Pregenerated sensors for ADRA2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045318Ensembl transcript IDs: ENSMUST00000049545.7
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TTGTCTCTCGCCCAGCTCCTGTCTGCCACATCCCACACTGTGCCCTaGAGTCCACCCTGGGACTCTGGAGAGACCACACTGTTGGTCTCT | + |
Preference number: 1 (lower is better) Translates to: LSLAQLLSATSHTVP*SPPWDSGETTLLVS Trigger: AGAGACCAACAGTGTGGTCTCTCCAGAGTCCCAGGGTGGACTTCAGGGCACAGTGTGGGATGTGGCAGACAGGAGCTGGGCGAGAGACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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3UTR-3UTR TCA 90 bp | CCCAGACAGATGCCTTTTTCAGGTCATAGGAAGTCAGCCCTTGCTCACAGGGAATCCCACACTGTGCCCTaGAGTCCACCCTGGGACTCT | + |
Preference number: 2 (lower is better) Translates to: PRQMPFSGHRKSALAHRESHTVP*SPPWDS Trigger: AGAGTCCCAGGGTGGACTTCAGGGCACAGTGTGGGA...TTCCCTGTGAGCAAGGGCTGACTTCCTATGACCTGAAAAAGGCATCTGTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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3UTR-3UTR CCA 90 bp | CAACCTAGCTACAGCCCCTCGCTGAGATGGGAAGGCAAAGGTCTCCCTTTCTCCGAGAGACCACACTGTTaGTCTCTCTGTCTACCCGAG | + |
Preference number: 2 (lower is better) Translates to: QPSYSPSLRWEGKGLPFSERPHC*SLCLPE Trigger: CTCGGGTAGACAGAGAGACCAACAGTGTGGTCTCTC...GGAGAAAGGGAGACCTTTGCCTTCCCATCTCAGCGAGGGGCTGTAGCTAGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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3UTR-3UTR CCA 90 bp | AGCTCTAAAGCCCTAAGTTCACAGCCACACTCCACAGAAGCCTTCTCAGGAACTAGCCCCTCGCTGAGATaGGAAGGCAAAGGTCTCCCT | + |
Preference number: 2 (lower is better) Translates to: SSKALSSQPHSTEAFSGTSPSLR*EGKGLP Trigger: AGGGAGACCTTTGCCTTCCCATCTCAGCGAGGGGCT...AGTTCCTGAGAAGGCTTCTGTGGAGTGTGGCTGTGAACTTAGGGCTTTAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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3UTR TCA 72 bp | AGGAACTGGATCCACAACCTAGCTACAGCCCCTCGCTaGGATGGGAAGGCAAAGGTCTCCCTTTCTCCTCCC | + |
Preference number: 3 (lower is better) Translates to: RNWIHNLATAPR*DGKAKVSLSPP Trigger: GGGAGGAGAAAGGGAGACCTTTGCCTTCCCATCTCAGCGAGGGGCTGTAGCTAGGTTGTGGATCCAGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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3UTR-3UTR CAA 90 bp | CTCTCCTCCCCCAGACAGATGCCTTTTTCAGGTCATAGGAAGTCAGCCCTTGCTGGAGAGACCACACTGTaGGTCTCTCTGTCTACCCGA | + |
Preference number: 3 (lower is better) Translates to: LSSPRQMPFSGHRKSALAGETTL*VSLSTR Trigger: TCGGGTAGACAGAGAGACCAACAGTGTGGTCTCTCC...AGCAAGGGCTGACTTCCTATGACCTGAAAAAGGCATCTGTCTGGGGGAGGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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3UTR-3UTR CAA 90 bp | CTCTCCTCCCCCAGACAGATGCCTTTTTCAGGTCATAGGAAGTCAGCCCTTGCTTGGTGTGCTCCTTTCTaGGTGTGGTTTAGTTGTCTG | + |
