Pregenerated sensors for ADRA1D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027335Ensembl transcript IDs: ENSMUST00000103184.4
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCTGCCCGCCTCGAGGCTaGGCGTGGTGCTGCGCGCGA | + |
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Preference number: 4 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLCPPRG*AWCCAR Trigger: TCGCGCGCAGCACCACGCGCAGCCTCGAGGCGGGCA...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR GCA 90 bp | ATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTCGGCTGCGCGTGGTGCTaGGCGCGACCACATACACGC | + |
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Preference number: 4 (lower is better) Translates to: IRRQNPIKHPTSGPSTLLGCAWC*ARPHTR Trigger: GCGTGTATGTGGTCGCGCGCAGCACCACGCGCAGCC...GAGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CCA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCCTCGAGGCTGCGCGTaGTGCTGCGCGCGACCACAT | + |
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Preference number: 4 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLPRGCA*CCARPH Trigger: ATGTGGTCGCGCGCAGCACCACGCGCAGCCTCGAGG...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR GCA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCGAGGCTGCGCGTGGTaGTGCGCGCGACCACATACA | + |
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Preference number: 4 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLRGCAW*CARPHT Trigger: TGTATGTGGTCGCGCGCAGCACCACGCGCAGCCTCG...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CCA 90 bp | GATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTTCTGCCGTGGAGCTCTaGTTGTCCTCGCCGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: DPKAESYKAPHLWPQHPPSAVEL*LSSPLP Trigger: CGGCAGCGGCGAGGACAACCAGAGCTCCACGGCAGA...AGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR TCA 90 bp | TTGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTGGAGGAAGGCGCGCTTaGACTCGCGACTGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LDPKAESYKAPHLWPQHPGGRRA*TRDWSR Trigger: CCTGCTCCAGTCGCGAGTTCAAGCGCGCCTTCCTCC...AGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CCA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCGTGACCGTCTGCAAGTaGCGGTTGCAGGCCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLVTVCK*RLQATE Trigger: CTCCGTGGCCTGCAACCGCCACTTGCAGACGGTCAC...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR GCA 90 bp | ATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTCTTACGGAGAGCGAGCTaGGCAAGGTGTGCCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: IRRQNPIKHPTSGPSTLLLRRAS*ARCAPC Trigger: GCAAGGGGCACACCTTGCGCAGCTCGCTCTCCGTAA...GAGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR TCA 90 bp | ATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTCACACGCGGCAGTACATaGCCACGATCACTGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: IRRQNPIKHPTSGPSTLLTRGST*PRSLPW Trigger: CCATGGCAGTGATCGTGGTCATGTACTGCCGCGTGT...GAGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR TCA 90 bp | ATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTCCATAAGCCTGGCAGATaGCAGCCTCTGCCCCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: IRRQNPIKHPTSGPSTLLHKPGR*QPLPRL Trigger: AAGACGGGGCAGAGGCTGTCATCTGCCAGGCTTATG...GAGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CCA 90 bp | TTGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTGGATACTTGAGCGAGTaGCGCACACCCACGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LDPKAESYKAPHLWPQHPGYLSE*RTPTYR Trigger: CCGGTACGTGGGTGTGCGCCACTCGCTCAAGTATCC...AGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CCA 90 bp | GATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTAGAGCAGAGCCAGAATaGCAGCGGCCTTGCGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPKAESYKAPHLWPQHPPRAEPE*QRPCVL Trigger: CAGAACGCAAGGCCGCTGCCATTCTGGCTCTGCTCT...AGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CCA 90 bp | TTGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTGCTGCGCCGCGACAGTaGATCCTCAGAACCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: LDPKAESYKAPHLWPQHPAAPRQ*ILRTTS Trigger: TGAGGTGGTTCTGAGGATCCACTGTCGCGGCGCAGC...AGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CCA 90 bp | GATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTAGACACCCACGACGATaGCTAGGGTCTTGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: DPKAESYKAPHLWPQHPPRHPRR*LGSWQP Trigger: AGGCTGCCAAGACCCTAGCCATCGTCGTGGGTGTCT...AGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CCA 90 bp | TTGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTACCTTCGCACGCAGCTaGGTCGTGGGTCTCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDPKAESYKAPHLWPQHPTFARS*VVGLCS Trigger: GCTACAGAGACCCACGACCCAGCTGCGTGCGAAGGT...AGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR TCA 90 bp | GATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTTGGAGCAGGGGTAGATaGGCGGGTTCACACAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: DPKAESYKAPHLWPQHPPWSRGR*AGSHSY Trigger: ATAGCTGTGTGAACCCGCTCATCTACCCCTGCTCCA...AGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR GCA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCGCAAGGTGTGCCCCTTaGTACTCTGTGTCCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLARCAP*YSVSLD Trigger: ATCCAGGGACACAGAGTAGCAAGGGGCACACCTTGC...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR TCA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTTGAAGACGCCCTCTaGTGGTTTCAGCTGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLLEDAL*WFQLRE Trigger: TTCCCTCAGCTGAAACCATCAGAGGGCGTCTTCAAG...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CCA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCCACGATCACTGCCATaGGGAGGTAGAAGGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLPRSLP*GGRRSI Trigger: TATGCTCCTTCTACCTCCCCATGGCAGTGATCGTGG...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR TCA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCGGTTCACACAGCTATTaGAGTAGCCCAGCCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLGSHSY*SSPARR Trigger: TCTTCTGGCTGGGCTACTTCAATAGCTGTGTGAACC...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR GCA 90 bp | TTGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCATGACCACGATCACTaGCATGGGGAGGTAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDPKAESYKAPHLWPQHPHDHDH*HGEVEG Trigger: TCCTTCTACCTCCCCATGGCAGTGATCGTGGTCATG...AGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CCA 90 bp | ATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTCGCTACTCTGTGTCCCTaGATTTCCTTTGGCGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: IRRQNPIKHPTSGPSTLLATLCP*ISFGAS Trigger: ACTAGCGCCAAAGGAAATCCAGGGACACAGAGTAGC...GAGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 90 bp | GGTTGTCCTCGCCGCTGCCGGTTCCCACCACAGCGCTACCGCCTGTaGCACCCGGCACGCCGCCCACCGCCGGACCCTCGGGGCCAACCG | + |
