Pregenerated sensors for ADORA2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018500Ensembl transcript IDs: ENSMUST00000018644.3
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTAGGATAGAATCATTCCCTAAATTAATACTACTGTATCTTGACTaGAGATTTATACTTCAGTTTTCTGAGTTGCTGCCCCAGGAACAA | + |
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Preference number: 1 (lower is better) Translates to: LRIESFPKLILLYLD*RFILQFSELLPQEQ Trigger: TTGTTCCTGGGGCAGCAACTCAGAAAACTGAAGTATAAATCTTCAGTCAAGATACAGTAGTATTAATTTAGGGAATGATTCTATCCTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| 3UTR-3UTR TCA 90 bp | AAAACCCAGTACCTAGCTCTAAAGCAGGTTCCAGTAGAGGAAGGACTTCGTCTCTATACTTCAGTTTTCTaGGTTGCTGCCCCAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: KTQYLALKQVPVEEGLRLYTSVF*VAAPGT Trigger: TGTTCCTGGGGCAGCAACTCAGAAAACTGAAGTATA...GAGACGAAGTCCTTCCTCTACTGGAACCTGCTTTAGAGCTAGGTACTGGGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| 3UTR-3UTR CCA 90 bp | AGGACTTCGTCTCTCCAGTTTCTACCTCTAGTGTTTTGTGTACTGGGAAAATATGACGGGCCATTTGCTTaGGAGGTGCAGCTGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: RTSSLQFLPLVFCVLGKYDGPFA*EVQLSF Trigger: GAAAGACAGCTGCACCTCCCAAGCAAATGGCCCGTC...ATATTTTCCCAGTACACAAAACACTAGAGGTAGAAACTGGAGAGACGAAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| 3UTR CAA 90 bp | TTTGCTTGGGAGGTGCAGCTGTCTTTCACAGTGAGGATCGGCCAGTaGTGTCTAGTCCCATTGTTTATTTTAAGCCTTCTTCTCCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: FAWEVQLSFTVRIGQ*CLVPLFILSLLLQK Trigger: CTTTTGGAGAAGAAGGCTTAAAATAAACAATGGGACTAGACACAACTGGCCGATCCTCACTGTGAAAGACAGCTGCACCTCCCAAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| 3UTR GCA 72 bp | TTGACTGAAGATTTATACTTCAGTTTTCTGAGTTGCTaGCCCAGGAACAAGTATTCATTAGTAGAGCCAACT | + |
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Preference number: 3 (lower is better) Translates to: LTEDLYFSFLSC*PRNKYSLVEPT Trigger: AGTTGGCTCTACTAATGAATACTTGTTCCTGGGGCAGCAACTCAGAAAACTGAAGTATAAATCTTCAGTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR GCA 90 bp | GACTTGTGTAACTCCAGGCAAGCATTCAGGGGAGACGGGCCATTTGCTTGGGAGTCCCACGGCCACGTCTaGCGTCGCCAGGGATACCAG | + |
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Preference number: 4 (lower is better) Translates to: DLCNSRQAFRGDGPFAWESHGHV*RRQGYQ Trigger: CTGGTATCCCTGGCGACGGCAGACGTGGCCGTGGGA...CTCCCAAGCAAATGGCCCGTCTCCCCTGAATGCTTGCCTGGAGTTACACAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR TCA 90 bp | CATGTCAGCCAGACTTGTGTAACTCCAGGCAAGCATTCAGGGGAGACGGGCCATCCCAGAGGACAGCAATaGTCCCTCTCGCTCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HVSQTCVTPGKHSGETGHPRGQQ*SLSLVS Trigger: GGACACGAGCGAGAGGGATCATTGCTGTCCTCTGGG...ATGGCCCGTCTCCCCTGAATGCTTGCCTGGAGTTACACAAGTCTGGCTGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CCA 90 bp | GAGGTGCAGCTGTCTTTCACAGTGAGGATCGGCCAGTTGTGTCTAGTCCCATTGGCGTGGATCTCCCGCTaGAGAGTGGTCCTGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: EVQLSFTVRIGQLCLVPLAWISR*RVVLEW Trigger: CCACTCCAGGACCACTCTCCAGCGGGAGATCCACGC...CAATGGGACTAGACACAACTGGCCGATCCTCACTGTGAAAGACAGCTGCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CCA 90 bp | GAGGTGCAGCTGTCTTTCACAGTGAGGATCGGCCAGTTGTGTCTAGTCCCATTGGCCCACTCCCACCCTTaGTCTCGGCCTGGCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: EVQLSFTVRIGQLCLVPLAHSHP*SRPGRE Trigger: TTCTCTGCCAGGCCGAGACCAAGGGTGGGAGTGGGC...CAATGGGACTAGACACAACTGGCCGATCCTCACTGTGAAAGACAGCTGCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| 3UTR CAA 72 bp | CTCCAGGCAAGCATTCAGGGGAGACGGGCCATTTGCTaGGGAGGTGCAGCTGTCTTTCACAGTGAGGATCGG | + |
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Preference number: 4 (lower is better) Translates to: LQASIQGRRAIC*GGAAVFHSEDR Trigger: CCGATCCTCACTGTGAAAGACAGCTGCACCTCCCAAGCAAATGGCCCGTCTCCCCTGAATGCTTGCCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR GCA 90 bp | AAGCAAAACCCAGTACCTAGCTCTAAAGCAGGTTCCAGTAGAGGAAGGACTTCGGACTGCGCCCCAGCCTaGCCACTCCCACCCTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: KQNPVPSSKAGSSRGRTSDCAPA*PLPPLV Trigger: GACCAAGGGTGGGAGTGGGCAGGCTGGGGCGCAGTC...CGAAGTCCTTCCTCTACTGGAACCTGCTTTAGAGCTAGGTACTGGGTTTTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CCA 90 bp | CATGTCAGCCAGACTTGTGTAACTCCAGGCAAGCATTCAGGGGAGACGGGCCATAGTGACTTGGCTGCGTaGATCTCCCGCTGGAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: HVSQTCVTPGKHSGETGHSDLAA*ISRWRV Trigger: CACTCTCCAGCGGGAGATCCACGCAGCCAAGTCACT...ATGGCCCGTCTCCCCTGAATGCTTGCCTGGAGTTACACAAGTCTGGCTGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CCA 90 bp | GACTTGTGTAACTCCAGGCAAGCATTCAGGGGAGACGGGCCATTTGCTTGGGAGACTTGGGCTTGTCCTTaGCCAGGGCTGGATGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DLCNSRQAFRGDGPFAWETWACP*PGLDGR Trigger: TCTTCCATCCAGCCCTGGCCAAGGACAAGCCCAAGT...CTCCCAAGCAAATGGCCCGTCTCCCCTGAATGCTTGCCTGGAGTTACACAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CCA 90 bp | GTCAGCCAGACTTGTGTAACTCCAGGCAAGCATTCAGGGGAGACGGGCCATTTGCATTCATCACCCACTTaGGCTTGTCCTTGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VSQTCVTPGKHSGETGHLHSSPT*ACPWPG Trigger: CCCTGGCCAAGGACAAGCCCAAGTGGGTGATGAATG...CAAATGGCCCGTCTCCCCTGAATGCTTGCCTGGAGTTACACAAGTCTGGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CCA 90 bp | CAGTACCTAGCTCTAAAGCAGGTTCCAGTAGAGGAAGGACTTCGTCTCTCCAGTAGGAAGAGGCAGCCGTaGAAGTCCGTGCAGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QYLALKQVPVEEGLRLSSRKRQP*KSVQKP Trigger: GGGCTTCTGCACGGACTTCCACGGCTGCCTCTTCCT...ACTGGAGAGACGAAGTCCTTCCTCTACTGGAACCTGCTTTAGAGCTAGGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CCA 90 bp | AGGGGAGACGGGCCATTTGCTTGGGAGGTGCAGCTGTCTTTCACAGTGAGGATCCTGTGCAGTTGCTGGTaGCACTGTCTTTACTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RGDGPFAWEVQLSFTVRILCSCW*HCLYCS Trigger: GGAACAGTAAAGACAGTGCCACCAGCAACTGCACAG...GATCCTCACTGTGAAAGACAGCTGCACCTCCCAAGCAAATGGCCCGTCTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR TCA 90 bp | GACTTGTGTAACTCCAGGCAAGCATTCAGGGGAGACGGGCCATTTGCTTGGGAGAGATCACCAGCATTATaGGCAGTGGAGGAAGGACAC | + |