Preference number: 3 (lower is better) Translates to: LSSPRQMPFSGHRKSALAWCAPF*VWFSCL Trigger: CAGACAACTAAACCACACCAAGAAAGGAGCACACCA...AGCAAGGGCTGACTTCCTATGACCTGAAAAAGGCATCTGTCTGGGGGAGGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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3UTR CCA 72 bp | AGACCGAGAAGGGGGTGGTGTGCTCCTTTCTTGGTGTaGTTTAGTTGTCTGAGCTCTAAAGCCCTAAGTTCA | + |
Preference number: 3 (lower is better) Translates to: RPRRGWCAPFLV*FSCLSSKALSS Trigger: TGAACTTAGGGCTTTAGAGCTCAGACAACTAAACCACACCAAGAAAGGAGCACACCACCCCCTTCTCGGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR TCA 90 bp | GGCCCAGTTGTCTCTCGCCCAGCTCCTGTCTGCCACATCCCACACTGTGCCCTGGGCCGCGTTTCTCGCTaGGCGTACGCGTGCGCAGCT | + |
Preference number: 4 (lower is better) Translates to: GPVVSRPAPVCHIPHCALGRVSR*AYACAA Trigger: AGCTGCGCACGCGTACGCTCAGCGAGAAACGCGGCC...CAGGGCACAGTGTGGGATGTGGCAGACAGGAGCTGGGCGAGAGACAACTGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR GCA 90 bp | CCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCAGGTCCAGGAGGCCAGAGGCTGCGGGGCGCGCAGTaGTCGGCTGGTCAACACAGC | + |
Preference number: 4 (lower is better) Translates to: PSSELSRTSVGPGPGGQRLRGAQ*SAGQHS Trigger: GCTGTGTTGACCAGCCGAGCACTGCGCGCCCCGCAG...CCTCTGGCCTCCTGGACCTGGACCCACTGACGTCCTGGACAGCTCTGAACTCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR GCA 90 bp | CCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCAGGTCCAGGAGGCCAGAGGGAAGCGCTTCTCGCGTaGCTGGGCCACCTTGCGGCG | + |
Preference number: 4 (lower is better) Translates to: PSSELSRTSVGPGPGGQREALLA*LGHLAA Trigger: CGCCGCAAGGTGGCCCAGGCACGCGAGAAGCGCTTC...CCTCTGGCCTCCTGGACCTGGACCCACTGACGTCCTGGACAGCTCTGAACTCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR CCA 90 bp | CCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCAGGTCCAGGAGGCCAGAGGTACGCGTGCGCAGCTTaGCCACGCGGTAGATGCGCG | + |
Preference number: 4 (lower is better) Translates to: PSSELSRTSVGPGPGGQRYACAA*PRGRCA Trigger: CGCGCATCTACCGCGTGGCCAAGCTGCGCACGCGTA...CCTCTGGCCTCCTGGACCTGGACCCACTGACGTCCTGGACAGCTCTGAACTCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR GCA 90 bp | CCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCAGGTCCAGGAGGCCAGAGGTCTCCCCCGCTGCCTTaGCCAGCCCATTCTCTGTGG | + |
Preference number: 4 (lower is better) Translates to: PSSELSRTSVGPGPGGQRSPPLP*PAHSLW Trigger: CCACAGAGAATGGGCTGGGCAAGGCAGCGGGGGAGA...CCTCTGGCCTCCTGGACCTGGACCCACTGACGTCCTGGACAGCTCTGAACTCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR GCA 90 bp | CTGTTGGTCTCTCTGTCTACCCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCCGGCTCCACTTCAGTaGGCGGGGGCGCGCAATGCC | + |
Preference number: 4 (lower is better) Translates to: LLVSLSTRVQSCPGRQWVPAPLQ*AGARNA Trigger: GGCATTGCGCGCCCCCGCGCACTGAAGTGGAGCCGG...GACCCACTGACGTCCTGGACAGCTCTGAACTCGGGTAGACAGAGAGACCAACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR CCA 90 bp | TGTTGGTCTCTCTGTCTACCCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCCGCTTCTCGCGTGCCTaGGCCACCTTGCGGCGGCAC | + |
