Pregenerated sensors for ADRB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031489Ensembl transcript IDs: ENSMUST00000081438.10, ENSMUST00000117565.2, ENSMUST00000121838.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCTCCAAGGCCATAGGGCTCCTCCCAGGGCCGTCAAGCACAGGTaGCCTGCCGTCCCAGCTGCTGAGGTAGTAGTGAAGTTCAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: GLQGHRAPPRAVKHR*PAVPAAEVVVKFKV Trigger: CACCTTGAACTTCACTACTACCTCAGCAGCTGGGACGGCAGGCCACCTGTGCTTGACGGCCCTGGGAGGAGCCCTATGGCCTTGGAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGGTAGTAGTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGATCGGTTCTGGAGCGTTaGAGAGTTGAGGTTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: AEVVVKFKVGLRQLLSERSVLER*RVEVPG Trigger: CCCTGGAACCTCAACTCTCCAACGCTCCAGAACCGA...TCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCACTACTACCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGATTCCTGCTCTCAAACTAACCAGAGACACAGAGCCTGGAGACAGAGTGATCCAGGGGACTCACTCTaGGTAGAAATCAAAGGCATT | + |
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Preference number: 2 (lower is better) Translates to: LDSCSQTNQRHRAWRQSDPGDSL*VEIKGI Trigger: AATGCCTTTGATTTCTACTCAGAGTGAGTCCCCTGG...ATCACTCTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTGAGAGCAGGAATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081438.10 |
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| 3UTR-3UTR CCA 90 bp | TCCCTAAGCATACAGCACAAACATAGGCAGGGACTGGCAGGCCTCCAAGGCCATGGAAACAATATTTCTTaGGGCAACCAGTCAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SLSIQHKHRQGLAGLQGHGNNIS*GNQSRR Trigger: TCTTCTTGACTGGTTGCCCCAAGAAATATTGTTTCC...ATGGCCTTGGAGGCCTGCCAGTCCCTGCCTATGTTTGTGCTGTATGCTTAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081438.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGGTAGTAGTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGACCAGGGGACTCACTCTaGGTAGAAATCAAAGGCATT | + |
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Preference number: 2 (lower is better) Translates to: AEVVVKFKVGLRQLLSERPGDSL*VEIKGI Trigger: AATGCCTTTGATTTCTACTCAGAGTGAGTCCCCTGG...TCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCACTACTACCTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| 3UTR-3UTR CAA 90 bp | CAAACTAACCAGAGACACAGAGCCTGGAGACAGAGTGATTTGTGGAGGAACATGTGGAGCGTTGGAGAGTaGAGGTTCCAGGGGACTCAC | + |
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Preference number: 3 (lower is better) Translates to: QTNQRHRAWRQSDLWRNMWSVGE*RFQGTH Trigger: GTGAGTCCCCTGGAACCTCAACTCTCCAACGCTCCA...CATGTTCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGTAGTAGTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGAGAGTGGAGCGTTGGAGAGTaGAGGTTCCAGGGGACTCAC | + |
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Preference number: 3 (lower is better) Translates to: EVVVKFKVGLRQLLSEREWSVGE*RFQGTH Trigger: GTGAGTCCCCTGGAACCTCAACTCTCCAACGCTCCA...CTCTCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCACTACTACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| 3UTR-3UTR CAA 90 bp | GTAGTAGTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGAGAGAGACAGAAGTCAGCTTCCTaGCTGGATCTTCACGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: VVVKFKVGLRQLLSERERQKSAS*LDLHGP Trigger: AGGGCCGTGAAGATCCAGCAAGGAAGCTGACTTCTG...TCTCTCTCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCACTACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121838.2 |
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| 3UTR CCA 72 bp | GATTCCTGCTCTCAAACTAACCAGAGACACAGAGCCTaGAGACAGAGTGATTTGTGGAGGAACATGTCGATC | + |
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Preference number: 3 (lower is better) Translates to: DSCSQTNQRHRA*RQSDLWRNMSI Trigger: GATCGACATGTTCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTGAGAGCAGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| 3UTR TCA 72 bp | CTTAGACAACTTCTCTCGGAAAGAGAGAGAGGACGGTaGAACCCATTTGGTAAGATTTCCCTTACACCTCGT | + |
