Pregenerated sensors for ADPRM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020910Ensembl transcript IDs: ENSMUST00000116363.2, ENSMUST00000146338.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCATCCACGTAGTTCCAAGCCAGGCACACGCTGTCAGAGGCCTCTaGGTAAATAGGAAGATGGCTCACAATCACCACCTTCTCCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: SIHVVPSQAHAVRGL*VNRKMAHNHHLLLV Trigger: AACCAGGAGAAGGTGGTGATTGTGAGCCATCTTCCTATTTACCCAGAGGCCTCTGACAGCGTGTGCCTGGCTTGGAACTACGTGGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR TCA 90 bp | GTGACCAGCAAGGAAACACACCACACACTTGTGAGACCATATGATTaGCAGAGCATCCACGTAGTTCCAAGCCAGGCACACGCTGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: VTSKETHHTLVRPYD*QSIHVVPSQAHAVR Trigger: TCTGACAGCGTGTGCCTGGCTTGGAACTACGTGGATGCTCTGTCAATCATATGGTCTCACAAGTGTGTGGTGTGTTTCCTTGCTGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR TCA 90 bp | GTGTGTGACCAGCAAGGAAACACACCACACACTTGTGAGACCATATaGTTGACAGAGCATCCACGTAGTTCCAAGCCAGGCACACGCTGT | + |
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Preference number: 1 (lower is better) Translates to: VCDQQGNTPHTCETI*LTEHPRSSKPGTRC Trigger: ACAGCGTGTGCCTGGCTTGGAACTACGTGGATGCTCTGTCAATCATATGGTCTCACAAGTGTGTGGTGTGTTTCCTTGCTGGTCACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR TCA 90 bp | GGAACTCTGCCTCTCCCTTTCAGCAGCATTTTGTCAGGGAAGACATaGACTGTGCCAAAGGCCTGGCTGTCCGGAGCTGTTTCAATAACT | + |
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Preference number: 1 (lower is better) Translates to: GTLPLPFSSILSGKT*TVPKAWLSGAVSIT Trigger: AGTTATTGAAACAGCTCCGGACAGCCAGGCCTTTGGCACAGTTCATGTCTTCCCTGACAAAATGCTGCTGAAAGGGAGAGGCAGAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR CCA 90 bp | GTGTCAGAGAATGTAAGAACTTCATTCAGCCAGTTCAGCTGTTCTTaGCTGAATCCTCCGTTAAACTGGACATACTGGGGCTCAGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: VSENVRTSFSQFSCS*LNPPLNWTYWGSES Trigger: ACTTTCTGAGCCCCAGTATGTCCAGTTTAACGGAGGATTCAGCCAAGAACAGCTGAACTGGCTGAATGAAGTTCTTACATTCTCTGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR-3UTR TCA 90 bp | AACTCCTTCAAGGTTGACATGGTGCACGCCGAAAGGATCTTCAGAGTAGCCACCCACACCACACACTTGTaGGACCATATGATTGACAGA | + |
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Preference number: 2 (lower is better) Translates to: NSFKVDMVHAERIFRVATHTTHL*DHMIDR Trigger: TCTGTCAATCATATGGTCTCACAAGTGTGTGGTGTG...GGTGGCTACTCTGAAGATCCTTTCGGCGTGCACCATGTCAACCTTGAAGGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAGCCACCGTCATGTGTGTGACCAGCAAGGAAACACACCACACACTTGTGAGAATCCTCCGTTAAACTaGACATACTGGGGCTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SSHRHVCDQQGNTPHTCENPPLN*TYWGSE Trigger: TTCTGAGCCCCAGTATGTCCAGTTTAACGGAGGATT...CTCACAAGTGTGTGGTGTGTTTCCTTGCTGGTCACACACATGACGGTGGCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR CAA 90 bp | CGTGTCAGAGAATGTAAGAACTTCATTCAGCCAGTTCAGCTGTTCTaGGCTGAATCCTCCGTTAAACTGGACATACTGGGGCTCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RVRECKNFIQPVQLF*AESSVKLDILGLRK Trigger: CTTTCTGAGCCCCAGTATGTCCAGTTTAACGGAGGATTCAGCCAAGAACAGCTGAACTGGCTGAATGAAGTTCTTACATTCTCTGACACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAATCACAAAGCTTCTTCCCCAGTTCAGCTGTTCTTaGCTGAATCCTCCGTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: HFLQSRQDNEAKITKLLPQFSCS*LNPPLN Trigger: GTTTAACGGAGGATTCAGCCAAGAACAGCTGAACTG...GGGAAGAAGCTTTGTGATTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR CCA 72 bp | GTAGTTCCAAGCCAGGCACACGCTGTCAGAGGCCTCTaGGTAAATAGGAAGATGGCTCACAATCACCACCTT | + |
