Pregenerated sensors for ADSS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015961Ensembl transcript IDs: ENSMUST00000016105.9
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTaGATGGGAAACCATTCATCCGCACTAGCATTATCAAGAACAGAA | + |
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Preference number: 1 (lower is better) Translates to: ILPKILLISTQLAPE*MGNHSSALALSRTE Trigger: TTCTGTTCTTGATAATGCTAGTGCGGATGAATGGTTTCCCATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATGGGAAAAAGCCAAGGGCCAGGTaGTCCCTCTTTGCTTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PPKDSTDLYPASPRVHGKKPRAR*SLFAFS Trigger: TGAAAAAGCAAAGAGGGATCACCTGGCCCTTGGCTT...TTTCCCATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATCCATCCATCAGAAACTaGAAACCAACGCCAGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LDPPKDSTDLYPASPRVHPSIRN*KPTPAE Trigger: TTCAGCTGGCGTTGGTTTGCAGTTTCTGATGGATGG...ATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGATCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATCAGGTGATCCCTCTTTaGTTTTTCAAGAAAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LDPPKDSTDLYPASPRVHQVIPL*FFKKGG Trigger: CCCTCCTTTCTTGAAAAAGCAAAGAGGGATCACCTG...ATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGATCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATGGGAAAGGCATGATCAAAATATaGCTGACAACTTGGACTCAT | + |
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Preference number: 2 (lower is better) Translates to: PPKDSTDLYPASPRVHGKGMIKI*LTTWTH Trigger: ATGAGTCCAAGTTGTCAGCCATATTTTGATCATGCC...TTTCCCATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| 3UTR-3UTR GCA 90 bp | TTAGATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATACCAAAGCTCAATTTTaGAATGGTTTCAGCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LDPPKDSTDLYPASPRVHTKAQF*NGFSRG Trigger: TCCTCTGCTGAAACCATTGCAAAATTGAGCTTTGGT...ATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGATCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| 3UTR-3UTR CAA 90 bp | GATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATGGGGCATACTGGAAATATTaGGTTGCTTTTAATCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: DPPKDSTDLYPASPRVHGAYWKY*VAFNQL Trigger: CAGCTGATTAAAAGCAACCAAATATTTCCAGTATGC...CCCATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| 3UTR GCA 72 bp | AAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTaGATGGGAAACCATTCATCCGCACTAGCATTATCA | + |
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Preference number: 3 (lower is better) Translates to: KILLISTQLAPE*MGNHSSALALS Trigger: TGATAATGCTAGTGCGGATGAATGGTTTCCCATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| 3UTR CCA 72 bp | TTTCAAGAAAGGAGGGATGAGGGCATGATCAAAATATaGCTGACAACTTGGACTCATGCGGGTTACTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: FQERRDEGMIKI*LTTWTHAGYLW Trigger: CCACAAGTAACCCGCATGAGTCCAAGTTGTCAGCCATATTTTGATCATGCCCTCATCCCTCCTTTCTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| 3UTR-3UTR CAA 90 bp | TTAGATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATACTGGAAATATTTGGTaGCTTTTAATCAGCTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: LDPPKDSTDLYPASPRVHTGNIW*LLISCW Trigger: CCAACAGCTGATTAAAAGCAACCAAATATTTCCAGT...ATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CCA 90 bp | GGTACAACCTCAAACACAACGGCCATAATGAAGAAAAGCTACACTGGAAGTTCTCGTTGGGCAGGGAGGTaGCCGCCGGGCTGCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GTTSNTTAIMKKSYTGSSRWAGR*PPGCSR Trigger: CCGAGAGCAGCCCGGCGGCCACCTCCCTGCCCAACG...AGAACTTCCAGTGTAGCTTTTCTTCATTATGGCCGTTGTGTTTGAGGTTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR GCA 90 bp | CTAACCATGGCAAGGACTGTGCGGCACCATGAGAAGCAGAGCAACAGATGTGGCGCTTGCTCTTGTCTCTaGTGTTCCTGGATACCATCA | + |
