGGTCTGGGCTGGAGT | + |
Preference number: 6 (lower is better) Translates to: KRTPLHADHRHV*SECGLPGLGWS Trigger: ACTCCAGCCCAGACCTGGCAGACCACATTCGCTCCATACATGTCGATGGTCAGCGTGGAGGGGTGTTCGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS TCA 72 bp | CTGAAGTGTGTGGGTACATGGCGAGCTAGCCCTCCCTaGGAAGCAAAGCTGGCATTGCAGCCACCAACTACA | + |
Preference number: 6 (lower is better) Translates to: LKCVGTWRASPP*EAKLALQPPTT Trigger: TGTAGTTGGTGGCTGCAATGCCAGCTTTGCTTCTCAGGGAGGGCTAGCTCGCCATGTACCCACACACTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS CCA 72 bp | TGCTTGAAGCAGTCGTGCTCCCCTGTCCATTCATCATaGCCGGGGTTGAGCGTCCACTGGAAATTGTGCTGT | + |
Preference number: 6 (lower is better) Translates to: CLKQSCSPVHSS*PGLSVHWKLCC Trigger: ACAGCACAATTTCCAGTGGACGCTCAACCCCGGCCATGATGAATGGACAGGGGAGCACGACTGCTTCAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS CAA 72 bp | CAGTCGTGCTCCCCTGTCCATTCATCATGGCCGGGGTaGAGCGTCCACTGGAAATTGTGCTGTCTATGTCCA | + |
Preference number: 6 (lower is better) Translates to: QSCSPVHSSWPG*SVHWKLCCLCP Trigger: TGGACATAGACAGCACAATTTCCAGTGGACGCTCAACCCCGGCCATGATGAATGGACAGGGGAGCACGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS CAA 90 bp | ATGCCTGGCACTGGTCCCAGCAACAGTTATAGGCAATGTGTTTGCTaGAAGCAGTCGTGCTCCCCTGTCCATTCATCATGGCCGGGGTTG | + |
Preference number: 6 (lower is better) Translates to: MPGTGPSNSYRQCVC*KQSCSPVHSSWPGL Trigger: CAACCCCGGCCATGATGAATGGACAGGGGAGCACGACTGCTTCAAGCAAACACATTGCCTATAACTGTTGCTGGGACCAGTGCCAGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS TCA 72 bp | AGTCGTGCTCCCCTGTCCATTCATCATGGCCGGGGTTaGGCGTCCACTGGAAATTGTGCTGTCTATGTCCAT | + |
Preference number: 6 (lower is better) Translates to: SRAPLSIHHGRG*ASTGNCAVYVH Trigger: ATGGACATAGACAGCACAATTTCCAGTGGACGCTCAACCCCGGCCATGATGAATGGACAGGGGAGCACGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS TCA 72 bp | CCACTGTGTGTCAGCATGTGCCGCTGTAGCCAACTCTaGCTGGTTGACGGGGTGTTATACACCTTGCAACCT | + |
Preference number: 6 (lower is better) Translates to: PLCVSMCRCSQL*LVDGVLYTLQP Trigger: AGGTTGCAAGGTGTATAACACCCCGTCAACCAGTCAGAGTTGGCTACAGCGGCACATGCTGACACACAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS CAA 90 bp | TGCTTGAAGCAGTCGTGCTCCCCTGTCCATTCATCATGGCCGGGGTaGAGCGTCCACTGGAAATTGTGCTGTCTATGTCCATTAGCGTAC | + |
Preference number: 6 (lower is better) Translates to: CLKQSCSPVHSSWPG*SVHWKLCCLCPLAY Trigger: GTACGCTAATGGACATAGACAGCACAATTTCCAGTGGACGCTCAACCCCGGCCATGATGAATGGACAGGGGAGCACGACTGCTTCAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS TCA 72 bp | GCCTTTGGCTGGCTAGAAACTTTTGAGGAGTTCTGCTaGCTGAAGTGTGTGGGTACATGGCGAGCTAGCCCT | + |
Preference number: 6 (lower is better) Translates to: AFGWLETFEEFC*LKCVGTWRASP Trigger: AGGGCTAGCTCGCCATGTACCCACACACTTCAGTCAGCAGAACTCCTCAAAAGTTTCTAGCCAGCCAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS CCA 72 bp | TGTGTGTCAGCATGTGCCGCTGTAGCCAACTCTGACTaGTTGACGGGGTGTTATACACCTTGCAACCTTTCC | + |
