Pregenerated sensors for ADORA2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020178Ensembl transcript IDs: ENSMUST00000105420.3, ENSMUST00000219044.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCGCCCCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTTaGTGCTCCCGCAGAGTGGGAGCCGGGCACCCAGTGGGTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PPPQAFLTGLHAAPA*CSRRVGAGHPVGFL Trigger: CAGGAAACCCACTGGGTGCCCGGCTCCCACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGCGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR GCA 90 bp | GGACGCTTCTGGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATGCTaGTGTAGCCCTGACCTAACTCGGGGCCCTATAGACCGAAGCATC | + |
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Preference number: 1 (lower is better) Translates to: GRFWSRGTGPCLRRC*CSPDLTRGPIDRSI Trigger: GATGCTTCGGTCTATAGGGCCCCGAGTTAGGTCAGGGCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR GCA 90 bp | TGTGGACGCTTCTGGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATaGTGCTGTAGCCCTGACCTAACTCGGGGCCCTATAGACCGAAGC | + |
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Preference number: 1 (lower is better) Translates to: CGRFWSRGTGPCLRR*CCSPDLTRGPIDRS Trigger: GCTTCGGTCTATAGGGCCCCGAGTTAGGTCAGGGCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 90 bp | TTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAGAGTaGGAGCCGGGCACCCAGTGGGTTTCCTGGCGTGGGCGTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: FLLGFMLLQLDAPAE*EPGTQWVSWRGRFF Trigger: GAAGAAACGCCCACGCCAGGAAACCCACTGGGTGCCCGGCTCCCACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 90 bp | CCTATAGACCGAAGCATCGCCTCCTCCGCCCCAGGCCTTTCTTACTaGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAGAGTGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: PIDRSIASSAPGLSY*ASCCSSLMLPQSGS Trigger: GCTCCCACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGCGGAGGAGGCGATGCTTCGGTCTATAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 90 bp | CAGCTTGGGCTAACCCGAGAGGACCGTCTGCAATTCCTTGGTGGGTaGGGTGTGGAGGGGAGAGTCACAGCAGGATCGACCACAGACCCA | + |
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Preference number: 1 (lower is better) Translates to: QLGLTREDRLQFLGG*GVEGRVTAGSTTDP Trigger: TGGGTCTGTGGTCGATCCTGCTGTGACTCTCCCCTCCACACCCCACCCACCAAGGAATTGCAGACGGTCCTCTCGGGTTAGCCCAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 90 bp | AGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTTGTGGACGCTTCTaGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATGCTGCTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: SHSCSTRQGSSCGRF*SRGTGPCLRRCCCS Trigger: GCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 90 bp | CAGGCCTCTAAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTTGTaGACGCTTCTGGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATG | + |
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Preference number: 1 (lower is better) Translates to: QASKPQLLYKARQLL*TLLEQGNWALPSKM Trigger: CATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTTAGAGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR GCA 90 bp | TCTTCCAGCCCAGCTTTATTAGCGGGAGATAGCCCTGTGACTGAGTaGATGGCAGCTTGGGCTAACCCGAGAGGACCGTCTGCAATTCCT | + |
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Preference number: 1 (lower is better) Translates to: SSSPALLAGDSPVTE*MAAWANPRGPSAIP Trigger: AGGAATTGCAGACGGTCCTCTCGGGTTAGCCCAAGCTGCCATGCACTCAGTCACAGGGCTATCTCCCGCTAATAAAGCTGGGCTGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR-3UTR CCA 90 bp | CCGAAGCATCGCCTCCTCCGCCCCAGGCCTTTCTTACTGGGCTTCATGCTGCTCGATGCTCCCGCAGAGTaGGAGCCGGGCACCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PKHRLLRPRPFLLGFMLLDAPAE*EPGTQW Trigger: CCACTGGGTGCCCGGCTCCCACTCTGCGGGAGCATC...GAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGCGGAGGAGGCGATGCTTCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CAA 90 bp | TCCTCCGCCCCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTaGATGCTCCCGCAGAGTGGGAGCCGGGCACCCAGTGGGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSAPGLSYWASCCSS*MLPQSGSRAPSGFP Trigger: AGGAAACCCACTGGGTGCCCGGCTCCCACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGCGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CAA 90 bp | GGCCAGGCCTCTAAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTaGTGGACGCTTCTGGAGCAGGGGAACTGGGCCCTGCCTTCGAAG | + |
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Preference number: 2 (lower is better) Translates to: GQASKPQLLYKARQL*WTLLEQGNWALPSK Trigger: CTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTTAGAGGCCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCAGCCCAGCTTTATTAGCGGGAGATAGCCCTGTGACTGAGTGCATGGCATTGGTGGGTGGGGTGTaGAGGGGAGAGTCACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSSPALLAGDSPVTECMALVGGV*RGESQQ Trigger: CTGCTGTGACTCTCCCCTCCACACCCCACCCACCAA...TGCCATGCACTCAGTCACAGGGCTATCTCCCGCTAATAAAGCTGGGCTGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CAA 90 bp | CCTCCCCACAGGGCAGCTCTGAACTATCCAGCTCGGGTCCATGACTaGATGTCTCTAAACTCAATCCTGAGACGTGAGCCCACACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PPHRAALNYPARVHD*MSLNSILRREPTLW Trigger: CCAGAGTGTGGGCTCACGTCTCAGGATTGAGTTTAGAGACATCAAGTCATGGACCCGAGCTGGATAGTTCAGAGCTGCCCTGTGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCAGGCCTCTAAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTTGTGGATGCCTTCGAAGATGCTaGTGTAGCCCTGACCTAACT | + |
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Preference number: 2 (lower is better) Translates to: QARPLSHSCSTRQGSSCGCLRRC*CSPDLT Trigger: AGTTAGGTCAGGGCTACAGCAGCATCTTCGAAGGCA...TCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTTAGAGGCCTGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR TCA 72 bp | CAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTTaGTGCTCCCGCAGAGTGGGAGCCGGGCACCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: QAFLTGLHAAPA*CSRRVGAGHPV Trigger: CACTGGGTGCCCGGCTCCCACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 72 bp | CGAAGCATCGCCTCCTCCGCCCCAGGCCTTTCTTACTaGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAG | + |
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Preference number: 3 (lower is better) Translates to: RSIASSAPGLSY*ASCCSSLMLPQ Trigger: CTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGCGGAGGAGGCGATGCTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR GCA 72 bp | TGGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATGCTaGTGTAGCCCTGACCTAACTCGGGGCCCTATAGAC | + |
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Preference number: 3 (lower is better) Translates to: WSRGTGPCLRRC*CSPDLTRGPID Trigger: GTCTATAGGGCCCCGAGTTAGGTCAGGGCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 72 bp | AAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTTGTaGACGCTTCTGGAGCAGGGGAACTGGGCCCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: KPQLLYKARQLL*TLLEQGNWALP Trigger: AGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 72 bp | GAGAGGACCGTCTGCAATTCCTTGGTGGGTGGGGTGTaGAGGGGAGAGTCACAGCAGGATCGACCACAGACC | + |
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Preference number: 3 (lower is better) Translates to: ERTVCNSLVGGV*RGESQQDRPQT Trigger: GGTCTGTGGTCGATCCTGCTGTGACTCTCCCCTCCACACCCCACCCACCAAGGAATTGCAGACGGTCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR GCA 72 bp | TTCTGGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATaGTGCTGTAGCCCTGACCTAACTCGGGGCCCTATA | + |