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Preference number: 4 (lower is better) Translates to: DLCNSRQAFRGDGPFAWERSPAL*AVEEGH Trigger: GTGTCCTTCCTCCACTGCTCATAATGCTGGTGATCT...CTCCCAAGCAAATGGCCCGTCTCCCCTGAATGCTTGCCTGGAGTTACACAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CCA 90 bp | GTCAGCCAGACTTGTGTAACTCCAGGCAAGCATTCAGGGGAGACGGGCCATTTGGTTGATGGCATGCACTaGGAGCCAACACAGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: VSQTCVTPGKHSGETGHLVDGMH*EPTQSK Trigger: TTTGCTCTGTGTTGGCTCCCAGTGCATGCCATCAAC...CAAATGGCCCGTCTCCCCTGAATGCTTGCCTGGAGTTACACAAGTCTGGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR TCA 90 bp | CAAAACCCAGTACCTAGCTCTAAAGCAGGTTCCAGTAGAGGAAGGACTTCGTCTATCAGTTCCATGCGCTaGAGCTGCTTGCAGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: QNPVPSSKAGSSRGRTSSISSMR*SCLQAT Trigger: GGTGGCCTGCAAGCAGCTTCAGCGCATGGAACTGAT...AGACGAAGTCCTTCCTCTACTGGAACCTGCTTTAGAGCTAGGTACTGGGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR TCA 90 bp | AAGCAAAACCCAGTACCTAGCTCTAAAGCAGGTTCCAGTAGAGGAAGGACTTCGCACGATCATAGCCAGTaGCTTGGCTGCGTGGATCTC | + |
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Preference number: 4 (lower is better) Translates to: KQNPVPSSKAGSSRGRTSHDHSQ*LGCVDL Trigger: GAGATCCACGCAGCCAAGTCACTGGCTATGATCGTG...CGAAGTCCTTCCTCTACTGGAACCTGCTTTAGAGCTAGGTACTGGGTTTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR TCA 90 bp | CCACGGAGCCTCCAATTTGCATGTCAGCCAGACTTGTGTAACTCCAGGCAAGCACATAGACAATGGGGTTaGCAACTGAATTGGCATGTG | + |
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Preference number: 4 (lower is better) Translates to: PRSLQFACQPDLCNSRQAHRQWG*QLNWHV Trigger: CACATGCCAATTCAGTTGTCAACCCCATTGTCTATG...TGCTTGCCTGGAGTTACACAAGTCTGGCTGACATGCAAATTGGAGGCTCCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR TCA 90 bp | GTCAGCCAGACTTGTGTAACTCCAGGCAAGCATTCAGGGGAGACGGGCCATTTGGAACATATCTGGAGATaGTCTTGTGGAAACTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VSQTCVTPGKHSGETGHLEHIWR*SCGNCS Trigger: GCTACAGTTTCCACAAGATCATCTCCAGATATGTTC...CAAATGGCCCGTCTCCCCTGAATGCTTGCCTGGAGTTACACAAGTCTGGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR GCA 90 bp | AGATTCTTAAACAGTTTTCCGGAATCAATTCAAGCTGCCACCACCATCCACACAGGTCCATCAGTTCCATaGGCTGAAGCTGCTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RFLNSFPESIQAATTIHTGPSVP*AEAACR Trigger: CCTGCAAGCAGCTTCAGCGCATGGAACTGATGGACC...TGTGTGGATGGTGGTGGCAGCTTGAATTGATTCCGGAAAACTGTTTAAGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR GCA 90 bp | TTGACTGAAGATTTATACTTCAGTTTTCTGAGTTGCTGCCCCAGGAACAAGTATAGACTGAGAGTAGACTaGGCCCCAGCCTGCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: LTEDLYFSFLSCCPRNKYRLRVD*APACPL Trigger: GAGTGGGCAGGCTGGGGCGCAGTCTACTCTCAGTCT...ATACTTGTTCCTGGGGCAGCAACTCAGAAAACTGAAGTATAAATCTTCAGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CCA 90 bp | AGCAAAACCCAGTACCTAGCTCTAAAGCAGGTTCCAGTAGAGGAAGGACTTCGTCAGCATTATGAGCAGTaGAGGAAGGACACACCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SKTQYLALKQVPVEEGLRQHYEQ*RKDTPK