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Preference number: 3 (lower is better) Translates to: LRQLLSERERGR*NPFGKISLTPR Trigger: ACGAGGTGTAAGGGAAATCTTACCAAATGGGTTTCACCGTCCTCTCTCTCTTTCCGAGAGAAGTTGTCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR GCA 90 bp | CTGGCAGGCCTCCAAGGCCATAGGGCTCCTCCCAGGGCCGTCAAGCACAGGTGGAGAGGGCCCCGCGAGTaGGCGCAGCACGTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LAGLQGHRAPPRAVKHRWRGPRE*AQHVGQ Trigger: CTGGCCAACGTGCTGCGCGCACTCGCGGGGCCCTCT...CCACCTGTGCTTGACGGCCCTGGGAGGAGCCCTATGGCCTTGGAGGCCTGCCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR TCA 90 bp | CTGGCAGGCCTCCAAGGCCATAGGGCTCCTCCCAGGGCCGTCAAGCACAGGTGGGTCAGCTGCGGCCAGTaGAGTCACGAACACGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: LAGLQGHRAPPRAVKHRWVSCGQ*SHEHVG Trigger: ACCAACGTGTTCGTGACTTCACTGGCCGCAGCTGAC...CCACCTGTGCTTGACGGCCCTGGGAGGAGCCCTATGGCCTTGGAGGCCTGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | CTGGCAGGCCTCCAAGGCCATAGGGCTCCTCCCAGGGCCGTCAAGCACAGGTGGCAATGTGGCCCCTGGTaGCATTACGAGGAGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LAGLQGHRAPPRAVKHRWQCGPW*HYEESH Trigger: GTGGGACTCCTCGTAATGCCACCAGGGGCCACATTG...CCACCTGTGCTTGACGGCCCTGGGAGGAGCCCTATGGCCTTGGAGGCCTGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | CTGGCAGGCCTCCAAGGCCATAGGGCTCCTCCCAGGGCCGTCAAGCACAGGTGGCCTACACGCCACCACTaGCTCATGATGGGCGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LAGLQGHRAPPRAVKHRWPTRHH*LMMGAK Trigger: CTTTGCGCCCATCATGAGCCAGTGGTGGCGTGTAGG...CCACCTGTGCTTGACGGCCCTGGGAGGAGCCCTATGGCCTTGGAGGCCTGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | GCTCTCTTTTCCCTAAGCATACAGCACAAACATAGGCAGGGACTGGCAGGCCTCCGGGTGTCCCGCCTGTaGCAGGGGACGGAGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: ALFSLSIQHKHRQGLAGLRVSRL*QGTESA Trigger: CGCGCTCTCCGTCCCCTGCCACAGGCGGGACACCCG...GAGGCCTGCCAGTCCCTGCCTATGTTTGTGCTGTATGCTTAGGGAAAAGAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR TCA 90 bp | GCTCTCTTTTCCCTAAGCATACAGCACAAACATAGGCAGGGACTGGCAGGCCTCGGCTGGCTGGGAAGGTaGCTGCGCGTGGCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: ALFSLSIQHKHRQGLAGLGWLGR*LRVAPP Trigger: CGGAGGAGCCACGCGCAGTCACCTTCCCAGCCAGCC...GAGGCCTGCCAGTCCCTGCCTATGTTTGTGCTGTATGCTTAGGGAAAAGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | CACAGGTGGCCTGCCGTCCCAGCTGCTGAGGTAGTAGTGAAGTTCAAGGTGGGTCTCCTGGCAACCCACTaGTGTTGGCTGCACTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HRWPAVPAAEVVVKFKVGLLATH*CWLHWG Trigger: ACCCCAGTGCAGCCAACACCAGTGGGTTGCCAGGAG...ACCCACCTTGAACTTCACTACTACCTCAGCAGCTGGGACGGCAGGCCACCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR TCA 90 bp | TCCCTAAGCATACAGCACAAACATAGGCAGGGACTGGCAGGCCTCCAAGGCCATGCCACCACTGGCTCATaGTGGGCGCAAAGGACACGG | + |
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Preference number: 4 (lower is better) Translates to: SLSIQHKHRQGLAGLQGHATTGS*WAQRTR Trigger: CCGTGTCCTTTGCGCCCATCATGAGCCAGTGGTGGC...ATGGCCTTGGAGGCCTGCCAGTCCCTGCCTATGTTTGTGCTGTATGCTTAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR GCA 90 bp | GCTCTCAAACTAACCAGAGACACAGAGCCTGGAGACAGAGTGATTTGTGGAGGAAGAGGGCCCCGCGAGTaGGCGCAGCACGTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ALKLTRDTEPGDRVICGGRGPRE*AQHVGQ Trigger: CTGGCCAACGTGCTGCGCGCACTCGCGGGGCCCTCT...TCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTGAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR TCA 90 bp | CACAGGTGGCCTGCCGTCCCAGCTGCTGAGGTAGTAGTGAAGTTCAAGGTGGGTAACGCAAAGGGTTGGTaGCAGCTAGGTAGCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: HRWPAVPAAEVVVKFKVGNAKGW*QLGSGP Trigger: TGGACCGCTACCTAGCTGTCACCAACCCTTTGCGTT...ACCCACCTTGAACTTCACTACTACCTCAGCAGCTGGGACGGCAGGCCACCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR GCA 90 bp | GCTCTCAAACTAACCAGAGACACAGAGCCTGGAGACAGAGTGATTTGTGGAGGAGGCCAGCGCCAGCAATaGCCCAGCCAATGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ALKLTRDTEPGDRVICGGGQRQQ*PSQCRC Trigger: GCAGCGGCATTGGCTGGGGCATTGCTGGCGCTGGCC...TCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | GCTCTCTTTTCCCTAAGCATACAGCACAAACATAGGCAGGGACTGGCAGGCCTCGCAACCCACTGGTGTTaGCTGCACTGGGGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ALFSLSIQHKHRQGLAGLATHWC*LHWGPG Trigger: CCCTGGACCCCAGTGCAGCCAACACCAGTGGGTTGC...GAGGCCTGCCAGTCCCTGCCTATGTTTGTGCTGTATGCTTAGGGAAAAGAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR TCA 90 bp | GTCTTAGACAACTTCTCTCGGAAAGAGAGAGAGGACGGTGAAACCCATTTGGTAGGCTGGCTGGGAAGGTaGCTGCGCGTGGCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: VLDNFSRKEREDGETHLVGWLGR*LRVAPP