Pregenerated sensors for ADRA1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050541Ensembl transcript IDs: ENSMUST00000067258.9, ENSMUST00000139906.2, ENSMUST00000167574.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACCTAGACATCACCAGGGGTCACACTCACTCTGCCCCAGCACATaGTTGCGGGCAGGCCTCACACACGCACCCACGCAGCCCACACGT | + |
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Preference number: 1 (lower is better) Translates to: TPRHHQGSHSLCPST*LRAGLTHAPTQPTR Trigger: ACGTGTGGGCTGCGTGGGTGCGTGTGTGAGGCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR GCA 90 bp | GAAACAAACAACACACCTAGACATCACCAGGGGTCACACTCACTCTaGCCCAGCACATGCTTGCGGGCAGGCCTCACACACGCACCCACG | + |
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Preference number: 1 (lower is better) Translates to: ETNNTPRHHQGSHSL*PSTCLRAGLTHAPT Trigger: CGTGGGTGCGTGTGTGAGGCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTTGTTTGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR CCA 90 bp | GCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTTaGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCCCATGC | + |
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Preference number: 1 (lower is better) Translates to: ALPCVSQRSNSGPQA*QRTPLPAQCLAGPC Trigger: GCATGGGCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR TCA 90 bp | CACAAGGCTCTCCTTCACAAATCACTCAAAGGCGCACAGGAGAAATaGTCTTTAATATTTGACTTGTTTTCCGACCCTATCAAAGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: HKALLHKSLKGAQEK*SLIFDLFSDPIKGP Trigger: TGGCCCTTTGATAGGGTCGGAAAACAAGTCAAATATTAAAGATCATTTCTCCTGTGCGCCTTTGAGTGATTTGTGAAGGAGAGCCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR CAA 90 bp | CCTAGACATCACCAGGGGTCACACTCACTCTGCCCCAGCACATGCTaGCGGGCAGGCCTCACACACGCACCCACGCAGCCCACACGTACA | + |
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Preference number: 2 (lower is better) Translates to: PRHHQGSHSLCPSTC*RAGLTHAPTQPTRT Trigger: TGTACGTGTGGGCTGCGTGGGTGCGTGTGTGAGGCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCCTCTGCCCCAGCACATaGTTGCGGGCAGGCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: ELRSSGLAANTFTCSVSCLCPST*LRAGLT Trigger: TGTGAGGCCTGCCCGCAAGCATGTGCTGGGGCAGAG...GCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR GCA 90 bp | GATCGAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTGGCACCCATGCCTCTaGCAGAAAAGCAGCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: DRTQVLRLGSEHLYLLSVWHPCL*QKSSCP Trigger: GGGGCAGCTGCTTTTCTGGCAGAGGCATGGGTGCCA...GACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCTGTACCTGGCACCCATaGCTCTGCCAGAAAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SGPQAWQRTPLPAQCLAGCTWHP*LCQKSS Trigger: GCTGCTTTTCTGGCAGAGGCATGGGTGCCAGGTACA...GCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGTCCAGACTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCGCTCTTCGCTGTACCTaGCACCCATGCCTCTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ARVQTLLYLVCPRDRTQVALRCT*HPCLCQ Trigger: CTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGC...GACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAGTCTGGACTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR GCA 90 bp | GATCGAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTGTACCTGGCACCCATaGCTCTGCCAGAAAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: DRTQVLRLGSEHLYLLSVCTWHP*LCQKSS Trigger: GCTGCTTTTCTGGCAGAGGCATGGGTGCCAGGTACA...GACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR CAA 90 bp | TGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTaGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCCCATG | + |
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Preference number: 2 (lower is better) Translates to: CFTLCVPEIELRSSG*AANTFTCSVSCWPM Trigger: CATGGGCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCGAGCAGGGAGGGGTTTaGGAGGTACAAAGTCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SGPQAWQRTPLPAQCLAGEQGGV*EVQSQE Trigger: TTCTTGACTTTGTACCTCTCAAACCCCTCCCTGCTC...GCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTTGGCAGAGCAGGGAGGGGTTTaGGAGGTACAAAGTCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LCFTLCVPEIELRSSGLAEQGGV*EVQSQE Trigger: TTCTTGACTTTGTACCTCTCAAACCCCTCCCTGCTC...TGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTGTAGGATACTTGTGTACCTTGGAAGTTGTGATTAACCCAGGAGATCCAGCCCCAGCACATGCTTaGGGGCAGGCCTCACACACG | + |
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Preference number: 2 (lower is better) Translates to: FSVGYLCTLEVVINPGDPAPAHA*GQASHT Trigger: CGTGTGTGAGGCCTGCCCGCAAGCATGTGCTGGGGC...TGGATCTCCTGGGTTAATCACAACTTCCAAGGTACACAAGTATCCTACACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTGTGTGTGTACAAGCCCAGTGGTATAATGCATGGGAGGAGGTCAGAGCATGCGAACACCTTTACCTaGTCAGTGTCTTGCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LVCVYKPSGIMHGRRSEHANTFT*SVSCWP Trigger: GGGCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGC...ATGCTCTGACCTCCTCCCATGCATTATACCACTGGGCTTGTACACACACACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCGCCCCAGCACATGCTTaGGGGCAGGCCTCACACACG | + |
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Preference number: 2 (lower is better) Translates to: VCTFWNGLVYSFCGIDSSAPAHA*GQASHT Trigger: CGTGTGTGAGGCCTGCCCGCAAGCATGTGCTGGGGC...GGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGTACACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTCCCAGGCTCTCAGCATaGTCAGCCCAGCTCTTCGCT | + |
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Preference number: 2 (lower is better) Translates to: IVFVVLTPPRSPLVSTSVPRLSA*SAQLFA Trigger: AGCGAAGAGCTGGGCTGAGCATGCTGAGAGCCTGGG...AACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGTCAATACCACAAAAACTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCTGGCACCCATGCCTCTaGCAGAAAAGCAGCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: VCTFWNGLVYSFCGIDSSWHPCL*QKSSCP Trigger: GGGGCAGCTGCTTTTCTGGCAGAGGCATGGGTGCCA...GGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGTACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCTTGTGTGTGTGTACAAGCCCAGTGGTATAATGCATGGGAGGAGGTCAGAGTGTCTTGCTGGCCCATaGCAAAATCTTAACCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: VLVCVYKPSGIMHGRRSECLAGP*QNLNLS Trigger: ACTGAGGTTAAGATTTTGGCATGGGCCAGCAAGACA...CTCTGACCTCCTCCCATGCATTATACCACTGGGCTTGTACACACACACAAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGTGTGTGTACAAGCCCAGTGGTATAATGCATGGGAGGAGGTCAGAGCATGGCGCACAGGAGAAATaGTCTTTAATATTTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: LVCVYKPSGIMHGRRSEHGAQEK*SLIFDL Trigger: CAAGTCAAATATTAAAGATCATTTCTCCTGTGCGCC...ATGCTCTGACCTCCTCCCATGCATTATACCACTGGGCTTGTACACACACACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTGGATTTGATCAGACCTaGAGGAAGAGGAAACACAAG | + |
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Preference number: 2 (lower is better) Translates to: IVFVVLTPPRSPLVSTSVGFDQT*RKRKHK Trigger: CTTGTGTTTCCTCTTCCTTCAGGTCTGATCAAATCC...AACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGTCAATACCACAAAAACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGGGATTTGATCAGACCTaGAGGAAGAGGAAACACAAG | + |