Trigger: TTTGGGTGTGTCCTTCCTCCACTGCTCATAATGCTG...ACGAAGTCCTTCCTCTACTGGAACCTGCTTTAGAGCTAGGTACTGGGTTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR GCA 90 bp | AGGACTTCGTCTCTCCAGTTTCTACCTCTAGTGTTTTGTGTACTGGGAAAATATCATCCCCCAGTTCTGTaGAGTTGCTGGTGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: RTSSLQFLPLVFCVLGKYHPPVL*SCWWHC Trigger: ACAGTGCCACCAGCAACTGCACAGAACTGGGGGATG...ATATTTTCCCAGTACACAAAACACTAGAGGTAGAAACTGGAGAGACGAAGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR GCA 90 bp | TACTTCAGTTTTCTGAGTTGCTGCCCCAGGAACAAGTATTCATTAGTAGAGCCACCAGTTCTGTGCAGTTaGTGGTGGCACTGTCTTTAC | + |
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Preference number: 4 (lower is better) Translates to: YFSFLSCCPRNKYSLVEPPVLCS*WWHCLY Trigger: GTAAAGACAGTGCCACCAGCAACTGCACAGAACTGG...TGGCTCTACTAATGAATACTTGTTCCTGGGGCAGCAACTCAGAAAACTGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| 3UTR CAA 72 bp | GAGGTGCAGCTGTCTTTCACAGTGAGGATCGGCCAGTaGTGTCTAGTCCCATTGTTTATTTTAAGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: EVQLSFTVRIGQ*CLVPLFILSLL Trigger: AAGAAGGCTTAAAATAAACAATGGGACTAGACACAACTGGCCGATCCTCACTGTGAAAGACAGCTGCACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CCA 90 bp | AGATTTATACTTCAGTTTTCTGAGTTGCTGCCCCAGGAACAAGTATTCATTAGTTTGGCCAGGGCTGGATaGAAGAGGGTGATACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: RFILQFSELLPQEQVFISLARAG*KRVIQL Trigger: CAACTGTATCACCCTCTTCCATCCAGCCCTGGCCAA...ACTAATGAATACTTGTTCCTGGGGCAGCAACTCAGAAAACTGAAGTATAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS CCA 90 bp | GTCCCACGGCCACGTCTGCCGTCGCCAGGGATACCAGAAAGTAGTTaGTGGGGGTCTGTAATGCACTCGAGGCTCCCACCGCGGCGCACA | + |
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Preference number: 5 (lower is better) Translates to: VPRPRLPSPGIPESS*WGSVMHSRLPPRRT Trigger: TGTGCGCCGCGGTGGGAGCCTCGAGTGCATTACAGACCCCCACCAACTACTTTCTGGTATCCCTGGCGACGGCAGACGTGGCCGTGGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CAA 90 bp | GACTTGTGTAACTCCAGGCAAGCATTCAGGGGAGACGGGCCATTTGCTTGGGAGGCGCACACCAGCACGTaGCCCGCCACCGCCAGCGCA | + |
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Preference number: 5 (lower is better) Translates to: DLCNSRQAFRGDGPFAWEAHTST*PATASA Trigger: TGCGCTGGCGGTGGCGGGCAACGTGCTGGTGTGCGC...CTCCCAAGCAAATGGCCCGTCTCCCCTGAATGCTTGCCTGGAGTTACACAAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CAA 90 bp | CATGTCAGCCAGACTTGTGTAACTCCAGGCAAGCATTCAGGGGAGACGGGCCATATCATAGCCAGTGACTaGGCTGCGTGGATCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: HVSQTCVTPGKHSGETGHIIASD*AAWISR Trigger: GCGGGAGATCCACGCAGCCAAGTCACTGGCTATGAT...ATGGCCCGTCTCCCCTGAATGCTTGCCTGGAGTTACACAAGTCTGGCTGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS TCA 90 bp | CACTCCCACCCTTGGTCTCGGCCTGGCAGAGAACATATCTGGAGATaGTCTTGTGGAAACTGTAGCGGAAGTCTCGGTTCCTGTAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: HSHPWSRPGREHIWR*SCGNCSGSLGSCRH Trigger: ATGCCTACAGGAACCGAGACTTCCGCTACAGTTTCCACAAGATCATCTCCAGATATGTTCTCTGCCAGGCCGAGACCAAGGGTGGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CAA 90 bp | GAGGTGCAGCTGTCTTTCACAGTGAGGATCGGCCAGTTGTGTCTAGTCCCATTGCCCAGTTCTGTGCAGTaGCTGGTGGCACTGTCTTTA | + |