Trigger: CGGAGGAGCCACGCGCAGTCACCTTCCCAGCCAGCC...TACCAAATGGGTTTCACCGTCCTCTCTCTCTTTCCGAGAGAAGTTGTCTAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR GCA 90 bp | CAAACTAACCAGAGACACAGAGCCTGGAGACAGAGTGATTTGTGGAGGAACATGGGCCAGCGCCAGCAATaGCCCAGCCAATGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QTNQRHRAWRQSDLWRNMGQRQQ*PSQCRC Trigger: GCAGCGGCATTGGCTGGGGCATTGCTGGCGCTGGCC...CATGTTCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | CACAGGTGGCCTGCCGTCCCAGCTGCTGAGGTAGTAGTGAAGTTCAAGGTGGGTCGAACACGTTGGTTATaGTCTGTAGTCTCGGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: HRWPAVPAAEVVVKFKVGRTRWL*SVVSAC Trigger: GCACGCCGAGACTACAGACCATAACCAACGTGTTCG...ACCCACCTTGAACTTCACTACTACCTCAGCAGCTGGGACGGCAGGCCACCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | AGCATACAGCACAAACATAGGCAGGGACTGGCAGGCCTCCAAGGCCATAGGGCTAACAGCAGCGCGGATTaGAGTGGCATTCCTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SIQHKHRQGLAGLQGHRANSSAD*SGIPVP Trigger: AGGCACAGGAATGCCACTCCAATCCGCGCTGCTGTT...AGCCCTATGGCCTTGGAGGCCTGCCAGTCCCTGCCTATGTTTGTGCTGTATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | AACAATATTTCTTGGGGCAACCAGTCAAGAAGATGGGGATCAAGCAAGCTTCCTCGGGTGTCCCGCCTGTaGCAGGGGACGGAGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: NNISWGNQSRRWGSSKLPRVSRL*QGTESA Trigger: CGCGCTCTCCGTCCCCTGCCACAGGCGGGACACCCG...AGGAAGCTTGCTTGATCCCCATCTTCTTGACTGGTTGCCCCAAGAAATATTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081438.10 |
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| CDS-3UTR CCA 90 bp | GACACAGAGCCTGGAGACAGAGTGATTTGTGGAGGAACATGTCGATCATCAGGGGCGGTGGACTCTGCCTaGCTTCAACAGGGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: DTEPGDRVICGGTCRSSGAVDSA*LQQGWL Trigger: CAGCCAGCCCTGTTGAAGCCAGGCAGAGTCCACCGC...CCCTGATGATCGACATGTTCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | GCTCTCTTTTCCCTAAGCATACAGCACAAACATAGGCAGGGACTGGCAGGCCTCCAATGTGGCCCCTGGTaGCATTACGAGGAGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ALFSLSIQHKHRQGLAGLQCGPW*HYEESH Trigger: GTGGGACTCCTCGTAATGCCACCAGGGGCCACATTG...GAGGCCTGCCAGTCCCTGCCTATGTTTGTGCTGTATGCTTAGGGAAAAGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR GCA 90 bp | TTTTTCCTGGATTCCTGCTCTCAAACTAACCAGAGACACAGAGCCTGGAGACAGCCCACTGGTGTTGGCTaGACTGGGGTCCAGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FFLDSCSQTNQRHRAWRQPTGVG*TGVQGR Trigger: CCTACCCTGGACCCCAGTGCAGCCAACACCAGTGGG...CTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTGAGAGCAGGAATCCAGGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081438.10 |
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| CDS-3UTR CCA 90 bp | TCCCTAAGCATACAGCACAAACATAGGCAGGGACTGGCAGGCCTCCAAGGCCATCGAACACGTTGGTTATaGTCTGTAGTCTCGGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: SLSIQHKHRQGLAGLQGHRTRWL*SVVSAC Trigger: GCACGCCGAGACTACAGACCATAACCAACGTGTTCG...ATGGCCTTGGAGGCCTGCCAGTCCCTGCCTATGTTTGTGCTGTATGCTTAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | CACAGAGCCTGGAGACAGAGTGATTTGTGGAGGAACATGTCGATCATCAGGGTTTCGCCCAAGGGCCAATaGCCAGTCAGCGCCAATGTG | + |
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Preference number: 4 (lower is better) Translates to: HRAWRQSDLWRNMSIIRVSPKGQ*PVSANV Trigger: CACATTGGCGCTGACTGGCCATTGGCCCTTGGGCGA...AACCCTGATGATCGACATGTTCCTCCACAAATCACTCTGTCTCCAGGCTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | AAGGGAGGGAGGGGTGCTCTCTTTTCCCTAAGCATACAGCACAAACATAGGCAGCCTACACGCCACCACTaGCTCATGATGGGCGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: KGGRGALFSLSIQHKHRQPTRHH*LMMGAK Trigger: CTTTGCGCCCATCATGAGCCAGTGGTGGCGTGTAGG...CTGCCTATGTTTGTGCTGTATGCTTAGGGAAAAGAGAGCACCCCTCCCTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR TCA 90 bp | GCTCTCAAACTAACCAGAGACACAGAGCCTGGAGACAGAGTGATTTGTGGAGGAGTCAGCTGCGGCCAGTaGAGTCACGAACACGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: ALKLTRDTEPGDRVICGGVSCGQ*SHEHVG Trigger: ACCAACGTGTTCGTGACTTCACTGGCCGCAGCTGAC...TCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR GCA 90 bp | GCTGAGGTAGTAGTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGACTGTGCCTCGGCATCTaGCCCTACACGCCACCACTG | + |