Preference number: 4 (lower is better) Translates to: CWSLCLPEFRAVQDVSGSRFSRA*ATLRRH Trigger: GTGCCGCCGCAAGGTGGCCCAGGCACGCGAGAAGCG...GGACCCACTGACGTCCTGGACAGCTCTGAACTCGGGTAGACAGAGAGACCAACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR CCA 90 bp | CAGAAGCCTTCTCAGGAACTGGATCCACAACCTAGCTACAGCCCCTCGCTGAGAGCACCTGCGGAGTACTaGCCCGGCGGTGGCACCCAG | + |
Preference number: 4 (lower is better) Translates to: QKPSQELDPQPSYSPSLRAPAEY*PGGGTQ Trigger: CTGGGTGCCACCGCCGGGCCAGTACTCCGCAGGTGC...TCTCAGCGAGGGGCTGTAGCTAGGTTGTGGATCCAGTTCCTGAGAAGGCTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR GCA 90 bp | CAGAAGCCTTCTCAGGAACTGGATCCACAACCTAGCTACAGCCCCTCGCTGAGAGTGCCTGGGCCACCTTaGGGCGGCACACACTGCTGC | + |
Preference number: 4 (lower is better) Translates to: QKPSQELDPQPSYSPSLRVPGPP*GGTHCC Trigger: GCAGCAGTGTGTGCCGCCGCAAGGTGGCCCAGGCAC...TCTCAGCGAGGGGCTGTAGCTAGGTTGTGGATCCAGTTCCTGAGAAGGCTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR GCA 90 bp | TGTTGGTCTCTCTGTCTACCCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCGAAACCCACCACAGCTaGCAACCCCGCCACAGCACC | + |
Preference number: 4 (lower is better) Translates to: CWSLCLPEFRAVQDVSGSETHHS*QPRHST Trigger: GGTGCTGTGGCGGGGTTGGCAGCTGTGGTGGGTTTC...GGACCCACTGACGTCCTGGACAGCTCTGAACTCGGGTAGACAGAGAGACCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR GCA 90 bp | TGTTGGTCTCTCTGTCTACCCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCTGGCCACGCGGTAGATaGGCGCATAGACCAGGCCCA | + |
Preference number: 4 (lower is better) Translates to: CWSLCLPEFRAVQDVSGSWPRGR*AHRPGP Trigger: TGGGCCTGGTCTATGCGCGCATCTACCGCGTGGCCA...GGACCCACTGACGTCCTGGACAGCTCTGAACTCGGGTAGACAGAGAGACCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR GCA 90 bp | CAGGAACTGGATCCACAACCTAGCTACAGCCCCTCGCTGAGATGGGAAGGCAAACCCGTTCTCCCCCGCTaGCTTGCCCAGCCCATTCTC | + |
Preference number: 4 (lower is better) Translates to: QELDPQPSYSPSLRWEGKPVLPR*LAQPIL Trigger: GAGAATGGGCTGGGCAAGGCAGCGGGGGAGAACGGG...TTTGCCTTCCCATCTCAGCGAGGGGCTGTAGCTAGGTTGTGGATCCAGTTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR TCA 90 bp | TGTTGGTCTCTCTGTCTACCCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCGTACGAACACGCCCATaGCCACCGCCAACACGAAGG | + |
Preference number: 4 (lower is better) Translates to: CWSLCLPEFRAVQDVSGSVRTRP*PPPTRR Trigger: CCTTCGTGTTGGCGGTGGTCATGGGCGTGTTCGTAC...GGACCCACTGACGTCCTGGACAGCTCTGAACTCGGGTAGACAGAGAGACCAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR CCA 90 bp | ATGCCTTTTTCAGGTCATAGGAAGTCAGCCCTTGCTCACAGGGAAGACCGAGAACCAGCCCATTCTCTGTaGTCGGGGACGCGCCGTCGG | + |
