Pregenerated sensors for ADRB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035283Ensembl transcript IDs: ENSMUST00000038949.6
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCTGGCTAATTATCACCGGCCCCGCCCCCACACCAAACCTGAGCTaGATACTTAGGTTCCTAGGTGTGGAACCGGAAAGCCAGGTGATA | + |
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Preference number: 1 (lower is better) Translates to: SWLIITGPAPTPNLS*ILRFLGVEPESQVI Trigger: TATCACCTGGCTTTCCGGTTCCACACCTAGGAACCTAAGTATTCAGCTCAGGTTTGGTGTGGGGGCGGGGCCGGTGATAATTAGCCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR TCA 90 bp | GCAATAATCTCAACTGTTTCCTTTTTGTTCTGTCCTATCTTTAGTTaGCAGAGTCACATGTCACAGAGAGAGACTCAGCGCCTGGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: AIISTVSFLFCPIFS*QSHMSQRETQRLVL Trigger: AAGGACCAGGCGCTGAGTCTCTCTCTGTGACATGTGACTCTGTCAACTAAAGATAGGACAGAACAAAAAGGAAACAGTTGAGATTATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR GCA 90 bp | TTTCTCGAAACCAGATTTGTCTGTTTCGCATCCTTCTTTTCCCTTTaGTTTAAGAACAGGAGACACCAGTACTCCGGAATTAGTATGCAA | + |
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Preference number: 1 (lower is better) Translates to: FLETRFVCFASFFSL*FKNRRHQYSGISMQ Trigger: TTGCATACTAATTCCGGAGTACTGGTGTCTCCTGTTCTTAAAGCAAAGGGAAAAGAAGGATGCGAAACAGACAAATCTGGTTTCGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAACTCCTCCTAAACTTTCCTTTTTGCGCAAACGCTCGGTCCGGGGCTTTATCTCCTCTCTCCCCTaGGGAGCGGCTCAGGGGCGC | + |
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Preference number: 2 (lower is better) Translates to: LPTPPKLSFLRKRSVRGFISSLP*GAAQGR Trigger: GCGCCCCTGAGCCGCTCCCCAGGGGAGAGAGGAGAT...AAAGCCCCGGACCGAGCGTTTGCGCAAAAAGGAAAGTTTAGGAGGAGTTGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGGTAGAGGACCCACAGCAGGACCACCGAGGCGCGCAGGGCACAAGGTTTGATTCGATAGATCTGTaGGCTTTGCATTCACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SEVEDPQQDHRGAQGTRFDSIDL*ALHSPA Trigger: AGCAGGTGAATGCAAAGCCCACAGATCTATCGAATC...AAACCTTGTGCCCTGCGCGCCTCGGTGGTCCTGCTGTGGGTCCTCTACCTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR CCA 90 bp | CAACTGTTTCCTTTTTGTTCTGTCCTATCTTTAGTTGACAGAGTCACATGTCACTCCAGCCCGGGACTATaGGGAGCGGCGTCCGTGCGC | + |
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Preference number: 2 (lower is better) Translates to: QLFPFCSVLSLVDRVTCHSSPGL*GAASVR Trigger: GCGCACGGACGCCGCTCCCCATAGTCCCGGGCTGGA...GTGACATGTGACTCTGTCAACTAAAGATAGGACAGAACAAAAAGGAAACAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCGTCTTTGTTTTTAGCCACATGTGCAATAATCTCAACTGTTTCCTTTTTGGGGAGCGGCGTCCGTaGGCCCAGAGAGCCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: FAVFVFSHMCNNLNCFLFGERRP*AQRAWL Trigger: GAGCCAGGCTCTCTGGGCGCACGGACGCCGCTCCCC...AAAAAGGAAACAGTTGAGATTATTGCACATGTGGCTAAAAACAAAGACGGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTTTCTATCTTGCTGTGCAATATGCACAGAGTGAGGTAGAGGACCCACAGACCTGCTTTCGGTCTTaGGTAAACAGAGATCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KSFYLAVQYAQSEVEDPQTCFRS*VNRDLL Trigger: GAGGAGATCTCTGTTTACTCAAGACCGAAAGCAGGT...CTGTGGGTCCTCTACCTCACTCTGTGCATATTGCACAGCAAGATAGAAAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR GCA 90 bp | TCGCATCCTTCTTTTCCCTTTGCTTTAAGAACAGGAGACACCAGTACTCCGGAATTCCACTCGGGTCCTTaGAGAAAGTGTCAAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: SHPSFPFALRTGDTSTPEFHSGP*RKCQNP Trigger: TGGGTTTTGACACTTTCTGCAAGGACCCGAGTGGAA...TTCCGGAGTACTGGTGTCTCCTGTTCTTAAAGCAAAGGGAAAAGAAGGATGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR CAA 90 bp | AAGCAAGGTGAACCGTGCTCCACACATAGTTTCTCGAAACCAGATTaGTCTGTTTCGCATCCTTCTTTTCCCTTTGCTTTAAGAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: KQGEPCSTHSFSKPD*SVSHPSFPFALRTG Trigger: TCCTGTTCTTAAAGCAAAGGGAAAAGAAGGATGCGAAACAGACAAATCTGGTTTCGAGAAACTATGTGTGGAGCACGGTTCACCTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCGTCTTTGTTTTTAGCCACATGTGCAATAATCTCAACTGTTTCCTTTTTCCCCCACACCAAACCTaGGCTGAATACTTAGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: FAVFVFSHMCNNLNCFLFPPHQT*AEYLGS Trigger: GGAACCTAAGTATTCAGCTCAGGTTTGGTGTGGGGG...AAAAAGGAAACAGTTGAGATTATTGCACATGTGGCTAAAAACAAAGACGGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR TCA 90 bp | CAACTGTTTCCTTTTTGTTCTGTCCTATCTTTAGTTGACAGAGTCACATGTCACACACCAAACCTGAGCTaGATACTTAGGTTCCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: QLFPFCSVLSLVDRVTCHTPNLS*ILRFLG Trigger: ACCTAGGAACCTAAGTATTCAGCTCAGGTTTGGTGT...GTGACATGTGACTCTGTCAACTAAAGATAGGACAGAACAAAAAGGAAACAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCGTCTTTGTTTTTAGCCACATGTGCAATAATCTCAACTGTTTCCTTTTTGAGAGACTCAGCGCCTaGTCCTTCCAACTAGTATTG | + |
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Preference number: 2 (lower is better) Translates to: FAVFVFSHMCNNLNCFLFERLSA*SFQLVL Trigger: CAATACTAGTTGGAAGGACCAGGCGCTGAGTCTCTC...AAAAAGGAAACAGTTGAGATTATTGCACATGTGGCTAAAAACAAAGACGGCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR TCA 72 bp | ATTATCACCGGCCCCGCCCCCACACCAAACCTGAGCTaGATACTTAGGTTCCTAGGTGTGGAACCGGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: IITGPAPTPNLS*ILRFLGVEPES Trigger: GCTTTCCGGTTCCACACCTAGGAACCTAAGTATTCAGCTCAGGTTTGGTGTGGGGGCGGGGCCGGTGATAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR CAA 90 bp | AAGTCTTTCTATCTTGCTGTGCAATATGCACAGAGTGAGGTAGAGGACCCACAGATAGATCTGTGGGCTTaGCATTCACCTGCTTTCGGT | + |
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Preference number: 3 (lower is better) Translates to: KSFYLAVQYAQSEVEDPQIDLWA*HSPAFG Trigger: ACCGAAAGCAGGTGAATGCAAAGCCCACAGATCTAT...CTGTGGGTCCTCTACCTCACTCTGTGCATATTGCACAGCAAGATAGAAAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR-3UTR CAA 90 bp | CAACTGTTTCCTTTTTGTTCTGTCCTATCTTTAGTTGACAGAGTCACATGTCACACAAGTCTTTCTATCTaGCTGTGCAATATGCACAGA | + |
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Preference number: 3 (lower is better) Translates to: QLFPFCSVLSLVDRVTCHTSLSI*LCNMHR Trigger: TCTGTGCATATTGCACAGCAAGATAGAAAGACTTGT...GTGACATGTGACTCTGTCAACTAAAGATAGGACAGAACAAAAAGGAAACAGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | GCGGGCTCTCTTCCTCTAGGGATGCAGAGCCCGTGTCCAGCCCGGGACTATGGGGCGCTGAGCCCTCGCTaGCTGGAGGCAGCAGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: AGSLPLGMQSPCPARDYGALSPR*LEAAAR Trigger: CCTCGCTGCTGCCTCCAGCCAGCGAGGGCTCAGCGC...CCCATAGTCCCGGGCTGGACACGGGCTCTGCATCCCTAGAGGAAGAGAGCCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR GCA 90 bp | GCGGGCTCTCTTCCTCTAGGGATGCAGAGCCCGTGTCCAGCCCGGGACTATGGGAGATGGCCCACACTGTaGACACGAGGGCCCGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: AGSLPLGMQSPCPARDYGRWPTL*TRGPAL Trigger: GAGCGCGGGCCCTCGTGTGCACAGTGTGGGCCATCT...CCCATAGTCCCGGGCTGGACACGGGCTCTGCATCCCTAGAGGAAGAGAGCCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR GCA 90 bp | GCGGGCTCTCTTCCTCTAGGGATGCAGAGCCCGTGTCCAGCCCGGGACTATGGGTGGTTGTCCCGCCGTTaGAGCCGGTCCAGGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AGSLPLGMQSPCPARDYGWLSRR*SRSRAP Trigger: TGGAGCCCTGGACCGGCTGCAACGGCGGGACAACCA...CCCATAGTCCCGGGCTGGACACGGGCTCTGCATCCCTAGAGGAAGAGAGCCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | GCGGGCTCTCTTCCTCTAGGGATGCAGAGCCCGTGTCCAGCCCGGGACTATGGGAAGCCTTCACCACGTTaGCCAGGAAGAAGGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: AGSLPLGMQSPCPARDYGKPSPR*PGRRAA Trigger: GGCTGCCCTTCTTCCTGGCCAACGTGGTGAAGGCTT...CCCATAGTCCCGGGCTGGACACGGGCTCTGCATCCCTAGAGGAAGAGAGCCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR GCA 90 bp | CTCCCAACTCCTCCTAAACTTTCCTTTTTGCGCAAACGCTCGGTCCGGGGCTTTGCGACGGCCGCCGCTTaGTGGAGCGCCCGTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LPTPPKLSFLRKRSVRGFATAAA*WSARWP Trigger: TGGCCAACGGGCGCTCCAGCAAGCGGCGGCCGTCGC...AAAGCCCCGGACCGAGCGTTTGCGCAAAAAGGAAAGTTTAGGAGGAGTTGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | GCGGGCTCTCTTCCTCTAGGGATGCAGAGCCCGTGTCCAGCCCGGGACTATGGGTTCTTTACCTGTTTTTaGGCCTCGCGGAACACCCGC | + |
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Preference number: 4 (lower is better) Translates to: AGSLPLGMQSPCPARDYGFFTCF*ASRNTR Trigger: GCGGGTGTTCCGCGAGGCCCAAAAACAGGTAAAGAA...CCCATAGTCCCGGGCTGGACACGGGCTCTGCATCCCTAGAGGAAGAGAGCCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | CTCCCAACTCCTCCTAAACTTTCCTTTTTGCGCAAACGCTCGGTCCGGGGCTTTTCCGAGGAGAAGCCCTaGCGCCCCGGCTCGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPTPPKLSFLRKRSVRGFSEEKP*RPGSSR Trigger: CCTGGACGAGCCGGGGCGCCAGGGCTTCTCCTCGGA...AAAGCCCCGGACCGAGCGTTTGCGCAAAAAGGAAAGTTTAGGAGGAGTTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR TCA 90 bp | ACACGAAAGGCCGAACCTCAGAGAGAAAGGAACTCAAGACAAGCCAGTAAGCCACTGCGACAGCGGCGCTaGGCCCTCGCTGGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TRKAEPQRERNSRQASKPLRQRR*ALAGWR Trigger: CCTCCAGCCAGCGAGGGCTCAGCGCCGCTGTCGCAG...TGGCTTACTGGCTTGTCTTGAGTTCCTTTCTCTCTGAGGTTCGGCCTTTCGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR GCA 90 bp | CTCCCAACTCCTCCTAAACTTTCCTTTTTGCGCAAACGCTCGGTCCGGGGCTTTCGGCGGACGACAGGTTaGAGGGTTCGGAGGCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LPTPPKLSFLRKRSVRGFRRTTG*RVRRRP Trigger: TGGGCGCCTCCGAACCCTGCAACCTGTCGTCCGCCG...AAAGCCCCGGACCGAGCGTTTGCGCAAAAAGGAAAGTTTAGGAGGAGTTGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR GCA 90 bp | ACACGAAAGGCCGAACCTCAGAGAGAAAGGAACTCAAGACAAGCCAGTAAGCCACCCGCGGTCCACTGCTaGGACAGCGGCGCTGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: TRKAEPQRERNSRQASKPPAVHC*DSGAEP Trigger: GGGCTCAGCGCCGCTGTCGCAGCAGTGGACCGCGGG...TGGCTTACTGGCTTGTCTTGAGTTCCTTTCTCTCTGAGGTTCGGCCTTTCGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR GCA 90 bp | CGGTCCGGGGCTTTTCTGTACGTCTCGGATGATTCGATAGATCTGTGGGCTTTGAGGTTGGTGAGCGTCTaGAGCCGCGGGGTCTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: RSGAFLYVSDDSIDLWALRLVSV*SRGVLA Trigger: CGCCAAGACCCCGCGGCTGCAGACGCTCACCAACCT...CAAAGCCCACAGATCTATCGAATCATCCGAGACGTACAGAAAAGCCCCGGACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR GCA 90 bp | ACACGAAAGGCCGAACCTCAGAGAGAAAGGAACTCAAGACAAGCCAGTAAGCCAGGCGCTGGAAAGCCTTaGGGAAGTCGGGGCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TRKAEPQRERNSRQASKPGAGKP*GSRGCG Trigger: GCCGCAGCCCCGACTTCCGCAAGGCTTTCCAGCGCC...TGGCTTACTGGCTTGTCTTGAGTTCCTTTCTCTCTGAGGTTCGGCCTTTCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | ACACGAAAGGCCGAACCTCAGAGAGAAAGGAACTCAAGACAAGCCAGTAAGCCAGGCCCCACACCACGATaGTGGCCCCGAAAGGCACCA | + |