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Preference number: 3 (lower is better) Translates to: FWSRGTGPCLRR*CCSPDLTRGPI Trigger: TATAGGGCCCCGAGTTAGGTCAGGGCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 72 bp | TGCTCTACAAGGCAAGGCAGCTCTTGTGGACGCTTCTaGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATGC | + |
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Preference number: 3 (lower is better) Translates to: CSTRQGSSCGRF*SRGTGPCLRRC Trigger: GCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCCACAAGAGCTGCCTTGCCTTGTAGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR GCA 72 bp | TCTTGTGGACGCTTCTGGAGCAGGGGAACTGGGCCCTaGCTTCGAAGATGCTGCTGTAGCCCTGACCTAACT | + |
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Preference number: 3 (lower is better) Translates to: SCGRFWSRGTGP*LRRCCCSPDLT Trigger: AGTTAGGTCAGGGCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCCACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 72 bp | CCCGCAGAGTGGGAGCCGGGCACCCAGTGGGTTTCCTaGCGTGGGCGTTTCTTCTCTTCTCTTAATGAGATT | + |
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Preference number: 3 (lower is better) Translates to: PAEWEPGTQWVS*RGRFFSSLNEI Trigger: AATCTCATTAAGAGAAGAGAAGAAACGCCCACGCCAGGAAACCCACTGGGTGCCCGGCTCCCACTCTGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR-3UTR CAA 90 bp | TCTTCCAGCCCAGCTTTATTAGCGGGAGATAGCCCTGTGACTGAGTGCATGGCAACCGTCTGCAATTCCTaGGTGGGTGGGGTGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SSSPALLAGDSPVTECMATVCNS*VGGVWR Trigger: CCTCCACACCCCACCCACCAAGGAATTGCAGACGGT...TGCCATGCACTCAGTCACAGGGCTATCTCCCGCTAATAAAGCTGGGCTGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR GCA 72 bp | CCAGCTTTATTAGCGGGAGATAGCCCTGTGACTGAGTaGATGGCAGCTTGGGCTAACCCGAGAGGACCGTCT | + |
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Preference number: 3 (lower is better) Translates to: PALLAGDSPVTE*MAAWANPRGPS Trigger: AGACGGTCCTCTCGGGTTAGCCCAAGCTGCCATGCACTCAGTCACAGGGCTATCTCCCGCTAATAAAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CCA 72 bp | TCTCTAAACTCAATCCTGAGACGTGAGCCCACACTCTaGCACCCTGCCTTTCATAGTTTCTGTCTTCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SLNSILRREPTL*HPAFHSFCLPA Trigger: GGCTGGAAGACAGAAACTATGAAAGGCAGGGTGCCAGAGTGTGGGCTCACGTCTCAGGATTGAGTTTAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR TCA 90 bp | GGGTGTGGAGGGGAGAGTCACAGCAGGATCGACCACAGACCCAGCAGCCAGGGAGGACGTGGGTTCGGATaGTCTTCCGGAAGGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GCGGESHSRIDHRPSSQGGRGFG*SSGRSG Trigger: GCCAGACCTTCCGGAAGATCATCCGAACCCACGTCC...TCCCTGGCTGCTGGGTCTGTGGTCGATCCTGCTGTGACTCTCCCCTCCACACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR TCA 90 bp | CTAACCCGAGAGGACCGTCTGCAATTCCTTGGTGGGTGGGGTGTGGAGGGGAGATGGAACCCCCTGCCCTaGAGGGTTCCTGCCGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LTREDRLQFLGGWGVEGRWNPLP*RVPAAS Trigger: TGAGGCGGCAGGAACCCTTCAGGGCAGGGGGTTCCA...TCTCCCCTCCACACCCCACCCACCAAGGAATTGCAGACGGTCCTCTCGGGTTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAGTCCCCAGGAGACCCTTaGGTGCTCCCTCCACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: APGLSYWASCCSSLMLPQSPGDP*VLPPPP Trigger: GGGAGGTGGAGGGAGCACCCAAGGGTCTCCTGGGGA...CTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR GCA 90 bp | CAGGCCAGGCCTCTAAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTTGTGGAGGCACTGGAACCCCCTaGCCTGAAGGGTTCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: QARPLSHSCSTRQGSSCGGTGTP*PEGFLP Trigger: CGGCAGGAACCCTTCAGGGCAGGGGGTTCCAGTGCC...TCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTTAGAGGCCTGGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | GGACGCTTCTGGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATGCTGCTGTAGCGATGGTGATGGCGAATaGGATGGCGAGCACGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GRFWSRGTGPCLRRCCCSDGDGE*DGEHAH Trigger: GTGGGCGTGCTCGCCATCCCATTCGCCATCACCATC...GCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | CCGAAGCATCGCCTCCTCCGCCCCAGGCCTTTCTTACTGGGCTTCATGCTGCTCTGCCGCCTCAGGACGTaGGTTCGGATGATCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: PKHRLLRPRPFLLGFMLLCRLRT*VRMIFR Trigger: CCGGAAGATCATCCGAACCCACGTCCTGAGGCGGCA...GAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGCGGAGGAGGCGATGCTTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CAA 72 bp | CCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTaGATGCTCCCGCAGAGTGGGAGCCGGGCACCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PGLSYWASCCSS*MLPQSGSRAPS Trigger: ACTGGGTGCCCGGCTCCCACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | TTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAGAGTGGGAGCCGTGGGGGTCAGGCCGATaGCGAATGACAGCACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLLGFMLLQLDAPAEWEPWGSGR*RMTAPS Trigger: GCTGGGTGCTGTCATTCGCCATCGGCCTGACCCCCA...CGGCTCCCACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | TGGGCTAACCCGAGAGGACCGTCTGCAATTCCTTGGTGGGTGGGGTGTGGAGGGAGGGACTTGGCGGCGTaGACTTCCTTCTGCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: WANPRGPSAIPWWVGCGGRDLAA*TSFCSV Trigger: CACACTGCAGAAGGAAGTCCACGCCGCCAAGTCCCT...CCCTCCACACCCCACCCACCAAGGAATTGCAGACGGTCCTCTCGGGTTAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | TTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAGAGTGGGAGCCGCATACTCCCAGGGGGTaGCCATTGAGGCGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FLLGFMLLQLDAPAEWEPHTPRG*PLRRRL Trigger: CAGCCTCCGCCTCAATGGCCACCCCCTGGGAGTATG...CGGCTCCCACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | AGCAGGGGAACTGGGCCCTGCCTTCGAAGATGCTGCTGTAGCCCTGACCTAACTGGGGAGCACTCCCATTaGCCCATACTCCCAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SRGTGPCLRRCCCSPDLTGEHSH*PILPGG Trigger: ACCCCCTGGGAGTATGGGCCAATGGGAGTGCTCCCC...AGTTAGGTCAGGGCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR TCA 90 bp | CAGGCCAGGCCTCTAAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTTGTGGAGGTAGATGGCCAGCATaGGCAGGAGGGGGAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: QARPLSHSCSTRQGSSCGGRWPA*AGGGAT Trigger: TGTTGCTCCCCCTCCTGCTCATGCTGGCCATCTACC...TCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTTAGAGGCCTGGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR TCA 90 bp | TCTTCCAGCCCAGCTTTATTAGCGGGAGATAGCCCTGTGACTGAGTGCATGGCATCGCCCTCAGTGCTGTaGGCCGCCAAGGCCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SSSPALLAGDSPVTECMASPSVL*AAKAQA Trigger: TGCCTGGGCCTTGGCGGCTCACAGCACTGAGGGCGA...TGCCATGCACTCAGTCACAGGGCTATCTCCCGCTAATAAAGCTGGGCTGGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR GCA 90 bp | CTTGGGCTAACCCGAGAGGACCGTCTGCAATTCCTTGGTGGGTGGGGTGTGGAGGGTTGGCTCTCCATCTaGTTCAGCTGTCTCCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LGLTREDRLQFLGGWGVEGWLSI*FSCLRA Trigger: AGCCCGGAGACAGCTGAAGCAGATGGAGAGCCAACC...CTCCACACCCCACCCACCAAGGAATTGCAGACGGTCCTCTCGGGTTAGCCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAGTCCCCTGGTAGGGGTTaGCTCTCCATCTGCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: APGLSYWASCCSSLMLPQSPGRG*LSICFS Trigger: GCTGAAGCAGATGGAGAGCCAACCCCTACCAGGGGA...CTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| 3UTR CAA 72 bp | TCTAAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTaGTGGACGCTTCTGGAGCAGGGGAACTGGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SKPQLLYKARQL*WTLLEQGNWAL Trigger: CAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR TCA 90 bp | CCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAGAGTCAGGCCGATGGCGAATaGCAGCACCCAGCAAATCGC | + |