Preference number: 4 (lower is better) Translates to: MPFSGHRKSALAHREDREPAHSL*SGTRRR Trigger: CCGACGGCGCGTCCCCGACCACAGAGAATGGGCTGG...TTCTCGGTCTTCCCTGTGAGCAAGGGCTGACTTCCTATGACCTGAAAAAGGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR TCA 90 bp | CTCTCCTCCCCCAGACAGATGCCTTTTTCAGGTCATAGGAAGTCAGCCCTTGCTACCAGGTCTCATCGTTaGGGCCGCACTGCGGATAGG | + |
Preference number: 4 (lower is better) Translates to: LSSPRQMPFSGHRKSALATRSHR*GRTADR Trigger: CCTATCCGCAGTGCGGCCTCAACGATGAGACCTGGT...AGCAAGGGCTGACTTCCTATGACCTGAAAAAGGCATCTGTCTGGGGGAGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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3UTR CAA 72 bp | GACAGATGCCTTTTTCAGGTCATAGGAAGTCAGCCCTaGCTCACAGGGAAGACCGAGAAGGGGGTGGTGTGC | + |
Preference number: 4 (lower is better) Translates to: DRCLFQVIGSQP*LTGKTEKGVVC Trigger: GCACACCACCCCCTTCTCGGTCTTCCCTGTGAGCAAGGGCTGACTTCCTATGACCTGAAAAAGGCATCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR GCA 90 bp | CAACCTAGCTACAGCCCCTCGCTGAGATGGGAAGGCAAAGGTCTCCCTTTCTCCCGAAGAAGGAGCCTATaGAGGAGGACAAGATGTACC | + |
Preference number: 4 (lower is better) Translates to: QPSYSPSLRWEGKGLPFSRRRSL*RRTRCT Trigger: GGTACATCTTGTCCTCCTGCATAGGCTCCTTCTTCG...GGAGAAAGGGAGACCTTTGCCTTCCCATCTCAGCGAGGGGCTGTAGCTAGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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3UTR CAA 72 bp | CAGGGAAGACCGAGAAGGGGGTGGTGTGCTCCTTTCTaGGTGTGGTTTAGTTGTCTGAGCTCTAAAGCCCTA | + |
Preference number: 4 (lower is better) Translates to: QGRPRRGWCAPF*VWFSCLSSKAL Trigger: TAGGGCTTTAGAGCTCAGACAACTAAACCACACCAAGAAAGGAGCACACCACCCCCTTCTCGGTCTTCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS CCA 90 bp | GCGCCCGGCGCCGACGCGACAGGAAGAACTCGACGGAGCGCGAGCTaGCCCGCGACAGGCGCCCTCCGGGGCCTGGGGACCGAGACGCCG | + |
Preference number: 5 (lower is better) Translates to: APGADATGRTRRSAS*PATGALRGLGTETP Trigger: CGGCGTCTCGGTCCCCAGGCCCCGGAGGGCGCCTGTCGCGGGCCAGCTCGCGCTCCGTCGAGTTCTTCCTGTCGCGTCGGCGCCGGGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS CCA 90 bp | CTCGACGGAGCGCGAGCTGGCCCGCGACAGGCGCCCTCCGGGGCCTaGGGACCGAGACGCCGTCCGAGCACCCTGCTCGGCTGCCAGTCC | + |
Preference number: 5 (lower is better) Translates to: LDGARAGPRQAPSGA*GPRRRPSTLLGCQS Trigger: GGACTGGCAGCCGAGCAGGGTGCTCGGACGGCGTCTCGGTCCCCAGGCCCCGGAGGGCGCCTGTCGCGGGCCAGCTCGCGCTCCGTCGAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 90 bp | CTCCTCTGCGCAGCGCGCCCCGGCGCCTCCGCCTCTCGGCCGCACTaGTCTCATCCGGCTCCACTTCAGTGCGCGGGGGCGCGCAATGCC | + |
Preference number: 5 (lower is better) Translates to: LLCAARPGASASRPH*SHPAPLQCAGARNA Trigger: GGCATTGCGCGCCCCCGCGCACTGAAGTGGAGCCGGATGAGAGCAGTGCGGCCGAGAGGCGGAGGCGCCGGGGCGCGCTGCGCAGAGGAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 90 bp | GAGCACCCTGCTCGGCTGCCAGTCCCGGTCCCGGTCCGTCCGCACTaGCCGTGTCCCCCTCAGCACCCTCTCGCCGCCGTCCTCCTCTGC | + |