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Preference number: 4 (lower is better) Translates to: AEVVVKFKVGLRQLLSERLCLGI*PYTPPL Trigger: CAGTGGTGGCGTGTAGGGGCAGATGCCGAGGCACAG...TCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCACTACTACCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | GTCTTAGACAACTTCTCTCGGAAAGAGAGAGAGGACGGTGAAACCCATTTGGTAGCAACCCACTGGTGTTaGCTGCACTGGGGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VLDNFSRKEREDGETHLVATHWC*LHWGPG Trigger: CCCTGGACCCCAGTGCAGCCAACACCAGTGGGTTGC...TACCAAATGGGTTTCACCGTCCTCTCTCTCTTTCCGAGAGAAGTTGTCTAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | GTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGAGAGAGAGGACGGTGCCCATGGTACTCCTaGCAACCCACTGGTGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: VKFKVGLRQLLSERERGRCPWYS*QPTGVG Trigger: GCCAACACCAGTGGGTTGCCAGGAGTACCATGGGCA...CCGTCCTCTCTCTCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | GTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGAGAGAGAGGACGGCAATGCCGCTGCCCATaGTACTCCTGGCAACCCACT | + |
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Preference number: 4 (lower is better) Translates to: VKFKVGLRQLLSERERGRQCRCP*YSWQPT Trigger: AGTGGGTTGCCAGGAGTACCATGGGCAGCGGCATTG...CCGTCCTCTCTCTCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCCTGGATTCCTGCTCTCAAACTAACCAGAGACACAGAGCCTGGAGACAGTCGCCCAAGGGCCAATaGCCAGTCAGCGCCAATGTG | + |
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Preference number: 4 (lower is better) Translates to: FFLDSCSQTNQRHRAWRQSPKGQ*PVSANV Trigger: CACATTGGCGCTGACTGGCCATTGGCCCTTGGGCGA...CTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTGAGAGCAGGAATCCAGGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081438.10 |
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| CDS-3UTR CCA 90 bp | GACACAGAGCCTGGAGACAGAGTGATTTGTGGAGGAACATGTCGATCATCAGGGAACAGCAGCGCGGATTaGAGTGGCATTCCTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: DTEPGDRVICGGTCRSSGNSSAD*SGIPVP Trigger: AGGCACAGGAATGCCACTCCAATCCGCGCTGCTGTT...CCCTGATGATCGACATGTTCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | GAGGTAGTAGTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGAGAGGCGGTGGACTCTGCCTaGCTTCAACAGGGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: EVVVKFKVGLRQLLSEREAVDSA*LQQGWL Trigger: CAGCCAGCCCTGTTGAAGCCAGGCAGAGTCCACCGC...CTCTCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCACTACTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR TCA 90 bp | GAGCTGTTTTGTGCCTATTGTGAGAGATGGTCCAAGATGGTGCTTAGAGAGCCATGCGGGCGATGGCTATaGTTACCAGCAGGTTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ELFCAYCERWSKMVLREPCGRWL*LPAGCL Trigger: GAGGCAACCTGCTGGTAATCATAGCCATCGCCCGCA...TGGCTCTCTAAGCACCATCTTGGACCATCTCTCACAATAGGCACAAAACAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081438.10 |
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| CDS-3UTR TCA 90 bp | TTTTTCCTGGATTCCTGCTCTCAAACTAACCAGAGACACAGAGCCTGGAGACAGACAGAGCACGTCCACTaGCGTCCACAGTTCGCAACC | + |
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Preference number: 4 (lower is better) Translates to: FFLDSCSQTNQRHRAWRQTEHVH*RPQFAT Trigger: GGTTGCGAACTGTGGACGTCAGTGGACGTGCTCTGT...CTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTGAGAGCAGGAATCCAGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081438.10 |
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| CDS-3UTR TCA 90 bp | AGATGGTGCTTAGAGAGCCATAGTGAGGAGACAGGGATGAAACCTCAAACTTTTGCCACCACTGGCTCATaGTGGGCGCAAAGGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: RWCLESHSEETGMKPQTFATTGS*WAQRTR Trigger: CCGTGTCCTTTGCGCCCATCATGAGCCAGTGGTGGC...AAAAGTTTGAGGTTTCATCCCTGTCTCCTCACTATGGCTCTCTAAGCACCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081438.10 |