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Preference number: 2 (lower is better) Translates to: TFWNGLVYSFCGIDSSKEGFDQT*RKRKHK Trigger: CTTGTGTTTCCTCTTCCTTCAGGTCTGATCAAATCC...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR GCA 72 bp | CATCACCAGGGGTCACACTCACTCTGCCCCAGCACATaGTTGCGGGCAGGCCTCACACACGCACCCACGCAG | + |
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Preference number: 3 (lower is better) Translates to: HHQGSHSLCPST*LRAGLTHAPTQ Trigger: CTGCGTGGGTGCGTGTGTGAGGCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGCCCCAGCACATGCTaGCGGGCAGGCCTCACACAC | + |
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Preference number: 3 (lower is better) Translates to: ELRSSGLAANTFTCSVSCCPSTC*RAGLTH Trigger: GTGTGTGAGGCCTGCCCGCAAGCATGTGCTGGGGCA...GCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR GCA 72 bp | AACACACCTAGACATCACCAGGGGTCACACTCACTCTaGCCCAGCACATGCTTGCGGGCAGGCCTCACACAC | + |
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Preference number: 3 (lower is better) Translates to: NTPRHHQGSHSL*PSTCLRAGLTH Trigger: GTGTGTGAGGCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTTGGCATGCCCCAGCACATGCTaGCGGGCAGGCCTCACACAC | + |
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Preference number: 3 (lower is better) Translates to: LCFTLCVPEIELRSSGLACPSTC*RAGLTH Trigger: GTGTGTGAGGCCTGCCCGCAAGCATGTGCTGGGGCA...TGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCTCAGCCCAGCTCTTCGCTGTACCTGGCACCCATGCCTCTGCCAGAAAAGCTGTCCCCTTGAGACCTaGTGTCTACTCAGGACTGAC | + |
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Preference number: 3 (lower is better) Translates to: MLSPALRCTWHPCLCQKSCPLET*CLLRTD Trigger: GTCAGTCCTGAGTAGACACAAGGTCTCAAGGGGACA...GCTTTTCTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGCTGGGCTGAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR CCA 72 bp | TGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTTaGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: CVSQRSNSGPQA*QRTPLPAQCLA Trigger: AGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR CCA 72 bp | CTTGTTTTCCGACCCTATCAAAGGGCCAGCATTGACTaGAGAGCAGGGAGGGGTTTGAGAGGTACAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LVFRPYQRASID*RAGRGLRGTKS Trigger: TGACTTTGTACCTCTCAAACCCCTCCCTGCTCTCCAGTCAATGCTGGCCCTTTGATAGGGTCGGAAAACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCGGATACTTGTGTACCTaGGAAGTTGTGATTAACCCA | + |
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Preference number: 3 (lower is better) Translates to: ELRSSGLAANTFTCSVSCGYLCT*EVVINP Trigger: TGGGTTAATCACAACTTCCAAGGTACACAAGTATCC...GCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR TCA 72 bp | AAAGGGCCAGCATTGACTGGAGAGCAGGGAGGGGTTTaGGAGGTACAAAGTCAAGAAACAAACAACACACCT | + |
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Preference number: 3 (lower is better) Translates to: KGPALTGEQGGV*EVQSQETNNTP Trigger: AGGTGTGTTGTTTGTTTCTTGACTTTGTACCTCTCAAACCCCTCCCTGCTCTCCAGTCAATGCTGGCCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCCTTTTTGGAATGGCCTaGTCTATAGTTTTTGTGGTA | + |
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Preference number: 3 (lower is better) Translates to: ELRSSGLAANTFTCSVSCLFGMA*SIVFVV Trigger: TACCACAAAAACTATAGACAAGGCCATTCCAAAAAG...GCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAACATTGCTATTACATTGTGTGTGTGCTTGTGTGTGTGTACAAGCCCAGTGTGTCCCCTTGAGACCTaGTGTCTACTCAGGACTGAC | + |
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Preference number: 3 (lower is better) Translates to: KNIAITLCVCLCVCTSPVCPLET*CLLRTD Trigger: GTCAGTCCTGAGTAGACACAAGGTCTCAAGGGGACA...CACTGGGCTTGTACACACACACAAGCACACACACAATGTAATAGCAATGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTGTAGGATACTTGTGTACCTTGGAAGTTGTGATTAACCCAGGAGATCCAAGAGCAGGGAGGGGTTaGAGAGGTACAAAGTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: FSVGYLCTLEVVINPGDPRAGRG*RGTKSR Trigger: TCTTGACTTTGTACCTCTCAAACCCCTCCCTGCTCT...TGGATCTCCTGGGTTAATCACAACTTCCAAGGTACACAAGTATCCTACACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR-3UTR CAA 90 bp | CTAATTGTCTGCAAATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAGTTTTTGTGGTATaGACTCCTCCAAGGAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: LIVCKYVCVCVCVCVCVCIVFVV*TPPRSP Trigger: AGGACTCCTTGGAGGAGTCAATACCACAAAAACTAT...ACACACACACACACACACACACACACACACACACACATATTTGCAGACAATTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR TCA 72 bp | CTCCTTCACAAATCACTCAAAGGCGCACAGGAGAAATaGTCTTTAATATTTGACTTGTTTTCCGACCCTATC | + |
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Preference number: 3 (lower is better) Translates to: LLHKSLKGAQEK*SLIFDLFSDPI Trigger: GATAGGGTCGGAAAACAAGTCAAATATTAAAGATCATTTCTCCTGTGCGCCTTTGAGTGATTTGTGAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | AGACATCACCAGGGGTCACACTCACTCTGCCCCAGCACATGCTTGCGGGCAGGCGTATCCCGGGCTGGGTaGCGCCGAGGGCAGGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: RHHQGSHSLCPSTCLRAGVSRAG*RRGQGP Trigger: CGGACCCTGCCCTCGGCGTCACCCAGCCCGGGATAC...GCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR CAA 72 bp | CACCAGGGGTCACACTCACTCTGCCCCAGCACATGCTaGCGGGCAGGCCTCACACACGCACCCACGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: HQGSHSLCPSTC*RAGLTHAPTQP Trigger: GGGCTGCGTGGGTGCGTGTGTGAGGCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | TCAGCATGCTCAGCCCAGCTCTTCGCTGTACCTGGCACCCATGCCTCTGCCAGAGCGGCCAGGAGGCTCTaGCAGGCTGAGCAGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SACSAQLFAVPGTHASARAARRL*QAEQRS Trigger: GGAGCGCTGCTCAGCCTGCCAGAGCCTCCTGGCCGC...TCTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGCTGGGCTGAGCATGCTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | ATGCTCAGCCCAGCTCTTCGCTGTACCTGGCACCCATGCCTCTGCCAGAAAAGCCCAGGTATCCCGGGCTaGGTGACGCCGAGGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: MLSPALRCTWHPCLCQKSPGIPG*VTPRAG Trigger: CCCTGCCCTCGGCGTCACCCAGCCCGGGATACCTGG...GCTTTTCTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGCTGGGCTGAGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | TCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCGGGGCATGTTGCTCTTaGAGCCCGGCTGCCCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SGPQAWQRTPLPAQCLAGGACCS*SPAARW Trigger: CCAACGGGCAGCCGGGCTTCAAGAGCAACATGCCCC...GCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | CCTCCCCTTTGTCCCCTTGAGACCTTGTGTCTACTCAGGACTGACACACTCCCCGGGGCATGTTGCTCTTaGAGCCCGGCTGCCCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PPLCPLETLCLLRTDTLPGACCS*SPAARW Trigger: CCAACGGGCAGCCGGGCTTCAAGAGCAACATGCCCC...GGGGAGTGTGTCAGTCCTGAGTAGACACAAGGTCTCAAGGGGACAAAGGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR GCA 90 bp | CAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCCGGGGCAGTGTGGAGTTaGTCGAGGTCTGGTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QVLRLGSEHLYLLSVLLAGAVWS*SRSGWG Trigger: GCCCCAACCAGACCTCGAGCAACTCCACACTGCCCC...GGCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR GCA 90 bp | TCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCGAGTCCTTCCGCGACTaGGACCTCTCCAGCGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGPQAWQRTPLPAQCLAGESFRD*DLSSEP Trigger: CGGCTCGCTGGAGAGGTCGCAGTCGCGGAAGGACTC...GCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR GCA 90 bp | GATCGAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCGCAGGGTCCGCTGGCTaGCGCTCATGCAGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DRTQVLRLGSEHLYLLSVAGSAG*RSCSCH Trigger: GTGGCAGCTGCATGAGCGGCAGCCAGCGGACCCTGC...GACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | GATCGAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCGAGGGCAGGGTCCGCTaGCTGCCGCTCATGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DRTQVLRLGSEHLYLLSVEGRVR*LPLMQL Trigger: CAGCTGCATGAGCGGCAGCCAGCGGACCCTGCCCTC...GACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR TCA 90 bp | GTCAAGAAACAAACAACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCGTATCCCGGGCTGGGTaGCGCCGAGGGCAGGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VKKQTTHLDITRGHTHSAVSRAG*RRGQGP Trigger: CGGACCCTGCCCTCGGCGTCACCCAGCCCGGGATAC...GGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTTGTTTGTTTCTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCATGCTCAGCCCAGCTCTTCGCTGTACCTGGCACCCATGCCTCTGCCAGAGGTGCTGATGTGTTGTaGCCGGTGTCCAGATCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SACSAQLFAVPGTHASARGADVL*PVSRSG Trigger: TCCCGATCTGGACACCGGCCACAACACATCAGCACC...TCTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGCTGGGCTGAGCATGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTGTGGCACCTGAATACCTCGCGGCCAGGAGGCTCTaGCAGGCTGAGCAGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPPRSPLVSTSVVAPEYLAARRL*QAEQRS Trigger: GGAGCGCTGCTCAGCCTGCCAGAGCCTCCTGGCCGC...GAGGTATTCAGGTGCCACAACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR TCA 90 bp | GATCGAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCCCAGTGGGCAGGTGCTaGTGTGTTGTGGCCGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DRTQVLRLGSEHLYLLSVPVGRC*CVVAGV Trigger: GACACCGGCCACAACACATCAGCACCTGCCCACTGG...GACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR GCA 90 bp | GCACCCACGCAGCCCACACGTACACCAAACAGACACACGCACGTGTACCCACAGAGATGTCACAGAAGATaGGCCCCAGCACCCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: APTQPTRTPNRHTHVYPQRCHRR*APAPSS Trigger: GCTACTGGGTGCTGGGGCGCATCTTCTGTGACATCT...CTGTGGGTACACGTGCGTGTGTCTGTTTGGTGTACGTGTGGGCTGCGTGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCCCAGCTATGGAACTCCTaGGGTTGTGGCCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLRLGSEHLYLLSVLLAQLWNS*GCGPWP Trigger: AGGCCAAGGGCCACAACCCCAGGAGTTCCATAGCTG...GGCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCTTTGTCCCCTTGAGACCTTGTGTCTACTCAGGACTGACACACTCCCCCCGGGGGCTTTAGGGTaGAGAACAGGGAGCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPLCPLETLCLLRTDTLPPGALG*RTGSQV Trigger: CACTTGGCTCCCTGTTCTCCACCCTAAAGCCCCCGG...GGGGAGTGTGTCAGTCCTGAGTAGACACAAGGTCTCAAGGGGACAAAGGGGAGG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTTGTGTGTGTGTACAAGCCCAGTGGTATAATGCATGGGAGGAGGTCAGAGGAGGGCAGGGTCCGCTaGCTGCCGCTCATGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLVCVYKPSGIMHGRRSEEGRVR*LPLMQL Trigger: CAGCTGCATGAGCGGCAGCCAGCGGACCCTGCCCTC...CTCTGACCTCCTCCCATGCATTATACCACTGGGCTTGTACACACACACAAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTCCGACCCTATCAAAGGGCCAGCATTGACTGGAGAGCAGGGAGGGGTTTGAGCCCGGCTGCCCGTTaGCCAGGTCAGTTGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFRPYQRASIDWRAGRGLSPAAR*PGQLWC Trigger: ACACCACAACTGACCTGGCCAACGGGCAGCCGGGCT...CAAACCCCTCCCTGCTCTCCAGTCAATGCTGGCCCTTTGATAGGGTCGGAAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTCCGACCCTATCAAAGGGCCAGCATTGACTGGAGAGCAGGGAGGGGTTTGGAGGCCCGATGGAGATaGCCGTGGACAAGACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VFRPYQRASIDWRAGRGLEARWR*PWTRPT Trigger: TGTGGGTCTTGTCCACGGTCATCTCCATCGGGCCTC...CAAACCCCTCCCTGCTCTCCAGTCAATGCTGGCCCTTTGATAGGGTCGGAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR TCA 90 bp | GCACCCACGCAGCCCACACGTACACCAAACAGACACACGCACGTGTACCCACAGCAAGTGGGAGAGCGATaGAGAAGGGGAGCCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: APTQPTRTPNRHTHVYPQQVGER*RRGANI Trigger: TATGTTGGCTCCCCTTCTTCATCGCTCTCCCACTTG...CTGTGGGTACACGTGCGTGTGTCTGTTTGGTGTACGTGTGGGCTGCGTGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTGTGTGTACAAGCCCAGTGGTATAATGCATGGGAGGAGGTCAGAGCATGAGGCTCTGGCAGGCTaGGCAGCGCTCCGGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVCVYKPSGIMHGRRSEHEALAG*AALRVS Trigger: GGAAACCCGGAGCGCTGCTCAGCCTGCCAGAGCCTC...ATGCTCTGACCTCCTCCCATGCATTATACCACTGGGCTTGTACACACACACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR TCA 90 bp | GTCAAGAAACAAACAACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCGAGGCTCTGGCAGGCTaGGCAGCGCTCCGGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKKQTTHLDITRGHTHSAEALAG*AALRVS Trigger: GGAAACCCGGAGCGCTGCTCAGCCTGCCAGAGCCTC...GGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTTGTTTGTTTCTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTTGGCAGGGGCAGTGTGGAGTTaGTCGAGGTCTGGTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCFTLCVPEIELRSSGLAGAVWS*SRSGWG Trigger: GCCCCAACCAGACCTCGAGCAACTCCACACTGCCCC...TGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTTGTGTGTGTGTACAAGCCCAGTGGTATAATGCATGGGAGGAGGTCAGAGGAGTCCTTCCGCGACTaGGACCTCTCCAGCGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLVCVYKPSGIMHGRRSEESFRD*DLSSEP Trigger: CGGCTCGCTGGAGAGGTCGCAGTCGCGGAAGGACTC...CTCTGACCTCCTCCCATGCATTATACCACTGGGCTTGTACACACACACAAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR GCA 90 bp | GATCGAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCGCTGGCTGCCGCTCATaGAGCTGCCACTGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: DRTQVLRLGSEHLYLLSVAGCRS*SCHCHP Trigger: TGGATGACAGTGGCAGCTGCATGAGCGGCAGCCAGC...GACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR GCA 90 bp | GATCGAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCCTCTTGAAGCCCGGCTaGCCGTTGGCCAGGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DRTQVLRLGSEHLYLLSVLLKPG*PLARSV Trigger: AACTGACCTGGCCAACGGGCAGCCGGGCTTCAAGAG...GACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTCAGCCCAGCTCTTCGCTGTACCTGGCACCCATGCCTCTGCCAGAAAAGCTCTTGGTGGTCCTCTTaGCCACGATGTAGACTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLSPALRCTWHPCLCQKSSWWSS*PRCRLG Trigger: GCCGAGTCTACATCGTGGCCAAGAGGACCACCAAGA...GCTTTTCTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGCTGGGCTGAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | TCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCCAGCTATGGAACTCCTaGGGTTGTGGCCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGPQAWQRTPLPAQCLAGQLWNS*GCGPWP