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Preference number: 4 (lower is better) Translates to: LTMARTVRHHEKQSNRCGACSCL*CSWIPS Trigger: TGATGGTATCCAGGAACAGCAGAGACAAGAGCAAGC...GCCACATCTGTTGCTCTGCTTCTCATGGTGCCGCACAGTCCTTGCCATGGTTAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR TCA 90 bp | ATGAGAAGCAGAGCAACAGATGTGGCAGCCATGCCAGCCGGGAAGCTGGATGAGTCCAACAGTACAGTTTaGAGAGGTTACAAAAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: MRSRATDVAAMPAGKLDESNSTV*RGYKRV Trigger: TACCCTTTTGTAACCTCTTCAAACTGTACTGTTGGA...CTCATCCAGCTTCCCGGCTGGCATGGCTGCCACATCTGTTGCTCTGCTTCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR GCA 90 bp | CTAACCATGGCAAGGACTGTGCGGCACCATGAGAAGCAGAGCAACAGATGTGGCCTGGATACCATCAGCTaGTTGATGAAAGTCAAACAC | + |
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Preference number: 4 (lower is better) Translates to: LTMARTVRHHEKQSNRCGLDTIS*LMKVKH Trigger: GTGTTTGACTTTCATCAAGCAGCTGATGGTATCCAG...GCCACATCTGTTGCTCTGCTTCTCATGGTGCCGCACAGTCCTTGCCATGGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CCA 90 bp | CCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATGGGAAACAAGATTTTCTTGGGTaGTCCATGGAGGGCCTCATA | + |
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Preference number: 4 (lower is better) Translates to: PPKDSTDLYPASPRVHGKQDFLG*SMEGLI Trigger: TATGAGGCCCTCCATGGACCACCCAAGAAAATCTTG...TTTCCCATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR GCA 90 bp | CCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATGGGAAACCAATTTCATTGTCTTaGTCTGTGGGAAAGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: PPKDSTDLYPASPRVHGKPISLS*SVGKAP Trigger: TGGTGCCTTTCCCACAGAGCAAGACAATGAAATTGG...TTTCCCATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CCA 90 bp | GATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATGGGGACTTCTTGGTTTGCTaGGAAATGAGGTATGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: DPPKDSTDLYPASPRVHGDFLVC*EMRYGF Trigger: GAAACCATACCTCATTTCCCAGCAAACCAAGAAGTC...CCCATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CCA 90 bp | TTAGATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATTTCTTGGGTGGTCCATaGAGGGCCTCATATAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LDPPKDSTDLYPASPRVHFLGGP*RASYRK Trigger: TTTCCTATATGAGGCCCTCCATGGACCACCCAAGAA...ATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGATCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CCA 90 bp | AGCCATCCATCAGAAACTGCAAACCAACGCCAGCTGAAAACTCATTTCAATGTCCATTGTCTTGCTCTGTaGGAAAGGCACCAATACCAA | + |
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Preference number: 4 (lower is better) Translates to: SHPSETANQRQLKTHFNVHCLAL*ERHQYQ Trigger: TTGGTATTGGTGCCTTTCCCACAGAGCAAGACAATG...GACATTGAAATGAGTTTTCAGCTGGCGTTGGTTTGCAGTTTCTGATGGATGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR TCA 90 bp | TTAGATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATCCACTAGGTAAAAGATaGAAGTCATATTCCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: LDPPKDSTDLYPASPRVHPLGKR*KSYSTE Trigger: TTCTGTGGAATATGACTTTCATCTTTTACCTAGTGG...ATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CCA 90 bp | AGCCATCCATCAGAAACTGCAAACCAACGCCAGCTGAAAACTCATTTCAATGTCGAATCATGGACTCTCTaGATTTACCTACACCAATCC | + |