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Preference number: 4 (lower is better) Translates to: PGLSYWASCCSSLMLPQSQADGE*QHPANR Trigger: GCGATTTGCTGGGTGCTGTCATTCGCCATCGGCCTG...ACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR GCA 90 bp | GGACGCTTCTGGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATGCTGCTGTAGCAAGCAGTTGATGATGTaGAGGGGCAACCAGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GRFWSRGTGPCLRRCCCSKQLMM*RGNQQR Trigger: CCTCTGCTGGTTGCCCCTGCACATCATCAACTGCTT...GCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR TCA 90 bp | CCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAGAGTTCTGCAGGTTGCTGTTaGTCCACACGGCCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: PGLSYWASCCSSLMLPQSSAGCC*STRPST Trigger: TGTGCTGGGCCGTGTGGATCAACAGCAACCTGCAGA...ACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR TCA 90 bp | GCCCCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAGCCACGAAGAAGTTGGTaGCGTTCTGCAGGTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: APGLSYWASCCSSLMLPQPRRSW*RSAGCC Trigger: ACAGCAACCTGCAGAACGTCACCAACTTCTTCGTGG...CTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | AGGCAGCTCTTGTGGACGCTTCTGGAGCAGGGGAACTGGGCCCTGCCTTCGAAGCGCCGCAGGTCTTTGTaGAGTTCTCATCTTTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: RQLLWTLLEQGNWALPSKRRRSL*SSHLSD Trigger: GTCAGAAAGATGAGAACTCCACAAAGACCTGCGGCG...CTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCCACAAGAGCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | TCCGCCCCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCCTTCCTGGTGCTCCTaGGTAAGAAGCTCTACATCC | + |
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Preference number: 4 (lower is better) Translates to: SAPGLSYWASCCSSLMLPPSWCS*VRSSTS Trigger: GGATGTAGAGCTTCTTACCCAGGAGCACCAGGAAGG...CGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR GCA 90 bp | GGACGCTTCTGGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATGCTGCTGTAGCAAGTTGGTGACGTTCTaGAGGTTGCTGTTGATCCAC | + |
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Preference number: 4 (lower is better) Translates to: GRFWSRGTGPCLRRCCCSKLVTF*RLLLIH Trigger: GTGGATCAACAGCAACCTGCAGAACGTCACCAACTT...GCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | TCTTCCAGCCCAGCTTTATTAGCGGGAGATAGCCCTGTGACTGAGTGCATGGCACAAGGAGGGGCGTGCTaGCACGTGGAGCAGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSSPALLAGDSPVTECMAQGGAC*HVEQKK Trigger: CTTCTTCTGCTCCACGTGCCAGCACGCCCCTCCTTG...TGCCATGCACTCAGTCACAGGGCTATCTCCCGCTAATAAAGCTGGGCTGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR TCA 90 bp | ACCCAGTGGGTTTCCTGGCGTGGGCGTTTCTTCTCTTCTCTTAATGAGATTGGTCAAAGAGCCCCACGATaGTGGCCAGGGACTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TQWVSWRGRFFSSLNEIGQRAPR*WPGTWR Trigger: CCGCCAAGTCCCTGGCCATCATCGTGGGGCTCTTTG...ACCAATCTCATTAAGAGAAGAGAAGAAACGCCCACGCCAGGAAACCCACTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | TCTAAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTTGTGGACGCTTCTGGAGACAACGGAATTGCTGTaGGAGAGGATGATGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SKPQLLYKARQLLWTLLETTELL*ERMMAR Trigger: CCTGGCCATCATCCTCTCCCACAGCAATTCCGTTGT...CTCCAGAAGCGTCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTTAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CCA 90 bp | ACCCAGTGGGTTTCCTGGCGTGGGCGTTTCTTCTCTTCTCTTAATGAGATTGGTGCACGTTACCCAGGATaGCCAGCACAGCAATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TQWVSWRGRFFSSLNEIGARYPG*PAQQWP Trigger: TGGCCATTGCTGTGCTGGCCATCCTGGGTAACGTGC...ACCAATCTCATTAAGAGAAGAGAAGAAACGCCCACGCCAGGAAACCCACTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CCA 90 bp | GCACTGGAACCCCCTGCCCTGAAGGGTTCCTGCCGCCTCAGGACGTaGGTTCGGATGATCTTCCGGAAGGTCTGGCGGAACTCCCGGATC | + |