Trigger: AGGCCAAGGGCCACAACCCCAGGAGTTCCATAGCTG...GCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | AACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCCCAGCACATGCTTGACAAGACCCACACACTaGGGAGCGCCAAGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTPRHHQGSHSLCPSTCLTRPTH*GAPRWP Trigger: AGGCCATCTTGGCGCTCCTCAGTGTGTGGGTCTTGT...CAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | AGACATCACCAGGGGTCACACTCACTCTGCCCCAGCACATGCTTGCGGGCAGGCAGAAGGGTTCTTCTGTaGCCCCACATTCTTTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RHHQGSHSLCPSTCLRAGRRVLL*PHILCR Trigger: ACGACAAAGAATGTGGGGTCACAGAAGAACCCTTCT...GCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | ATGCTCAGCCCAGCTCTTCGCTGTACCTGGCACCCATGCCTCTGCCAGAAAAGCTGGCCTTGGTACTGCTaGGGGTGTCCTCATGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MLSPALRCTWHPCLCQKSWPWYC*GCPHES Trigger: ACTTTCATGAGGACACCCTCAGCAGTACCAAGGCCA...GCTTTTCTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGCTGGGCTGAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR GCA 90 bp | CTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTTGGCAGCTGGCTGCCGCTCATaGAGCTGCCACTGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCFTLCVPEIELRSSGLAAGCRS*SCHCHP Trigger: TGGATGACAGTGGCAGCTGCATGAGCGGCAGCCAGC...TGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR GCA 90 bp | CTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTTGGCACTCTTGAAGCCCGGCTaGCCGTTGGCCAGGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFTLCVPEIELRSSGLALLKPG*PLARSV Trigger: AACTGACCTGGCCAACGGGCAGCCGGGCTTCAAGAG...TGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | CTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTTGGCACTGGTGACGTCCAGCTaGGGCAGTGTGGAGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCFTLCVPEIELRSSGLALVTSS*GSVELL Trigger: GAGCAACTCCACACTGCCCCAGCTGGACGTCACCAG...TGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | TCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCGAACAGGGAGCCAAGTaGGAGAGCGATGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGPQAWQRTPLPAQCLAGEQGAK*ESDEEG Trigger: CCCTTCTTCATCGCTCTCCCACTTGGCTCCCTGTTC...GCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | ACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTGTGGCACCTGAATACCTCAGCCCGGCTGCCCGTTaGCCAGGTCAGTTGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPPRSPLVSTSVVAPEYLSPAAR*PGQLWC Trigger: ACACCACAACTGACCTGGCCAACGGGCAGCCGGGCT...GAGGTATTCAGGTGCCACAACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR TCA 90 bp | AACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCCCAGCACATGCTTGAGAAGGGCAGGACTGTaGAGCTCAACAGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTPRHHQGSHSLCPSTCLRRAGL*SSTAGQ Trigger: CTGACCTGCTGTTGAGCTTCACAGTCCTGCCCTTCT...CAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | CTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTTGGCAGGTGCTGATGTGTTGTaGCCGGTGTCCAGATCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCFTLCVPEIELRSSGLAGADVL*PVSRSG Trigger: TCCCGATCTGGACACCGGCCACAACACATCAGCACC...TGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | TCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCTCTGGTTGGGGCCAGTaGAGTTGGCATCTTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SGPQAWQRTPLPAQCLAGSGWGQ*SWHLST Trigger: AGTTGAAAGATGCCAACTTCACTGGCCCCAACCAGA...GCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR GCA 90 bp | TCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCCAGGACATCAACCGCTaGCCAGATGTCACAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGPQAWQRTPLPAQCLAGQDINR*PDVTED Trigger: ATCTTCTGTGACATCTGGGCAGCGGTTGATGTCCTG...GCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR GCA 90 bp | ACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTGTGGCACCTGAATACCTCACCAGCGTGGGGTACTaGAGAGAGTATCGCACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPPRSPLVSTSVVAPEYLTSVGY*REYRTP Trigger: TGGGGTGCGATACTCTCTGCAGTACCCCACGCTGGT...GAGGTATTCAGGTGCCACAACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTTGGCATGCCGCTCATGCAGCTaGCACTGTCATCCAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCFTLCVPEIELRSSGLACRSCS*HCHPES Trigger: ACTCTCTGGATGACAGTGGCAGCTGCATGAGCGGCA...TGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | GATCGAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTCAACTCTCCCCAGTaGGCAGGTGCTGATGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRTQVLRLGSEHLYLLSVFNSPQ*AGADVL Trigger: CAACACATCAGCACCTGCCCACTGGGGAGAGTTGAA...GACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTGTGTGTACAAGCCCAGTGGTATAATGCATGGGAGGAGGTCAGAGCATCCAGCTGGGGCAGTGTaGAGTTGCTCGAGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVCVYKPSGIMHGRRSEHPAGAV*SCSRSG Trigger: ACCAGACCTCGAGCAACTCCACACTGCCCCAGCTGG...ATGCTCTGACCTCCTCCCATGCATTATACCACTGGGCTTGTACACACACACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | GTCAAGAAACAAACAACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCCCGGGGGCTTTAGGGTaGAGAACAGGGAGCCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKKQTTHLDITRGHTHSAPGALG*RTGSQV Trigger: CACTTGGCTCCCTGTTCTCCACCCTAAAGCCCCCGG...GGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTTGTTTGTTTCTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| 3UTR CAA 72 bp | TTGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGCTaGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCVPEIELRSSG*AANTFTCSVSC Trigger: GCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATCTCTGGGACACACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR TCA 90 bp | GTCAAGAAACAAACAACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCACAAGACCCACACACTaGGGAGCGCCAAGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKKQTTHLDITRGHTHSATRPTH*GAPRWP Trigger: AGGCCATCTTGGCGCTCCTCAGTGTGTGGGTCTTGT...GGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTTGTTTGTTTCTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGTCCAGACTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCTTCAACTCTCCCCAGTaGGCAGGTGCTGATGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARVQTLLYLVCPRDRTQVFNSPQ*AGADVL Trigger: CAACACATCAGCACCTGCCCACTGGGGAGAGTTGAA...GACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAGTCTGGACTCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | ATGCTCAGCCCAGCTCTTCGCTGTACCTGGCACCCATGCCTCTGCCAGAAAAGCTCAGGGTCAGCTCTTTaGAGTTGGACATTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MLSPALRCTWHPCLCQKSSGSAL*SWTFPS Trigger: TGAAGGAAATGTCCAACTCCAAAGAGCTGACCCTGA...GCTTTTCTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGCTGGGCTGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CCA 90 bp | ACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTGTGGCACCTGAATACCTCGAACAGGGAGCCAAGTaGGAGAGCGATGAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPPRSPLVSTSVVAPEYLEQGAK*ESDEEG Trigger: CCCTTCTTCATCGCTCTCCCACTTGGCTCCCTGTTC...GAGGTATTCAGGTGCCACAACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGCCAGGTATCCCGGGCTaGGTGACGCCGAGGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFWNGLVYSFCGIDSSKEPGIPG*VTPRAG Trigger: CCCTGCCCTCGGCGTCACCCAGCCCGGGATACCTGG...