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Preference number: 3 (lower is better) Translates to: VVPSQAHAVRGL*VNRKMAHNHHL Trigger: AAGGTGGTGATTGTGAGCCATCTTCCTATTTACCCAGAGGCCTCTGACAGCGTGTGCCTGGCTTGGAACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR CCA 72 bp | AATGTAAGAACTTCATTCAGCCAGTTCAGCTGTTCTTaGCTGAATCCTCCGTTAAACTGGACATACTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: NVRTSFSQFSCS*LNPPLNWTYWG Trigger: GCCCCAGTATGTCCAGTTTAACGGAGGATTCAGCCAAGAACAGCTGAACTGGCTGAATGAAGTTCTTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGCTGTCCGGAGCTGTTTCAATAACTCCTTCAAGGTTGACATGGTGCACGCATCAGCCGGGGAACTaGGCACCAGCTTATCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: AWLSGAVSITPSRLTWCTHQPGN*APAYQP Trigger: TGGCTGATAAGCTGGTGCCCAGTTCCCCGGCTGATG...CGTGCACCATGTCAACCTTGAAGGAGTTATTGAAACAGCTCCGGACAGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR TCA 90 bp | GCCTGGCTGTCCGGAGCTGTTTCAATAACTCCTTCAAGGTTGACATGGTGCACGGGAAAACAGTGGCTCTaGAGCATCAGCCGGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: AWLSGAVSITPSRLTWCTGKQWL*SISRGT Trigger: AGTTCCCCGGCTGATGCTTCAGAGCCACTGTTTTCC...CGTGCACCATGTCAACCTTGAAGGAGTTATTGAAACAGCTCCGGACAGCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGCATTTTGTCAGGGAAGACATGAACTGTGCCAAAGGCCTGGCTGTCCGGACACTGCTCATATTTTaGAGAAGATGGGTCTATGCC | + |
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Preference number: 4 (lower is better) Translates to: QQHFVREDMNCAKGLAVRTLLIF*RRWVYA Trigger: GGCATAGACCCATCTTCTCCAAAATATGAGCAGTGT...CCGGACAGCCAGGCCTTTGGCACAGTTCATGTCTTCCCTGACAAAATGCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | ATGGTGCACGCCGAAAGGATCTTCAGAGTAGCCACCGTCATGTGTGTGACCAGCAGCAATAATTCACCTTaGGGACTATTCAACTCCACA | + |
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Preference number: 4 (lower is better) Translates to: MVHAERIFRVATVMCVTSSNNSP*GLFNST Trigger: TGTGGAGTTGAATAGTCCCCAAGGTGAATTATTGCT...GCTGGTCACACACATGACGGTGGCTACTCTGAAGATCCTTTCGGCGTGCACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR TCA 90 bp | AATCACCACCTTCTCCTGGTTCGTGTCAGAGAATGTAAGAACTTCATTCAGCCACATTGTAGCCATCGATaGTGTCTCCAAGCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NHHLLLVRVRECKNFIQPHCSHR*CLQAAG Trigger: TCCTGCAGCTTGGAGACATCATCGATGGCTACAATG...TGGCTGAATGAAGTTCTTACATTCTCTGACACGAACCAGGAGAAGGTGGTGATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR TCA 90 bp | AATCACCACCTTCTCCTGGTTCGTGTCAGAGAATGTAAGAACTTCATTCAGCCAAGCGTAATAGTTCTCTaGTGGCGTGGTCTCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: NHHLLLVRVRECKNFIQPSVIVL*WRGLRM Trigger: CATCCTGAGACCACGCCATCAGAGAACTATTACGCT...TGGCTGAATGAAGTTCTTACATTCTCTGACACGAACCAGGAGAAGGTGGTGATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCCTTTCAGCAGCATTTTGTCAGGGAAGACATGAACTGTGCCAAAGGCCTCCGGAACTTAGGGAATaGTACAAAGTGATAAGCGTA | + |
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Preference number: 4 (lower is better) Translates to: LSLSAAFCQGRHELCQRPPELRE*YKVISV Trigger: TACGCTTATCACTTTGTACCATTCCCTAAGTTCCGG...AGGCCTTTGGCACAGTTCATGTCTTCCCTGACAAAATGCTGCTGAAAGGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR GCA 90 bp | TTGGCTGAATCCTCCGTTAAACTGGACATACTGGGGCTCAGAAAGTCCTTAATCGGACACAACAGGGCATaGTGCTTTCTTTATTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LAESSVKLDILGLRKSLIGHNRA*CFLYSS Trigger: ACTGGAATAAAGAAAGCAGCATGCCCTGTTGTGTCC...GATTAAGGACTTTCTGAGCCCCAGTATGTCCAGTTTAACGGAGGATTCAGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR GCA 90 bp | AATCACCACCTTCTCCTGGTTCGTGTCAGAGAATGTAAGAACTTCATTCAGCCAGAGAAGATGGGTCTATaGCCAAGACACTCAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NHHLLLVRVRECKNFIQPEKMGL*PRHSGH Trigger: ATGACCTGAGTGTCTTGGGCATAGACCCATCTTCTC...TGGCTGAATGAAGTTCTTACATTCTCTGACACGAACCAGGAGAAGGTGGTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| 3UTR CAA 72 bp | GAATGTAAGAACTTCATTCAGCCAGTTCAGCTGTTCTaGGCTGAATCCTCCGTTAAACTGGACATACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ECKNFIQPVQLF*AESSVKLDILG Trigger: CCCCAGTATGTCCAGTTTAACGGAGGATTCAGCCAAGAACAGCTGAACTGGCTGAATGAAGTTCTTACATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGACATCAGCCGGGGAACTaGGCACCAGCTTATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRHQPGN*APAYQP Trigger: TGGCTGATAAGCTGGTGCCCAGTTCCCCGGCTGATG...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | TTGGCTGAATCCTCCGTTAAACTGGACATACTGGGGCTCAGAAAGTCCTTAATCCCACGTGTGGTGAACTaGAACTTTAAGCATCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LAESSVKLDILGLRKSLIPRVVN*NFKHLK Trigger: TTTCAGATGCTTAAAGTTCCAGTTCACCACACGTGG...GATTAAGGACTTTCTGAGCCCCAGTATGTCCAGTTTAACGGAGGATTCAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR TCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAAGGAAAACAGTGGCTCTaGAGCATCAGCCGGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKGKQWL*SISRGT Trigger: AGTTCCCCGGCTGATGCTTCAGAGCCACTGTTTTCC...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR GCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAGGAAGACATGAACTGTaGCAAAGGCCTGGCTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRGRHEL*QRPGCP Trigger: CGGACAGCCAGGCCTTTGGCACAGTTCATGTCTTCC...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR CCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAAACTGTGCCAAAGGCCTaGCTGTCCGGAGCTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKTVPKA*LSGAVS Trigger: TGAAACAGCTCCGGACAGCCAGGCCTTTGGCACAGT...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR TCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAATTGTCAGGGAAGACATaGACTGTGCCAAAGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKLSGKT*TVPKAW Trigger: CCAGGCCTTTGGCACAGTTCATGTCTTCCCTGACAA...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR TCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGACATTGTAGCCATCGATaGTGTCTCCAAGCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRHCSHR*CLQAAG Trigger: TCCTGCAGCTTGGAGACATCATCGATGGCTACAATG...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR TCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGATTCCCCCACGTGTGGTaGACTGGAACTTTAAGCATC | + |
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Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRFPHVW*TGTLSI Trigger: GATGCTTAAAGTTCCAGTTCACCACACGTGGGGGAA...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR TCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAATTCCCCCACGTGTGGTaGACTGGAACTTTAAGCATC | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKFPHVW*TGTLSI Trigger: GATGCTTAAAGTTCCAGTTCACCACACGTGGGGGAA...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR TCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAAAGCGTAATAGTTCTCTaGTGGCGTGGTCTCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKSVIVL*WRGLRM Trigger: CATCCTGAGACCACGCCATCAGAGAACTATTACGCT...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR GCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAAATGATGTCTCCAAGCTaGAGGACACAACAGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKMMSPS*RTQQGM Trigger: CATGCCCTGTTGTGTCCTGCAGCTTGGAGACATCAT...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR GCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAATTCTGTCTGGAACTCTaGCTCTCCCTTTCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKFCLEL*LSLSAA Trigger: TGCTGCTGAAAGGGAGAGGCAGAGTTCCAGACAGAA...