Preference number: 5 (lower is better) Translates to: EHPARLPVPVPVRPH*PCPPQHPLAAVLLC Trigger: GCAGAGGAGGACGGCGGCGAGAGGGTGCTGAGGGGGACACGGGCAGTGCGGACGGACCGGGACCGGGACTGGCAGCCGAGCAGGGTGCTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 90 bp | AGCGCTTCTCGCGTGCCTGGGCCACCTTGCGGCGGCACACACTGCTaGGCGCCCGGCGCCGACGCGACAGGAAGAACTCGACGGAGCGCG | + |
Preference number: 5 (lower is better) Translates to: SASRVPGPPCGGTHC*APGADATGRTRRSA Trigger: CGCGCTCCGTCGAGTTCTTCCTGTCGCGTCGGCGCCGGGCGCGCAGCAGTGTGTGCCGCCGCAAGGTGGCCCAGGCACGCGAGAAGCGCT 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 90 bp | GCCTCCGCCTCTCGGCCGCACTGCTCTCATCCGGCTCCACTTCAGTaGGCGGGGGCGCGCAATGCCCGTTCTCCCCCGCTGCCTTGCCCA | + |
Preference number: 5 (lower is better) Translates to: ASASRPHCSHPAPLQ*AGARNARSPPLPCP Trigger: TGGGCAAGGCAGCGGGGGAGAACGGGCATTGCGCGCCCCCGCGCACTGAAGTGGAGCCGGATGAGAGCAGTGCGGCCGAGAGGCGGAGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS CCA 90 bp | AAACCCACCACAGCTGCCAACCCCGCCACAGCACCTGCGGAGTACTaGCCCGGCGGTGGCACCCAGTCGGTCCCCGAGGCGTTGGCACCC | + |
Preference number: 5 (lower is better) Translates to: KPTTAANPATAPAEY*PGGGTQSVPEALAP Trigger: GGGTGCCAACGCCTCGGGGACCGACTGGGTGCCACCGCCGGGCCAGTACTCCGCAGGTGCTGTGGCGGGGTTGGCAGCTGTGGTGGGTTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 90 bp | AACGATGAGGAAACCCACCACAGCTGCCAACCCCGCCACAGCACCTaGGGAGTACTGGCCCGGCGGTGGCACCCAGTCGGTCCCCGAGGC | + |
Preference number: 5 (lower is better) Translates to: NDEETHHSCQPRHST*GVLARRWHPVGPRG Trigger: GCCTCGGGGACCGACTGGGTGCCACCGCCGGGCCAGTACTCCGCAGGTGCTGTGGCGGGGTTGGCAGCTGTGGTGGGTTTCCTCATCGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 90 bp | GCACTGCTCTCATCCGGCTCCACTTCAGTGCGCGGGGGCGCGCAATaGCCGTTCTCCCCCGCTGCCTTGCCCAGCCCATTCTCTGTGGTC | + |
Preference number: 5 (lower is better) Translates to: ALLSSGSTSVRGGAQ*PFSPAALPSPFSVV Trigger: GACCACAGAGAATGGGCTGGGCAAGGCAGCGGGGGAGAACGGGCATTGCGCGCCCCCGCGCACTGAAGTGGAGCCGGATGAGAGCAGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR CAA 90 bp | TGTTGGTCTCTCTGTCTACCCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCTCGGTCCCCGAGGCGTaGGCACCCCCGCCGCTACCC | + |
Preference number: 5 (lower is better) Translates to: CWSLCLPEFRAVQDVSGSSVPEA*APPPLP Trigger: GGGTAGCGGCGGGGGTGCCAACGCCTCGGGGACCGA...GGACCCACTGACGTCCTGGACAGCTCTGAACTCGGGTAGACAGAGAGACCAACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 90 bp | CACATTGCCTACCACGGTGAAAACGATGAGGAAACCCACCACAGCTaGCAACCCCGCCACAGCACCTGCGGAGTACTGGCCCGGCGGTGG | + |
Preference number: 5 (lower is better) Translates to: HIAYHGENDEETHHS*QPRHSTCGVLARRW Trigger: CCACCGCCGGGCCAGTACTCCGCAGGTGCTGTGGCGGGGTTGGCAGCTGTGGTGGGTTTCCTCATCGTTTTCACCGTGGTAGGCAATGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR CAA 90 bp | CAACCTAGCTACAGCCCCTCGCTGAGATGGGAAGGCAAAGGTCTCCCTTTCTCCCGTGCCTGGGCCACCTaGCGGCGGCACACACTGCTG | + |