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| 3UTR CAA 72 bp | GAGCATAACTTGCCAGAGTCCAGACTCTGCTTTACCTaGTGTGTCCCAGAGATCGAACTCAGGTCCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EHNLPESRLCFT*CVPEIELRSSG Trigger: GCCTGAGGACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAGTCTGGACTCTGGCAAGTTATGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCGCAGGGTCCGCTGGCTaGCGCTCATGCAGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VCTFWNGLVYSFCGIDSSAGSAG*RSCSCH Trigger: GTGGCAGCTGCATGAGCGGCAGCCAGCGGACCCTGC...GGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGTACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | GTCAAGAAACAAACAACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCGAGTTGCTCGAGGTCTaGTTGGGGCCAGTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKKQTTHLDITRGHTHSAELLEV*LGPVKL Trigger: CAACTTCACTGGCCCCAACCAGACCTCGAGCAACTC...GGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTTGTTTGTTTCTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | GAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCCAATGTAGCGGTCAATaGAGATGGCACATAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELRSSGLAANTFTCSVSCQCSGQ*RWHIGS Trigger: TGAGCCTATGTGCCATCTCCATTGACCGCTACATTG...GCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | TTCAGTGTAGGATACTTGTGTACCTTGGAAGTTGTGATTAACCCAGGAGATCCACCAGTGGGCAGGTGCTaGTGTGTTGTGGCCGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVGYLCTLEVVINPGDPPVGRC*CVVAGV Trigger: GACACCGGCCACAACACATCAGCACCTGCCCACTGG...TGGATCTCCTGGGTTAATCACAACTTCCAAGGTACACAAGTATCCTACACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | ACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTGTGGCACCTGAATACCTCTCTGGTTGGGGCCAGTaGAGTTGGCATCTTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TPPRSPLVSTSVVAPEYLSGWGQ*SWHLST Trigger: AGTTGAAAGATGCCAACTTCACTGGCCCCAACCAGA...GAGGTATTCAGGTGCCACAACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | ATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTCGATGGCAAAGAGGATaGAGGCGCCCAGCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IVFVVLTPPRSPLVSTSVRWQRG*RRPAPG Trigger: GCCTGGTGCTGGGCGCCTTCATCCTCTTTGCCATCG...AACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGTCAATACCACAAAAACTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | GTCAAGAAACAAACAACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCTGGCCTTGGTACTGCTaGGGGTGTCCTCATGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VKKQTTHLDITRGHTHSAWPWYC*GCPHES Trigger: ACTTTCATGAGGACACCCTCAGCAGTACCAAGGCCA...GGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTTGTTTGTTTCTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | GTTTTCCGACCCTATCAAAGGGCCAGCATTGACTGGAGAGCAGGGAGGGGTTTGTCAGGGTCAGCTCTTTaGAGTTGGACATTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFRPYQRASIDWRAGRGLSGSAL*SWTFPS Trigger: TGAAGGAAATGTCCAACTCCAAAGAGCTGACCCTGA...CAAACCCCTCCCTGCTCTCCAGTCAATGCTGGCCCTTTGATAGGGTCGGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGGAGGCCCGATGGAGATaGCCGTGGACAAGACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TFWNGLVYSFCGIDSSKEEARWR*PWTRPT Trigger: TGTGGGTCTTGTCCACGGTCATCTCCATCGGGCCTC...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR GCA 90 bp | ATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTACCAGCGTGGGGTACTaGAGAGAGTATCGCACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVFVVLTPPRSPLVSTSVTSVGY*REYRTP Trigger: TGGGGTGCGATACTCTCTGCAGTACCCCACGCTGGT...AACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGTCAATACCACAAAAACTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGCCAGCTGGGGCAGTGTaGAGTTGCTCGAGGTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFWNGLVYSFCGIDSSKEPAGAV*SCSRSG Trigger: ACCAGACCTCGAGCAACTCCACACTGCCCCAGCTGG...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCCTGGTGACGTCCAGCTaGGGCAGTGTGGAGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCTFWNGLVYSFCGIDSSLVTSS*GSVELL Trigger: GAGCAACTCCACACTGCCCCAGCTGGACGTCACCAG...GGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGTACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR CAA 72 bp | AGTGGTATAATGCATGGGAGGAGGTCAGAGCATAACTaGCCAGAGTCCAGACTCTGCTTTACCTTGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGIMHGRRSEHN*PESRLCFTLCV Trigger: GACACACAAGGTAAAGCAGAGTCTGGACTCTGGCAAGTTATGCTCTGACCTCCTCCCATGCATTATACCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGAGAAGGGCAGGACTGTaGAGCTCAACAGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TFWNGLVYSFCGIDSSKERRAGL*SSTAGQ Trigger: CTGACCTGCTGTTGAGCTTCACAGTCCTGCCCTTCT...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR TCA 90 bp | ATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTCAAGTGGGAGAGCGATaGAGAAGGGGAGCCAACATA | + |
|
Preference number: 4 (lower is better) Translates to: IVFVVLTPPRSPLVSTSVQVGER*RRGANI Trigger: TATGTTGGCTCCCCTTCTTCATCGCTCTCCCACTTG...AACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGTCAATACCACAAAAACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAGATGTCACAGAAGATaGGCCCCAGCACCCAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCTFWNGLVYSFCGIDSSRCHRR*APAPSS Trigger: GCTACTGGGTGCTGGGGCGCATCTTCTGTGACATCT...GGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGTACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR GCA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTGCCGCTCATGCAGCTaGCACTGTCATCCAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TFWNGLVYSFCGIDSSKECRSCS*HCHPES Trigger: ACTCTCTGGATGACAGTGGCAGCTGCATGAGCGGCA...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTCTTGGTGGTCCTCTTaGCCACGATGTAGACTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFWNGLVYSFCGIDSSKESWWSS*PRCRLG Trigger: GCCGAGTCTACATCGTGGCCAAGAGGACCACCAAGA...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | CTAATTGTCTGCAAATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTCCAGATTCTTGGTaGTCCTCTTGGCCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LIVCKYVCVCVCVCVCVCPPDSW*SSWPRC Trigger: ACATCGTGGCCAAGAGGACCACCAAGAATCTGGAGG...ACACACACACACACACACACACACACACACACACACATATTTGCAGACAATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGCCTCCAGATTCTTGGTaGTCCTCTTGGCCACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TFWNGLVYSFCGIDSSKEPPDSW*SSWPRC Trigger: ACATCGTGGCCAAGAGGACCACCAAGAATCTGGAGG...