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Preference number: 4 (lower is better) Translates to: SHPSETANQRQLKTHFNVESWTL*IYLHQS Trigger: GGATTGGTGTAGGTAAATCCAGAGAGTCCATGATTC...GACATTGAAATGAGTTTTCAGCTGGCGTTGGTTTGCAGTTTCTGATGGATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CCA 90 bp | GGTACAACCTCAAACACAACGGCCATAATGAAGAAAAGCTACACTGGAAGTTCTCTGGGAAATGAGGTATaGTTTCCCCATCTAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: GTTSNTTAIMKKSYTGSSLGNEV*FPHLIC Trigger: ACAAATTAGATGGGGAAACCATACCTCATTTCCCAG...AGAACTTCCAGTGTAGCTTTTCTTCATTATGGCCGTTGTGTTTGAGGTTGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR TCA 90 bp | AAGTCTCATGAACATACTCCCCCTACCCTACCAAAGCTCAATTTTGCAATGGTTTTTCCATATAACCCTTaGGTTGCTGTAATTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: KSHEHTPPTLPKLNFAMVFPYNP*VAVIHL Trigger: AAGGTGAATTACAGCAACTCAAGGGTTATATGGAAA...AACCATTGCAAAATTGAGCTTTGGTAGGGTAGGGGGAGTATGTTCATGAGACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CCA 90 bp | GGTACAACCTCAAACACAACGGCCATAATGAAGAAAAGCTACACTGGAAGTTCTACCAATCCATTTAACTaGTATTTGAAGCTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: GTTSNTTAIMKKSYTGSSTNPFN*YLKLIF Trigger: GAAGATGAGCTTCAAATACCAGTTAAATGGATTGGT...AGAACTTCCAGTGTAGCTTTTCTTCATTATGGCCGTTGTGTTTGAGGTTGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CAA 90 bp | AAGTCTCATGAACATACTCCCCCTACCCTACCAAAGCTCAATTTTGCAATGGTTCGGCCACAGTCGCCGTaGGGCAGGGAGGTGGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: KSHEHTPPTLPKLNFAMVRPQSP*GREVAA Trigger: GGCGGCCACCTCCCTGCCCAACGGCGACTGTGGCCG...AACCATTGCAAAATTGAGCTTTGGTAGGGTAGGGGGAGTATGTTCATGAGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CAA 90 bp | CTAACCATGGCAAGGACTGTGCGGCACCATGAGAAGCAGAGCAACAGATGTGGCTCTACCAAGATTTTCTaGGGTGGTCCATGGAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LTMARTVRHHEKQSNRCGSTKIF*GGPWRA Trigger: GGCCCTCCATGGACCACCCAAGAAAATCTTGGTAGA...GCCACATCTGTTGCTCTGCTTCTCATGGTGCCGCACAGTCCTTGCCATGGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CAA 90 bp | GATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATGGGTGGTTAGCTAGAACTTaGAACCTCTCAGAGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: DPPKDSTDLYPASPRVHGWLART*NLSEKP Trigger: TGGCTTCTCTGAGAGGTTCAAAGTTCTAGCTAACCA...CCCATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CAA 90 bp | CTAACCATGGCAAGGACTGTGCGGCACCATGAGAAGCAGAGCAACAGATGTGGCCTCCAACAGTACAGTTaGAAGAGGTTACAAAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: LTMARTVRHHEKQSNRCGLQQYS*KRLQKG Trigger: ACCCTTTTGTAACCTCTTCAAACTGTACTGTTGGAG...GCCACATCTGTTGCTCTGCTTCTCATGGTGCCGCACAGTCCTTGCCATGGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CAA 90 bp | CCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATGGGAAATCCAAAATATCCAACTaGGTAAGGGCCAACGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: PPKDSTDLYPASPRVHGKSKISN*VRANAV Trigger: TACTGCGTTGGCCCTTACCAAGTTGGATATTTTGGA...TTTCCCATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CAA 90 bp | TTAGATCCTCCCAAAGATTCTACTGATCTCTACCCAGCTAGCCCCAGAGTGCATCTAACAATGCTGCGTTaGCACCTTCTACCAAGATTT | + |
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Preference number: 5 (lower is better) Translates to: LDPPKDSTDLYPASPRVHLTMLR*HLLPRF Trigger: AAATCTTGGTAGAAGGTGCAAACGCAGCATTGTTAG...ATGCACTCTGGGGCTAGCTGGGTAGAGATCAGTAGAATCTTTGGGAGGATCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CAA 90 bp | CTTTTTCAAGAAAGGAGGGATGAGGGCATGATCAAAATATGGCTGACAACTTGGTACTTCTCCAACATTTaGAGGGGGCATGCCCAAACC | + |
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Preference number: 5 (lower is better) Translates to: LFQERRDEGMIKIWLTTWYFSNI*RGHAQT Trigger: GGTTTGGGCATGCCCCCTCAAAATGTTGGAGAAGTA...CCAAGTTGTCAGCCATATTTTGATCATGCCCTCATCCCTCCTTTCTTGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CAA 90 bp | AGCCATCCATCAGAAACTGCAAACCAACGCCAGCTGAAAACTCATTTCAATGTCTCCAATTTCATTGTCTaGCTCTGTGGGAAAGGCACC | + |