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| CDS-3UTR CCA 90 bp | GTCTTAGACAACTTCTCTCGGAAAGAGAGAGAGGACGGTGAAACCCATTTGGTATTCAACAGGGCTGGCTaGGAAGGTGACTGCGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLDNFSRKEREDGETHLVFNRAG*EGDCAW Trigger: CCACGCGCAGTCACCTTCCCAGCCAGCCCTGTTGAA...TACCAAATGGGTTTCACCGTCCTCTCTCTCTTTCCGAGAGAAGTTGTCTAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | GCTGAGGTAGTAGTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGACAATGCCGCTGCCCATaGTACTCCTGGCAACCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AEVVVKFKVGLRQLLSERQCRCP*YSWQPT Trigger: AGTGGGTTGCCAGGAGTACCATGGGCAGCGGCATTG...TCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCACTACTACCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | CAAAGGCATTATAAAAATGTTGCATCCATAGCCGTTGCTTGTCTTTCTGGAGGATTCAACAGGGCTGGCTaGGAAGGTGACTGCGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRHYKNVASIAVACLSGGFNRAG*EGDCAW Trigger: CCACGCGCAGTCACCTTCCCAGCCAGCCCTGTTGAA...TCCTCCAGAAAGACAAGCAACGGCTATGGATGCAACATTTTTATAATGCCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR TCA 90 bp | CAAAGGCATTATAAAAATGTTGCATCCATAGCCGTTGCTTGTCTTTCTGGAGGATGCGGGCGATGGCTATaGTTACCAGCAGGTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRHYKNVASIAVACLSGGCGRWL*LPAGCL Trigger: GAGGCAACCTGCTGGTAATCATAGCCATCGCCCGCA...TCCTCCAGAAAGACAAGCAACGGCTATGGATGCAACATTTTTATAATGCCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR GCA 90 bp | AATCAAAGGCATTATAAAAATGTTGCATCCATAGCCGTTGCTTGTCTTTCTGGACCCACTGGTGTTGGCTaGACTGGGGTCCAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NQRHYKNVASIAVACLSGPTGVG*TGVQGR Trigger: CCTACCCTGGACCCCAGTGCAGCCAACACCAGTGGG...TCCAGAAAGACAAGCAACGGCTATGGATGCAACATTTTTATAATGCCTTTGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| 3UTR CAA 72 bp | ACTAACCAGAGACACAGAGCCTGGAGACAGAGTGATTaGTGGAGGAACATGTCGATCATCAGGGTTAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TNQRHRAWRQSD*WRNMSIIRVRK Trigger: TTTCCTAACCCTGATGATCGACATGTTCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTCTCTGGTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR TCA 90 bp | AGGCATTATAAAAATGTTGCATCCATAGCCGTTGCTTGTCTTTCTGGAGGAAAAAACGCAAAGGGTTGGTaGCAGCTAGGTAGCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RHYKNVASIAVACLSGGKNAKGW*QLGSGP Trigger: TGGACCGCTACCTAGCTGTCACCAACCCTTTGCGTT...TTTTCCTCCAGAAAGACAAGCAACGGCTATGGATGCAACATTTTTATAATGCCT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | AATCAAAGGCATTATAAAAATGTTGCATCCATAGCCGTTGCTTGTCTTTCTGGATGCCCATGGTACTCCTaGCAACCCACTGGTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NQRHYKNVASIAVACLSGCPWYS*QPTGVG Trigger: GCCAACACCAGTGGGTTGCCAGGAGTACCATGGGCA...TCCAGAAAGACAAGCAACGGCTATGGATGCAACATTTTTATAATGCCTTTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CCA 90 bp | GAGGTAGTAGTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGAGAGAAGTCACGAACACGTTaGTTATGGTCTGTAGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EVVVKFKVGLRQLLSEREKSRTR*LWSVVS Trigger: CGAGACTACAGACCATAACCAACGTGTTCGTGACTT...CTCTCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCACTACTACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGTAGTAGTGAAGTTCAAGGTGGGTCTTAGACAACTTCTCTCGGAAAGAAAGTCACGAACACGTTaGTTATGGTCTGTAGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AEVVVKFKVGLRQLLSERKSRTR*LWSVVS Trigger: CGAGACTACAGACCATAACCAACGTGTTCGTGACTT...TCTTTCCGAGAGAAGTTGTCTAAGACCCACCTTGAACTTCACTACTACCTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS GCA 90 bp | GGGCGCAAAGGACACGGCAGCGGACACGATCCACACCAGGACAACTaGCGCGCGGGCGCGGCGCTTGGTAACCAGCGTGCCGTAACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GRKGHGSGHDPHQDN*RAGAALGNQRAVTQ Trigger: TTGCGTTACGGCACGCTGGTTACCAAGCGCCGCGCCCGCGCGGCAGTTGTCCTGGTGTGGATCGTGTCCGCTGCCGTGTCCTTTGCGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS GCA 90 bp | CGGTGGACTCTGCCTGGCTTCAACAGGGCTGGCTGGGAAGGTGACTaGGCGTGGCTCCTCCGGTCCACGGCCACCGTAGCTACACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RWTLPGFNRAGWEGD*AWLLRSTATVATQK Trigger: CTTCTGTGTAGCTACGGTGGCCGTGGACCGGAGGAGCCACGCGCAGTCACCTTCCCAGCCAGCCCTGTTGAAGCCAGGCAGAGTCCACCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 90 bp | ACTCTGCCTGGCTTCAACAGGGCTGGCTGGGAAGGTGACTGCGCGTaGCTCCTCCGGTCCACGGCCACCGTAGCTACACAGAAGACGACG | + |
|