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CCA 90 bp | ATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTCAATGTAGCGGTCAATaGAGATGGCACATAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IVFVVLTPPRSPLVSTSVQCSGQ*RWHIGS Trigger: TGAGCCTATGTGCCATCTCCATTGACCGCTACATTG...AACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGTCAATACCACAAAAACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| 3UTR CAA 72 bp | CTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATaGACTCCTCCAAGGAGTCCTCTGGTTTCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFGMALSIVFVV*TPPRSPLVSTS Trigger: AGATGTGGAAACCAGAGGACTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS CCA 90 bp | GAAGAGTGGCCCGGAGTCGAGGCGGCCGCGGCGGCCAGGAGGCTCTaGCAGGCTGAGCAGCGCTCCGGGTTTCCACTCGGGGAAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: EEWPGVEAAAAARRL*QAEQRSGFPLGEGA Trigger: TGCGCCTTCCCCGAGTGGAAACCCGGAGCGCTGCTCAGCCTGCCAGAGCCTCCTGGCCGCCGCGGCCGCCTCGACTCCGGGCCACTCTTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS TCA 90 bp | CTCCACGGGTGGCTGCGTTCCACGACCCAGGTATCCCGGGCTGGGTaGCGCCGAGGGCAGGGTCCGCTGGCTGCCGCTCATGCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LHGWLRSTTQVSRAG*RRGQGPLAAAHAAA Trigger: GGCAGCTGCATGAGCGGCAGCCAGCGGACCCTGCCCTCGGCGTCACCCAGCCCGGGATACCTGGGTCGTGGAACGCAGCCACCCGTGGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS CCA 90 bp | GGTCCCCGGGCTCTCAGGCTCGCCCAGGAGCTTGAAAGTGAAGAGTaGCCCGGAGTCGAGGCGGCCGCGGCGGCCAGGAGGCTCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPRALRLAQELESEE*PGVEAAAAARRLWQ Trigger: CTGCCAGAGCCTCCTGGCCGCCGCGGCCGCCTCGACTCCGGGCCACTCTTCACTTTCAAGCTCCTGGGCGAGCCTGAGAGCCCGGGGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS GCA 90 bp | GCTCCGGGTTTCCACTCGGGGAAGGCGCACAGCTCCACGGGTGGCTaGGTTCCACGACCCAGGTATCCCGGGCTGGGTGACGCCGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: APGFHSGKAHSSTGG*VPRPRYPGLGDAEG Trigger: GCCCTCGGCGTCACCCAGCCCGGGATACCTGGGTCGTGGAACGCAGCCACCCGTGGAGCTGTGCGCCTTCCCCGAGTGGAAACCCGGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS CCA 90 bp | ACAGCTCCACGGGTGGCTGCGTTCCACGACCCAGGTATCCCGGGCTaGGTGACGCCGAGGGCAGGGTCCGCTGGCTGCCGCTCATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TAPRVAAFHDPGIPG*VTPRAGSAGCRSCS Trigger: GCTGCATGAGCGGCAGCCAGCGGACCCTGCCCTCGGCGTCACCCAGCCCGGGATACCTGGGTCGTGGAACGCAGCCACCCGTGGAGCTGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS GCA 90 bp | CCAGGTATCCCGGGCTGGGTGACGCCGAGGGCAGGGTCCGCTGGCTaGCGCTCATGCAGCTGCCACTGTCATCCAGAGAGTCCTTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGIPGWVTPRAGSAG*RSCSCHCHPESPSA Trigger: CGCGGAAGGACTCTCTGGATGACAGTGGCAGCTGCATGAGCGGCAGCCAGCGGACCCTGCCCTCGGCGTCACCCAGCCCGGGATACCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS CCA 90 bp | CGACCCAGGTATCCCGGGCTGGGTGACGCCGAGGGCAGGGTCCGCTaGCTGCCGCTCATGCAGCTGCCACTGTCATCCAGAGAGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPRYPGLGDAEGRVR*LPLMQLPLSSRESF Trigger: GAAGGACTCTCTGGATGACAGTGGCAGCTGCATGAGCGGCAGCCAGCGGACCCTGCCCTCGGCGTCACCCAGCCCGGGATACCTGGGTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS GCA 90 bp | TGGGTGACGCCGAGGGCAGGGTCCGCTGGCTGCCGCTCATGCAGCTaGCACTGTCATCCAGAGAGTCCTTCCGCGACTGCGACCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WVTPRAGSAGCRSCS*HCHPESPSATATSP Trigger: TGGAGAGGTCGCAGTCGCGGAAGGACTCTCTGGATGACAGTGGCAGCTGCATGAGCGGCAGCCAGCGGACCCTGCCCTCGGCGTCACCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | AGACATCACCAGGGGTCACACTCACTCTGCCCCAGCACATGCTTGCGGGCAGGCGTCCGCAGGTGCCGGTaGCAGGCCACCGACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RHHQGSHSLCPSTCLRAGVRRCR*QATDRM Trigger: CATCCTGTCGGTGGCCTGCAACCGGCACCTGCGGAC...GCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | TCAGCATGCTCAGCCCAGCTCTTCGCTGTACCTGGCACCCATGCCTCTGCCAGAGTCCGCAGGTGCCGGTaGCAGGCCACCGACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SACSAQLFAVPGTHASARVRRCR*QATDRM Trigger: CATCCTGTCGGTGGCCTGCAACCGGCACCTGCGGAC...TCTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGCTGGGCTGAGCATGCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | AGACATCACCAGGGGTCACACTCACTCTGCCCCAGCACATGCTTGCGGGCAGGCGGCTCGCCCAGGAGCTaGAAAGTGAAGAGTGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RHHQGSHSLCPSTCLRAGGSPRS*KVKSGP Trigger: CGGGCCACTCTTCACTTTCAAGCTCCTGGGCGAGCC...GCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | ATGCTCAGCCCAGCTCTTCGCTGTACCTGGCACCCATGCCTCTGCCAGAAAAGCGTGTCGCAGCCCCCATaGCTGGCGTCGCCTTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MLSPALRCTWHPCLCQKSVSQPP*LASPSV Trigger: GACCGAAGGCGACGCCAGCAATGGGGGCTGCGACAC...GCTTTTCTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGCTGGGCTGAGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | AGACATCACCAGGGGTCACACTCACTCTGCCCCAGCACATGCTTGCGGGCAGGCGCAGGTGCTGATGTGTaGTGGCCGGTGTCCAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RHHQGSHSLCPSTCLRAGAGADV*WPVSRS Trigger: CGATCTGGACACCGGCCACAACACATCAGCACCTGC...GCCTGCCCGCAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | CCTCCCCTTTGTCCCCTTGAGACCTTGTGTCTACTCAGGACTGACACACTCCCCGTGTCGCAGCCCCCATaGCTGGCGTCGCCTTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PPLCPLETLCLLRTDTLPVSQPP*LASPSV Trigger: GACCGAAGGCGACGCCAGCAATGGGGGCTGCGACAC...GGGGAGTGTGTCAGTCCTGAGTAGACACAAGGTCTCAAGGGGACAAAGGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCCCTTTGTCCCCTTGAGACCTTGTGTCTACTCAGGACTGACACACTCCCCGGCGCCAGGGGCATGTaGCTCTTGAAGCCCGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPLCPLETLCLLRTDTLPGARGM*LLKPGC Trigger: GCAGCCGGGCTTCAAGAGCAACATGCCCCTGGCGCC...GGGGAGTGTGTCAGTCCTGAGTAGACACAAGGTCTCAAGGGGACAAAGGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | GCACCCACGCAGCCCACACGTACACCAAACAGACACACGCACGTGTACCCACAGGCAGGTGCTGATGTGTaGTGGCCGGTGTCCAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: APTQPTRTPNRHTHVYPQAGADV*WPVSRS Trigger: CGATCTGGACACCGGCCACAACACATCAGCACCTGC...CTGTGGGTACACGTGCGTGTGTCTGTTTGGTGTACGTGTGGGCTGCGTGGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCCTGGGGCAGTGTGGAGTaGCTCGAGGTCTGGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVLRLGSEHLYLLSVLLAWGSVE*LEVWLG Trigger: CCCCAACCAGACCTCGAGCAACTCCACACTGCCCCA...GGCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCAAGCCCGGCTGCCCGTaGGCCAGGTCAGTTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPQAWQRTPLPAQCLAGKPGCP*ARSVVV Trigger: CACCACAACTGACCTGGCCAACGGGCAGCCGGGCTT...GCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | GATCGAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCGGCGCCAGGGGCATGTaGCTCTTGAAGCCCGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DRTQVLRLGSEHLYLLSVGARGM*LLKPGC Trigger: GCAGCCGGGCTTCAAGAGCAACATGCCCCTGGCGCC...GACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | ATGCTCAGCCCAGCTCTTCGCTGTACCTGGCACCCATGCCTCTGCCAGAAAAGCAGCCAGAACACTACCTaGAATACGGCGTCCGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MLSPALRCTWHPCLCQKSSQNTT*NTASGG Trigger: GCCCCCGGACGCCGTATTCAAGGTAGTGTTCTGGCT...GCTTTTCTGGCAGAGGCATGGGTGCCAGGTACAGCGAAGAGCTGGGCTGAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | AACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCCCAGCACATGCTTGAAGCCCGGCTGCCCGTaGGCCAGGTCAGTTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTPRHHQGSHSLCPSTCLKPGCP*ARSVVV Trigger: CACCACAACTGACCTGGCCAACGGGCAGCCGGGCTT...CAAGCATGTGCTGGGGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTGGCTTGTGGCCCTTGGCCTaGGTACTGCTGAGGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGPQAWQRTPLPAQCLAGLWPLA*VLLRVS Trigger: GGACACCCTCAGCAGTACCAAGGCCAAGGGCCACAA...GCCAGCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | GAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCCTGGGGTTGTGGCCCTaGGCCTTGGTACTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELRSSGLAANTFTCSVSCLGLWP*ALVLLR Trigger: CCTCAGCAGTACCAAGGCCAAGGGCCACAACCCCAG...GCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | GATCGAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCGGCTCGCCCAGGAGCTaGAAAGTGAAGAGTGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: DRTQVLRLGSEHLYLLSVGSPRS*KVKSGP Trigger: CGGGCCACTCTTCACTTTCAAGCTCCTGGGCGAGCC...GACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTCGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS CCA 90 bp | GTCTGGTTGGGGCCAGTGAAGTTGGCATCTTTCAACTCTCCCCAGTaGGCAGGTGCTGATGTGTTGTGGCCGGTGTCCAGATCGGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: VWLGPVKLASFNSPQ*AGADVLWPVSRSGF Trigger: GAATCCCGATCTGGACACCGGCCACAACACATCAGCACCTGCCCACTGGGGAGAGTTGAAAGATGCCAACTTCACTGGCCCCAACCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | GTTTTCCGACCCTATCAAAGGGCCAGCATTGACTGGAGAGCAGGGAGGGGTTTGTTGTGGCCCTTGGCCTaGGTACTGCTGAGGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VFRPYQRASIDWRAGRGLLWPLA*VLLRVS Trigger: GGACACCCTCAGCAGTACCAAGGCCAAGGGCCACAA...CAAACCCCTCCCTGCTCTCCAGTCAATGCTGGCCCTTTGATAGGGTCGGAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | GAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCCGCATGAAGGCGCGTTaGAACTCCTTGCTGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ELRSSGLAANTFTCSVSCRMKAR*NSLLEH Trigger: GTGCTCCAGCAAGGAGTTCAAACGCGCCTTCATGCG...GCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | GTCAAGAAACAAACAACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCCCCGCCTCCAGATTCTaGGTGGTCCTCTTGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: VKKQTTHLDITRGHTHSAPASRF*VVLLAT Trigger: CGTGGCCAAGAGGACCACCAAGAATCTGGAGGCGGG...GGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTTGTTTGTTTCTTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | CTTGTGTGTGTGTACAAGCCCAGTGGTATAATGCATGGGAGGAGGTCAGAGCATCTGGGGTTGTGGCCCTaGGCCTTGGTACTGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVCVYKPSGIMHGRRSEHLGLWP*ALVLLR Trigger: CCTCAGCAGTACCAAGGCCAAGGGCCACAACCCCAG...ATGCTCTGACCTCCTCCCATGCATTATACCACTGGGCTTGTACACACACACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | GAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCTTGGGGCCAGTGAAGTaGGCATCTTTCAACTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ELRSSGLAANTFTCSVSCLGPVK*ASFNSP Trigger: GGGAGAGTTGAAAGATGCCAACTTCACTGGCCCCAA...GCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS TCA 90 bp | AGAAGGAGCCCAGGGAGGAAAAGAGGGCGTAGAAGGGTTCTTCTGTaGCCCCACATTCTTTGTCGTCATTGGGCGCAGGTTCTTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RRSPGRKRGRRRVLL*PHILCRHWAQVLSI Trigger: GATGGAAAGAACCTGCGCCCAATGACGACAAAGAATGTGGGGTCACAGAAGAACCCTTCTACGCCCTCTTTTCCTCCCTGGGCTCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGTCCAGACTCTGCTTTACCTTGTGTGTCCCAGAGATCGAACTCAGGTCTTGGGGCCAGTGAAGTaGGCATCTTTCAACTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARVQTLLYLVCPRDRTQVLGPVK*ASFNSP Trigger: GGGAGAGTTGAAAGATGCCAACTTCACTGGCCCCAA...GACCTGAGTTCGATCTCTGGGACACACAAGGTAAAGCAGAGTCTGGACTCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | CTTGTGTGTGTGTACAAGCCCAGTGGTATAATGCATGGGAGGAGGTCAGAGCATCGCATGAAGGCGCGTTaGAACTCCTTGCTGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVCVYKPSGIMHGRRSEHRMKAR*NSLLEH Trigger: GTGCTCCAGCAAGGAGTTCAAACGCGCCTTCATGCG...ATGCTCTGACCTCCTCCCATGCATTATACCACTGGGCTTGTACACACACACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | ATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTCCCGCCTCCAGATTCTaGGTGGTCCTCTTGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: IVFVVLTPPRSPLVSTSVPASRF*VVLLAT Trigger: CGTGGCCAAGAGGACCACCAAGAATCTGGAGGCGGG...AACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGTCAATACCACAAAAACTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS-3UTR CAA 90 bp | GAACTCAGGTCCTCAGGCTTGGCAGCGAACACCTTTACCTGCTCAGTGTCTTGCGTCAGCTCTTTGGAGTaGGACATTTCCTTCATGACT | + |
|
Preference number: 5 (lower is better) Translates to: ELRSSGLAANTFTCSVSCVSSLE*DISFMT Trigger: AGTCATGAAGGAAATGTCCAACTCCAAAGAGCTGAC...GCAAGACACTGAGCAGGTAAAGGTGTTCGCTGCCAAGCCTGAGGACCTGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | ACTCCTCCAAGGAGTCCTCTGGTTTCCACATCTGTTGTGGCACCTGAATACCTCCTCAGGGTCAGCTCTTaGGAGTTGGACATTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPPRSPLVSTSVVAPEYLLRVSS*ELDISF Trigger: GAAGGAAATGTCCAACTCCAAAGAGCTGACCCTGAG...GAGGTATTCAGGTGCCACAACAGATGTGGAAACCAGAGGACTCCTTGGAGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTGGGGCAGTGTGGAGTaGCTCGAGGTCTGGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TFWNGLVYSFCGIDSSKEWGSVE*LEVWLG Trigger: CCCCAACCAGACCTCGAGCAACTCCACACTGCCCCA...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | GTCAAGAAACAAACAACACACCTAGACATCACCAGGGGTCACACTCACTCTGCCCTCAGGGTCAGCTCTTaGGAGTTGGACATTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VKKQTTHLDITRGHTHSALRVSS*ELDISF Trigger: GAAGGAAATGTCCAACTCCAAAGAGCTGACCCTGAG...GGCAGAGTGAGTGTGACCCCTGGTGATGTCTAGGTGTGTTGTTTGTTTCTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | AAAAACATTGCTATTACATTGTGTGTGTGCTTGTGTGTGTGTACAAGCCCAGTGAGCCAGAACACTACCTaGAATACGGCGTCCGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KNIAITLCVCLCVCTSPVSQNTT*NTASGG Trigger: GCCCCCGGACGCCGTATTCAAGGTAGTGTTCTGGCT...CACTGGGCTTGTACACACACACAAGCACACACACAATGTAATAGCAATGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGTTGCTCGAGGTCTGGTaGGGGCCAGTGAAGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TFWNGLVYSFCGIDSSKELLEVW*GPVKLA Trigger: TGCCAACTTCACTGGCCCCAACCAGACCTCGAGCAA...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAGGATGACCAAGATGTaGCCCACGATGGCAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCTFWNGLVYSFCGIDSSRMTKM*PTMAKR Trigger: CCTCTTTGCCATCGTGGGCAACATCTTGGTCATCCT...GGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGTACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | ACTTTTTGGAATGGCCTTGTCTATAGTTTTTGTGGTATTGACTCCTCCAAGGAGAGGATGACCAAGATGTaGCCCACGATGGCAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TFWNGLVYSFCGIDSSKERMTKM*PTMAKR Trigger: CCTCTTTGCCATCGTGGGCAACATCTTGGTCATCCT...CTCCTTGGAGGAGTCAATACCACAAAAACTATAGACAAGGCCATTCCAAAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS-3UTR CAA 90 bp | TTCAGTGTAGGATACTTGTGTACCTTGGAAGTTGTGATTAACCCAGGAGATCCAGTCAGCTCTTTGGAGTaGGACATTTCCTTCATGACT | + |
|