Preference number: 6 (lower is better) Translates to: CVSACAAVANSD*LTGCYTPCNLS Trigger: GGAAAGGTTGCAAGGTGTATAACACCCCGTCAACCAGTCAGAGTTGGCTACAGCGGCACATGCTGACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS CAA 72 bp | GTGTCAGCATGTGCCGCTGTAGCCAACTCTGACTGGTaGACGGGGTGTTATACACCTTGCAACCTTTCCACA | + |
Preference number: 6 (lower is better) Translates to: VSACAAVANSDW*TGCYTPCNLST Trigger: TGTGGAAAGGTTGCAAGGTGTATAACACCCCGTCAACCAGTCAGAGTTGGCTACAGCGGCACATGCTGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS TCA 72 bp | CTGGTCCCAGCAACAGTTATAGGCAATGTGTTTGCTTaGAGCAGTCGTGCTCCCCTGTCCATTCATCATGGC | + |
Preference number: 6 (lower is better) Translates to: LVPATVIGNVFA*SSRAPLSIHHG Trigger: GCCATGATGAATGGACAGGGGAGCACGACTGCTTCAAGCAAACACATTGCCTATAACTGTTGCTGGGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS GCA 72 bp | AACAGTTATAGGCAATGTGTTTGCTTGAAGCAGTCGTaGTCCCCTGTCCATTCATCATGGCCGGGGTTGAGC | + |
Preference number: 6 (lower is better) Translates to: NSYRQCVCLKQS*SPVHSSWPGLS Trigger: GCTCAACCCCGGCCATGATGAATGGACAGGGGAGCACGACTGCTTCAAGCAAACACATTGCCTATAACTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS GCA 72 bp | GGCACTGGTCCCAGCAACAGTTATAGGCAATGTGTTTaGTTGAAGCAGTCGTGCTCCCCTGTCCATTCATCA | + |
Preference number: 6 (lower is better) Translates to: GTGPSNSYRQCV*LKQSCSPVHSS Trigger: TGATGAATGGACAGGGGAGCACGACTGCTTCAAGCAAACACATTGCCTATAACTGTTGCTGGGACCAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 |
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CDS GCA 72 bp | TCATCATGGCCGGGGTTGAGCGTCCACTGGAAATTGTaGTGTCTATGTCCATTAGCGTACTGCTTATGCTGT | + |
Preference number: 6 (lower is better) Translates to: SSWPGLSVHWKL*CLCPLAYCLCC Trigger: ACAGCATAAGCAGTACGCTAATGGACATAGACAGCACAATTTCCAGTGGACGCTCAACCCCGGCCATGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS CAA 72 bp | CATTCATCATGGCCGGGGTTGAGCGTCCACTGGAAATaGTGCTGTCTATGTCCATTAGCGTACTGCTTATGC | + |
Preference number: 6 (lower is better) Translates to: HSSWPGLSVHWK*CCLCPLAYCLC Trigger: GCATAAGCAGTACGCTAATGGACATAGACAGCACAATTTCCAGTGGACGCTCAACCCCGGCCATGATGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087614.11 ENSMUST00000095350.11 |
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CDS CAA 90 bp | GGCCGCGGTAATGAGCGCCGTCTTTTGTTCTTTAGTTTCCTCCGCTaGTTCATTCCAGCTTTAGAAGGAGATTCTTCTTTGGCCTTTGGC | + |
Preference number: 6 (lower is better) Translates to: GRGNERRLLFFSFLR*FIPALEGDSSLAFG Trigger: GCCAAAGGCCAAAGAAGAATCTCCTTCTAAAGCTGGAATGAACAAGCGGAGGAAACTAAAGAACAAAAGACGGCGCTCATTACCGCGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS TCA 72 bp | AGATTCTTCTTTGGCCTTTGGCTGGCTAGAAACTTTTaGGGAGTTCTGCTGACTGAAGTGTGTGGGTACATG | + |
