RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADNP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053950

Ensembl transcript IDs: ENSMUST00000066743.11

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTGTGGAAGTGTGTaGTTCCTTTTCAGGCTTTCTGAGCACCTGGAACGCCTTGAAGGG +
Preference number: 1 (lower is better)
Translates to: SRKANCREQLICGSV*FLFRLSEHLERLEG
Trigger: CCCTTCAAGGCGTTCCAGGTGCTCAGAAAGCCTGAAAAGGAAGCACACACTTCCACAGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR CCA 90 bp GCTGTTGCTACTGACACTGACACTCGTGGGGAAACAAGGCGTGCATaGAATACCAAAGATTTAATTTACATGACAGAAGGAAAAACTGAA +
Preference number: 1 (lower is better)
Translates to: AVATDTDTRGETRRA*NTKDLIYMTEGKTE
Trigger: TTCAGTTTTTCCTTCTGTCATGTAAATTAAATCTTTGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGTGTCAGTAGCAACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR CCA 90 bp GAGGGATGGTTTGGACCAGAGCTGGCTGGTCCTCATTATCAATTCTaGTGCTGTACATTAGTTCTTATCACAGAAGGAAAAACAAACAAA +
Preference number: 1 (lower is better)
Translates to: EGWFGPELAGPHYQF*CCTLVLITEGKTNK
Trigger: TTTGTTTGTTTTTCCTTCTGTGATAAGAACTAATGTACAGCACCAGAATTGATAATGAGGACCAGCCAGCTCTGGTCCAAACCATCCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR GCA 90 bp ACAGTTTGCACCATAAAGCATTTCTGTTCCTACAGAGACTTTATTTaGAAAGCAACACTTGATTATTACTACACACCAGATCTCAGATTC +
Preference number: 1 (lower is better)
Translates to: TVCTIKHFCSYRDFI*KATLDYYYTPDLRF
Trigger: GAATCTGAGATCTGGTGTGTAGTAATAATCAAGTGTTGCTTTGCAAATAAAGTCTCTGTAGGAACAGAAATGCTTTATGGTGCAAACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR-3UTR CCA 90 bp CTCCTTCCTGCTAGGCTACAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTAACAAGAGTGAGAGGTaGGAATGGGATGTCCAAAGT +
Preference number: 2 (lower is better)
Translates to: LLPARLQATLRKEAPAWFNKSER*EWDVQS
Trigger: ACTTTGGACATCCCATTCCCACCTCTCACTCTTGTT...AAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTGTAGCCTAGCAGGAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR-3UTR TCA 90 bp TCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTAGACACCACTTAGAACAAGAGTaGGAGGTGGGAATGGGATGT +
Preference number: 2 (lower is better)
Translates to: SSVSLGATHIQSTGFSRHHLEQE*EVGMGC
Trigger: ACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTG...GTGTCTAGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR-3UTR GCA 90 bp CTCCTTCCTGCTAGGCTACAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTTGGGGAAACAAGGCGTaGATGGAATACCAAAGATTT +
Preference number: 2 (lower is better)
Translates to: LLPARLQATLRKEAPAWFWGNKA*MEYQRF
Trigger: AAATCTTTGGTATTCCATGCACGCCTTGTTTCCCCA...AAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTGTAGCCTAGCAGGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR-3UTR TCA 90 bp GCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAGGTGGGACAGCACTCAGAGAATaGAAAGCTAATGCTTTCAAG +
Preference number: 2 (lower is better)
Translates to: ATLQCFSEAIKPSYSEGGTALRE*KANAFK
Trigger: CTTGAAAGCATTAGCTTTTCATTCTCTGAGTGCTGT...CCCACCTTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR-3UTR CCA 90 bp TATATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAAGTGAGAGGTGGGAATaGGATGTCCAAAGTCAGCCG +
Preference number: 2 (lower is better)
Translates to: YIATLQCFSEAIKPSYSESERWE*DVQSQP
Trigger: CGGCTGACTTTGGACATCCCATTCCCACCTCTCACT...TTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR-3UTR GCA 90 bp ATGCTTTCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTCAAGTATTTGTAGATTaGAGGCTGTTGCTACTGACA +
Preference number: 2 (lower is better)
Translates to: MLSSVSLGATHIQSTGFSQVFVD*RLLLLT