Preference number: 5 (lower is better) Translates to: FSVGYLCTLEVVINPGDPVSSLE*DISFMT Trigger: AGTCATGAAGGAAATGTCCAACTCCAAAGAGCTGAC...TGGATCTCCTGGGTTAATCACAACTTCCAAGGTACACAAGTATCCTACACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS CCA 72 bp | CCCGGAGTCGAGGCGGCCGCGGCGGCCAGGAGGCTCTaGCAGGCTGAGCAGCGCTCCGGGTTTCCACTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGVEAAAAARRL*QAEQRSGFPLG Trigger: CCCGAGTGGAAACCCGGAGCGCTGCTCAGCCTGCCAGAGCCTCCTGGCCGCCGCGGCCGCCTCGACTCCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS CCA 72 bp | CGGGTGGCTGCGTTCCACGACCCAGGTATCCCGGGCTaGGTGACGCCGAGGGCAGGGTCCGCTGGCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RVAAFHDPGIPG*VTPRAGSAGCR Trigger: GCGGCAGCCAGCGGACCCTGCCCTCGGCGTCACCCAGCCCGGGATACCTGGGTCGTGGAACGCAGCCACCCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS TCA 72 bp | TGGCTGCGTTCCACGACCCAGGTATCCCGGGCTGGGTaGCGCCGAGGGCAGGGTCCGCTGGCTGCCGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WLRSTTQVSRAG*RRGQGPLAAAH Trigger: ATGAGCGGCAGCCAGCGGACCCTGCCCTCGGCGTCACCCAGCCCGGGATACCTGGGTCGTGGAACGCAGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS CCA 72 bp | GCTCTCAGGCTCGCCCAGGAGCTTGAAAGTGAAGAGTaGCCCGGAGTCGAGGCGGCCGCGGCGGCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALRLAQELESEE*PGVEAAAAARR Trigger: CCTCCTGGCCGCCGCGGCCGCCTCGACTCCGGGCCACTCTTCACTTTCAAGCTCCTGGGCGAGCCTGAGAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS GCA 72 bp | CAGCTGCCACTGTCATCCAGAGAGTCCTTCCGCGACTaGGACCTCTCCAGCGAGCCGCCGCGGGTCCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: QLPLSSRESFRD*DLSSEPPRVHG Trigger: GCCGTGGACCCGCGGCGGCTCGCTGGAGAGGTCGCAGTCGCGGAAGGACTCTCTGGATGACAGTGGCAGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS GCA 72 bp | CCGGGCGCCAGGGGCATGTTGCTCTTGAAGCCCGGCTaGCCGTTGGCCAGGTCAGTTGTGGTGTCGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGARGMLLLKPG*PLARSVVVSQP Trigger: GGGCTGCGACACCACAACTGACCTGGCCAACGGGCAGCCGGGCTTCAAGAGCAACATGCCCCTGGCGCCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
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| CDS CCA 72 bp | GGGTTTCCACTCGGGGAAGGCGCACAGCTCCACGGGTaGCTGCGTTCCACGACCCAGGTATCCCGGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GFPLGEGAQLHG*LRSTTQVSRAG Trigger: CCCAGCCCGGGATACCTGGGTCGTGGAACGCAGCCACCCGTGGAGCTGTGCGCCTTCCCCGAGTGGAAACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS CAA 72 bp | CCTTCGGTCCCCGGGCTCTCAGGCTCGCCCAGGAGCTaGAAAGTGAAGAGTGGCCCGGAGTCGAGGCGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PSVPGLSGSPRS*KVKSGPESRRP Trigger: CGGCCGCCTCGACTCCGGGCCACTCTTCACTTTCAAGCTCCTGGGCGAGCCTGAGAGCCCGGGGACCGAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067258.9 ENSMUST00000167574.2 |
||
| CDS TCA 72 bp | AGGCGCCCAGCACCAGGCCCACAGAGATGGCCCTGGTaGCGTCCAGCTGGGGCAGTGTGGAGTTGCTCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRPAPGPQRWPW*RPAGAVWSCSR Trigger: CCTCGAGCAACTCCACACTGCCCCAGCTGGACGTCACCAGGGCCATCTCTGTGGGCCTGGTGCTGGGCGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS GCA 72 bp | CCGAGGGCAGGGTCCGCTGGCTGCCGCTCATGCAGCTaGCACTGTCATCCAGAGAGTCCTTCCGCGACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PRAGSAGCRSCS*HCHPESPSATA Trigger: CGCAGTCGCGGAAGGACTCTCTGGATGACAGTGGCAGCTGCATGAGCGGCAGCCAGCGGACCCTGCCCTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS GCA 72 bp | TTCCACTCGGGGAAGGCGCACAGCTCCACGGGTGGCTaGGTTCCACGACCCAGGTATCCCGGGCTGGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FHSGKAHSSTGG*VPRPRYPGLGD Trigger: GTCACCCAGCCCGGGATACCTGGGTCGTGGAACGCAGCCACCCGTGGAGCTGTGCGCCTTCCCCGAGTGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS CCA 72 bp | TATCCCGGGCTGGGTGACGCCGAGGGCAGGGTCCGCTaGCTGCCGCTCATGCAGCTGCCACTGTCATCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: YPGLGDAEGRVR*LPLMQLPLSSR Trigger: TCTGGATGACAGTGGCAGCTGCATGAGCGGCAGCCAGCGGACCCTGCCCTCGGCGTCACCCAGCCCGGGATA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS GCA 72 bp | ACAGGACATCAACCGCTGCCCAGATGTCACAGAAGATaGGCCCCAGCACCCAGTAGCCGAGCACTTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGHQPLPRCHRR*APAPSSRALPG Trigger: CCCTGGAAGTGCTCGGCTACTGGGTGCTGGGGCGCATCTTCTGTGACATCTGGGCAGCGGTTGATGTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS TCA 72 bp | GCAGTGTGGAGTTGCTCGAGGTCTGGTTGGGGCCAGTaGAGTTGGCATCTTTCAACTCTCCCCAGTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVWSCSRSGWGQ*SWHLSTLPSGQ Trigger: CTGCCCACTGGGGAGAGTTGAAAGATGCCAACTTCACTGGCCCCAACCAGACCTCGAGCAACTCCACACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS CCA 72 bp | GGGCCAGTGAAGTTGGCATCTTTCAACTCTCCCCAGTaGGCAGGTGCTGATGTGTTGTGGCCGGTGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPVKLASFNSPQ*AGADVLWPVSR Trigger: TCTGGACACCGGCCACAACACATCAGCACCTGCCCACTGGGGAGAGTTGAAAGATGCCAACTTCACTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS CAA 72 bp | GTGGAGTTGCTCGAGGTCTGGTTGGGGCCAGTGAAGTaGGCATCTTTCAACTCTCCCCAGTGGGCAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VELLEVWLGPVK*ASFNSPQWAGA Trigger: AGCACCTGCCCACTGGGGAGAGTTGAAAGATGCCAACTTCACTGGCCCCAACCAGACCTCGAGCAACTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS TCA 72 bp | GTTGGCATCTTTCAACTCTCCCCAGTGGGCAGGTGCTaGTGTGTTGTGGCCGGTGTCCAGATCGGGATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VGIFQLSPVGRC*CVVAGVQIGIH Trigger: ATGAATCCCGATCTGGACACCGGCCACAACACATCAGCACCTGCCCACTGGGGAGAGTTGAAAGATGCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS TCA 72 bp | CCAGGGAGGAAAAGAGGGCGTAGAAGGGTTCTTCTGTaGCCCCACATTCTTTGTCGTCATTGGGCGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PGRKRGRRRVLL*PHILCRHWAQV Trigger: AACCTGCGCCCAATGACGACAAAGAATGTGGGGTCACAGAAGAACCCTTCTACGCCCTCTTTTCCTCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS CAA 72 bp | AAGGGTTCTTCTGTGACCCCACATTCTTTGTCGTCATaGGGCGCAGGTTCTTTCCATCCAAGGAGAGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: KGSSVTPHSLSS*GAGSFHPRRGP Trigger: CGGGCCTCTCCTTGGATGGAAAGAACCTGCGCCCAATGACGACAAAGAATGTGGGGTCACAGAAGAACCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
||
| CDS TCA 72 bp | TCAGGGTCAGCTCTTTGGAGTTGGACATTTCCTTCATaGCTCCCGCCTCCAGATTCTTGGTGGTCCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGSALWSWTFPS*LPPPDSWWSSW Trigger: CCAAGAGGACCACCAAGAATCTGGAGGCGGGAGTCATGAAGGAAATGTCCAACTCCAAAGAGCTGACCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS CCA 72 bp | TTAAAAAGTTTGACAGCTATGGAACTCCTGGGGTTGTaGCCCTTGGCCTTGGTACTGCTGAGGGTGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LKSLTAMELLGL*PLALVLLRVSS Trigger: TGAGGACACCCTCAGCAGTACCAAGGCCAAGGGCCACAACCCCAGGAGTTCCATAGCTGTCAAACTTTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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| CDS CAA 72 bp | AACTTAAAAAGTTTGACAGCTATGGAACTCCTGGGGTaGTGGCCCTTGGCCTTGGTACTGCTGAGGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: NLKSLTAMELLG*WPLALVLLRVS Trigger: GGACACCCTCAGCAGTACCAAGGCCAAGGGCCACAACCCCAGGAGTTCCATAGCTGTCAAACTTTTTAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067258.9 ENSMUST00000139906.2 ENSMUST00000167574.2 |
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