Pregenerated sensors for ADPRS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042558Ensembl transcript IDs: ENSMUST00000102617.5
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGCTGGGCTGAATGCCGGTCTCAGGAGCCAAACAGCCTGCTGCTaGCTCCGCCCACTCAGCACTAGGCTGTCACACTGGCTAGAACCC | + |
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Preference number: 1 (lower is better) Translates to: VAGLNAGLRSQTACC*LRPLSTRLSHWLEP Trigger: GGGTTCTAGCCAGTGTGACAGCCTAGTGCTGAGTGGGCGGAGCCAGCAGCAGGCTGTTTGGCTCCTGAGACCGGCATTCAGCCCAGCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR CCA 90 bp | ACAGCCTGCTGCTGGCTCCGCCCACTCAGCACTAGGCTGTCACACTaGCTAGAACCCAACCGGGAGATAGGATCCTCCCAGAGGTCATTC | + |
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Preference number: 1 (lower is better) Translates to: TACCWLRPLSTRLSH*LEPNREIGSSQRSF Trigger: GAATGACCTCTGGGAGGATCCTATCTCCCGGTTGGGTTCTAGCCAGTGTGACAGCCTAGTGCTGAGTGGGCGGAGCCAGCAGCAGGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR TCA 90 bp | ATCCTCCCAGAGGTCATTCCACCTTCCCAAGTTCCATGTCCTGGATaGCAAAGAGTGCCACCCATACCCCTCCAAAACAAGACCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: ILPEVIPPSQVPCPG*QRVPPIPLQNKTCP Trigger: AGGGCAGGTCTTGTTTTGGAGGGGTATGGGTGGCACTCTTTGTCATCCAGGACATGGAACTTGGGAAGGTGGAATGACCTCTGGGAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR GCA 72 bp | GGGCTGAATGCCGGTCTCAGGAGCCAAACAGCCTGCTaGTGGCTCCGCCCACTCAGCACTAGGCTGTCACAC | + |
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Preference number: 3 (lower is better) Translates to: GLNAGLRSQTAC*WLRPLSTRLSH Trigger: GTGTGACAGCCTAGTGCTGAGTGGGCGGAGCCAGCAGCAGGCTGTTTGGCTCCTGAGACCGGCATTCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR GCA 72 bp | GCTGGGCTGAATGCCGGTCTCAGGAGCCAAACAGCCTaGTGCTGGCTCCGCCCACTCAGCACTAGGCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: AGLNAGLRSQTA*CWLRPLSTRLS Trigger: TGACAGCCTAGTGCTGAGTGGGCGGAGCCAGCAGCAGGCTGTTTGGCTCCTGAGACCGGCATTCAGCCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR CCA 72 bp | CTGAATGCCGGTCTCAGGAGCCAAACAGCCTGCTGCTaGCTCCGCCCACTCAGCACTAGGCTGTCACACTGG | + |
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Preference number: 3 (lower is better) Translates to: LNAGLRSQTACC*LRPLSTRLSHW Trigger: CCAGTGTGACAGCCTAGTGCTGAGTGGGCGGAGCCAGCAGCAGGCTGTTTGGCTCCTGAGACCGGCATTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR CCA 72 bp | TGCTGGCTCCGCCCACTCAGCACTAGGCTGTCACACTaGCTAGAACCCAACCGGGAGATAGGATCCTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: CWLRPLSTRLSH*LEPNREIGSSQ Trigger: CTGGGAGGATCCTATCTCCCGGTTGGGTTCTAGCCAGTGTGACAGCCTAGTGCTGAGTGGGCGGAGCCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR-3UTR CAA 90 bp | GCCCCAAGAAGGCACCAGCTCCTCTCTGTTCCACAGGCTGTCTCAAGATTCCAGGTCTTCCCTCTAGGATaGAGGGCAGGTGCGGCAACC | + |
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Preference number: 3 (lower is better) Translates to: APRRHQLLSVPQAVSRFQVFPLG*RAGAAT Trigger: GGTTGCCGCACCTGCCCTCAATCCTAGAGGGAAGAC...CTGGAATCTTGAGACAGCCTGTGGAACAGAGAGGAGCTGGTGCCTTCTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR TCA 72 bp | CTCCAAAACAAGACCTGCCCTGGCCCCTCATATTTCTaGGGACCCTGGGTGTCATACAGCCCTGCAGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: LQNKTCPGPSYF*GPWVSYSPAAS Trigger: GCTTGCTGCAGGGCTGTATGACACCCAGGGTCCTCAGAAATATGAGGGGCCAGGGCAGGTCTTGTTTTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR-3UTR CAA 90 bp | AAACAAGACCTGCCCTGGCCCCTCATATTTCTGAGGACCCTGGGTGTCATACAGGGAGTCCAATCTGAGTaGTCCTTGGTCCTGATGGGT | + |