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Preference number: 5 (lower is better) Translates to: GCPRRCRFPPQRYRL*HPARRPPPDPRGQP Trigger: CGGTTGGCCCCGAGGGTCCGGCGGTGGGCGGCGTGCCGGGTGCCACAGGCGGTAGCGCTGTGGTGGGAACCGGCAGCGGCGAGGACAACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS GCA 90 bp | CCGCGGCCCCCGCTTCTGCCGTGGAGCTCTGGTTGTCCTCGCCGCTaGCGGTTCCCACCACAGCGCTACCGCCTGTGGCACCCGGCACGC | + |
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Preference number: 5 (lower is better) Translates to: PRPPLLPWSSGCPRR*RFPPQRYRLWHPAR Trigger: GCGTGCCGGGTGCCACAGGCGGTAGCGCTGTGGTGGGAACCGGCAGCGGCGAGGACAACCAGAGCTCCACGGCAGAAGCGGGGGCCGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS GCA 90 bp | TCCCGGAGGGCGGAGGCTGGCTTTCGACGGCCGGAGACCGAAGCCTaGGCCTCCGGCGTGTCTACGGAGCCCGGGCCTGGGTGTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SRRAEAGFRRPETEA*ASGVSTEPGPGCAV Trigger: CACTGCACACCCAGGCCCGGGCTCCGTAGACACGCCGGAGGCGCAGGCTTCGGTCTCCGGCCGTCGAAAGCCAGCCTCCGCCCTCCGGGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 90 bp | CCGAGCCATTCACCTCGCCGCTTGCCGCGGCCCCCGCTTCTGCCGTaGAGCTCTGGTTGTCCTCGCCGCTGCCGGTTCCCACCACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PSHSPRRLPRPPLLP*SSGCPRRCRFPPQR Trigger: GCGCTGTGGTGGGAACCGGCAGCGGCGAGGACAACCAGAGCTCCACGGCAGAAGCGGGGGCCGCGGCAAGCGGCGAGGTGAATGGCTCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 90 bp | TTCACCTCGCCGCTTGCCGCGGCCCCCGCTTCTGCCGTGGAGCTCTaGTTGTCCTCGCCGCTGCCGGTTCCCACCACAGCGCTACCGCCT | + |
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Preference number: 5 (lower is better) Translates to: FTSPLAAAPASAVEL*LSSPLPVPTTALPP Trigger: AGGCGGTAGCGCTGTGGTGGGAACCGGCAGCGGCGAGGACAACCAGAGCTCCACGGCAGAAGCGGGGGCCGCGGCAAGCGGCGAGGTGAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 90 bp | TCTCCGCGCGCCGCGCGCCCCCAGAGCGGAACTTATGGGACAGGCTaGACACCTTCGCACGCAGCTGGGTCGTGGGTCTCTGTAGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: SPRAARPQSGTYGTG*TPSHAAGSWVSVAA Trigger: GGCCGCTACAGAGACCCACGACCCAGCTGCGTGCGAAGGTGTCCAGCCTGTCCCATAAGTTCCGCTCTGGGGGCGCGCGGCGCGCGGAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 90 bp | GCACACGCAGTCTCCGCGCGCCGCGCGCCCCCAGAGCGGAACTTATaGGACAGGCTGGACACCTTCGCACGCAGCTGGGTCGTGGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: AHAVSARRAPPERNL*DRLDTFARSWVVGL Trigger: GAGACCCACGACCCAGCTGCGTGCGAAGGTGTCCAGCCTGTCCCATAAGTTCCGCTCTGGGGGCGCGCGGCGCGCGGAGACTGCGTGTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS TCA 90 bp | AGTGGATCCTCAGAACCACCTCAGAGGCCTTGCCCGGCTCCCTCTTaGTGCCCGCCTCGAGGCTGCGCGTGGTGCTGCGCGCGACCACAT | + |
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Preference number: 5 (lower is better) Translates to: SGSSEPPQRPCPAPS*CPPRGCAWCCARPH Trigger: ATGTGGTCGCGCGCAGCACCACGCGCAGCCTCGAGGCGGGCATCAAGAGGGAGCCGGGCAAGGCCTCTGAGGTGGTTCTGAGGATCCACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 90 bp | GGAACTTATGGGACAGGCTGGACACCTTCGCACGCAGCTGGGTCGTaGGTCTCTGTAGCGGCCCAAGCAGCCTCCACTCCCGGAGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: GTYGTGWTPSHAAGS*VSVAAQAASTPGGR Trigger: CCGCCCTCCGGGAGTGGAGGCTGCTTGGGCCGCTACAGAGACCCACGACCCAGCTGCGTGCGAAGGTGTCCAGCCTGTCCCATAAGTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 90 bp | CCAGAGCGGAACTTATGGGACAGGCTGGACACCTTCGCACGCAGCTaGGTCGTGGGTCTCTGTAGCGGCCCAAGCAGCCTCCACTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: PERNLWDRLDTFARS*VVGLCSGPSSLHSR Trigger: CCGGGAGTGGAGGCTGCTTGGGCCGCTACAGAGACCCACGACCCAGCTGCGTGCGAAGGTGTCCAGCCTGTCCCATAAGTTCCGCTCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CAA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCGCCGTGGAGCTCTGGTaGTCCTCGCCGCTGCCGGTT | + |