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Preference number: 4 (lower is better) Translates to: TRKAEPQRERNSRQASKPGPTPR*WPRKAP Trigger: TGGTGCCTTTCGGGGCCACCATCGTGGTGTGGGGCC...TGGCTTACTGGCTTGTCTTGAGTTCCTTTCTCTCTGAGGTTCGGCCTTTCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | CGGTCCGGGGCTTTTCTGTACGTCTCGGATGATTCGATAGATCTGTGGGCTTTGGGCACCAGGTCGCGGTaGAAAGCCTTCACCACGTTG | + |
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Preference number: 4 (lower is better) Translates to: RSGAFLYVSDDSIDLWALGTRSR*KAFTTL Trigger: CAACGTGGTGAAGGCTTTCCACCGCGACCTGGTGCC...CAAAGCCCACAGATCTATCGAATCATCCGAGACGTACAGAAAAGCCCCGGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | CGGTCCGGGGCTTTTCTGTACGTCTCGGATGATTCGATAGATCTGTGGGCTTTGCAGCAGAGCAGGCGCTaGAAAGCCTTGCGGAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: RSGAFLYVSDDSIDLWALQQSRR*KALRKS Trigger: CGACTTCCGCAAGGCTTTCCAGCGCCTGCTCTGCTG...CAAAGCCCACAGATCTATCGAATCATCCGAGACGTACAGAAAAGCCCCGGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | CATCCTTCTTTTCCCTTTGCTTTAAGAACAGGAGACACCAGTACTCCGGAATTAACGGCCGCCGCTTGCTaGAGCGCCCGTTGGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: HPSFPFALRTGDTSTPELTAAAC*SARWPA Trigger: CGCTGGCCAACGGGCGCTCCAGCAAGCGGCGGCCGT...TAATTCCGGAGTACTGGTGTCTCCTGTTCTTAAAGCAAAGGGAAAAGAAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR GCA 90 bp | ATACTAAGCCACACTCTCCCAACTCCTCCTAAACTTTCCTTTTTGCGCAAACGCTCGGCCCGCCACCAGTaGATGAGGATGGGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ILSHTLPTPPKLSFLRKRSARHQ*MRMGRK Trigger: CTTCCTGCCCATCCTCATGCACTGGTGGCGGGCCGA...GCGTTTGCGCAAAAAGGAAAGTTTAGGAGGAGTTGGGAGAGTGTGGCTTAGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR GCA 90 bp | AAGTCTTTCTATCTTGCTGTGCAATATGCACAGAGTGAGGTAGAGGACCCACAGGTCTTGAGCGCCTTCTaGTCGCGCAGAGCCACGAGG | + |
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Preference number: 4 (lower is better) Translates to: KSFYLAVQYAQSEVEDPQVLSAF*SRRATR Trigger: CCTCGTGGCTCTGCGCGAGCAGAAGGCGCTCAAGAC...CTGTGGGTCCTCTACCTCACTCTGTGCATATTGCACAGCAAGATAGAAAGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | ACACGAAAGGCCGAACCTCAGAGAGAAAGGAACTCAAGACAAGCCAGTAAGCCACGAAATCGCAGCACTTaGGGTCGTTGTAGCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: TRKAEPQRERNSRQASKPRNRST*GRCSSG Trigger: GCCGCTGCTACAACGACCCCAAGTGCTGCGATTTCG...TGGCTTACTGGCTTGTCTTGAGTTCCTTTCTCTCTGAGGTTCGGCCTTTCGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | CATCCTTCTTTTCCCTTTGCTTTAAGAACAGGAGACACCAGTACTCCGGAATTAGCAGCCGCGGGGTCTTaGCGATGGCCACGATCACCA | + |
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Preference number: 4 (lower is better) Translates to: HPSFPFALRTGDTSTPELAAAGS*RWPRSP Trigger: TGGTGATCGTGGCCATCGCCAAGACCCCGCGGCTGC...TAATTCCGGAGTACTGGTGTCTCCTGTTCTTAAAGCAAAGGGAAAAGAAGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR TCA 90 bp | TCGCATCCTTCTTTTCCCTTTGCTTTAAGAACAGGAGACACCAGTACTCCGGAACGTAGGCCCTGTTGGTaGCGAAATCGCAGCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: SHPSFPFALRTGDTSTPERRPCW*RNRSTW Trigger: CCAAGTGCTGCGATTTCGTCACCAACAGGGCCTACG...TTCCGGAGTACTGGTGTCTCCTGTTCTTAAAGCAAAGGGAAAAGAAGGATGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR TCA 90 bp | CAACTGTTTCCTTTTTGTTCTGTCCTATCTTTAGTTGACAGAGTCACATGTCACAGCGAAAGGGCGACGTaGTGGCGAGGTAGCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QLFPFCSVLSLVDRVTCHSERAT*WRGSGP Trigger: TGGACCGCTACCTCGCCATCACGTCGCCCTTTCGCT...GTGACATGTGACTCTGTCAACTAAAGATAGGACAGAACAAAAAGGAAACAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CCA 90 bp | CAACTGTTTCCTTTTTGTTCTGTCCTATCTTTAGTTGACAGAGTCACATGTCACGCGGGGTCTTGGCGATaGCCACGATCACCAGCACGT | + |
