Pregenerated sensors for ADORA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000562Ensembl transcript IDs: ENSMUST00000000574.3, ENSMUST00000164730.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCAGAAGCAAGCAGAAGGAATGCCAAGAGCAGTCAACTGTGCCTaGAACCCCCAAGCAATCCTAGCAAAGAGCTACACATCAGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: SQKQAEGMPRAVNCA*NPQAILAKSYTSVG Trigger: CCCAACTGATGTGTAGCTCTTTGCTAGGATTGCTTGGGGGTTGCAGGCACAGTTGACTGCTCTTGGCATTCCTTCTGCTTGCTTCTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| 3UTR GCA 90 bp | TGTGTCCCAGAAGCAAGCAGAAGGAATGCCAAGAGCAGTCAACTGTaGCTGCAACCCCCAAGCAATCCTAGCAAAGAGCTACACATCAGT | + |
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Preference number: 1 (lower is better) Translates to: CVPEASRRNAKSSQL*LQPPSNPSKELHIS Trigger: ACTGATGTGTAGCTCTTTGCTAGGATTGCTTGGGGGTTGCAGGCACAGTTGACTGCTCTTGGCATTCCTTCTGCTTGCTTCTGGGACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| 3UTR GCA 90 bp | CTTCTTTGTCTGGGAAGGAAGGGCAGAGTCCGTGGTAATCAGGGATaGATTGCCTTCACGTCAGGCTTCCACAGAATTGAATTAGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: LLCLGRKGRVRGNQG*IAFTSGFHRIELEK Trigger: CTTCTCTAATTCAATTCTGTGGAAGCCTGACGTGAAGGCAATGCATCCCTGATTACCACGGACTCTGCCCTTCCTTCCCAGACAAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR GCA 90 bp | AATCCTAGCAAAGAGCTACACATCAGTTGGGCATCATCTTTTATTTaGTCAAATGCACCCACACAGGTGGATTTAGCCCTCTTTTTAAAT | + |
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Preference number: 1 (lower is better) Translates to: NPSKELHISWASSFI*SNAPTQVDLALFLN Trigger: ATTTAAAAAGAGGGCTAAATCCACCTGTGTGGGTGCATTTGAGCAAATAAAAGATGATGCCCAACTGATGTGTAGCTCTTTGCTAGGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| 3UTR-3UTR TCA 90 bp | TACTTCTTTGTCTGGGAAGGAAGGGCAGAGTCCGTGGTAATCAGGGATGCATTGTGGCAACCAGCCCGATaGTCCCAATGCAGTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: YFFVWEGRAESVVIRDALWQPAR*SQCSEG Trigger: TCCTTCACTGCATTGGGATCATCGGGCTGGTTGCCA...CAATGCATCCCTGATTACCACGGACTCTGCCCTTCCTTCCCAGACAAAGAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCAATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCCGAAGGCAGACGAGCTaGCTCTGTATCTGTCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: IQFAPSVPHIPGILRSRFRRQTS*LCICQG Trigger: ACCTTGACAGATACAGAGCCAGCTCGTCTGCCTTCG...GAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAATTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR-3UTR CCA 90 bp | TACTTCTTTGTCTGGGAAGGAAGGGCAGAGTCCGTGGTAATCAGGGATGCATTGCGAAGGCAGACGAGCTaGCTCTGTATCTGTCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: YFFVWEGRAESVVIRDALRRQTS*LCICQG Trigger: ACCTTGACAGATACAGAGCCAGCTCGTCTGCCTTCG...CAATGCATCCCTGATTACCACGGACTCTGCCCTTCCTTCCCAGACAAAGAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCTGTACCATTACTTCTTTGTCTaGGAAGGAAGGGCAGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: IRSFCSPHSRDPSEQVLYHYFFV*EGRAES Trigger: GGACTCTGCCCTTCCTTCCCAGACAAAGAAGTAATG...GTACAGAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCAATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCATGATCCCAATGCAGTaGAGGAAGCAAGAATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: IQFAPSVPHIPGILRSRFMIPMQ*RKQECL Trigger: CAGACATTCTTGCTTCCTTCACTGCATTGGGATCAT...GAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAATTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCAATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTGCTCAAGAAAATAACTaGAGCAGAAGGAGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: NSIRSFCSPHSRDPSEQVAQENN*SRRREE Trigger: CTCCTCCCTCCTTCTGCTTCAGTTATTTTCTTGAGC...AACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAATTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR-3UTR TCA 90 bp | TACTTCTTTGTCTGGGAAGGAAGGGCAGAGTCCGTGGTAATCAGGGATGCATTGATGATCCCAATGCAGTaGAGGAAGCAAGAATGTCTG | + |
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Preference number: 2 (lower is better) Translates to: YFFVWEGRAESVVIRDALMIPMQ*RKQECL Trigger: CAGACATTCTTGCTTCCTTCACTGCATTGGGATCAT...CAATGCATCCCTGATTACCACGGACTCTGCCCTTCCTTCCCAGACAAAGAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCAATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTAGGCTTCCACAGAATTaGATTAGAGAAGCTCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: NSIRSFCSPHSRDPSEQVRLPQN*IREAQE Trigger: TTCTTGAGCTTCTCTAATTCAATTCTGTGGAAGCCT...AACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAATTGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR GCA 72 bp | CAAGCAGAAGGAATGCCAAGAGCAGTCAACTGTGCCTaGAACCCCCAAGCAATCCTAGCAAAGAGCTACACA | + |
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Preference number: 3 (lower is better) Translates to: QAEGMPRAVNCA*NPQAILAKSYT Trigger: TGTGTAGCTCTTTGCTAGGATTGCTTGGGGGTTGCAGGCACAGTTGACTGCTCTTGGCATTCCTTCTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| 3UTR GCA 72 bp | GAAGCAAGCAGAAGGAATGCCAAGAGCAGTCAACTGTaGCTGCAACCCCCAAGCAATCCTAGCAAAGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: EASRRNAKSSQL*LQPPSNPSKEL Trigger: TAGCTCTTTGCTAGGATTGCTTGGGGGTTGCAGGCACAGTTGACTGCTCTTGGCATTCCTTCTGCTTGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| 3UTR GCA 72 bp | CTGAAGTTGCCTAGGATTTCAAGAACATCAGAACCTTaGATAACAGACATCCTGCCCCCGACCCCCAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: LKLPRISRTSEP*ITDILPPTPRG Trigger: TCCTCTGGGGGTCGGGGGCAGGATGTCTGTTATGCAAGGTTCTGATGTTCTTGAAATCCTAGGCAACTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| 3UTR CCA 72 bp | GACGAGACTCCCTCCACATTCCATTACTTCTTTGTCTaGGAAGGAAGGGCAGAGTCCGTGGTAATCAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: DETPSTFHYFFV*EGRAESVVIRD Trigger: ATCCCTGATTACCACGGACTCTGCCCTTCCTTCCCAGACAAAGAAGTAATGGAATGTGGAGGGAGTCTCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR-3UTR CAA 90 bp | TGCACCCACACAGGTGGATTTAGCCCTCTTTTTAAATTCAATTCGCTCCTTCTGGTAATCAGGGATGCATaGCCTTCACGTCAGGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: CTHTGGFSPLFKFNSLLLVIRDA*PSRQAS Trigger: GGAAGCCTGACGTGAAGGCAATGCATCCCTGATTAC...CAGAAGGAGCGAATTGAATTTAAAAAGAGGGCTAAATCCACCTGTGTGGGTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR TCA 72 bp | AAGCAAGAATGTCTGATAAGTCCTTATAGTGTTTACTaGTACCACATGCGAAGGCAGACGAGCTGGCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: KQECLISPYSVY*YHMRRQTSWLC Trigger: ACAGAGCCAGCTCGTCTGCCTTCGCATGTGGTATCAGTAAACACTATAAGGACTTATCAGACATTCTTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR GCA 72 bp | AAAGAGCTACACATCAGTTGGGCATCATCTTTTATTTaGTCAAATGCACCCACACAGGTGGATTTAGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: KELHISWASSFI*SNAPTQVDLAL Trigger: GAGGGCTAAATCCACCTGTGTGGGTGCATTTGAGCAAATAAAAGATGATGCCCAACTGATGTGTAGCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS-3UTR CCA 90 bp | CTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCTGTACGTCCAGCCCCAATCATGGAGTTCGCGTaGGACAACAGGATCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LFPTFQGSFGAGSVRPAPIMEFA*DNRIPR Trigger: CCTGGGGATCCTGTTGTCCCACGCGAACTCCATGAT...TGGGGCTGGACGTACAGAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR CCA 90 bp | TTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCTGTACGTCCAGCCCATCATGGAGTTCGCGTaGGACAACAGGATCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FCSPHSRDPSEQVLYVQPIMEFA*DNRIPR Trigger: CCTGGGGATCCTGTTGTCCCACGCGAACTCCATGAT...GGGCTGGACGTACAGAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR TCA 90 bp | TTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCTGTACGTCCAGCCCATGCACGCGTCTCTCTaGAGCCAGACAGGTTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: FCSPHSRDPSEQVLYVQPMHASL*SQTGFD Trigger: GTCAAAACCTGTCTGGCTTCAGAGAGACGCGTGCAT...GGGCTGGACGTACAGAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR GCA 90 bp | TTCAATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCTCTCCCGTCCATAAAATaGACGCGTCTCTCTGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: FNSLLLFPTFQGSFGAGSLPSIK*TRLSEA Trigger: GGCTTCAGAGAGACGCGTGCATTTTATGGACGGGAG...AGAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAATTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR CCA 90 bp | ATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCTGTACACCACGGAACGGAAGTaGCACAAAAGAGTGCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: IRSFCSPHSRDPSEQVLYTTERK*HKRVLL Trigger: TAGCAGCACTCTTTTGTGCCACTTCCGTTCCGTGGT...GTACAGAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR TCA 90 bp | ATTCAATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCGCAGCACACAGGACATaGAAAGGCAGGCATAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: IQFAPSVPHIPGILRSRFAAHRT*KGRHRS Trigger: ACTTCTATGCCTGCCTTTTCATGTCCTGTGTGCTGC...GAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAATTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS-3UTR TCA 90 bp | TCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCTGTACGTAAGCCAGACAGGTTTTaGCTGAGCTTATTTCGGATG | + |
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Preference number: 4 (lower is better) Translates to: SLLLFPTFQGSFGAGSVRKPDRF*LSLFRM Trigger: CATCCGAAATAAGCTCAGTCAAAACCTGTCTGGCTT...ACGTACAGAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR GCA 90 bp | AATTCAATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCTCCCGTCCATAAAATaGACGCGTCTCTCTGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: NSIRSFCSPHSRDPSEQVLPSIK*TRLSEA Trigger: GGCTTCAGAGAGACGCGTGCATTTTATGGACGGGAG...AACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAATTGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR TCA 90 bp | GGTTCTGTACGTCCAGCCCCACTAGAGTTTTCCTTTGATAAGACGAGACTCCCTAAAGAATCTGAGGTCTaGCAGAGCCTGAGAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: GSVRPAPLEFSFDKTRLPKESEV*QSLRAL Trigger: CAGAGCTCTCAGGCTCTGTCAGACCTCAGATTCTTT...AGGGAGTCTCGTCTTATCAAAGGAAAACTCTAGTGGGGCTGGACGTACAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR TCA 90 bp | TACTTCTTTGTCTGGGAAGGAAGGGCAGAGTCCGTGGTAATCAGGGATGCATTGAAAGAATCTGAGGTCTaGCAGAGCCTGAGAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: YFFVWEGRAESVVIRDALKESEV*QSLRAL Trigger: CAGAGCTCTCAGGCTCTGTCAGACCTCAGATTCTTT...CAATGCATCCCTGATTACCACGGACTCTGCCCTTCCTTCCCAGACAAAGAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR GCA 90 bp | CAGGGATCCTTCGGAGCAGGTTCTGTACGTCCAGCCCCACTAGAGTTTTCCTTTGGCACAAAAGAGTGCTaGTATTTTGAGAGCTCGCTA | + |
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Preference number: 4 (lower is better) Translates to: QGSFGAGSVRPAPLEFSFGTKEC*YFESSL Trigger: TAGCGAGCTCTCAAAATAGCAGCACTCTTTTGTGCC...AAAGGAAAACTCTAGTGGGGCTGGACGTACAGAACCTGCTCCGAAGGATCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR GCA 90 bp | CAGGGATCCTTCGGAGCAGGTTCTGTACGTCCAGCCCCACTAGAGTTTTCCTTTAGTGGCACAAAAGAGTaGTGCTATTTTGAGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: QGSFGAGSVRPAPLEFSFSGTKE*CYFESS Trigger: CGAGCTCTCAAAATAGCAGCACTCTTTTGTGCCACT...AAAGGAAAACTCTAGTGGGGCTGGACGTACAGAACCTGCTCCGAAGGATCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR CCA 90 bp | TTCAATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCTGACATGATGGAAGCATaGGTGAAGATCAGCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: FNSLLLFPTFQGSFGAGSDMMEA*VKISST Trigger: TGTGCTGCTGATCTTCACCCATGCTTCCATCATGTC...AGAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAATTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS-3UTR CCA 90 bp | TACTTCTTTGTCTGGGAAGGAAGGGCAGAGTCCGTGGTAATCAGGGATGCATTGACCACGGAACGGAAGTaGCACAAAAGAGTGCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: YFFVWEGRAESVVIRDALTTERK*HKRVLL Trigger: TAGCAGCACTCTTTTGTGCCACTTCCGTTCCGTGGT...CAATGCATCCCTGATTACCACGGACTCTGCCCTTCCTTCCCAGACAAAGAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR GCA 90 bp | TACTTCTTTGTCTGGGAAGGAAGGGCAGAGTCCGTGGTAATCAGGGATGCATTGGGCACAAAAGAGTGCTaGTATTTTGAGAGCTCGCTA | + |
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Preference number: 4 (lower is better) Translates to: YFFVWEGRAESVVIRDALGTKEC*YFESSL Trigger: TAGCGAGCTCTCAAAATAGCAGCACTCTTTTGTGCC...CAATGCATCCCTGATTACCACGGACTCTGCCCTTCCTTCCCAGACAAAGAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR GCA 90 bp | GCACCCACACAGGTGGATTTAGCCCTCTTTTTAAATTCAATTCGCTCCTTCTGTAAGTGCATCTTGACTTaGAGGCTGACAGCAATGGCC | + |
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Preference number: 4 (lower is better) Translates to: APTQVDLALFLNSIRSFCKCILT*RLTAMA Trigger: GGCCATTGCTGTCAGCCTGCAAGTCAAGATGCACTT...ACAGAAGGAGCGAATTGAATTTAAAAAGAGGGCTAAATCCACCTGTGTGGGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS-3UTR TCA 90 bp | TTCACGTCAGGCTTCCACAGAATTGAATTAGAGAAGCTCAAGAAAATAACTGAACAATGGCCAAAGGTGTaGCCAGCACCCCAACGGCAA | + |