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Preference number: 5 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLAVELW*SSPLPV Trigger: AACCGGCAGCGGCGAGGACAACCAGAGCTCCACGGC...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 90 bp | TGTGTCCCTGGATTTCCTTTGGCGCTAGTGGCTGCGCCGCGACAGTaGATCCTCAGAACCACCTCAGAGGCCTTGCCCGGCTCCCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: CVPGFPLALVAAPRQ*ILRTTSEALPGSLL Trigger: CAAGAGGGAGCCGGGCAAGGCCTCTGAGGTGGTTCTGAGGATCCACTGTCGCGGCGCAGCCACTAGCGCCAAAGGAAATCCAGGGACACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 90 bp | GGAGAGCGAGCTGCGCAAGGTGTGCCCCTTGCTACTCTGTGTCCCTaGATTTCCTTTGGCGCTAGTGGCTGCGCCGCGACAGTGGATCCT | + |
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Preference number: 5 (lower is better) Translates to: GERAAQGVPLATLCP*ISFGASGCAATVDP Trigger: AGGATCCACTGTCGCGGCGCAGCCACTAGCGCCAAAGGAAATCCAGGGACACAGAGTAGCAAGGGGCACACCTTGCGCAGCTCGCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CAA 90 bp | TTGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTTTGCCCGGCTCCCTCTaGATGCCCGCCTCGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LDPKAESYKAPHLWPQHPLPGSL*MPASRL Trigger: CAGCCTCGAGGCGGGCATCAAGAGGGAGCCGGGCAA...AGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CAA 90 bp | GATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTTCAGTCTCCCGGAGGTaGCTGAGGTCGCCCGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: DPKAESYKAPHLWPQHPPSVSRR*LRSPGS Trigger: TGAGCCGGGCGACCTCAGCAACCTCCGGGAGACTGA...AGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS GCA 90 bp | CCCCTTGCTACTCTGTGTCCCTGGATTTCCTTTGGCGCTAGTGGCTaGGCCGCGACAGTGGATCCTCAGAACCACCTCAGAGGCCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: PLATLCPWISFGASG*AATVDPQNHLRGLA Trigger: GGCAAGGCCTCTGAGGTGGTTCTGAGGATCCACTGTCGCGGCGCAGCCACTAGCGCCAAAGGAAATCCAGGGACACAGAGTAGCAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CAA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCAGGATGACGAGAAGGTaGCCCGCCACAGCGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLRMTRR*PATAVR Trigger: CCTCACCGCTGTGGCGGGCAACCTTCTCGTCATCCT...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CAA 90 bp | GATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTGTCTGCAAGTGGCGGTaGCAGGCCACGGAGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: DPKAESYKAPHLWPQHPPVCKWR*QATERM Trigger: CATCCTCTCCGTGGCCTGCAACCGCCACTTGCAGAC...AGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CAA 90 bp | ATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTCACCACCTCAGAGGCCTaGCCCGGCTCCCTCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: IRRQNPIKHPTSGPSTLLTTSEA*PGSLLM Trigger: CATCAAGAGGGAGCCGGGCAAGGCCTCTGAGGTGGT...GAGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CAA 90 bp | GATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTCGCAAGGTGTGCCCCTaGCTACTCTGTGTCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: DPKAESYKAPHLWPQHPPRKVCP*LLCVPG Trigger: TCCAGGGACACAGAGTAGCAAGGGGCACACCTTGCG...AGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 90 bp | GAGCAGAGCCAGAATGGCAGCGGCCTTGCGTTCTGTCATAATGGCTaGATACTTGAGCGAGTGGCGCACACCCACGTACCGGTCCACAGA | + |