Preference number: 5 (lower is better) Translates to: QPSYSPSLRWEGKGLPFSRAWAT*RRHTLL Trigger: CAGCAGTGTGTGCCGCCGCAAGGTGGCCCAGGCACG...GGAGAAAGGGAGACCTTTGCCTTCCCATCTCAGCGAGGGGCTGTAGCTAGGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR CAA 90 bp | CTCTCTGTCTACCCGAGTTCAGAGCTGTCCAGGACGTCAGTGGGTCCAGGTCCAGTTGTACTCTACCGCTaGCGTCACCGACCAGTAGCG | + |
Preference number: 5 (lower is better) Translates to: LSVYPSSELSRTSVGPGPVVLYR*RHRPVA Trigger: CGCTACTGGTCGGTGACGCAAGCGGTAGAGTACAAC...TGGACCTGGACCCACTGACGTCCTGGACAGCTCTGAACTCGGGTAGACAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR CAA 90 bp | CAACCTAGCTACAGCCCCTCGCTGAGATGGGAAGGCAAAGGTCTCCCTTTCTCCTACACCACACCACACTaGCCCGAAGTACCAGTAGGC | + |
Preference number: 5 (lower is better) Translates to: QPSYSPSLRWEGKGLPFSYTTPH*PEVPVG Trigger: GCCTACTGGTACTTCGGGCAAGTGTGGTGTGGTGTA...GGAGAAAGGGAGACCTTTGCCTTCCCATCTCAGCGAGGGGCTGTAGCTAGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR CAA 90 bp | CTCTCCTCCCCCAGACAGATGCCTTTTTCAGGTCATAGGAAGTCAGCCCTTGCTGGCGTGCGCTTCAGGTaGTACTCTACCGCTTGCGTC | + |
Preference number: 5 (lower is better) Translates to: LSSPRQMPFSGHRKSALAGVRFR*YSTACV Trigger: GACGCAAGCGGTAGAGTACAACCTGAAGCGCACGCC...AGCAAGGGCTGACTTCCTATGACCTGAAAAAGGCATCTGTCTGGGGGAGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS-3UTR CAA 90 bp | CCCAGACAGATGCCTTTTTCAGGTCATAGGAAGTCAGCCCTTGCTCACAGGGAAATCACCACGAGCACATaGCCTACCACGGTGAAAACG | + |
Preference number: 5 (lower is better) Translates to: PRQMPFSGHRKSALAHREITTST*PTTVKT Trigger: CGTTTTCACCGTGGTAGGCAATGTGCTCGTGGTGAT...TTCCCTGTGAGCAAGGGCTGACTTCCTATGACCTGAAAAAGGCATCTGTCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 72 bp | CCGGGGCCTGGGGACCGAGACGCCGTCCGAGCACCCTaGTCGGCTGCCAGTCCCGGTCCCGGTCCGTCCGCA | + |
Preference number: 6 (lower is better) Translates to: PGPGDRDAVRAP*SAASPGPGPSA Trigger: TGCGGACGGACCGGGACCGGGACTGGCAGCCGAGCAGGGTGCTCGGACGGCGTCTCGGTCCCCAGGCCCCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS CCA 72 bp | CCCCGCCACAGCACCTGCGGAGTACTGGCCCGGCGGTaGCACCCAGTCGGTCCCCGAGGCGTTGGCACCCCC | + |
Preference number: 6 (lower is better) Translates to: PRHSTCGVLARR*HPVGPRGVGTP Trigger: GGGGGTGCCAACGCCTCGGGGACCGACTGGGTGCCACCGCCGGGCCAGTACTCCGCAGGTGCTGTGGCGGGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS CCA 72 bp | GCCGACGCGACAGGAAGAACTCGACGGAGCGCGAGCTaGCCCGCGACAGGCGCCCTCCGGGGCCTGGGGACC | + |
Preference number: 6 (lower is better) Translates to: ADATGRTRRSAS*PATGALRGLGT Trigger: GGTCCCCAGGCCCCGGAGGGCGCCTGTCGCGGGCCAGCTCGCGCTCCGTCGAGTTCTTCCTGTCGCGTCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS TCA 72 bp | ACGCGCCGTCGGGGCCGGCGGGGCCGCGTTTCTCGCTaGGCGTACGCGTGCGCAGCTTGGCCACGCGGTAGA | + |
Preference number: 6 (lower is better) Translates to: TRRRGRRGRVSR*AYACAAWPRGR Trigger: TCTACCGCGTGGCCAAGCTGCGCACGCGTACGCTCAGCGAGAAACGCGGCCCCGCCGGCCCCGACGGCGCGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 72 bp | TGGGGACCGAGACGCCGTCCGAGCACCCTGCTCGGCTaGCAGTCCCGGTCCCGGTCCGTCCGCACTGCCCGT | + |