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Preference number: 4 (lower is better) Translates to: FTSGFHRIELEKLKKITEQWPKV*PAPQRQ Trigger: TTGCCGTTGGGGTGCTGGTCACACCTTTGGCCATTG...TTCAGTTATTTTCTTGAGCTTCTCTAATTCAATTCTGTGGAAGCCTGACGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS-3UTR TCA 90 bp | CCTTTGATAAGACGAGACTCCCTCCACATTCCATTACTTCTTTGTCTGGGAAGGAAGCCAGACAGGTTTTaGCTGAGCTTATTTCGGATG | + |
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Preference number: 4 (lower is better) Translates to: PLIRRDSLHIPLLLCLGRKPDRF*LSLFRM Trigger: CATCCGAAATAAGCTCAGTCAAAACCTGTCTGGCTT...CCTTCCCAGACAAAGAAGTAATGGAATGTGGAGGGAGTCTCGTCTTATCAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR GCA 90 bp | TGCACCCACACAGGTGGATTTAGCCCTCTTTTTAAATTCAATTCGCTCCTTCTGAGTGGCACAAAAGAGTaGTGCTATTTTGAGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: CTHTGGFSPLFKFNSLLLSGTKE*CYFESS Trigger: CGAGCTCTCAAAATAGCAGCACTCTTTTGTGCCACT...CAGAAGGAGCGAATTGAATTTAAAAAGAGGGCTAAATCCACCTGTGTGGGTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| 3UTR CAA 72 bp | ACAACAAACAAATCTCCAGTTGTCCTGAAGCTGAAGTaGCCTAGGATTTCAAGAACATCAGAACCTTGCATA | + |
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Preference number: 4 (lower is better) Translates to: TTNKSPVVLKLK*PRISRTSEPCI Trigger: TATGCAAGGTTCTGATGTTCTTGAAATCCTAGGCAACTTCAGCTTCAGGACAACTGGAGATTTGTTTGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS-3UTR CAA 90 bp | TTCAATTCGCTCCTTCTGTTCCCCACATTCCAGGGATCCTTCGGAGCAGGTTCTCAGATGACCAGCATGTaGCCCACAACGGCACAGAGC | + |
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Preference number: 5 (lower is better) Translates to: FNSLLLFPTFQGSFGAGSQMTSM*PTTAQS Trigger: GCTCTGTGCCGTTGTGGGCAACATGCTGGTCATCTG...AGAACCTGCTCCGAAGGATCCCTGGAATGTGGGGAACAGAAGGAGCGAATTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS-3UTR CAA 90 bp | GGTTCTGTACGTCCAGCCCCACTAGAGTTTTCCTTTGATAAGACGAGACTCCCTGGATCCCCAGGCACATaGCGACATCTGGTATCTTTA | + |
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Preference number: 5 (lower is better) Translates to: GSVRPAPLEFSFDKTRLPGSPGT*RHLVSL Trigger: TAAAGATACCAGATGTCGCAATGTGCCTGGGGATCC...AGGGAGTCTCGTCTTATCAAAGGAAAACTCTAGTGGGGCTGGACGTACAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTCTTAGTGTCAGTGTTCTCAAATGTCCTGTTCCAGACTTACAAAGCACTAGAGTGGGGTTCAGCTaGACCACCCAGATGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: VCLSVSVLKCPVPDLQSTRVGFS*TTQMTS Trigger: GCTGGTCATCTGGGTGGTCAAGCTGAACCCCACTCT...AGTGCTTTGTAAGTCTGGAACAGGACATTTGAGAACACTGACACTAAGACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS TCA 90 bp | AAGGAAACTAGCCAGCAAAGGCCCAAGAATAGCCATATTCTTCTTTaGGTGGTAACCGTTCTATATCTGACTGTCAGCTTGACCCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: KETSQQRPKNSHILL*VVTVLYLTVSLTRR Trigger: CCTGCGGGTCAAGCTGACAGTCAGATATAGAACGGTTACCACTCAAAGAAGAATATGGCTATTCTTGGGCCTTTGCTGGCTAGTTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS GCA 90 bp | AACCAGAAACAGGGACTTAGCTGTCTTGAACTCCCGTCCATAAAATaGACGCGTCTCTCTGAAGCCAGACAGGTTTTGACTGAGCTTATT | + |