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Preference number: 3 (lower is better) Translates to: KQDLPWPLIFLRTLGVIQGVQSE*SLVLMG Trigger: ACCCATCAGGACCAAGGACAACTCAGATTGGACTCC...CTGTATGACACCCAGGGTCCTCAGAAATATGAGGGGCCAGGGCAGGTCTTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR CCA 72 bp | CCCAGAGGTCATTCCACCTTCCCAAGTTCCATGTCCTaGATGACAAAGAGTGCCACCCATACCCCTCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: PRGHSTFPSSMS*MTKSATHTPPK Trigger: TTTTGGAGGGGTATGGGTGGCACTCTTTGTCATCCAGGACATGGAACTTGGGAAGGTGGAATGACCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| 3UTR TCA 72 bp | GAGGTCATTCCACCTTCCCAAGTTCCATGTCCTGGATaGCAAAGAGTGCCACCCATACCCCTCCAAAACAAG | + |
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Preference number: 3 (lower is better) Translates to: EVIPPSQVPCPG*QRVPPIPLQNK Trigger: CTTGTTTTGGAGGGGTATGGGTGGCACTCTTTGTCATCCAGGACATGGAACTTGGGAAGGTGGAATGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | TGGGCTGAATGCCGGTCTCAGGAGCCAAACAGCCTGCTGCTGGCTCCGCCCACTGAGGCGTGGGTCAGCTaGGCCGAGAGCCGGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: WAECRSQEPNSLLLAPPTEAWVS*AESRAN Trigger: GTTTGCCCGGCTCTCGGCCCAGCTGACCCACGCCTC...AGTGGGCGGAGCCAGCAGCAGGCTGTTTGGCTCCTGAGACCGGCATTCAGCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | GGCCGGGCCAGGCAGCCAGTGGCTGGGCTGAATGCCGGTCTCAGGAGCCAAACAACTCGGTGCAGGCTCTaGGCCAGGACGTCTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRARQPVAGLNAGLRSQTTRCRL*ARTSVS Trigger: GGAGACAGACGTCCTGGCCCAGAGCCTGCACCGAGT...TGTTTGGCTCCTGAGACCGGCATTCAGCCCAGCCACTGGCTGCCTGGCCCGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR GCA 90 bp | GTCATACAGCCCTGCAGCAAGCCAGAGCTGCAGCCCCAAGAAGGCACCAGCTCCCGACATCGCTGTAGCTaGTGCCGCCGCAGCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: VIQPCSKPELQPQEGTSSRHRCS*CRRSHR Trigger: GCGGTGGCTGCGGCGGCAGCAGCTACAGCGATGTCG...GGAGCTGGTGCCTTCTTGGGGCTGCAGCTCTGGCTTGCTGCAGGGCTGTATGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR GCA 90 bp | GCCAGTGGCTGGGCTGAATGCCGGTCTCAGGAGCCAAACAGCCTGCTGCTGGCTCCCTGCAGAGCAAGGTaGACAGCCAGGGCCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: ASGWAECRSQEPNSLLLAPCRAR*TARACK Trigger: CTTGCAGGCCCTGGCTGTGCACCTTGCTCTGCAGGG...AGCCAGCAGCAGGCTGTTTGGCTCCTGAGACCGGCATTCAGCCCAGCCACTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTGAATGCCGGTCTCAGGAGCCAAACAGCCTGCTGCTGGCTCCGCCCACTTCCTGGAAGACTCGGTaGAGGCTCTGGGCCAGGACG | + |
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Preference number: 4 (lower is better) Translates to: WAECRSQEPNSLLLAPPTSWKTR*RLWART Trigger: CGTCCTGGCCCAGAGCCTGCACCGAGTCTTCCAGGA...AGTGGGCGGAGCCAGCAGCAGGCTGTTTGGCTCCTGAGACCGGCATTCAGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | GGCCGGGCCAGGCAGCCAGTGGCTGGGCTGAATGCCGGTCTCAGGAGCCAAACATCCAGCTCCTCCATGTaGCCCAGAAGCTGCTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: GRARQPVAGLNAGLRSQTSSSSM*PRSCSR Trigger: CCTTGAGCAGCTTCTGGGCCACATGGAGGAGCTGGA...TGTTTGGCTCCTGAGACCGGCATTCAGCCCAGCCACTGGCTGCCTGGCCCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR GCA 90 bp | GAAGGCACCAGCTCCTCTCTGTTCCACAGGCTGTCTCAAGATTCCAGCCCCAAGGGCCAGCGAGATGCCTaGTACCCGCATGGCACCCCC | + |
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Preference number: 4 (lower is better) Translates to: EGTSSSLFHRLSQDSSPKGQRDA*YPHGTP Trigger: GGGGGTGCCATGCGGGTAGCAGGCATCTCGCTGGCC...CTTGGGGCTGGAATCTTGAGACAGCCTGTGGAACAGAGAGGAGCTGGTGCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTGAATGCCGGTCTCAGGAGCCAAACAGCCTGCTGCTGGCTCCGCCCACTCGACCTTCTTCAGCCTaGTGGAGTACGGACGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WAECRSQEPNSLLLAPPTRPSSA*WSTDAP Trigger: AGGAGCGTCCGTACTCCAGCAGGCTGAAGAAGGTCG...AGTGGGCGGAGCCAGCAGCAGGCTGTTTGGCTCCTGAGACCGGCATTCAGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | GCCAGTGGCTGGGCTGAATGCCGGTCTCAGGAGCCAAACAGCCTGCTGCTGGCTCCTTCTTCAGCCTGCTaGAGTACGGACGCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ASGWAECRSQEPNSLLLAPSSAC*STDAPP Trigger: TGGAGGAGCGTCCGTACTCCAGCAGGCTGAAGAAGG...AGCCAGCAGCAGGCTGTTTGGCTCCTGAGACCGGCATTCAGCCCAGCCACTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR TCA 90 bp | CAGCCCCAAGAAGGCACCAGCTCCTCTCTGTTCCACAGGCTGTCTCAAGATTCCAGGAACCCTTCCCGTTaGACTGGGCCCGGGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QPQEGTSSSLFHRLSQDSRNPSR*TGPGQA Trigger: AGCCTGCCCGGGCCCAGTTCAACGGGAAGGGTTCCT...GGAATCTTGAGACAGCCTGTGGAACAGAGAGGAGCTGGTGCCTTCTTGGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR TCA 90 bp | GAAGGCACCAGCTCCTCTCTGTTCCACAGGCTGTCTCAAGATTCCAGCCCCAAGGAGGGGATCTCAGGGTaGGGCTCCATGCAGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: EGTSSSLFHRLSQDSSPKEGISG*GSMQRR Trigger: CCTGCGCTGCATGGAGCCTCACCCTGAGATCCCCTC...CTTGGGGCTGGAATCTTGAGACAGCCTGTGGAACAGAGAGGAGCTGGTGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR GCA 90 bp | TGTCATACAGCCCTGCAGCAAGCCAGAGCTGCAGCCCCAAGAAGGCACCAGCTCCAGGGTGAGGCTCCATaGAGCGCAGGAAGCAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: CHTALQQARAAAPRRHQLQGEAP*SAGSSR Trigger: TCTACTGCTTCCTGCGCTGCATGGAGCCTCACCCTG...GAGCTGGTGCCTTCTTGGGGCTGCAGCTCTGGCTTGCTGCAGGGCTGTATGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | AAACAAGACCTGCCCTGGCCCCTCATATTTCTGAGGACCCTGGGTGTCATACAGCTCGGAAGCGCGAGATaGAGCGGGCCGCACTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: KQDLPWPLIFLRTLGVIQLGSAR*SGPHLP Trigger: GGGCAAGTGCGGCCCGCTCCATCTCGCGCTTCCGAG...CTGTATGACACCCAGGGTCCTCAGAAATATGAGGGGCCAGGGCAGGTCTTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | AAACAAGACCTGCCCTGGCCCCTCATATTTCTGAGGACCCTGGGTGTCATACAGCCCAGGGAAGAGGCGTaGGTCAGCTGGGCCGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: KQDLPWPLIFLRTLGVIQPREEA*VSWAES Trigger: GCTCTCGGCCCAGCTGACCCACGCCTCTTCCCTGGG...CTGTATGACACCCAGGGTCCTCAGAAATATGAGGGGCCAGGGCAGGTCTTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | CTGGCCCCTCATATTTCTGAGGACCCTGGGTGTCATACAGCCCTGCAGCAAGCCCCAGGGCCTGCAAGATaGCACCGTTATAGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LAPHISEDPGCHTALQQAPGPAR*HRYSPG Trigger: CCCTGGGCTATAACGGTGCCATCTTGCAGGCCCTGG...GGCTTGCTGCAGGGCTGTATGACACCCAGGGTCCTCAGAAATATGAGGGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | TGTCATACAGCCCTGCAGCAAGCCAGAGCTGCAGCCCCAAGAAGGCACCAGCTCGCGTCCAAGACCGATTaGGCATCACCTTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: CHTALQQARAAAPRRHQLASKTD*ASPSSS Trigger: GGAGCTGGAAGGTGATGCCCAATCGGTCTTGGACGC...GAGCTGGTGCCTTCTTGGGGCTGCAGCTCTGGCTTGCTGCAGGGCTGTATGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | TGTCATACAGCCCTGCAGCAAGCCAGAGCTGCAGCCCCAAGAAGGCACCAGCTCAGCAGTAGATGGCGGTaGGCACAGATTCAAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: CHTALQQARAAAPRRHQLSSRWR*AQIQRR Trigger: CCGCCTTTGAATCTGTGCCCACCGCCATCTACTGCT...GAGCTGGTGCCTTCTTGGGGCTGCAGCTCTGGCTTGCTGCAGGGCTGTATGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR GCA 90 bp | GAAGGCACCAGCTCCTCTCTGTTCCACAGGCTGTCTCAAGATTCCAGCCCCAAGTATAGGCCAGCGAGATaGCTGCTACCCGCATGGCAC | + |
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Preference number: 4 (lower is better) Translates to: EGTSSSLFHRLSQDSSPKYRPAR*LLPAWH Trigger: GTGCCATGCGGGTAGCAGGCATCTCGCTGGCCTATA...CTTGGGGCTGGAATCTTGAGACAGCCTGTGGAACAGAGAGGAGCTGGTGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR TCA 90 bp | AAACAAGACCTGCCCTGGCCCCTCATATTTCTGAGGACCCTGGGTGTCATACAGTCCTGGGCAAACCTGTaGGCCATGTCCACCTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: KQDLPWPLIFLRTLGVIQSWANL*AMSTSS Trigger: CGACGAGGTGGACATGGCTCACAGGTTTGCCCAGGA...CTGTATGACACCCAGGGTCCTCAGAAATATGAGGGGCCAGGGCAGGTCTTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR GCA 90 bp | TGTCATACAGCCCTGCAGCAAGCCAGAGCTGCAGCCCCAAGAAGGCACCAGCTCAGCTGCTCAAGGAAGTaGTCACTGGATGATACACCC | + |