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Preference number: 5 (lower is better) Translates to: ALEPPALKGSCRLRT*VRMIFRKVWRNSRI Trigger: GATCCGGGAGTTCCGCCAGACCTTCCGGAAGATCATCCGAACCCACGTCCTGAGGCGGCAGGAACCCTTCAGGGCAGGGGGTTCCAGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CAA 90 bp | CGGTCTGGGGAGAGTAGTGTATTAGCAGGAGGCCTGAGGCAGCCATACCCCAGCTGGGGAGCACTCCCATaGGCCCATACTCCCAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: RSGESSVLAGGLRQPYPSWGALP*AHTPRG Trigger: CCCCCTGGGAGTATGGGCCAATGGGAGTGCTCCCCA...GCTGGGGTATGGCTGCCTCAGGCCTCCTGCTAATACACTACTCTCCCCAGACCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS GCA 90 bp | CCCGGCCCTCGCCGCAGGTCTTTGTGGAGTTCTCATCTTTCTGACTaGAGTTGTTCCAGCCCAGCATGGGGGTCAGGCCGATGGCGAATG | + |
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Preference number: 5 (lower is better) Translates to: PGPRRRSLWSSHLSD*SCSSPAWGSGRWRM Trigger: CATTCGCCATCGGCCTGACCCCCATGCTGGGCTGGAACAACTGCAGTCAGAAAGATGAGAACTCCACAAAGACCTGCGGCGAGGGCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CAA 90 bp | CTAACCCGAGAGGACCGTCTGCAATTCCTTGGTGGGTGGGGTGTGGAGGGGAGAGTGACGTTCTGCAGGTaGCTGTTGATCCACACGGCC | + |
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Preference number: 5 (lower is better) Translates to: LTREDRLQFLGGWGVEGRVTFCR*LLIHTA Trigger: GGCCGTGTGGATCAACAGCAACCTGCAGAACGTCAC...TCTCCCCTCCACACCCCACCCACCAAGGAATTGCAGACGGTCCTCTCGGGTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CAA 90 bp | TCTAAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTTGTGGACGCTTCTGGAGATCCCCAGGAGACCCTaGGGTGCTCCCTCCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: SKPQLLYKARQLLWTLLEIPRRP*GAPSTS Trigger: GGAGGTGGAGGGAGCACCCAAGGGTCTCCTGGGGAT...CTCCAGAAGCGTCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS TCA 90 bp | TGGGGGTCAGGCCGATGGCGAATGACAGCACCCAGCAAATCGCAATaGTGCCCTTCGCCCTCATACCCGTCACCAAGCCATTGTACCGGA | + |
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Preference number: 5 (lower is better) Translates to: WGSGRWRMTAPSKSQ*CPSPSYPSPSHCTG Trigger: TCCGGTACAATGGCTTGGTGACGGGTATGAGGGCGAAGGGCATCATTGCGATTTGCTGGGTGCTGTCATTCGCCATCGGCCTGACCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CAA 90 bp | CCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCGCAGAGTATGATGGCCAGGGACTaGGCGGCGTGGACTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PGLSYWASCCSSLMLPQSMMARD*AAWTSF Trigger: GAAGGAAGTCCACGCCGCCAAGTCCCTGGCCATCAT...ACTCTGCGGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CAA 90 bp | GGACGCTTCTGGAGCAGGGGAACTGGGCCCTGCCTTCGAAGATGCTGCTGTAGCGGGTTGACAACGGAATaGCTGTGGGAGAGGATGATG | + |
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Preference number: 5 (lower is better) Translates to: GRFWSRGTGPCLRRCCCSGLTTE*LWERMM Trigger: CATCATCCTCTCCCACAGCAATTCCGTTGTCAACCC...GCTACAGCAGCATCTTCGAAGGCAGGGCCCAGTTCCCCTGCTCCAGAAGCGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CCA 90 bp | CGTCCTCAAACAGACAGGTCACCCGGCCCTCGCCGCAGGTCTTTGTaGAGTTCTCATCTTTCTGACTGCAGTTGTTCCAGCCCAGCATGG | + |
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Preference number: 5 (lower is better) Translates to: RPQTDRSPGPRRRSL*SSHLSDCSCSSPAW Trigger: CCATGCTGGGCTGGAACAACTGCAGTCAGAAAGATGAGAACTCCACAAAGACCTGCGGCGAGGGCCGGGTGACCTGTCTGTTTGAGGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CAA 90 bp | CTCCGCCCCAGGCCTTTCTTACTGGGCTTCATGCTGCTCCAGCTTGATGCTCCCAAGAAGGTGAAGCAGTaGATGATGTGCAGGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: LRPRPFLLGFMLLQLDAPKKVKQ*MMCRGN Trigger: GTTGCCCCTGCACATCATCAACTGCTTCACCTTCTT...GGGAGCATCAAGCTGGAGCAGCATGAAGCCCAGTAAGAAAGGCCTGGGGCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS GCA 90 bp | ATGTCAGCCGCCGCCAGAGATACCACGAAGAAGTTGGTGACGTTCTaGAGGTTGCTGTTGATCCACACGGCCCAGCACACAAGCACGTTA | + |
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Preference number: 5 (lower is better) Translates to: MSAAARDTTKKLVTF*RLLLIHTAQHTSTL Trigger: TAACGTGCTTGTGTGCTGGGCCGTGTGGATCAACAGCAACCTGCAGAACGTCACCAACTTCTTCGTGGTATCTCTGGCGGCGGCTGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105420.3 ENSMUST00000219044.2 |