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Preference number: 5 (lower is better) Translates to: SHPSETANQRQLKTHFNVSNFIV*LCGKGT Trigger: GGTGCCTTTCCCACAGAGCAAGACAATGAAATTGGA...GACATTGAAATGAGTTTTCAGCTGGCGTTGGTTTGCAGTTTCTGATGGATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS GCA 90 bp | AAGCTTTCACAACTCCATATACTTCTCCAACATTTTGAGGGGGCATaGCCAAACCTGTACAAACACCTCCAACAGTACAGTTTGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: KLSQLHILLQHFEGA*PNLYKHLQQYSLKR Trigger: CCTCTTCAAACTGTACTGTTGGAGGTGTTTGTACAGGTTTGGGCATGCCCCCTCAAAATGTTGGAGAAGTATATGGAGTTGTGAAAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS CCA 90 bp | CAATATCTAACAATGCTGCGTTTGCACCTTCTACCAAGATTTTCTTaGGTGGTCCATGGAGGGCCTCATATAGGAAATAAACTCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: QYLTMLRLHLLPRFS*VVHGGPHIGNKLHL Trigger: AAGATGGAGTTTATTTCCTATATGAGGCCCTCCATGGACCACCCAAGAAAATCTTGGTAGAAGGTGCAAACGCAGCATTGTTAGATATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS-3UTR CAA 90 bp | AAGTCTCATGAACATACTCCCCCTACCCTACCAAAGCTCAATTTTGCAATGGTTTTAAGACTTCTTGGTTaGCTGGGAAATGAGGTATGG | + |
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Preference number: 5 (lower is better) Translates to: KSHEHTPPTLPKLNFAMVLRLLG*LGNEVW Trigger: CCATACCTCATTTCCCAGCAAACCAAGAAGTCTTAA...AACCATTGCAAAATTGAGCTTTGGTAGGGTAGGGGGAGTATGTTCATGAGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS GCA 72 bp | CAACTCCATATACTTCTCCAACATTTTGAGGGGGCATaGCCAAACCTGTACAAACACCTCCAACAGTACAGT | + |
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Preference number: 6 (lower is better) Translates to: QLHILLQHFEGA*PNLYKHLQQYS Trigger: ACTGTACTGTTGGAGGTGTTTGTACAGGTTTGGGCATGCCCCCTCAAAATGTTGGAGAAGTATATGGAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS CAA 72 bp | GTAAGCTTTCACAACTCCATATACTTCTCCAACATTTaGAGGGGGCATGCCCAAACCTGTACAAACACCTCC | + |
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Preference number: 6 (lower is better) Translates to: VSFHNSIYFSNI*RGHAQTCTNTS Trigger: GGAGGTGTTTGTACAGGTTTGGGCATGCCCCCTCAAAATGTTGGAGAAGTATATGGAGTTGTGAAAGCTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS CAA 90 bp | TCTAGTGGTGTAAGCTTTCACAACTCCATATACTTCTCCAACATTTaGAGGGGGCATGCCCAAACCTGTACAAACACCTCCAACAGTACA | + |
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Preference number: 6 (lower is better) Translates to: SSGVSFHNSIYFSNI*RGHAQTCTNTSNST Trigger: TGTACTGTTGGAGGTGTTTGTACAGGTTTGGGCATGCCCCCTCAAAATGTTGGAGAAGTATATGGAGTTGTGAAAGCTTACACCACTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS CCA 72 bp | ACAATGCTGCGTTTGCACCTTCTACCAAGATTTTCTTaGGTGGTCCATGGAGGGCCTCATATAGGAAATAAA | + |
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Preference number: 6 (lower is better) Translates to: TMLRLHLLPRFS*VVHGGPHIGNK Trigger: TTTATTTCCTATATGAGGCCCTCCATGGACCACCCAAGAAAATCTTGGTAGAAGGTGCAAACGCAGCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS TCA 72 bp | GCCCAAACCTGTACAAACACCTCCAACAGTACAGTTTaGAGAGGTTACAAAAGGGTAAGTTCCAAAATCAAT | + |
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Preference number: 6 (lower is better) Translates to: AQTCTNTSNSTV*RGYKRVSSKIN Trigger: ATTGATTTTGGAACTTACCCTTTTGTAACCTCTTCAAACTGTACTGTTGGAGGTGTTTGTACAGGTTTGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS CAA 72 bp | GGTAAGTTCCAAAATCAATATCTAACAATGCTGCGTTaGCACCTTCTACCAAGATTTTCTTGGGTGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GKFQNQYLTMLR*HLLPRFSWVVH Trigger: ATGGACCACCCAAGAAAATCTTGGTAGAAGGTGCAAACGCAGCATTGTTAGATATTGATTTTGGAACTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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| CDS CAA 72 bp | TGCCCAAACCTGTACAAACACCTCCAACAGTACAGTTaGAAGAGGTTACAAAAGGGTAAGTTCCAAAATCAA | + |
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Preference number: 6 (lower is better) Translates to: CPNLYKHLQQYS*KRLQKGKFQNQ Trigger: TTGATTTTGGAACTTACCCTTTTGTAACCTCTTCAAACTGTACTGTTGGAGGTGTTTGTACAGGTTTGGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016105.9 |
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