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Preference number: 4 (lower is better) Translates to: CHTALQQARAAAPRRHQLSCSRK*SLDDTP Trigger: GGGTGTATCATCCAGTGAGCACTTCCTTGAGCAGCT...GAGCTGGTGCCTTCTTGGGGCTGCAGCTCTGGCTTGCTGCAGGGCTGTATGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR GCA 90 bp | GAAGGCACCAGCTCCTCTCTGTTCCACAGGCTGTCTCAAGATTCCAGCCCCAAGAAGCCTTCACAACTTTaGTGCCAGCTCTCCGGCACC | + |
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Preference number: 4 (lower is better) Translates to: EGTSSSLFHRLSQDSSPKKPSQL*CQLSGT Trigger: GGTGCCGGAGAGCTGGCAGCAAAGTTGTGAAGGCTT...CTTGGGGCTGGAATCTTGAGACAGCCTGTGGAACAGAGAGGAGCTGGTGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | TGTTCCACAGGCTGTCTCAAGATTCCAGCCCCAAGGGTACCTTCAGTCTTCCCTTGCCTGCTACCCGCATaGCACCCCCATTGCCATAGG | + |
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Preference number: 4 (lower is better) Translates to: CSTGCLKIPAPRVPSVFPCLLPA*HPHCHR Trigger: CCTATGGCAATGGGGGTGCCATGCGGGTAGCAGGCA...AGGGAAGACTGAAGGTACCCTTGGGGCTGGAATCTTGAGACAGCCTGTGGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGAAGGCACCAGCTCCTCTCTGTTCCACAGGCTGTCTCAAGATTCCAGCAGCCATGGTGGCTATaGTGTCTGTGTCCCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: APRRHQLLSVPQAVSRFQQPWWL*CLCPHQ Trigger: TTGGTGGGGACACAGACACCATAGCCACCATGGCTG...CTGGAATCTTGAGACAGCCTGTGGAACAGAGAGGAGCTGGTGCCTTCTTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR TCA 90 bp | CTGGCCCCTCATATTTCTGAGGACCCTGGGTGTCATACAGCCCTGCAGCAAGCCGTGAGATGGAGTAGATaGGAGTCCTCTGGAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: LAPHISEDPGCHTALQQAVRWSR*ESSGDC Trigger: ACAGTCTCCAGAGGACTCTCATCTACTCCATCTCAC...GGCTTGCTGCAGGGCTGTATGACACCCAGGGTCCTCAGAAATATGAGGGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | TCCACAGGCTGTCTCAAGATTCCAGCCCCAAGGGTACCTTCAGTCTTCCCTCTACAATGGCCCCAGCCATaGTGGCTATGGTGTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: STGCLKIPAPRVPSVFPLQWPQP*WLWCLC Trigger: ACACAGACACCATAGCCACCATGGCTGGGGCCATTG...TAGAGGGAAGACTGAAGGTACCCTTGGGGCTGGAATCTTGAGACAGCCTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | CTGTCTCAAGATTCCAGCCCCAAGGGTACCTTCAGTCTTCCCTCTAGGATTGAGCCAGGGCCCTGGTCATaGCAGTGTCATCTGTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LSQDSSPKGTFSLPSRIEPGPWS*QCHLCS Trigger: ACTACACAGATGACACTGCCATGACCAGGGCCCTGG...CTCAATCCTAGAGGGAAGACTGAAGGTACCCTTGGGGCTGGAATCTTGAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | TGTTCCACAGGCTGTCTCAAGATTCCAGCCCCAAGGGTACCTTCAGTCTTCCCTGCAGGAAGCAGTAGATaGCGGTGGGCACAGATTCAA | + |
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Preference number: 4 (lower is better) Translates to: CSTGCLKIPAPRVPSVFPAGSSR*RWAQIQ Trigger: TTGAATCTGTGCCCACCGCCATCTACTGCTTCCTGC...AGGGAAGACTGAAGGTACCCTTGGGGCTGGAATCTTGAGACAGCCTGTGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CCA 90 bp | CTGTCTCAAGATTCCAGCCCCAAGGGTACCTTCAGTCTTCCCTCTAGGATTGAGAGTAAGCTCCAGCAATaGCCCCAGCCATGGTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: LSQDSSPKGTFSLPSRIESKLQQ*PQPWWL Trigger: TAGCCACCATGGCTGGGGCCATTGCTGGAGCTTACT...CTCAATCCTAGAGGGAAGACTGAAGGTACCCTTGGGGCTGGAATCTTGAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR TCA 90 bp | CTGTCTCAAGATTCCAGCCCCAAGGGTACCTTCAGTCTTCCCTCTAGGATTGAGTGTGTCCCCACCAAGTaGGATGGAGTAGATGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: LSQDSSPKGTFSLPSRIECVPTK*DGVDES Trigger: ACTCTCATCTACTCCATCTCACTTGGTGGGGACACA...CTCAATCCTAGAGGGAAGACTGAAGGTACCCTTGGGGCTGGAATCTTGAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS TCA 90 bp | CGGCGTGCCCGGGTCCGGCTCCAGGCTCTCGACGTGACTCAGGACTaGTGCCAGGCTGACGGTATCGTGTGCCTCGTAGACAGCGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: RRARVRLQALDVTQD*CQADGIVCLVDSAH Trigger: GTGGGCGCTGTCTACGAGGCACACGATACCGTCAGCCTGGCATCAGTCCTGAGTCACGTCGAGAGCCTGGAGCCGGACCCGGGCACGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CAA 90 bp | TGGGCTGAATGCCGGTCTCAGGAGCCAAACAGCCTGCTGCTGGCTCCGCCCACTTCGTCGAAGGCCTCCTaGGCCAGCAGGGACTGCACC | + |
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Preference number: 5 (lower is better) Translates to: WAECRSQEPNSLLLAPPTSSKAS*ASRDCT Trigger: GGTGCAGTCCCTGCTGGCCAAGGAGGCCTTCGACGA...AGTGGGCGGAGCCAGCAGCAGGCTGTTTGGCTCCTGAGACCGGCATTCAGCCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS GCA 90 bp | TGTCATCTGTGTAGTACAGTGTCTCTGTCCGCGCGCTGCCCGGCGTaGCCGGGTCCGGCTCCAGGCTCTCGACGTGACTCAGGACTGATG | + |
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Preference number: 5 (lower is better) Translates to: CHLCSTVSLSARCPA*PGPAPGSRRDSGLM Trigger: CATCAGTCCTGAGTCACGTCGAGAGCCTGGAGCCGGACCCGGGCACGCCGGGCAGCGCGCGGACAGAGACACTGTACTACACAGATGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS TCA 90 bp | GGTCCGGCTCCAGGCTCTCGACGTGACTCAGGACTGATGCCAGGCTaGCGGTATCGTGTGCCTCGTAGACAGCGCCCACGCAATCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GPAPGSRRDSGLMPG*RYRVPRRQRPRNLP Trigger: TGGGAGATTGCGTGGGCGCTGTCTACGAGGCACACGATACCGTCAGCCTGGCATCAGTCCTGAGTCACGTCGAGAGCCTGGAGCCGGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 90 bp | CGAAGGCCTCCTTGGCCAGCAGGGACTGCACCAGGGCCCTGGTCATaGCAGTGTCATCTGTGTAGTACAGTGTCTCTGTCCGCGCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RRPPWPAGTAPGPWS*QCHLCSTVSLSARC Trigger: GCAGCGCGCGGACAGAGACACTGTACTACACAGATGACACTGCCATGACCAGGGCCCTGGTGCAGTCCCTGCTGGCCAAGGAGGCCTTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS GCA 90 bp | GGCTCACCACGTCCTGGTCCAGCAGCTCTCCGACCTTCTTCAGCCTaGTGGAGTACGGACGCTCCTCCATACCCAACTCCTTGGCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: GSPRPGPAALRPSSA*WSTDAPPYPTPWRP Trigger: TGGACGCCAAGGAGTTGGGTATGGAGGAGCGTCCGTACTCCAGCAGGCTGAAGAAGGTCGGAGAGCTGCTGGACCAGGACGTGGTGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 90 bp | ATGATACACCCTGCAGAGCAAGGTGCACAGCCAGGGCCTGCAAGATaGCACCGTTATAGCCCAGGGAAGAGGCGTGGGTCAGCTGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: MIHPAEQGAQPGPAR*HRYSPGKRRGSAGP Trigger: CGGCCCAGCTGACCCACGCCTCTTCCCTGGGCTATAACGGTGCCATCTTGCAGGCCCTGGCTGTGCACCTTGCTCTGCAGGGTGTATCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS TCA 90 bp | CTGCTACCCGCATGGCACCCCCATTGCCATAGGAACCCTTCCCGTTaGACTGGGCCCGGGCAGGCTCATAGACATCACGGCACTTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LLPAWHPHCHRNPSR*TGPGQAHRHHGTWD Trigger: ATCCCAAGTGCCGTGATGTCTATGAGCCTGCCCGGGCCCAGTTCAACGGGAAGGGTTCCTATGGCAATGGGGGTGCCATGCGGGTAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 90 bp | CCATTCCCTAGCTCGGACACCACTTCCTCTCGGCTCACCACGTCCTaGTCCAGCAGCTCTCCGACCTTCTTCAGCCTGCTGGAGTACGGA | + |