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| CDS-3UTR CAA 90 bp | CCTCTAAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTTGTGGACGCTTCTGGCCTCGCCGCAGGTCTTaGTGGAGTTCTCATCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PLSHSCSTRQGSSCGRFWPRRRS*WSSHLS Trigger: AGAAAGATGAGAACTCCACAAAGACCTGCGGCGAGG...CCAGAAGCGTCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTTAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CCA 90 bp | GATGCCCTTCGCCCTCATACCCGTCACCAAGCCATTGTACCGGAGTaGAATTCGGATGGCGATGTATCTGTCGATGGCAATAGCCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: DALRPHTRHQAIVPE*NSDGDVSVDGNSQE Trigger: CTCTTGGCTATTGCCATCGACAGATACATCGCCATCCGAATTCCACTCCGGTACAATGGCTTGGTGACGGGTATGAGGGCGAAGGGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS-3UTR CAA 90 bp | TCTAAGCCACAGCTGCTCTACAAGGCAAGGCAGCTCTTGTGGACGCTTCTGGAGGATACCACGAAGAAGTaGGTGACGTTCTGCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: SKPQLLYKARQLLWTLLEDTTKK*VTFCRL Trigger: CAACCTGCAGAACGTCACCAACTTCTTCGTGGTATC...CTCCAGAAGCGTCCACAAGAGCTGCCTTGCCTTGTAGAGCAGCTGTGGCTTAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CCA 90 bp | GGAGCAACACAAAAGCGAAGAAGTTGTAGTAAACCATGTAATTCATaGGTACCACGTCCTCAAACAGACAGGTCACCCGGCCCTCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GATQKRRSCSKPCNS*VPRPQTDRSPGPRR Trigger: GCGGCGAGGGCCGGGTGACCTGTCTGTTTGAGGACGTGGTACCCATGAATTACATGGTTTACTACAACTTCTTCGCTTTTGTGTTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS GCA 72 bp | GCCCAGGCACTGGAACCCCCTGCCCTGAAGGGTTCCTaGCGCCTCAGGACGTGGGTTCGGATGATCTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: AQALEPPALKGS*RLRTWVRMIFR Trigger: CCGGAAGATCATCCGAACCCACGTCCTGAGGCGGCAGGAACCCTTCAGGGCAGGGGGTTCCAGTGCCTGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CCA 72 bp | TGGGGAGCACTCCCATTGGCCCATACTCCCAGGGGGTaGCCATTGAGGCGGAGGCTGACCTGCTCGCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: WGALPLAHTPRG*PLRRRLTCSPS Trigger: TGAGGGCGAGCAGGTCAGCCTCCGCCTCAATGGCCACCCCCTGGGAGTATGGGCCAATGGGAGTGCTCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CCA 72 bp | CCCCCTGCCCTGAAGGGTTCCTGCCGCCTCAGGACGTaGGTTCGGATGATCTTCCGGAAGGTCTGGCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PPALKGSCRLRT*VRMIFRKVWRN Trigger: GTTCCGCCAGACCTTCCGGAAGATCATCCGAACCCACGTCCTGAGGCGGCAGGAACCCTTCAGGGCAGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS GCA 72 bp | ATGATGGCCAGGGACTTGGCGGCGTGGACTTCCTTCTaGAGTGTGGAGCGAGTCCGCTCCCCTGGTAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: MMARDLAAWTSF*SVERVRSPGRG Trigger: ACCCCTACCAGGGGAGCGGACTCGCTCCACACTGCAGAAGGAAGTCCACGCCGCCAAGTCCCTGGCCATCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CCA 72 bp | AAGAGCCCCACGATGATGGCCAGGGACTTGGCGGCGTaGACTTCCTTCTGCAGTGTGGAGCGAGTCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KSPTMMARDLAA*TSFCSVERVRS Trigger: GGAGCGGACTCGCTCCACACTGCAGAAGGAAGTCCACGCCGCCAAGTCCCTGGCCATCATCGTGGGGCTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CAA 90 bp | ACGCCCACCGCGATGTCAGCCGCCGCCAGAGATACCACGAAGAAGTaGGTGACGTTCTGCAGGTTGCTGTTGATCCACACGGCCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: TPTAMSAAARDTTKK*VTFCRLLLIHTAQH Trigger: GTGCTGGGCCGTGTGGATCAACAGCAACCTGCAGAACGTCACCAACTTCTTCGTGGTATCTCTGGCGGCGGCTGACATCGCGGTGGGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105420.3 ENSMUST00000219044.2 |