Preference number: 5 (lower is better) Translates to: TLPGFNRAGWEGDCA*LLRSTATVATQKTT Trigger: CGTCGTCTTCTGTGTAGCTACGGTGGCCGTGGACCGGAGGAGCCACGCGCAGTCACCTTCCCAGCCAGCCCTGTTGAAGCCAGGCAGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 90 bp | GAGTGGCATTCCTGTGCCTCGGCATCTGCCCCTACACGCCACCACTaGCTCATGATGGGCGCAAAGGACACGGCAGCGGACACGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EWHSCASASAPTRHH*LMMGAKDTAADTIH Trigger: GTGGATCGTGTCCGCTGCCGTGTCCTTTGCGCCCATCATGAGCCAGTGGTGGCGTGTAGGGGCAGATGCCGAGGCACAGGAATGCCACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS TCA 90 bp | ATTCCTGTGCCTCGGCATCTGCCCCTACACGCCACCACTGGCTCATaGTGGGCGCAAAGGACACGGCAGCGGACACGATCCACACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IPVPRHLPLHATTGS*WAQRTRQRTRSTPG Trigger: TCCTGGTGTGGATCGTGTCCGCTGCCGTGTCCTTTGCGCCCATCATGAGCCAGTGGTGGCGTGTAGGGGCAGATGCCGAGGCACAGGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS GCA 90 bp | GGAACAGCAGCGCGGATTGGAGTGGCATTCCTGTGCCTCGGCATCTaGCCCTACACGCCACCACTGGCTCATGATGGGCGCAAAGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GTAARIGVAFLCLGI*PYTPPLAHDGRKGH Trigger: GTGTCCTTTGCGCCCATCATGAGCCAGTGGTGGCGTGTAGGGGCAGATGCCGAGGCACAGGAATGCCACTCCAATCCGCGCTGCTGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 90 bp | AGTTTCGCCCAAGGGCCAATGGCCAGTCAGCGCCAATGTGGCCCCTaGTGGCATTACGAGGAGTCCCACTACCAAGTCAGCTGCGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SFAQGPMASQRQCGP*WHYEESHYQVSCGQ Trigger: CTGGCCGCAGCTGACTTGGTAGTGGGACTCCTCGTAATGCCACCAGGGGCCACATTGGCGCTGACTGGCCATTGGCCCTTGGGCGAAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS GCA 90 bp | GTTGGAGGCAAAGGAACAGCAGCGCGGATTGGAGTGGCATTCCTGTaGCTCGGCATCTGCCCCTACACGCCACCACTGGCTCATGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGGKGTAARIGVAFL*LGICPYTPPLAHDG Trigger: CCCATCATGAGCCAGTGGTGGCGTGTAGGGGCAGATGCCGAGGCACAGGAATGCCACTCCAATCCGCGCTGCTGTTCCTTTGCCTCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 90 bp | CGCAACCAGTTTCGCCCAAGGGCCAATGGCCAGTCAGCGCCAATGTaGCCCCTGGTGGCATTACGAGGAGTCCCACTACCAAGTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RNQFRPRANGQSAPM*PLVALRGVPLPSQL Trigger: CAGCTGACTTGGTAGTGGGACTCCTCGTAATGCCACCAGGGGCCACATTGGCGCTGACTGGCCATTGGCCCTTGGGCGAAACTGGTTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 90 bp | TCCACTGACGTCCACAGTTCGCAACCAGTTTCGCCCAAGGGCCAATaGCCAGTCAGCGCCAATGTGGCCCCTGGTGGCATTACGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: STDVHSSQPVSPKGQ*PVSANVAPGGITRS Trigger: ACTCCTCGTAATGCCACCAGGGGCCACATTGGCGCTGACTGGCCATTGGCCCTTGGGCGAAACTGGTTGCGAACTGTGGACGTCAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 90 bp | GGGAAACGGACGCGCACCTTCATAGCCATCAAACCTGTTGAGCGGTaGACTCTGCCTGGCTTCAACAGGGCTGGCTGGGAAGGTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKRTRTFIAIKPVER*TLPGFNRAGWEGDC Trigger: GCAGTCACCTTCCCAGCCAGCCCTGTTGAAGCCAGGCAGAGTCCACCGCTCAACAGGTTTGATGGCTATGAAGGTGCGCGTCCGTTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CAA 90 bp | CACAGGTGGCCTGCCGTCCCAGCTGCTGAGGTAGTAGTGAAGTTCAAGGTGGGTATGATTACCAGCAGGTaGCCTCCCACCGTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HRWPAVPAAEVVVKFKVGMITSR*PPTVAS Trigger: GCTGGCCACGGTGGGAGGCAACCTGCTGGTAATCAT...ACCCACCTTGAACTTCACTACTACCTCAGCAGCTGGGACGGCAGGCCACCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS TCA 90 bp | CCAGACAGGTATAGAGATGCCTGGGTTCCCGAAGAAGGGAACTGTTaGGCGGTGGACTCTGCCTGGCTTCAACAGGGCTGGCTGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PDRYRDAWVPEEGNC*AVDSAWLQQGWLGR Trigger: CCTTCCCAGCCAGCCCTGTTGAAGCCAGGCAGAGTCCACCGCTCAACAGTTCCCTTCTTCGGGAACCCAGGCATCTCTATACCTGTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117565.2 |
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| CDS CCA 90 bp | GGTATAGAGATGCCTGGGTTCCCGAAGAAGGGAACTGTTGAGCGGTaGACTCTGCCTGGCTTCAACAGGGCTGGCTGGGAAGGTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GIEMPGFPKKGTVER*TLPGFNRAGWEGDC Trigger: GCAGTCACCTTCCCAGCCAGCCCTGTTGAAGCCAGGCAGAGTCCACCGCTCAACAGTTCCCTTCTTCGGGAACCCAGGCATCTCTATACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117565.2 |
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| CDS CCA 90 bp | GAAGGTAGAAGGAGACGGAGGAGGAGAGCAGCGCATAGGGCATGTTaGAGGCAAAGGAACAGCAGCGCGGATTGGAGTGGCATTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGRRRRRRRAAHRAC*RQRNSSADWSGIPV Trigger: CACAGGAATGCCACTCCAATCCGCGCTGCTGTTCCTTTGCCTCCAACATGCCCTATGCGCTGCTCTCCTCCTCCGTCTCCTTCTACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS-3UTR CAA 90 bp | GCTCTCAAACTAACCAGAGACACAGAGCCTGGAGACAGAGTGATTTGTGGAGGAGGCAACCCACTGGTGTaGGCTGCACTGGGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALKLTRDTEPGDRVICGGGNPLV*AALGSR Trigger: CCTGGACCCCAGTGCAGCCAACACCAGTGGGTTGCC...TCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CAA 90 bp | GCTCTCAAACTAACCAGAGACACAGAGCCTGGAGACAGAGTGATTTGTGGAGGAATGATTACCAGCAGGTaGCCTCCCACCGTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALKLTRDTEPGDRVICGGMITSR*PPTVAS