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Preference number: 5 (lower is better) Translates to: PFPSSDTTSSRLTTS*SSSSPTFFSLLEYG Trigger: TCCGTACTCCAGCAGGCTGAAGAAGGTCGGAGAGCTGCTGGACCAGGACGTGGTGAGCCGAGAGGAAGTGGTGTCCGAGCTAGGGAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 90 bp | TCACCACGTCCTGGTCCAGCAGCTCTCCGACCTTCTTCAGCCTGCTaGAGTACGGACGCTCCTCCATACCCAACTCCTTGGCGTCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: SPRPGPAALRPSSAC*STDAPPYPTPWRPR Trigger: TCTTGGACGCCAAGGAGTTGGGTATGGAGGAGCGTCCGTACTCCAGCAGGCTGAAGAAGGTCGGAGAGCTGCTGGACCAGGACGTGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 90 bp | GCCAGCTCTCCGGCACCTGTTCCATCCCATAGTAAGCTCCAGCAATaGCCCCAGCCATGGTGGCTATGGTGTCTGTGTCCCCACCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: ASSPAPVPSHSKLQQ*PQPWWLWCLCPHQV Trigger: CACTTGGTGGGGACACAGACACCATAGCCACCATGGCTGGGGCCATTGCTGGAGCTTACTATGGGATGGAACAGGTGCCGGAGAGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 90 bp | TACGGACGCTCCTCCATACCCAACTCCTTGGCGTCCAAGACCGATTaGGCATCACCTTCCAGCTCCTCCATGTGGCCCAGAAGCTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: YGRSSIPNSLASKTD*ASPSSSSMWPRSCS Trigger: TGAGCAGCTTCTGGGCCACATGGAGGAGCTGGAAGGTGATGCCCAATCGGTCTTGGACGCCAAGGAGTTGGGTATGGAGGAGCGTCCGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 90 bp | TCTCAGGGTGAGGCTCCATGCAGCGCAGGAAGCAGTAGATGGCGGTaGGCACAGATTCAAAGGCGGCAATGCCATTCCCTAGCTCGGACA | + |
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Preference number: 5 (lower is better) Translates to: SQGEAPCSAGSSRWR*AQIQRRQCHSLART Trigger: TGTCCGAGCTAGGGAATGGCATTGCCGCCTTTGAATCTGTGCCCACCGCCATCTACTGCTTCCTGCGCTGCATGGAGCCTCACCCTGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 90 bp | AGGGGATCTCAGGGTGAGGCTCCATGCAGCGCAGGAAGCAGTAGATaGCGGTGGGCACAGATTCAAAGGCGGCAATGCCATTCCCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: RGSQGEAPCSAGSSR*RWAQIQRRQCHSLA Trigger: AGCTAGGGAATGGCATTGCCGCCTTTGAATCTGTGCCCACCGCCATCTACTGCTTCCTGCGCTGCATGGAGCCTCACCCTGAGATCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CAA 90 bp | GCCCCAAGAAGGCACCAGCTCCTCTCTGTTCCACAGGCTGTCTCAAGATTCCAGGGCGTCCAAGACCGATaGGGCATCACCTTCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: APRRHQLLSVPQAVSRFQGVQDR*GITFQL Trigger: GAGCTGGAAGGTGATGCCCAATCGGTCTTGGACGCC...CTGGAATCTTGAGACAGCCTGTGGAACAGAGAGGAGCTGGTGCCTTCTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CAA 90 bp | TGTCATACAGCCCTGCAGCAAGCCAGAGCTGCAGCCCCAAGAAGGCACCAGCTCAAAGCCTTCACAACTTaGCTGCCAGCTCTCCGGCAC | + |
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Preference number: 5 (lower is better) Translates to: CHTALQQARAAAPRRHQLKAFTT*LPALRH Trigger: GTGCCGGAGAGCTGGCAGCAAAGTTGTGAAGGCTTT...GAGCTGGTGCCTTCTTGGGGCTGCAGCTCTGGCTTGCTGCAGGGCTGTATGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS GCA 90 bp | TCACCTTCCAGCTCCTCCATGTGGCCCAGAAGCTGCTCAAGGAAGTaGTCACTGGATGATACACCCTGCAGAGCAAGGTGCACAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SPSSSSMWPRSCSRK*SLDDTPCRARCTAR Trigger: CCTGGCTGTGCACCTTGCTCTGCAGGGTGTATCATCCAGTGAGCACTTCCTTGAGCAGCTTCTGGGCCACATGGAGGAGCTGGAAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 90 bp | TTGGCGTCCAAGACCGATTGGGCATCACCTTCCAGCTCCTCCATGTaGCCCAGAAGCTGCTCAAGGAAGTGCTCACTGGATGATACACCC | + |
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Preference number: 5 (lower is better) Translates to: LASKTDWASPSSSSM*PRSCSRKCSLDDTP Trigger: GGGTGTATCATCCAGTGAGCACTTCCTTGAGCAGCTTCTGGGCCACATGGAGGAGCTGGAAGGTGATGCCCAATCGGTCTTGGACGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 90 bp | GCACCTGTTCCATCCCATAGTAAGCTCCAGCAATGGCCCCAGCCATaGTGGCTATGGTGTCTGTGTCCCCACCAAGTGAGATGGAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: APVPSHSKLQQWPQP*WLWCLCPHQVRWSR Trigger: TCTACTCCATCTCACTTGGTGGGGACACAGACACCATAGCCACCATGGCTGGGGCCATTGCTGGAGCTTACTATGGGATGGAACAGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS TCA 90 bp | AATGGCCCCAGCCATGGTGGCTATGGTGTCTGTGTCCCCACCAAGTaGGATGGAGTAGATGAGAGTCCTCTGGAGACTGTTGAAGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: NGPSHGGYGVCVPTK*DGVDESPLETVEGG Trigger: TCCACCTTCAACAGTCTCCAGAGGACTCTCATCTACTCCATCTCACTTGGTGGGGACACAGACACCATAGCCACCATGGCTGGGGCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CAA 90 bp | CTGTCTCAAGATTCCAGCCCCAAGGGTACCTTCAGTCTTCCCTCTAGGATTGAGGTCCTCTGGAGACTGTaGAAGGTGGAGGGGATCTCA | + |