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Preference number: 5 (lower is better) Translates to: EVQLSFTVRIGQLCLVPLPSSVQ*LVALSL Trigger: TAAAGACAGTGCCACCAGCAACTGCACAGAACTGGG...CAATGGGACTAGACACAACTGGCCGATCCTCACTGTGAAAGACAGCTGCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CAA 90 bp | AGCAAAACCCAGTACCTAGCTCTAAAGCAGGTTCCAGTAGAGGAAGGACTTCGTATCACCCACTTGGGCTaGTCCTTGGCCAGGGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: SKTQYLALKQVPVEEGLRITHLG*SLARAG Trigger: TCCAGCCCTGGCCAAGGACAAGCCCAAGTGGGTGAT...ACGAAGTCCTTCCTCTACTGGAACCTGCTTTAGAGCTAGGTACTGGGTTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CAA 90 bp | AGATTTATACTTCAGTTTTCTGAGTTGCTGCCCCAGGAACAAGTATTCATTAGTCACTTGGGCTTGTCCTaGGCCAGGGCTGGATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RFILQFSELLPQEQVFISHLGLS*ARAGWK Trigger: CTTCCATCCAGCCCTGGCCAAGGACAAGCCCAAGTG...ACTAATGAATACTTGTTCCTGGGGCAGCAACTCAGAAAACTGAAGTATAAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS-3UTR CAA 90 bp | AGGACTTCGTCTCTCCAGTTTCTACCTCTAGTGTTTTGTGTACTGGGAAAATATGGGTTGACAACTGAATaGGCATGTGACAGGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: RTSSLQFLPLVFCVLGKYGLTTE*ACDRRM Trigger: CATCCTCCTGTCACATGCCAATTCAGTTGTCAACCC...ATATTTTCCCAGTACACAAAACACTAGAGGTAGAAACTGGAGAGACGAAGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS GCA 72 bp | CATAAGCCCAGACTGAGAGTAGACTGCGCCCCAGCCTaGCCACTCCCACCCTTGGTCTCGGCCTGGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HKPRLRVDCAPA*PLPPLVSAWQR Trigger: TCTCTGCCAGGCCGAGACCAAGGGTGGGAGTGGGCAGGCTGGGGCGCAGTCTACTCTCAGTCTGGGCTTATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS CCA 72 bp | CATGTGACAGGAGGATGGCCACATTCATCACCCACTTaGGCTTGTCCTTGGCCAGGGCTGGATGGAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: HVTGGWPHSSPT*ACPWPGLDGRG Trigger: CCCTCTTCCATCCAGCCCTGGCCAAGGACAAGCCCAAGTGGGTGATGAATGTGGCCATCCTCCTGTCACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS CAA 90 bp | ACTGAATTGGCATGTGACAGGAGGATGGCCACATTCATCACCCACTaGGGCTTGTCCTTGGCCAGGGCTGGATGGAAGAGGGTGATACAG | + |
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Preference number: 6 (lower is better) Translates to: TELACDRRMATFITH*GLSLARAGWKRVIQ Trigger: CTGTATCACCCTCTTCCATCCAGCCCTGGCCAAGGACAAGCCCAAGTGGGTGATGAATGTGGCCATCCTCCTGTCACATGCCAATTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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| CDS GCA 72 bp | AGAGACATGTCACAGGACAGCAGCTTTTATTCGCGATaGCATCCCCCAGTTCTGTGCAGTTGCTGGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RDMSQDSSFYSR*HPPVLCSCWWH Trigger: GTGCCACCAGCAACTGCACAGAACTGGGGGATGGCATCGCGAATAAAAGCTGCTGTCCTGTGACATGTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018644.3 |
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