Trigger: GCTGGCCACGGTGGGAGGCAACCTGCTGGTAATCAT...TCCTCCACAAATCACTCTGTCTCCAGGCTCTGTGTCTCTGGTTAGTTTGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CAA 90 bp | AATCAAAGGCATTATAAAAATGTTGCATCCATAGCCGTTGCTTGTCTTTCTGGAGGCAACCCACTGGTGTaGGCTGCACTGGGGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NQRHYKNVASIAVACLSGGNPLV*AALGSR Trigger: CCTGGACCCCAGTGCAGCCAACACCAGTGGGTTGCC...TCCAGAAAGACAAGCAACGGCTATGGATGCAACATTTTTATAATGCCTTTGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS-3UTR CAA 90 bp | CAAAGGCATTATAAAAATGTTGCATCCATAGCCGTTGCTTGTCTTTCTGGAGGAGAACAGCAGCGCGGATaGGAGTGGCATTCCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QRHYKNVASIAVACLSGGEQQRG*EWHSCA Trigger: GGCACAGGAATGCCACTCCAATCCGCGCTGCTGTTC...TCCTCCAGAAAGACAAGCAACGGCTATGGATGCAACATTTTTATAATGCCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS GCA 72 bp | GGACACGGCAGCGGACACGATCCACACCAGGACAACTaGCGCGCGGGCGCGGCGCTTGGTAACCAGCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GHGSGHDPHQDN*RAGAALGNQRA Trigger: GGCACGCTGGTTACCAAGCGCCGCGCCCGCGCGGCAGTTGTCCTGGTGTGGATCGTGTCCGCTGCCGTGTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 72 bp | GAGCGGTGGACTCTGCCTGGCTTCAACAGGGCTGGCTaGGAAGGTGACTGCGCGTGGCTCCTCCGGTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: ERWTLPGFNRAG*EGDCAWLLRST Trigger: CGTGGACCGGAGGAGCCACGCGCAGTCACCTTCCCAGCCAGCCCTGTTGAAGCCAGGCAGAGTCCACCGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS GCA 72 bp | CGTGGCCAGCGCCAGCAATGCCCCAGCCAATGCCGCTaGCCATGGTACTCCTGGCAACCCACTGGTGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGQRQQCPSQCR*PWYSWQPTGVG Trigger: GCCAACACCAGTGGGTTGCCAGGAGTACCATGGGCAGCGGCATTGGCTGGGGCATTGCTGGCGCTGGCCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS TCA 72 bp | CCTCGGCATCTGCCCCTACACGCCACCACTGGCTCATaGTGGGCGCAAAGGACACGGCAGCGGACACGATCC | + |
|
Preference number: 6 (lower is better) Translates to: PRHLPLHATTGS*WAQRTRQRTRS Trigger: GGATCGTGTCCGCTGCCGTGTCCTTTGCGCCCATCATGAGCCAGTGGTGGCGTGTAGGGGCAGATGCCGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS GCA 72 bp | GCGCGGATTGGAGTGGCATTCCTGTGCCTCGGCATCTaGCCCTACACGCCACCACTGGCTCATGATGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARIGVAFLCLGI*PYTPPLAHDGR Trigger: GCGCCCATCATGAGCCAGTGGTGGCGTGTAGGGGCAGATGCCGAGGCACAGGAATGCCACTCCAATCCGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 72 bp | TCCTGTGCCTCGGCATCTGCCCCTACACGCCACCACTaGCTCATGATGGGCGCAAAGGACACGGCAGCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SCASASAPTRHH*LMMGAKDTAAD Trigger: GTCCGCTGCCGTGTCCTTTGCGCCCATCATGAGCCAGTGGTGGCGTGTAGGGGCAGATGCCGAGGCACAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS GCA 72 bp | TGCCCATGGTACTCCTGGCAACCCACTGGTGTTGGCTaGACTGGGGTCCAGGGTAGGGGCGTCCGACCACAA | + |
|
Preference number: 6 (lower is better) Translates to: CPWYSWQPTGVG*TGVQGRGVRPQ Trigger: TTGTGGTCGGACGCCCCTACCCTGGACCCCAGTGCAGCCAACACCAGTGGGTTGCCAGGAGTACCATGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS GCA 72 bp | TCGGGCGAGAAGCGGCCCAGTTCCCGGCGCAGCAAATaGCGTTGGCGCTTAGCCACAACGAACACTCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SGEKRPSSRRSK*RWRLATTNTRA Trigger: TGCTCGAGTGTTCGTTGTGGCTAAGCGCCAACGGCATTTGCTGCGCCGGGAACTGGGCCGCTTCTCGCCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 72 bp | CAATGCCCCAGCCAATGCCGCTGCCCATGGTACTCCTaGCAACCCACTGGTGTTGGCTGCACTGGGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QCPSQCRCPWYS*QPTGVGCTGVQ Trigger: CTGGACCCCAGTGCAGCCAACACCAGTGGGTTGCCAGGAGTACCATGGGCAGCGGCATTGGCTGGGGCATTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
||
| CDS CCA 72 bp | GGGCCAATGGCCAGTCAGCGCCAATGTGGCCCCTGGTaGCATTACGAGGAGTCCCACTACCAAGTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPMASQRQCGPW*HYEESHYQVSC Trigger: GCAGCTGACTTGGTAGTGGGACTCCTCGTAATGCCACCAGGGGCCACATTGGCGCTGACTGGCCATTGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CAA 90 bp | CTCCTCGGGCGAGAAGCGGCCCAGTTCCCGGCGCAGCAAATGCCGTaGGCGCTTAGCCACAACGAACACTCGAGCATAGACGAAGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLGREAAQFPAQQMP*ALSHNEHSSIDEEH Trigger: ATGCTCTTCGTCTATGCTCGAGTGTTCGTTGTGGCTAAGCGCCAACGGCATTTGCTGCGCCGGGAACTGGGCCGCTTCTCGCCCGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