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Preference number: 5 (lower is better) Translates to: LSQDSSPKGTFSLPSRIEVLWRL*KVEGIS Trigger: TGAGATCCCCTCCACCTTCAACAGTCTCCAGAGGAC...CTCAATCCTAGAGGGAAGACTGAAGGTACCCTTGGGGCTGGAATCTTGAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS-3UTR CAA 90 bp | AAACAAGACCTGCCCTGGCCCCTCATATTTCTGAGGACCCTGGGTGTCATACAGAAACTTCTGTACATCTaGGACACTGCTATAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: KQDLPWPLIFLRTLGVIQKLLYI*DTAIGQ Trigger: CTGGCCTATAGCAGTGTCCAAGATGTACAGAAGTTT...CTGTATGACACCCAGGGTCCTCAGAAATATGAGGGGCCAGGGCAGGTCTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS TCA 72 bp | CCCGGCGTGCCCGGGTCCGGCTCCAGGCTCTCGACGTaGCTCAGGACTGATGCCAGGCTGACGGTATCGTGT | + |
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Preference number: 6 (lower is better) Translates to: PGVPGSGSRLST*LRTDARLTVSC Trigger: ACACGATACCGTCAGCCTGGCATCAGTCCTGAGTCACGTCGAGAGCCTGGAGCCGGACCCGGGCACGCCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS GCA 72 bp | TGTCATCTGTGTAGTACAGTGTCTCTGTCCGCGCGCTaGCCGGCGTGCCCGGGTCCGGCTCCAGGCTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: CHLCSTVSLSAR*PACPGPAPGSR Trigger: TCGAGAGCCTGGAGCCGGACCCGGGCACGCCGGGCAGCGCGCGGACAGAGACACTGTACTACACAGATGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS TCA 72 bp | CGGGTCCGGCTCCAGGCTCTCGACGTGACTCAGGACTaGTGCCAGGCTGACGGTATCGTGTGCCTCGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: RVRLQALDVTQD*CQADGIVCLVD Trigger: GTCTACGAGGCACACGATACCGTCAGCCTGGCATCAGTCCTGAGTCACGTCGAGAGCCTGGAGCCGGACCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS TCA 72 bp | GCATGGCACCCCCATTGCCATAGGAACCCTTCCCGTTaGACTGGGCCCGGGCAGGCTCATAGACATCACGGC | + |
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Preference number: 6 (lower is better) Translates to: AWHPHCHRNPSR*TGPGQAHRHHG Trigger: GCCGTGATGTCTATGAGCCTGCCCGGGCCCAGTTCAACGGGAAGGGTTCCTATGGCAATGGGGGTGCCATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 72 bp | CCTGCAGAGCAAGGTGCACAGCCAGGGCCTGCAAGATaGCACCGTTATAGCCCAGGGAAGAGGCGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PAEQGAQPGPAR*HRYSPGKRRGS Trigger: TGACCCACGCCTCTTCCCTGGGCTATAACGGTGCCATCTTGCAGGCCCTGGCTGTGCACCTTGCTCTGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS GCA 72 bp | CGTCCTGGTCCAGCAGCTCTCCGACCTTCTTCAGCCTaGTGGAGTACGGACGCTCCTCCATACCCAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: RPGPAALRPSSA*WSTDAPPYPTP Trigger: AGGAGTTGGGTATGGAGGAGCGTCCGTACTCCAGCAGGCTGAAGAAGGTCGGAGAGCTGCTGGACCAGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CAA 90 bp | GTACGGACGCTCCTCCATACCCAACTCCTTGGCGTCCAAGACCGATaGGGCATCACCTTCCAGCTCCTCCATGTGGCCCAGAAGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VRTLLHTQLLGVQDR*GITFQLLHVAQKLL Trigger: GAGCAGCTTCTGGGCCACATGGAGGAGCTGGAAGGTGATGCCCAATCGGTCTTGGACGCCAAGGAGTTGGGTATGGAGGAGCGTCCGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 72 bp | CCTTGGCCAGCAGGGACTGCACCAGGGCCCTGGTCATaGCAGTGTCATCTGTGTAGTACAGTGTCTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PWPAGTAPGPWS*QCHLCSTVSLS Trigger: GGACAGAGACACTGTACTACACAGATGACACTGCCATGACCAGGGCCCTGGTGCAGTCCCTGCTGGCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 72 bp | CAGGGTGAGGCTCCATGCAGCGCAGGAAGCAGTAGATaGCGGTGGGCACAGATTCAAAGGCGGCAATGCCAT | + |