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| CDS CCA 72 bp | CCTAGGCCAGGGTGCTCTTGCCCTTCCTGGTGCTCCTaGGTAAGAAGCTCTACATCCCCAGGAGACCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PRPGCSCPSWCS*VRSSTSPGDPW Trigger: CCAAGGGTCTCCTGGGGATGTAGAGCTTCTTACCCAGGAGCACCAGGAAGGGCAAGAGCACCCTGGCCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS TCA 72 bp | GGCCGATGGCGAATGACAGCACCCAGCAAATCGCAATaGTGCCCTTCGCCCTCATACCCGTCACCAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GRWRMTAPSKSQ*CPSPSYPSPSH Trigger: ATGGCTTGGTGACGGGTATGAGGGCGAAGGGCATCATTGCGATTTGCTGGGTGCTGTCATTCGCCATCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS GCA 72 bp | CGCCGCAGGTCTTTGTGGAGTTCTCATCTTTCTGACTaGAGTTGTTCCAGCCCAGCATGGGGGTCAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: RRRSLWSSHLSD*SCSSPAWGSGR Trigger: TCGGCCTGACCCCCATGCTGGGCTGGAACAACTGCAGTCAGAAAGATGAGAACTCCACAAAGACCTGCGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS GCA 72 bp | AGGATGATGGCCAGGTACATGAGCCAAGGAGGGGCGTaGTGGCACGTGGAGCAGAAGAAGGTGAAGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: RMMARYMSQGGA*WHVEQKKVKQL Trigger: CAACTGCTTCACCTTCTTCTGCTCCACGTGCCAGCACGCCCCTCCTTGGCTCATGTACCTGGCCATCATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CAA 90 bp | GCCAGAGATACCACGAAGAAGTTGGTGACGTTCTGCAGGTTGCTGTaGATCCACACGGCCCAGCACACAAGCACGTTACCCAGGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: ARDTTKKLVTFCRLL*IHTAQHTSTLPRMA Trigger: GGCCATCCTGGGTAACGTGCTTGTGTGCTGGGCCGTGTGGATCAACAGCAACCTGCAGAACGTCACCAACTTCTTCGTGGTATCTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105420.3 ENSMUST00000219044.2 |
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| CDS GCA 72 bp | GCCGCCAGAGATACCACGAAGAAGTTGGTGACGTTCTaGAGGTTGCTGTTGATCCACACGGCCCAGCACACA | + |
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Preference number: 6 (lower is better) Translates to: AARDTTKKLVTF*RLLLIHTAQHT Trigger: TGTGTGCTGGGCCGTGTGGATCAACAGCAACCTGCAGAACGTCACCAACTTCTTCGTGGTATCTCTGGCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105420.3 ENSMUST00000219044.2 |
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| CDS CCA 72 bp | ACAGACAGGTCACCCGGCCCTCGCCGCAGGTCTTTGTaGAGTTCTCATCTTTCTGACTGCAGTTGTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TDRSPGPRRRSL*SSHLSDCSCSS Trigger: GCTGGAACAACTGCAGTCAGAAAGATGAGAACTCCACAAAGACCTGCGGCGAGGGCCGGGTGACCTGTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CAA 72 bp | GCGATGTCAGCCGCCGCCAGAGATACCACGAAGAAGTaGGTGACGTTCTGCAGGTTGCTGTTGATCCACACG | + |
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Preference number: 6 (lower is better) Translates to: AMSAAARDTTKK*VTFCRLLLIHT Trigger: CGTGTGGATCAACAGCAACCTGCAGAACGTCACCAACTTCTTCGTGGTATCTCTGGCGGCGGCTGACATCGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105420.3 ENSMUST00000219044.2 |
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| CDS CCA 72 bp | CGCCCTCATACCCGTCACCAAGCCATTGTACCGGAGTaGAATTCGGATGGCGATGTATCTGTCGATGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: RPHTRHQAIVPE*NSDGDVSVDGN Trigger: ATTGCCATCGACAGATACATCGCCATCCGAATTCCACTCCGGTACAATGGCTTGGTGACGGGTATGAGGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CAA 72 bp | ATGATGCCCTTCGCCCTCATACCCGTCACCAAGCCATaGTACCGGAGTGGAATTCGGATGGCGATGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: MMPFALIPVTKP*YRSGIRMAMYL Trigger: CAGATACATCGCCATCCGAATTCCACTCCGGTACAATGGCTTGGTGACGGGTATGAGGGCGAAGGGCATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CAA 90 bp | CAAATCGCAATGATGCCCTTCGCCCTCATACCCGTCACCAAGCCATaGTACCGGAGTGGAATTCGGATGGCGATGTATCTGTCGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: QIAMMPFALIPVTKP*YRSGIRMAMYLSMA Trigger: TGCCATCGACAGATACATCGCCATCCGAATTCCACTCCGGTACAATGGCTTGGTGACGGGTATGAGGGCGAAGGGCATCATTGCGATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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| CDS CCA 72 bp | CAAAAGCGAAGAAGTTGTAGTAAACCATGTAATTCATaGGTACCACGTCCTCAAACAGACAGGTCACCCGGC | + |
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Preference number: 6 (lower is better) Translates to: QKRRSCSKPCNS*VPRPQTDRSPG Trigger: GCCGGGTGACCTGTCTGTTTGAGGACGTGGTACCCATGAATTACATGGTTTACTACAACTTCTTCGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105420.3 |
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