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Preference number: 5 (lower is better) Translates to: NQKQGLSCLELPSIK*TRLSEARQVLTELI Trigger: AATAAGCTCAGTCAAAACCTGTCTGGCTTCAGAGAGACGCGTGCATTTTATGGACGGGAGTTCAAGACAGCTAAGTCCCTGTTTCTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS-3UTR CAA 90 bp | ATCTTTTATTTGCTCAAATGCACCCACACAGGTGGATTTAGCCCTCTTTTTAAAGGATCCCCAGGCACATaGCGACATCTGGTATCTTTA | + |
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Preference number: 5 (lower is better) Translates to: IFYLLKCTHTGGFSPLFKGSPGT*RHLVSL Trigger: TAAAGATACCAGATGTCGCAATGTGCCTGGGGATCC...TTTAAAAAGAGGGCTAAATCCACCTGTGTGGGTGCATTTGAGCAAATAAAAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS CAA 72 bp | GTGGGGTTCAGCTTGACCACCCAGATGACCAGCATGTaGCCCACAACGGCACAGAGCCCGATGGCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VGFSLTTQMTSM*PTTAQSPMAAS Trigger: GGAGGCTGCCATCGGGCTCTGTGCCGTTGTGGGCAACATGCTGGTCATCTGGGTGGTCAAGCTGAACCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS CAA 90 bp | GTCCTCAGAGTGGGGTTCAGCTTGACCACCCAGATGACCAGCATGTaGCCCACAACGGCACAGAGCCCGATGGCAGCCTCCATGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: VLRVGFSLTTQMTSM*PTTAQSPMAASMVM Trigger: CATCACCATGGAGGCTGCCATCGGGCTCTGTGCCGTTGTGGGCAACATGCTGGTCATCTGGGTGGTCAAGCTGAACCCCACTCTGAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS TCA 72 bp | CCCCAACGGCAATGTCAGCCAGTGCTAGGGAGACAATaGAATAGAACGTGGTGGTCCTCAGAGTGGGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PQRQCQPVLGRQ*NRTWWSSEWGS Trigger: TGAACCCCACTCTGAGGACCACCACGTTCTATTTCATTGTCTCCCTAGCACTGGCTGACATTGCCGTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000574.3 |
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| CDS GCA 72 bp | CAGGGACTTAGCTGTCTTGAACTCCCGTCCATAAAATaGACGCGTCTCTCTGAAGCCAGACAGGTTTTGACT | + |
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Preference number: 6 (lower is better) Translates to: QGLSCLELPSIK*TRLSEARQVLT Trigger: AGTCAAAACCTGTCTGGCTTCAGAGAGACGCGTGCATTTTATGGACGGGAGTTCAAGACAGCTAAGTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS GCA 72 bp | GGAGTTCGCGTGGGACAACAGGATCCCCAGGCACATTaGGACATCTGGTATCTTTACATCAAAATAGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: GVRVGQQDPQAH*DIWYLYIKIGN Trigger: GTTTCCTATTTTGATGTAAAGATACCAGATGTCGCAATGTGCCTGGGGATCCTGTTGTCCCACGCGAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS CAA 72 bp | TGGAGTTCGCGTGGGACAACAGGATCCCCAGGCACATaGCGACATCTGGTATCTTTACATCAAAATAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: WSSRGTTGSPGT*RHLVSLHQNRK Trigger: TTTCCTATTTTGATGTAAAGATACCAGATGTCGCAATGTGCCTGGGGATCCTGTTGTCCCACGCGAACTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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| CDS CAA 72 bp | ATAAAATGCACGCGTCTCTCTGAAGCCAGACAGGTTTaGACTGAGCTTATTTCGGATGATGTAGAAGATGTC | + |
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Preference number: 6 (lower is better) Translates to: IKCTRLSEARQV*TELISDDVEDV Trigger: GACATCTTCTACATCATCCGAAATAAGCTCAGTCAAAACCTGTCTGGCTTCAGAGAGACGCGTGCATTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000574.3 ENSMUST00000164730.2 |
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