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Preference number: 4 (lower is better) Translates to: QLFPFCSVLSLVDRVTCHAGSWR*PRSPAR Trigger: ACGTGCTGGTGATCGTGGCCATCGCCAAGACCCCGC...GTGACATGTGACTCTGTCAACTAAAGATAGGACAGAACAAAAAGGAAACAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR TCA 90 bp | CCTTTTTGTTCTGTCCTATCTTTAGTTGACAGAGTCACATGTCACAGAGAGAGAGGTACACGAAGGCCATaGTGCACAGGGGCACGTAGA | + |
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Preference number: 4 (lower is better) Translates to: PFCSVLSLVDRVTCHRERGTRRP*CTGARR Trigger: TCTACGTGCCCCTGTGCATCATGGCCTTCGTGTACC...TCTCTCTCTGTGACATGTGACTCTGTCAACTAAAGATAGGACAGAACAAAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR TCA 90 bp | TTTGCCGTCTTTGTTTTTAGCCACATGTGCAATAATCTCAACTGTTTCCTTTTTCGTAGCCCAGCCAGTTaGAGAAGACGAAGAGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: FAVFVFSHMCNNLNCFLFRSPAS*RRRRGD Trigger: ATCGCCTCTTCGTCTTCTTCAACTGGCTGGGCTACG...AAAAAGGAAACAGTTGAGATTATTGCACATGTGGCTAAAAACAAAGACGGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| 3UTR CAA 72 bp | GAACCGTGCTCCACACATAGTTTCTCGAAACCAGATTaGTCTGTTTCGCATCCTTCTTTTCCCTTTGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: EPCSTHSFSKPD*SVSHPSFPFAL Trigger: TAAAGCAAAGGGAAAAGAAGGATGCGAAACAGACAAATCTGGTTTCGAGAAACTATGTGTGGAGCACGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CCA 90 bp | GCAGCGAGGCGGGAGGCGACGCGAGCACCAGCAGCCGCGCCGCGGTaGCCGCACCGTCGGGCAGCGGCGCGGCGGACGACAGGTTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: AARREATRAPAAAPR*PHRRAAARRTTGCR Trigger: CCTGCAACCTGTCGTCCGCCGCGCCGCTGCCCGACGGTGCGGCCACCGCGGCGCGGCTGCTGGTGCTCGCGTCGCCTCCCGCCTCGCTGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS GCA 90 bp | GCGCCTTCTGCTCGCGCAGAGCCACGAGGCGCGACGGCCGCCGCTTaGTGGAGCGCCCGTTGGCCAGCGAGTCTGCGGGGCGCGGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: APSARAEPRGATAAA*WSARWPASLRGAVA Trigger: GGCCACCGCGCCCCGCAGACTCGCTGGCCAACGGGCGCTCCAGCAAGCGGCGGCCGTCGCGCCTCGTGGCTCTGCGCGAGCAGAAGGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CCA 90 bp | GCAGAGCCACGAGGCGCGACGGCCGCCGCTTGCTGGAGCGCCCGTTaGCCAGCGAGTCTGCGGGGCGCGGTGGCCCAGGTGACGGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: AEPRGATAAACWSAR*PASLRGAVAQVTAR Trigger: CCTCGCCGTCACCTGGGCCACCGCGCCCCGCAGACTCGCTGGCCAACGGGCGCTCCAGCAAGCGGCGGCCGTCGCGCCTCGTGGCTCTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CCA 90 bp | CCTTCTGCTCGCGCAGAGCCACGAGGCGCGACGGCCGCCGCTTGCTaGAGCGCCCGTTGGCCAGCGAGTCTGCGGGGCGCGGTGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PSARAEPRGATAAAC*SARWPASLRGAVAQ Trigger: CTGGGCCACCGCGCCCCGCAGACTCGCTGGCCAACGGGCGCTCCAGCAAGCGGCGGCCGTCGCGCCTCGTGGCTCTGCGCGAGCAGAAGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CCA 90 bp | AGCCCTGGCGCCCCGGCTCGTCCAGGCTCGAATCGCTGTCCACAGTaGTTGTCCCGCCGTTGCAGCCGGTCCAGGGCTCCAGCAGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: SPGAPARPGSNRCPQ*LSRRCSRSRAPAGA Trigger: CGCGCCTGCTGGAGCCCTGGACCGGCTGCAACGGCGGGACAACCACTGTGGACAGCGATTCGAGCCTGGACGAGCCGGGGCGCCAGGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS GCA 90 bp | GCTCGTCCAGGCTCGAATCGCTGTCCACAGTGGTTGTCCCGCCGTTaGAGCCGGTCCAGGGCTCCAGCAGGCGCGCCGGTGGGGTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: ARPGSNRCPQWLSRR*SRSRAPAGAPVGWS Trigger: GGACCACCCCACCGGCGCGCCTGCTGGAGCCCTGGACCGGCTGCAACGGCGGGACAACCACTGTGGACAGCGATTCGAGCCTGGACGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CAA 90 bp | GCGGGCTCTCTTCCTCTAGGGATGCAGAGCCCGTGTCCAGCCCGGGACTATGGGGCGGCGGACGACAGGTaGCAGGGTTCGGAGGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: AGSLPLGMQSPCPARDYGAADDR*QGSEAP Trigger: GGGCGCCTCCGAACCCTGCAACCTGTCGTCCGCCGC...CCCATAGTCCCGGGCTGGACACGGGCTCTGCATCCCTAGAGGAAGAGAGCCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS GCA 90 bp | AGAACGATGAGCGCCAGCAGTAGGCCCATACCCGCGGTCCACTGCTaGGACAGCGGCGCTGAGCCCTCGCTGGCTGGAGGCAGCAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: RTMSASSRPIPAVHC*DSGAEPSLAGGSSE Trigger: CTCGCTGCTGCCTCCAGCCAGCGAGGGCTCAGCGCCGCTGTCGCAGCAGTGGACCGCGGGTATGGGCCTACTGCTGGCGCTCATCGTTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS GCA 90 bp | AGCAGAACGATGAGCGCCAGCAGTAGGCCCATACCCGCGGTCCACTaGTGCGACAGCGGCGCTGAGCCCTCGCTGGCTGGAGGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SRTMSASSRPIPAVH*CDSGAEPSLAGGSS Trigger: GCTGCTGCCTCCAGCCAGCGAGGGCTCAGCGCCGCTGTCGCAGCAGTGGACCGCGGGTATGGGCCTACTGCTGGCGCTCATCGTTCTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS TCA 90 bp | TGTAGCAGCGGCGCGCTTCGTCGCTCTCGGCCCGCCACCAGTGCATaGGGATGGGCAGGAAGGACACCAACGCCGAGATGGCCCACACTG | + |
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Preference number: 5 (lower is better) Translates to: CSSGALRRSRPATSA*GWAGRTPTPRWPTL Trigger: CAGTGTGGGCCATCTCGGCGTTGGTGTCCTTCCTGCCCATCCTCATGCACTGGTGGCGGGCCGAGAGCGACGAAGCGCGCCGCTGCTACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS GCA 90 bp | AGCGTGAACACACCCATGATGATGCCCAGTGTCTTGAGCGCCTTCTaGTCGCGCAGAGCCACGAGGCGCGACGGCCGCCGCTTGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SVNTPMMMPSVLSAF*SRRATRRDGRRLLE Trigger: CTCCAGCAAGCGGCGGCCGTCGCGCCTCGTGGCTCTGCGCGAGCAGAAGGCGCTCAAGACACTGGGCATCATCATGGGTGTGTTCACGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CAA 90 bp | GCGGGCTCTCTTCCTCTAGGGATGCAGAGCCCGTGTCCAGCCCGGGACTATGGGAAAGCCTTCACCACGTaGGCCAGGAAGAAGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: AGSLPLGMQSPCPARDYGKAFTT*ARKKGS Trigger: GCTGCCCTTCTTCCTGGCCAACGTGGTGAAGGCTTT...CCCATAGTCCCGGGCTGGACACGGGCTCTGCATCCCTAGAGGAAGAGAGCCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS TCA 90 bp | CGTAGAAGGAGACGACGGACGAGGCGATGGCGTAGGCCCTGTTGGTaGCGAAATCGCAGCACTTGGGGTCGTTGTAGCAGCGGCGCGCTT | + |
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Preference number: 5 (lower is better) Translates to: RRRRRRTRRWRRPCW*RNRSTWGRCSSGAL Trigger: AAGCGCGCCGCTGCTACAACGACCCCAAGTGCTGCGATTTCGTCACCAACAGGGCCTACGCCATCGCCTCGTCCGTCGTCTCCTTCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CCA 90 bp | CCGAGGAAGCGGCGCTCGCAGCTGTCGATCTTCTTTACCTGTTTTTaGGCCTCGCGGAACACCCGCAGGTACACGAAGGCCATGATGCAC | + |