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Preference number: 6 (lower is better) Translates to: QGEAPCSAGSSR*RWAQIQRRQCH Trigger: ATGGCATTGCCGCCTTTGAATCTGTGCCCACCGCCATCTACTGCTTCCTGCGCTGCATGGAGCCTCACCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 72 bp | CCGGCACCTGTTCCATCCCATAGTAAGCTCCAGCAATaGCCCCAGCCATGGTGGCTATGGTGTCTGTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: PAPVPSHSKLQQ*PQPWWLWCLCP Trigger: GGGACACAGACACCATAGCCACCATGGCTGGGGCCATTGCTGGAGCTTACTATGGGATGGAACAGGTGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CAA 90 bp | CAGGCTCTGGGCCAGGACGTCTGTCTCCTCAAAGCCTTCACAACTTaGCTGCCAGCTCTCCGGCACCTGTTCCATCCCATAGTAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QALGQDVCLLKAFTT*LPALRHLFHPIVSS Trigger: GGAGCTTACTATGGGATGGAACAGGTGCCGGAGAGCTGGCAGCAAAGTTGTGAAGGCTTTGAGGAGACAGACGTCCTGGCCCAGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 72 bp | GAGGCTCCATGCAGCGCAGGAAGCAGTAGATGGCGGTaGGCACAGATTCAAAGGCGGCAATGCCATTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: EAPCSAGSSRWR*AQIQRRQCHSL Trigger: TAGGGAATGGCATTGCCGCCTTTGAATCTGTGCCCACCGCCATCTACTGCTTCCTGCGCTGCATGGAGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS GCA 72 bp | TACATCTTGGACACTGCTATAGGCCAGCGAGATGCCTaGTACCCGCATGGCACCCCCATTGCCATAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: YILDTAIGQRDA*YPHGTPIAIGT Trigger: GGTTCCTATGGCAATGGGGGTGCCATGCGGGTAGCAGGCATCTCGCTGGCCTATAGCAGTGTCCAAGATGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS GCA 72 bp | TCTGTACATCTTGGACACTGCTATAGGCCAGCGAGATaGCTGCTACCCGCATGGCACCCCCATTGCCATAGG | + |
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Preference number: 6 (lower is better) Translates to: SVHLGHCYRPAR*LLPAWHPHCHR Trigger: CCTATGGCAATGGGGGTGCCATGCGGGTAGCAGGCATCTCGCTGGCCTATAGCAGTGTCCAAGATGTACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS GCA 72 bp | AGCTGCTCAAGGAAGTGCTCACTGGATGATACACCCTaGAGAGCAAGGTGCACAGCCAGGGCCTGCAAGATG | + |
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Preference number: 6 (lower is better) Translates to: SCSRKCSLDDTP*RARCTARACKM Trigger: CATCTTGCAGGCCCTGGCTGTGCACCTTGCTCTGCAGGGTGTATCATCCAGTGAGCACTTCCTTGAGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 72 bp | TCCCATAGTAAGCTCCAGCAATGGCCCCAGCCATGGTaGCTATGGTGTCTGTGTCCCCACCAAGTGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: SHSKLQQWPQPW*LWCLCPHQVRW Trigger: CCATCTCACTTGGTGGGGACACAGACACCATAGCCACCATGGCTGGGGCCATTGCTGGAGCTTACTATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 72 bp | CCATCCCATAGTAAGCTCCAGCAATGGCCCCAGCCATaGTGGCTATGGTGTCTGTGTCCCCACCAAGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PSHSKLQQWPQP*WLWCLCPHQVR Trigger: TCTCACTTGGTGGGGACACAGACACCATAGCCACCATGGCTGGGGCCATTGCTGGAGCTTACTATGGGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS CCA 72 bp | AGTAAGCTCCAGCAATGGCCCCAGCCATGGTGGCTATaGTGTCTGTGTCCCCACCAAGTGAGATGGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SKLQQWPQPWWL*CLCPHQVRWSR Trigger: TCTACTCCATCTCACTTGGTGGGGACACAGACACCATAGCCACCATGGCTGGGGCCATTGCTGGAGCTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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| CDS TCA 72 bp | AGCCATGGTGGCTATGGTGTCTGTGTCCCCACCAAGTaGGATGGAGTAGATGAGAGTCCTCTGGAGACTGTT | + |
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Preference number: 6 (lower is better) Translates to: SHGGYGVCVPTK*DGVDESPLETV Trigger: AACAGTCTCCAGAGGACTCTCATCTACTCCATCTCACTTGGTGGGGACACAGACACCATAGCCACCATGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102617.5 |
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