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR CCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGACCTTCAAGGTTGACATaGTGCACGCCGAAAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRPSRLT*CTPKGS Trigger: AGATCCTTTCGGCGTGCACCATGTCAACCTTGAAGG...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR GCA 90 bp | GTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAATCACAAAGCCACAACAGGGCATGCTaGTTTCTTTATTCCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VSFTFYKADKIMRRKSQSHNRAC*FLYSSL Trigger: AAGACTGGAATAAAGAAAGCAGCATGCCCTGTTGTG...GCTTTGTGATTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR GCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAAGAGAAGATGGGTCTATaGCCAAGACACTCAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKEKMGL*PRHSGH Trigger: ATGACCTGAGTGTCTTGGGCATAGACCCATCTTCTC...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR TCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAACACACCACACACTTGTaGGACCATATGATTGACAGA | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKHTTHL*DHMIDR Trigger: TCTGTCAATCATATGGTCTCACAAGTGTGTGGTGTG...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR GCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAAGGACACAACAGGGCATaGTGCTTTCTTTATTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKGHNRA*CFLYSS Trigger: ACTGGAATAAAGAAAGCAGCATGCCCTGTTGTGTCC...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAGGATGCTGTGCAATCTaGTCTTCTAGAAACTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRGCCAI*SSRNLL Trigger: CAGCAAGTTTCTAGAAGACCAGATTGCACAGCATCC...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGATTAAACTGGACATACTaGGGCTCAGAAAGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRLNWTY*GSESPW Trigger: CCAAGGACTTTCTGAGCCCCAGTATGTCCAGTTTAA...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR CCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAAAATCCTCCGTTAAACTaGACATACTGGGGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKNPPLN*TYWGSE Trigger: TTCTGAGCCCCAGTATGTCCAGTTTAACGGAGGATT...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR CCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGACAGTTCAGCTGTTCTTaGCTGAATCCTCCGTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRQFSCS*LNPPLN Trigger: GTTTAACGGAGGATTCAGCCAAGAACAGCTGAACTG...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR CCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAAATCACCACCTTCTCCTaGTTCGTGTCAGAGAATGTA | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKITTFS*FVSENV Trigger: TACATTCTCTGACACGAACCAGGAGAAGGTGGTGAT...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR GCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGACACAACAGGGCATGCTaGTTTCTTTATTCCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRHNRAC*FLYSSL Trigger: AAGACTGGAATAAAGAAAGCAGCATGCCCTGTTGTG...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGACCACGTGTGGTGAACTaGAACTTTAAGCATCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRPRVVN*NFKHLK Trigger: TTTCAGATGCTTAAAGTTCCAGTTCACCACACGTGG...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAACCGGAACTTAGGGAATaGTACAAAGTGATAAGCGTA | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKPELRE*YKVISV Trigger: TACGCTTATCACTTTGTACCATTCCCTAAGTTCCGG...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR CCA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAAACACTGCTCATATTTTaGAGAAGATGGGTCTATGCC | + |