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Preference number: 5 (lower is better) Translates to: EQSQNGSGLAFCHNG*ILERVAHTHVPVHR Trigger: TCTGTGGACCGGTACGTGGGTGTGCGCCACTCGCTCAAGTATCCAGCCATTATGACAGAACGCAAGGCCGCTGCCATTCTGGCTCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS GCA 90 bp | CGGGAAAACTTGAGCAGCCTTACGGAGAGCGAGCTGCGCAAGGTGTaGCCCTTGCTACTCTGTGTCCCTGGATTTCCTTTGGCGCTAGTG | + |
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Preference number: 5 (lower is better) Translates to: RENLSSLTESELRKV*PLLLCVPGFPLALV Trigger: CACTAGCGCCAAAGGAAATCCAGGGACACAGAGTAGCAAGGGGCACACCTTGCGCAGCTCGCTCTCCGTAAGGCTGCTCAAGTTTTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CAA 90 bp | GATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCCTATAATGGCTGGATACTaGAGCGAGTGGCGCACACCC | + |
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Preference number: 5 (lower is better) Translates to: DPKAESYKAPHLWPQHPPIMAGY*SEWRTP Trigger: GGGTGTGCGCCACTCGCTCAAGTATCCAGCCATTAT...AGGAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS-3UTR CAA 90 bp | TGGATCCGAAGGCAGAATCCTATAAAGCACCCCACCTCTGGCCCCAGCACCCTCAGCCAGAAGATGACCTaGAAGACGCCCTCTGATGGT | + |
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Preference number: 5 (lower is better) Translates to: WIRRQNPIKHPTSGPSTLSQKMT*KTPSDG Trigger: ACCATCAGAGGGCGTCTTCAAGGTCATCTTCTGGCT...GAGGGTGCTGGGGCCAGAGGTGGGGTGCTTTATAGGATTCTGCCTTCGGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS GCA 72 bp | GCGGAGGCTGGCTTTCGACGGCCGGAGACCGAAGCCTaGGCCTCCGGCGTGTCTACGGAGCCCGGGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AEAGFRRPETEA*ASGVSTEPGPG Trigger: CCCAGGCCCGGGCTCCGTAGACACGCCGGAGGCGCAGGCTTCGGTCTCCGGCCGTCGAAAGCCAGCCTCCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 72 bp | CCGCTTGCCGCGGCCCCCGCTTCTGCCGTGGAGCTCTaGTTGTCCTCGCCGCTGCCGGTTCCCACCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: PLAAAPASAVEL*LSSPLPVPTTA Trigger: CGCTGTGGTGGGAACCGGCAGCGGCGAGGACAACCAGAGCTCCACGGCAGAAGCGGGGGCCGCGGCAAGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 72 bp | CGGCCCAAGCAGCCTCCACTCCCGGAGGGCGGAGGCTaGCTTTCGACGGCCGGAGACCGAAGCCTGCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RPKQPPLPEGGG*LSTAGDRSLRL Trigger: GAGGCGCAGGCTTCGGTCTCCGGCCGTCGAAAGCCAGCCTCCGCCCTCCGGGAGTGGAGGCTGCTTGGGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 90 bp | ACCTCGCCGCTTGCCGCGGCCCCCGCTTCTGCCGTGGAGCTCTGGTaGTCCTCGCCGCTGCCGGTTCCCACCACAGCGCTACCGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TSPLAAAPASAVELW*SSPLPVPTTALPPV Trigger: CACAGGCGGTAGCGCTGTGGTGGGAACCGGCAGCGGCGAGGACAACCAGAGCTCCACGGCAGAAGCGGGGGCCGCGGCAAGCGGCGAGGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 72 bp | TCACCTCGCCGCTTGCCGCGGCCCCCGCTTCTGCCGTaGAGCTCTGGTTGTCCTCGCCGCTGCCGGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPRRLPRPPLLP*SSGCPRRCRFP Trigger: TGGGAACCGGCAGCGGCGAGGACAACCAGAGCTCCACGGCAGAAGCGGGGGCCGCGGCAAGCGGCGAGGTGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 72 bp | GTCTCCGCGCGCCGCGCGCCCCCAGAGCGGAACTTATaGGACAGGCTGGACACCTTCGCACGCAGCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: VSARRAPPERNL*DRLDTFARSWV Trigger: GACCCAGCTGCGTGCGAAGGTGTCCAGCCTGTCCCATAAGTTCCGCTCTGGGGGCGCGCGGCGCGCGGAGAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS GCA 72 bp | CCGCTTCTGCCGTGGAGCTCTGGTTGTCCTCGCCGCTaGCGGTTCCCACCACAGCGCTACCGCCTGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PLLPWSSGCPRR*RFPPQRYRLWH Trigger: GTGCCACAGGCGGTAGCGCTGTGGTGGGAACCGGCAGCGGCGAGGACAACCAGAGCTCCACGGCAGAAGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 90 bp | CAGTGGATCCTCAGAACCACCTCAGAGGCCTTGCCCGGCTCCCTCTaGATGCCCGCCTCGAGGCTGCGCGTGGTGCTGCGCGCGACCACA | + |