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Preference number: 5 (lower is better) Translates to: PRKRRSQLSIFFTCF*ASRNTRRYTKAMMH Trigger: GTGCATCATGGCCTTCGTGTACCTGCGGGTGTTCCGCGAGGCCCAAAAACAGGTAAAGAAGATCGACAGCTGCGAGCGCCGCTTCCTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CAA 90 bp | CGGTCCGGGGCTTTTCTGTACGTCTCGGATGATTCGATAGATCTGTGGGCTTTGAGGCGCTGGAAAGCCTaGCGGAAGTCGGGGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: RSGAFLYVSDDSIDLWALRRWKA*RKSGLR Trigger: CCGCAGCCCCGACTTCCGCAAGGCTTTCCAGCGCCT...CAAAGCCCACAGATCTATCGAATCATCCGAGACGTACAGAAAAGCCCCGGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CAA 90 bp | ACACGAAAGGCCGAACCTCAGAGAGAAAGGAACTCAAGACAAGCCAGTAAGCCAATGATGCCCAGTGTCTaGAGCGCCTTCTGCTCGCGC | + |
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Preference number: 5 (lower is better) Translates to: TRKAEPQRERNSRQASKPMMPSV*SAFCSR Trigger: GCGCGAGCAGAAGGCGCTCAAGACACTGGGCATCAT...TGGCTTACTGGCTTGTCTTGAGTTCCTTTCTCTCTGAGGTTCGGCCTTTCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CAA 90 bp | ATACTAAGCCACACTCTCCCAACTCCTCCTAAACTTTCCTTTTTGCGCAAACGCGACATGATGAAGAGGTaGGTGAGCGTCTGCAGCCGC | + |
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Preference number: 5 (lower is better) Translates to: ILSHTLPTPPKLSFLRKRDMMKR*VSVCSR Trigger: GCGGCTGCAGACGCTCACCAACCTCTTCATCATGTC...GCGTTTGCGCAAAAAGGAAAGTTTAGGAGGAGTTGGGAGAGTGTGGCTTAGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS-3UTR CAA 90 bp | ATACTAAGCCACACTCTCCCAACTCCTCCTAAACTTTCCTTTTTGCGCAAACGCCTTCTTTACCTGTTTTaGGGCCTCGCGGAACACCCG | + |
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Preference number: 5 (lower is better) Translates to: ILSHTLPTPPKLSFLRKRLLYLF*GLAEHP Trigger: CGGGTGTTCCGCGAGGCCCAAAAACAGGTAAAGAAG...GCGTTTGCGCAAAAAGGAAAGTTTAGGAGGAGTTGGGAGAGTGTGGCTTAGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS TCA 72 bp | GTTGGCCAGCGAGTCTGCGGGGCGCGGTGGCCCAGGTaGCGGCGAGGGCTCAGGCGAGGGCGGCCGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VGQRVCGARWPR*RRGLRRGRPGW Trigger: CCAGCCCGGCCGCCCTCGCCTGAGCCCTCGCCGTCACCTGGGCCACCGCGCCCCGCAGACTCGCTGGCCAAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CCA 72 bp | CGCGCAGAGCCACGAGGCGCGACGGCCGCCGCTTGCTaGAGCGCCCGTTGGCCAGCGAGTCTGCGGGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: RAEPRGATAAAC*SARWPASLRGA Trigger: CGCGCCCCGCAGACTCGCTGGCCAACGGGCGCTCCAGCAAGCGGCGGCCGTCGCGCCTCGTGGCTCTGCGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CAA 90 bp | CGCAGAGCCACGAGGCGCGACGGCCGCCGCTTGCTGGAGCGCCCGTaGGCCAGCGAGTCTGCGGGGCGCGGTGGCCCAGGTGACGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: RRATRRDGRRLLERP*ASESAGRGGPGDGE Trigger: CTCGCCGTCACCTGGGCCACCGCGCCCCGCAGACTCGCTGGCCAACGGGCGCTCCAGCAAGCGGCGGCCGTCGCGCCTCGTGGCTCTGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CCA 72 bp | AGCCGGTCCAGGGCTCCAGCAGGCGCGCCGGTGGGGTaGTCCCGGCGTCGTCGTCGTCGTCGTCCGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SRSRAPAGAPVG*SRRRRRRRPRE Trigger: CTCCCTCGGACGACGACGACGACGACGCCGGGACCACCCCACCGGCGCGCCTGCTGGAGCCCTGGACCGGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CAA 90 bp | CCTGGCGCCCCGGCTCGTCCAGGCTCGAATCGCTGTCCACAGTGGTaGTCCCGCCGTTGCAGCCGGTCCAGGGCTCCAGCAGGCGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: PGAPARPGSNRCPQW*SRRCSRSRAPAGAP Trigger: CGGCGCGCCTGCTGGAGCCCTGGACCGGCTGCAACGGCGGGACAACCACTGTGGACAGCGATTCGAGCCTGGACGAGCCGGGGCGCCAGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS GCA 72 bp | GCAGGAAGGACACCAACGCCGAGATGGCCCACACTGTaGACACGAGGGCCCGCGCTCGCGCGCGCGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: AGRTPTPRWPTL*TRGPALARASA Trigger: TGCTGACGCGCGCGCGAGCGCGGGCCCTCGTGTGCACAGTGTGGGCCATCTCGGCGTTGGTGTCCTTCCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS GCA 72 bp | GGCTCGAATCGCTGTCCACAGTGGTTGTCCCGCCGTTaGAGCCGGTCCAGGGCTCCAGCAGGCGCGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GSNRCPQWLSRR*SRSRAPAGAPV Trigger: CACCGGCGCGCCTGCTGGAGCCCTGGACCGGCTGCAACGGCGGGACAACCACTGTGGACAGCGATTCGAGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CCA 72 bp | GCCCCGGCTCGTCCAGGCTCGAATCGCTGTCCACAGTaGTTGTCCCGCCGTTGCAGCCGGTCCAGGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: APARPGSNRCPQ*LSRRCSRSRAP Trigger: TGGAGCCCTGGACCGGCTGCAACGGCGGGACAACCACTGTGGACAGCGATTCGAGCCTGGACGAGCCGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS TCA 72 bp | GGCGCGCTTCGTCGCTCTCGGCCCGCCACCAGTGCATaGGGATGGGCAGGAAGGACACCAACGCCGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: GALRRSRPATSA*GWAGRTPTPRW Trigger: CCATCTCGGCGTTGGTGTCCTTCCTGCCCATCCTCATGCACTGGTGGCGGGCCGAGAGCGACGAAGCGCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS GCA 72 bp | ACACCCATGATGATGCCCAGTGTCTTGAGCGCCTTCTaGTCGCGCAGAGCCACGAGGCGCGACGGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: TPMMMPSVLSAF*SRRATRRDGRR Trigger: GCGGCGGCCGTCGCGCCTCGTGGCTCTGCGCGAGCAGAAGGCGCTCAAGACACTGGGCATCATCATGGGTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CAA 72 bp | CCGGCTCGTCCAGGCTCGAATCGCTGTCCACAGTGGTaGTCCCGCCGTTGCAGCCGGTCCAGGGCTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PARPGSNRCPQW*SRRCSRSRAPA Trigger: TGCTGGAGCCCTGGACCGGCTGCAACGGCGGGACAACCACTGTGGACAGCGATTCGAGCCTGGACGAGCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS TCA 72 bp | AGACGACGGACGAGGCGATGGCGTAGGCCCTGTTGGTaGCGAAATCGCAGCACTTGGGGTCGTTGTAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RRRTRRWRRPCW*RNRSTWGRCSS Trigger: GCTGCTACAACGACCCCAAGTGCTGCGATTTCGTCACCAACAGGGCCTACGCCATCGCCTCGTCCGTCGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CCA 72 bp | CGGCGCTCGCAGCTGTCGATCTTCTTTACCTGTTTTTaGGCCTCGCGGAACACCCGCAGGTACACGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RRSQLSIFFTCF*ASRNTRRYTKA Trigger: GGCCTTCGTGTACCTGCGGGTGTTCCGCGAGGCCCAAAAACAGGTAAAGAAGATCGACAGCTGCGAGCGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CCA 72 bp | AAGAAGACGAAGAGGCGATCCGGCACCAGGTCGCGGTaGAAAGCCTTCACCACGTTGGCCAGGAAGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: KKTKRRSGTRSR*KAFTTLARKKG Trigger: GCCCTTCTTCCTGGCCAACGTGGTGAAGGCTTTCCACCGCGACCTGGTGCCGGATCGCCTCTTCGTCTTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CAA 72 bp | GCGGCGCTCGCAGCTGTCGATCTTCTTTACCTGTTTTaGGGCCTCGCGGAACACCCGCAGGTACACGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: AALAAVDLLYLF*GLAEHPQVHEG Trigger: GCCTTCGTGTACCTGCGGGTGTTCCGCGAGGCCCAAAAACAGGTAAAGAAGATCGACAGCTGCGAGCGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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| CDS CAA 90 bp | GCCGAGGAAGCGGCGCTCGCAGCTGTCGATCTTCTTTACCTGTTTTaGGGCCTCGCGGAACACCCGCAGGTACACGAAGGCCATGATGCA | + |
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Preference number: 6 (lower is better) Translates to: AEEAALAAVDLLYLF*GLAEHPQVHEGHDA Trigger: TGCATCATGGCCTTCGTGTACCTGCGGGTGTTCCGCGAGGCCCAAAAACAGGTAAAGAAGATCGACAGCTGCGAGCGCCGCTTCCTCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038949.6 |
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