||
| CDS GCA 72 bp | AAAGGAACAGCAGCGCGGATTGGAGTGGCATTCCTGTaGCTCGGCATCTGCCCCTACACGCCACCACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KGTAARIGVAFL*LGICPYTPPLA Trigger: AGCCAGTGGTGGCGTGTAGGGGCAGATGCCGAGGCACAGGAATGCCACTCCAATCCGCGCTGCTGTTCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
||
| CDS CCA 72 bp | CAAGGGCCAATGGCCAGTCAGCGCCAATGTGGCCCCTaGTGGCATTACGAGGAGTCCCACTACCAAGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGPMASQRQCGP*WHYEESHYQVS Trigger: GCTGACTTGGTAGTGGGACTCCTCGTAATGCCACCAGGGGCCACATTGGCGCTGACTGGCCATTGGCCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
||
| CDS CCA 72 bp | TTTCGCCCAAGGGCCAATGGCCAGTCAGCGCCAATGTaGCCCCTGGTGGCATTACGAGGAGTCCCACTACCA | + |
|
Preference number: 6 (lower is better) Translates to: FRPRANGQSAPM*PLVALRGVPLP Trigger: TGGTAGTGGGACTCCTCGTAATGCCACCAGGGGCCACATTGGCGCTGACTGGCCATTGGCCCTTGGGCGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 72 bp | GTCCACAGTTCGCAACCAGTTTCGCCCAAGGGCCAATaGCCAGTCAGCGCCAATGTGGCCCCTGGTGGCATT | + |
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Preference number: 6 (lower is better) Translates to: VHSSQPVSPKGQ*PVSANVAPGGI Trigger: AATGCCACCAGGGGCCACATTGGCGCTGACTGGCCATTGGCCCTTGGGCGAAACTGGTTGCGAACTGTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 72 bp | AGGAGACGGAGGAGGAGAGCAGCGCATAGGGCATGTTaGAGGCAAAGGAACAGCAGCGCGGATTGGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RRRRRRAAHRAC*RQRNSSADWSG Trigger: GCCACTCCAATCCGCGCTGCTGTTCCTTTGCCTCCAACATGCCCTATGCGCTGCTCTCCTCCTCCGTCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CAA 72 bp | CGAGAAGCGGCCCAGTTCCCGGCGCAGCAAATGCCGTaGGCGCTTAGCCACAACGAACACTCGAGCATAGAC | + |
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Preference number: 6 (lower is better) Translates to: REAAQFPAQQMP*ALSHNEHSSID Trigger: GTCTATGCTCGAGTGTTCGTTGTGGCTAAGCGCCAACGGCATTTGCTGCGCCGGGAACTGGGCCGCTTCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 72 bp | CCAAGTCAGCTGCGGCCAGTGAAGTCACGAACACGTTaGTTATGGTCTGTAGTCTCGGCGTGCGGGCGATGG | + |
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Preference number: 6 (lower is better) Translates to: PSQLRPVKSRTR*LWSVVSACGRW Trigger: CCATCGCCCGCACGCCGAGACTACAGACCATAACCAACGTGTTCGTGACTTCACTGGCCGCAGCTGACTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 72 bp | ATGTTGGAGGCAAAGGAACAGCAGCGCGGATTGGAGTaGCATTCCTGTGCCTCGGCATCTGCCCCTACACGC | + |
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Preference number: 6 (lower is better) Translates to: MLEAKEQQRGLE*HSCASASAPTR Trigger: GCGTGTAGGGGCAGATGCCGAGGCACAGGAATGCCACTCCAATCCGCGCTGCTGTTCCTTTGCCTCCAACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 72 bp | AGGGCATGTTGGAGGCAAAGGAACAGCAGCGCGGATTaGAGTGGCATTCCTGTGCCTCGGCATCTGCCCCTA | + |
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Preference number: 6 (lower is better) Translates to: RACWRQRNSSAD*SGIPVPRHLPL Trigger: TAGGGGCAGATGCCGAGGCACAGGAATGCCACTCCAATCCGCGCTGCTGTTCCTTTGCCTCCAACATGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081438.10 ENSMUST00000117565.2 ENSMUST00000121838.2 |
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| CDS CCA 72 bp | ATGCCTGGGTTCCCGAAGAAGGGAACTGTTGAGCGGTaGACTCTGCCTGGCTTCAACAGGGCTGGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: MPGFPKKGTVER*TLPGFNRAGWE Trigger: TTCCCAGCCAGCCCTGTTGAAGCCAGGCAGAGTCCACCGCTCAACAGTTCCCTTCTTCGGGAACCCAGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117565.2 |
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| CDS TCA 72 bp | GAAACGGACGCGCACCTTCATAGCCATCAAACCTGTTaGGCGGTGGACTCTGCCTGGCTTCAACAGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ETDAHLHSHQTC*AVDSAWLQQGW Trigger: CCAGCCCTGTTGAAGCCAGGCAGAGTCCACCGCTCAACAGGTTTGATGGCTATGAAGGTGCGCGTCCGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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| CDS CCA 72 bp | ACGCGCACCTTCATAGCCATCAAACCTGTTGAGCGGTaGACTCTGCCTGGCTTCAACAGGGCTGGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TRTFIAIKPVER*TLPGFNRAGWE Trigger: TTCCCAGCCAGCCCTGTTGAAGCCAGGCAGAGTCCACCGCTCAACAGGTTTGATGGCTATGAAGGTGCGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081438.10 ENSMUST00000121838.2 |
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