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Preference number: 4 (lower is better) Translates to: HKTVSFTFYKADKIMRRKTLLIF*RRWVYA Trigger: GGCATAGACCCATCTTCTCCAAAATATGAGCAGTGT...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR TCA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAGGAACTTTAAGCATCTaGAATGTGTTCATGACAAGT | + |
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Preference number: 4 (lower is better) Translates to: KHKTVSFTFYKADKIMRRGTLSI*NVFMTS Trigger: ACTTGTCATGAACACATTTCAGATGCTTAAAGTTCC...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR CAA 90 bp | AAAGGCCTGGCTGTCCGGAGCTGTTTCAATAACTCCTTCAAGGTTGACATGGTGAACTCCACATTTGGGTaGTGCTCCCTCAGCATCTTC | + |
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Preference number: 5 (lower is better) Translates to: KGLAVRSCFNNSFKVDMVNSTFG*CSLSIF Trigger: GAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTT...CACCATGTCAACCTTGAAGGAGTTATTGAAACAGCTCCGGACAGCCAGGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS CCA 90 bp | CAGTTCAGCTGTTCTTGGCTGAATCCTCCGTTAAACTGGACATACTaGGGCTCAGAAAGTCCTTGGGGACTATTCAACTCCACATTTGGG | + |
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Preference number: 5 (lower is better) Translates to: QFSCSWLNPPLNWTY*GSESPWGLFNSTFG Trigger: CCCAAATGTGGAGTTGAATAGTCCCCAAGGACTTTCTGAGCCCCAGTATGTCCAGTTTAACGGAGGATTCAGCCAAGAACAGCTGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS CCA 90 bp | TCATTCAGCCAGTTCAGCTGTTCTTGGCTGAATCCTCCGTTAAACTaGACATACTGGGGCTCAGAAAGTCCTTGGGGACTATTCAACTCC | + |
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Preference number: 5 (lower is better) Translates to: SFSQFSCSWLNPPLN*TYWGSESPWGLFNS Trigger: GGAGTTGAATAGTCCCCAAGGACTTTCTGAGCCCCAGTATGTCCAGTTTAACGGAGGATTCAGCCAAGAACAGCTGAACTGGCTGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTGTCCGGAGCTGTTTCAATAACTCCTTCAAGGTTGACATGGTGCACGCCTACACTGCTCATATTTaGGAGAAGATGGGTCTATGC | + |
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Preference number: 5 (lower is better) Translates to: LAVRSCFNNSFKVDMVHAYTAHI*EKMGLC Trigger: GCATAGACCCATCTTCTCCAAAATATGAGCAGTGTA...GGCGTGCACCATGTCAACCTTGAAGGAGTTATTGAAACAGCTCCGGACAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS GCA 90 bp | TTCAACTCCACATTTGGGTTGTGCTCCCTCAGCATCTTCATACACTaGTCATATTTTGGAGAAGATGGGTCTATGCCCAAGACACTCAGG | + |
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Preference number: 5 (lower is better) Translates to: FNSTFGLCSLSIFIH*SYFGEDGSMPKTLR Trigger: CCTGAGTGTCTTGGGCATAGACCCATCTTCTCCAAAATATGAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS GCA 90 bp | GGCTCAGAAAGTCCTTGGGGACTATTCAACTCCACATTTGGGTTGTaGTCCCTCAGCATCTTCATACACTGCTCATATTTTGGAGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: GSESPWGLFNSTFGL*SLSIFIHCSYFGED Trigger: ATCTTCTCCAAAATATGAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGACTTTCTGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS TCA 90 bp | CTAGAGACTTTTCTGATACTTTATACTGTGCATTGTAGCCATCGATaGTGTCTCCAAGCTGCAGGACACAACAGGGCATGCTGCTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: LETFLILYTVHCSHR*CLQAAGHNRACCFL Trigger: AAGAAAGCAGCATGCCCTGTTGTGTCCTGCAGCTTGGAGACATCATCGATGGCTACAATGCACAGTATAAAGTATCAGAAAAGTCTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS GCA 90 bp | AGCAATAATTCACCTTGGGGACTATTCAACTCCACATTTGGGTTGTaGTCCCTCAGCATCTTCATACACTGCTCATATTTTGGAGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: SNNSPWGLFNSTFGL*SLSIFIHCSYFGED Trigger: ATCTTCTCCAAAATATGAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGTGAATTATTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS-3UTR CAA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAAAACTCCACATTTGGGTaGTGCTCCCTCAGCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKTVSFTFYKADKIMRRKNSTFG*CSLSIF Trigger: GAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTT...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR CAA 90 bp | CATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGAAAACCAGTTCAGCTGTTCTaGGCTGAATCCTCCGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: HKTVSFTFYKADKIMRRKPVQLF*AESSVK Trigger: TTTAACGGAGGATTCAGCCAAGAACAGCTGAACTGG...TTTTCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS-3UTR CAA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGATACACTGCTCATATTTaGGAGAAGATGGGTCTATGC | + |
|
Preference number: 5 (lower is better) Translates to: KHKTVSFTFYKADKIMRRYTAHI*EKMGLC Trigger: GCATAGACCCATCTTCTCCAAAATATGAGCAGTGTA...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS-3UTR CAA 90 bp | AAACATAAAACAGTATCGTTCACTTTCTACAAAGCAGACAAGATAATGAGGCGATGGTCTTCTAGAAACTaGCTGTTCAGTTTAGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KHKTVSFTFYKADKIMRRWSSRN*LFSLEL Trigger: AAGCTCTAAACTGAACAGCAAGTTTCTAGAAGACCA...TCGCCTCATTATCTTGTCTGCTTTGTAGAAAGTGAACGATACTGTTTTATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS CCA 72 bp | CCGTTAAACTGGACATACTGGGGCTCAGAAAGTCCTTaGGGACTATTCAACTCCACATTTGGGTTGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLNWTYWGSESP*GLFNSTFGLCS Trigger: GGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGACTTTCTGAGCCCCAGTATGTCCAGTTTAACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS CCA 72 bp | CTCAGAAAGTCCTTGGGGACTATTCAACTCCACATTTaGGTTGTGCTCCCTCAGCATCTTCATACACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LRKSLGTIQLHI*VVLPQHLHTLL Trigger: GAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGACTTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS CCA 72 bp | TGTTCTTGGCTGAATCCTCCGTTAAACTGGACATACTaGGGCTCAGAAAGTCCTTGGGGACTATTCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: CSWLNPPLNWTY*GSESPWGLFNS Trigger: GGAGTTGAATAGTCCCCAAGGACTTTCTGAGCCCCAGTATGTCCAGTTTAACGGAGGATTCAGCCAAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS CAA 72 bp | GCTCAGAAAGTCCTTGGGGACTATTCAACTCCACATTaGGGTTGTGCTCCCTCAGCATCTTCATACACTGCT | + |
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Preference number: 6 (lower is better) Translates to: AQKVLGDYSTPH*GCAPSASSYTA Trigger: AGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGACTTTCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS CAA 72 bp | TCCGTTAAACTGGACATACTGGGGCTCAGAAAGTCCTaGGGGACTATTCAACTCCACATTTGGGTTGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SVKLDILGLRKS*GTIQLHIWVVL Trigger: GAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGACTTTCTGAGCCCCAGTATGTCCAGTTTAACGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS TCA 72 bp | AGGGAATGGTACAAAGTGATAAGCGTAATAGTTCTCTaGTGGCGTGGTCTCAGGATGCTGTGCAATCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: REWYKVISVIVL*WRGLRMLCNLV Trigger: GACCAGATTGCACAGCATCCTGAGACCACGCCATCAGAGAACTATTACGCTTATCACTTTGTACCATTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS CAA 72 bp | TGTGCTCCCTCAGCATCTTCATACACTGCTCATATTTaGGAGAAGATGGGTCTATGCCCAAGACACTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: CAPSASSYTAHI*EKMGLCPRHSG Trigger: ACCTGAGTGTCTTGGGCATAGACCCATCTTCTCCAAAATATGAGCAGTGTATGAAGATGCTGAGGGAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS TCA 72 bp | TTTCTGATACTTTATACTGTGCATTGTAGCCATCGATaGTGTCTCCAAGCTGCAGGACACAACAGGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: FLILYTVHCSHR*CLQAAGHNRAC Trigger: GCATGCCCTGTTGTGTCCTGCAGCTTGGAGACATCATCGATGGCTACAATGCACAGTATAAAGTATCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS GCA 72 bp | ACATTTGGGTTGTGCTCCCTCAGCATCTTCATACACTaGTCATATTTTGGAGAAGATGGGTCTATGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: TFGLCSLSIFIH*SYFGEDGSMPK Trigger: CTTGGGCATAGACCCATCTTCTCCAAAATATGAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS CCA 72 bp | TTCTCTGATGGCGTGGTCTCAGGATGCTGTGCAATCTaGTCTTCTAGAAACTTGCTGTTCAGTTTAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: FSDGVVSGCCAI*SSRNLLFSLEL Trigger: AAGCTCTAAACTGAACAGCAAGTTTCTAGAAGACCAGATTGCACAGCATCCTGAGACCACGCCATCAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS CAA 72 bp | GAAAGTCCTTGGGGACTATTCAACTCCACATTTGGGTaGTGCTCCCTCAGCATCTTCATACACTGCTCATAT | + |
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Preference number: 6 (lower is better) Translates to: ESPWGLFNSTFG*CSLSIFIHCSY Trigger: ATATGAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS CAA 72 bp | GCAATAATTCACCTTGGGGACTATTCAACTCCACATTaGGGTTGTGCTCCCTCAGCATCTTCATACACTGCT | + |
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Preference number: 6 (lower is better) Translates to: AIIHLGDYSTPH*GCAPSASSYTA Trigger: AGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGTGAATTATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS CAA 90 bp | CATTTGGGTTGTGCTCCCTCAGCATCTTCATACACTGCTCATATTTaGGAGAAGATGGGTCTATGCCCAAGACACTCAGGTCATAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HLGCAPSASSYTAHI*EKMGLCPRHSGHKN Trigger: ATTCTTATGACCTGAGTGTCTTGGGCATAGACCCATCTTCTCCAAAATATGAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS GCA 72 bp | AGTCCTTGGGGACTATTCAACTCCACATTTGGGTTGTaGTCCCTCAGCATCTTCATACACTGCTCATATTTT | + |
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Preference number: 6 (lower is better) Translates to: SPWGLFNSTFGL*SLSIFIHCSYF Trigger: AAAATATGAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116363.2 |
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| CDS GCA 72 bp | TCACCTTGGGGACTATTCAACTCCACATTTGGGTTGTaGTCCCTCAGCATCTTCATACACTGCTCATATTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPWGLFNSTFGL*SLSIFIHCSYF Trigger: AAAATATGAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS CCA 72 bp | GTACAAAGTGATAAGCGTAATAGTTCTCTGATGGCGTaGTCTCAGGATGCTGTGCAATCTGGTCTTCTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VQSDKRNSSLMA*SQDAVQSGLLE Trigger: TTCTAGAAGACCAGATTGCACAGCATCCTGAGACCACGCCATCAGAGAACTATTACGCTTATCACTTTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS CAA 72 bp | AATTCACCTTGGGGACTATTCAACTCCACATTTGGGTaGTGCTCCCTCAGCATCTTCATACACTGCTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: NSPWGLFNSTFG*CSLSIFIHCSY Trigger: ATATGAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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| CDS CCA 72 bp | CAGCATCTTCATACACTGCTCATATTTTGGAGAAGATaGGTCTATGCCCAAGACACTCAGGTCATAAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: QHLHTLLIFWRR*VYAQDTQVIRI Trigger: GATTCTTATGACCTGAGTGTCTTGGGCATAGACCCATCTTCTCCAAAATATGAGCAGTGTATGAAGATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116363.2 ENSMUST00000146338.8 |
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| CDS CAA 90 bp | CAAAGCAATAATTCACCTTGGGGACTATTCAACTCCACATTTGGGTaGTGCTCCCTCAGCATCTTCATACACTGCTCATATTTTGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QSNNSPWGLFNSTFG*CSLSIFIHCSYFGE Trigger: TTCTCCAAAATATGAGCAGTGTATGAAGATGCTGAGGGAGCACAACCCAAATGTGGAGTTGAATAGTCCCCAAGGTGAATTATTGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146338.8 |
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