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Preference number: 6 (lower is better) Translates to: QWILRTTSEALPGSL*MPASRLRVVLRATT Trigger: TGTGGTCGCGCGCAGCACCACGCGCAGCCTCGAGGCGGGCATCAAGAGGGAGCCGGGCAAGGCCTCTGAGGTGGTTCTGAGGATCCACTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 72 bp | GCCGCGCGCCCCCAGAGCGGAACTTATGGGACAGGCTaGACACCTTCGCACGCAGCTGGGTCGTGGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: AARPQSGTYGTG*TPSHAAGSWVS Trigger: AGAGACCCACGACCCAGCTGCGTGCGAAGGTGTCCAGCCTGTCCCATAAGTTCCGCTCTGGGGGCGCGCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 72 bp | GGATTTCCTTTGGCGCTAGTGGCTGCGCCGCGACAGTaGATCCTCAGAACCACCTCAGAGGCCTTGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: GFPLALVAAPRQ*ILRTTSEALPG Trigger: GCCGGGCAAGGCCTCTGAGGTGGTTCTGAGGATCCACTGTCGCGGCGCAGCCACTAGCGCCAAAGGAAATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 72 bp | GCTGCGCAAGGTGTGCCCCTTGCTACTCTGTGTCCCTaGATTTCCTTTGGCGCTAGTGGCTGCGCCGCGACA | + |
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Preference number: 6 (lower is better) Translates to: AAQGVPLATLCP*ISFGASGCAAT Trigger: TGTCGCGGCGCAGCCACTAGCGCCAAAGGAAATCCAGGGACACAGAGTAGCAAGGGGCACACCTTGCGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 72 bp | AACTTATGGGACAGGCTGGACACCTTCGCACGCAGCTaGGTCGTGGGTCTCTGTAGCGGCCCAAGCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: NLWDRLDTFARS*VVGLCSGPSSL Trigger: GAGGCTGCTTGGGCCGCTACAGAGACCCACGACCCAGCTGCGTGCGAAGGTGTCCAGCCTGTCCCATAAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 90 bp | CTGCGCAAGGTGTGCCCCTTGCTACTCTGTGTCCCTGGATTTCCTTaGGCGCTAGTGGCTGCGCCGCGACAGTGGATCCTCAGAACCACC | + |
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Preference number: 6 (lower is better) Translates to: LRKVCPLLLCVPGFP*ALVAAPRQWILRTT Trigger: GGTGGTTCTGAGGATCCACTGTCGCGGCGCAGCCACTAGCGCCAAAGGAAATCCAGGGACACAGAGTAGCAAGGGGCACACCTTGCGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 72 bp | GTGTGCCCCTTGCTACTCTGTGTCCCTGGATTTCCTTaGGCGCTAGTGGCTGCGCCGCGACAGTGGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: VCPLLLCVPGFP*ALVAAPRQWIL Trigger: GAGGATCCACTGTCGCGGCGCAGCCACTAGCGCCAAAGGAAATCCAGGGACACAGAGTAGCAAGGGGCACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 90 bp | ACCACCAAGGCCACCGCCCAGAGCAGAGCCAGAATGGCAGCGGCCTaGCGTTCTGTCATAATGGCTGGATACTTGAGCGAGTGGCGCACA | + |
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Preference number: 6 (lower is better) Translates to: TTKATAQSRARMAAA*RSVIMAGYLSEWRT Trigger: TGTGCGCCACTCGCTCAAGTATCCAGCCATTATGACAGAACGCAAGGCCGCTGCCATTCTGGCTCTGCTCTGGGCGGTGGCCTTGGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 72 bp | GCAGCGGCCTTGCGTTCTGTCATAATGGCTGGATACTaGAGCGAGTGGCGCACACCCACGTACCGGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: AAALRSVIMAGY*SEWRTPTYRST Trigger: TGTGGACCGGTACGTGGGTGTGCGCCACTCGCTCAAGTATCCAGCCATTATGACAGAACGCAAGGCCGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 72 bp | GCCACCGCCCAGAGCAGAGCCAGAATGGCAGCGGCCTaGCGTTCTGTCATAATGGCTGGATACTTGAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: ATAQSRARMAAA*RSVIMAGYLSE Trigger: CTCGCTCAAGTATCCAGCCATTATGACAGAACGCAAGGCCGCTGCCATTCTGGCTCTGCTCTGGGCGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 90 bp | GCCAGAATGGCAGCGGCCTTGCGTTCTGTCATAATGGCTGGATACTaGAGCGAGTGGCGCACACCCACGTACCGGTCCACAGAGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: ARMAAALRSVIMAGY*SEWRTPTYRSTEMV Trigger: CACCATCTCTGTGGACCGGTACGTGGGTGTGCGCCACTCGCTCAAGTATCCAGCCATTATGACAGAACGCAAGGCCGCTGCCATTCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 90 bp | AACTTGAGCAGCCTTACGGAGAGCGAGCTGCGCAAGGTGTGCCCCTaGCTACTCTGTGTCCCTGGATTTCCTTTGGCGCTAGTGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: NLSSLTESELRKVCP*LLCVPGFPLALVAA Trigger: CGCAGCCACTAGCGCCAAAGGAAATCCAGGGACACAGAGTAGCAAGGGGCACACCTTGCGCAGCTCGCTCTCCGTAAGGCTGCTCAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 90 bp | GGGAACCAGCACAGGACGAAGACACCCACGACGATGGCTAGGGTCTaGGCAGCCTTTTTCTCGCGGGAAAACTTGAGCAGCCTTACGGAG | + |
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Preference number: 6 (lower is better) Translates to: GNQHRTKTPTTMARV*AAFFSRENLSSLTE Trigger: CTCCGTAAGGCTGCTCAAGTTTTCCCGCGAGAAAAAGGCTGCCAAGACCCTAGCCATCGTCGTGGGTGTCTTCGTCCTGTGCTGGTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS GCA 72 bp | ACTCTGTGTCCCTGGATTTCCTTTGGCGCTAGTGGCTaGGCCGCGACAGTGGATCCTCAGAACCACCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TLCPWISFGASG*AATVDPQNHLR Trigger: TCTGAGGTGGTTCTGAGGATCCACTGTCGCGGCGCAGCCACTAGCGCCAAAGGAAATCCAGGGACACAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CCA 72 bp | CAGAATGGCAGCGGCCTTGCGTTCTGTCATAATGGCTaGATACTTGAGCGAGTGGCGCACACCCACGTACCG | + |
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Preference number: 6 (lower is better) Translates to: QNGSGLAFCHNG*ILERVAHTHVP Trigger: CGGTACGTGGGTGTGCGCCACTCGCTCAAGTATCCAGCCATTATGACAGAACGCAAGGCCGCTGCCATTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 72 bp | AGCCTTACGGAGAGCGAGCTGCGCAAGGTGTGCCCCTaGCTACTCTGTGTCCCTGGATTTCCTTTGGCGCTA | + |
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Preference number: 6 (lower is better) Translates to: SLTESELRKVCP*LLCVPGFPLAL Trigger: TAGCGCCAAAGGAAATCCAGGGACACAGAGTAGCAAGGGGCACACCTTGCGCAGCTCGCTCTCCGTAAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS CAA 72 bp | GCTAGGGTCTTGGCAGCCTTTTTCTCGCGGGAAAACTaGAGCAGCCTTACGGAGAGCGAGCTGCGCAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: ARVLAAFFSREN*SSLTESELRKV Trigger: CACCTTGCGCAGCTCGCTCTCCGTAAGGCTGCTCAAGTTTTCCCGCGAGAAAAAGGCTGCCAAGACCCTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS TCA 72 bp | CTAGGGTCTTGGCAGCCTTTTTCTCGCGGGAAAACTTaGGCAGCCTTACGGAGAGCGAGCTGCGCAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: LGSWQPFSRGKT*AALRRASCARC Trigger: ACACCTTGCGCAGCTCGCTCTCCGTAAGGCTGCTCAAGTTTTCCCGCGAGAAAAAGGCTGCCAAGACCCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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| CDS GCA 72 bp | TTGAGCAGCCTTACGGAGAGCGAGCTGCGCAAGGTGTaGCCCTTGCTACTCTGTGTCCCTGGATTTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LSSLTESELRKV*PLLLCVPGFPL Trigger: CAAAGGAAATCCAGGGACACAGAGTAGCAAGGGGCACACCTTGCGCAGCTCGCTCTCCGTAAGGCTGCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103184.4 |
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