Preference number: 6 (lower is better) Translates to: RFFFGLWLARNF*GVLLTEVCGYM Trigger: CATGTACCCACACACTTCAGTCAGCAGAACTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGAAGAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS TCA 72 bp | AAAACAACACTGTGTCCCTTCCCTAGACTTTCTATGTaGGCAGAGAGGTTAAAGCAGATGGCTCGATGTCTT | + |
Preference number: 6 (lower is better) Translates to: KTTLCPFPRLSM*AERLKQMARCL Trigger: AAGACATCGAGCCATCTGCTTTAACCTCTCTGCTCACATAGAAAGTCTAGGGAAGGGACACAGTGTTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS CCA 72 bp | CCAGATTCCTCCTTTCTCTTCGCTATTACAGTACTGTaGAAAACAACACTGTGTCCCTTCCCTAGACTTTCT | + |
Preference number: 6 (lower is better) Translates to: PDSSFLFAITVL*KTTLCPFPRLS Trigger: AGAAAGTCTAGGGAAGGGACACAGTGTTGTTTTCCACAGTACTGTAATAGCGAAGAGAAAGGAGGAATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS CAA 72 bp | CGCTTGTTCATTCCAGCTTTAGAAGGAGATTCTTCTTaGGCCTTTGGCTGGCTAGAAACTTTTGAGGAGTTC | + |
Preference number: 6 (lower is better) Translates to: RLFIPALEGDSS*AFGWLETFEEF Trigger: GAACTCCTCAAAAGTTTCTAGCCAGCCAAAGGCCAAAGAAGAATCTCCTTCTAAAGCTGGAATGAACAAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS TCA 72 bp | ACCCATACATCTGGCAGAATGTCTTCCGGCATCCAATaGAGCAAAAGCTTTATCTTTCCAGATTCCTCCTTT | + |
Preference number: 6 (lower is better) Translates to: THTSGRMSSGIQ*SKSFIFPDSSF Trigger: AAAGGAGGAATCTGGAAAGATAAAGCTTTTGCTTCATTGGATGCCGGAAGACATTCTGCCAGATGTATGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS CAA 72 bp | TTGGGTCCAACAGCAAGGCAGTATCTTTGGGTAGCTTaGATAAATGAACTACTTTCGTTTTTAACTGATGTC | + |
Preference number: 6 (lower is better) Translates to: LGPTARQYLWVA*INELLSFLTDV Trigger: GACATCAGTTAAAAACGAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTGTTGGACCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS CAA 90 bp | TGTAAATGTTTGGGTCCAACAGCAAGGCAGTATCTTTGGGTAGCTTaGATAAATGAACTACTTTCGTTTTTAACTGATGTCGTTCACTCT | + |
Preference number: 6 (lower is better) Translates to: CKCLGPTARQYLWVA*INELLSFLTDVVHS Trigger: AGAGTGAACGACATCAGTTAAAAACGAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTGTTGGACCCAAACATTTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |
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CDS CCA 72 bp | TGTAAATGTTTGGGTCCAACAGCAAGGCAGTATCTTTaGGTAGCTTTGATAAATGAACTACTTTCGTTTTTA | + |
Preference number: 6 (lower is better) Translates to: CKCLGPTARQYL*VALINELLSFL Trigger: TAAAAACGAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTGTTGGACCCAAACATTTACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000032359.15 ENSMUST00000087614.11 ENSMUST00000095350.11 ENSMUST00000160836.8 ENSMUST00000161335.8 ENSMUST00000162903.7 |