Preference number: 6 (lower is better) Translates to: WGPRRRPSTLLG*QSRSRSVRTAR Trigger: ACGGGCAGTGCGGACGGACCGGGACCGGGACTGGCAGCCGAGCAGGGTGCTCGGACGGCGTCTCGGTCCCCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 72 bp | CGCGTGCCTGGGCCACCTTGCGGCGGCACACACTGCTaGGCGCCCGGCGCCGACGCGACAGGAAGAACTCGA | + |
Preference number: 6 (lower is better) Translates to: RVPGPPCGGTHC*APGADATGRTR Trigger: TCGAGTTCTTCCTGTCGCGTCGGCGCCGGGCGCGCAGCAGTGTGTGCCGCCGCAAGGTGGCCCAGGCACGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS CCA 72 bp | ACAGCTGCCAACCCCGCCACAGCACCTGCGGAGTACTaGCCCGGCGGTGGCACCCAGTCGGTCCCCGAGGCG | + |
Preference number: 6 (lower is better) Translates to: TAANPATAPAEY*PGGGTQSVPEA Trigger: CGCCTCGGGGACCGACTGGGTGCCACCGCCGGGCCAGTACTCCGCAGGTGCTGTGGCGGGGTTGGCAGCTGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 72 bp | TCTCGCGTGCCTGGGCCACCTTGCGGCGGCACACACTaGTGCGCGCCCGGCGCCGACGCGACAGGAAGAACT | + |
Preference number: 6 (lower is better) Translates to: SRVPGPPCGGTH*CAPGADATGRT Trigger: AGTTCTTCCTGTCGCGTCGGCGCCGGGCGCGCAGCAGTGTGTGCCGCCGCAAGGTGGCCCAGGCACGCGAGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS CAA 72 bp | ACGAAGGTGAAGCGCTTCTCGCGTGCCTGGGCCACCTaGCGGCGGCACACACTGCTGCGCGCCCGGCGCCGA | + |
Preference number: 6 (lower is better) Translates to: TKVKRFSRAWAT*RRHTLLRARRR Trigger: TCGGCGCCGGGCGCGCAGCAGTGTGTGCCGCCGCAAGGTGGCCCAGGCACGCGAGAAGCGCTTCACCTTCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 72 bp | TCTCGGCCGCACTGCTCTCATCCGGCTCCACTTCAGTaGGCGGGGGCGCGCAATGCCCGTTCTCCCCCGCTG | + |
Preference number: 6 (lower is better) Translates to: SRPHCSHPAPLQ*AGARNARSPPL Trigger: CAGCGGGGGAGAACGGGCATTGCGCGCCCCCGCGCACTGAAGTGGAGCCGGATGAGAGCAGTGCGGCCGAGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 72 bp | GAAACCCACCACAGCTGCCAACCCCGCCACAGCACCTaGGGAGTACTGGCCCGGCGGTGGCACCCAGTCGGT | + |
Preference number: 6 (lower is better) Translates to: ETHHSCQPRHST*GVLARRWHPVG Trigger: ACCGACTGGGTGCCACCGCCGGGCCAGTACTCCGCAGGTGCTGTGGCGGGGTTGGCAGCTGTGGTGGGTTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS GCA 72 bp | TCATCCGGCTCCACTTCAGTGCGCGGGGGCGCGCAATaGCCGTTCTCCCCCGCTGCCTTGCCCAGCCCATTC | + |
Preference number: 6 (lower is better) Translates to: SSGSTSVRGGAQ*PFSPAALPSPF Trigger: GAATGGGCTGGGCAAGGCAGCGGGGGAGAACGGGCATTGCGCGCCCCCGCGCACTGAAGTGGAGCCGGATGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |
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CDS CAA 72 bp | GCTCGGCTGGTCAACACAGCGATCACCACGAGCACATaGCCTACCACGGTGAAAACGATGAGGAAACCCACC | + |
Preference number: 6 (lower is better) Translates to: ARLVNTAITTST*PTTVKTMRKPT Trigger: GGTGGGTTTCCTCATCGTTTTCACCGTGGTAGGCAATGTGCTCGTGGTGATCGCTGTGTTGACCAGCCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049545.7 |