Trigger: TGTCAGTAGCAACAGCCTGCAATCTACAAATACTTG...AGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR-3UTR CCA 90 bp TCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTAGACACGAAACAAGGCGTGCATaGAATACCAAAGATTTAATT +
Preference number: 2 (lower is better)
Translates to: SSVSLGATHIQSTGFSRHETRRA*NTKDLI
Trigger: AATTAAATCTTTGGTATTCCATGCACGCCTTGTTTC...GTGTCTAGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR TCA 72 bp CCGGGTTCCTCCTTCCTGCTAGGCTACAAGCGACCCTaGGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTC +
Preference number: 3 (lower is better)
Translates to: PGSSFLLGYKRP*GRKHLRGFRLL
Trigger: GAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTGTAGCCTAGCAGGAAGGAGGAACCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR CCA 72 bp GGCCAAACCCCCTGCTTGCTGCGCATCACCGAGGGATaGTTTGGACCAGAGCTGGCTGGTCCTCATTATCAA +
Preference number: 3 (lower is better)
Translates to: GQTPCLLRITEG*FGPELAGPHYQ
Trigger: TTGATAATGAGGACCAGCCAGCTCTGGTCCAAACCATCCCTCGGTGATGCGCAGCAAGCAGGGGGTTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR TCA 72 bp GCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTaGAGGTGGGCCAAACCCCCTGCTTGCTGCGCATCA +
Preference number: 3 (lower is better)
Translates to: AVLLRGHQALIF*RWAKPPACCAS
Trigger: TGATGCGCAGCAAGCAGGGGGTTTGGCCCACCTTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR-3UTR CAA 90 bp TATATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAGGCCAAACCCCCTGCTaGCTGCGCATCACCGAGGGA +
Preference number: 3 (lower is better)
Translates to: YIATLQCFSEAIKPSYSEGQTPC*LRITEG
Trigger: TCCCTCGGTGATGCGCAGCAAGCAGGGGGTTTGGCC...TTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR GCA 72 bp GCGAACTGCAGAGAACAGCTCATCTGTGGAAGTGTGTaGTTCCTTTTCAGGCTTTCTGAGCACCTGGAACGC +
Preference number: 3 (lower is better)
Translates to: ANCREQLICGSV*FLFRLSEHLER
Trigger: GCGTTCCAGGTGCTCAGAAAGCCTGAAAAGGAAGCACACACTTCCACAGATGAGCTGTTCTCTGCAGTTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR-3UTR CAA 90 bp TATATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAATCACCGAGGGATGGTTaGGACCAGAGCTGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: YIATLQCFSEAIKPSYSESPRDG*DQSWLV
Trigger: GACCAGCCAGCTCTGGTCCAAACCATCCCTCGGTGA...TTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR CCA 72 bp GAAGTGTGTGCTTCCTTTTCAGGCTTTCTGAGCACCTaGAACGCCTTGAAGGGCCTCAGACACTTAGAACAA +
Preference number: 3 (lower is better)
Translates to: EVCASFSGFLST*NALKGLRHLEQ
Trigger: TTGTTCTAAGTGTCTGAGGCCCTTCAAGGCGTTCCAGGTGCTCAGAAAGCCTGAAAAGGAAGCACACACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR CCA 72 bp AGGCTACAAGCGACCCTGAGGAAGGAAGCACCTGCGTaGTTTCCGTTTACTCTAAAGGCACTAAAAGTCTGT +
Preference number: 3 (lower is better)
Translates to: RLQATLRKEAPA*FPFTLKALKVC
Trigger: ACAGACTTTTAGTGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTGTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR TCA 72 bp CAGGAAGAGCTTCTGGTCTGCTTGACACCTTATGCCTaGAACCCGAATTCCATCTCAAGTTGTGTCTCAGTC +
Preference number: 3 (lower is better)
Translates to: QEELLVCLTPYA*NPNSISSCVSV
Trigger: GACTGAGACACAACTTGAGATGGAATTCGGGTTTCAGGCATAAGGTGTCAAGCAGACCAGAAGCTCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR GCA 72 bp ACCACAGGAAGAGCTTCTGGTCTGCTTGACACCTTATaGCTGAAACCCGAATTCCATCTCAAGTTGTGTCTC +
Preference number: 3 (lower is better)
Translates to: TTGRASGLLDTL*LKPEFHLKLCL
Trigger: GAGACACAACTTGAGATGGAATTCGGGTTTCAGGCATAAGGTGTCAAGCAGACCAGAAGCTCTTCCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR-3UTR CAA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCATTTGCAAAGCAACACTaGATTATTACTACACACCAG +
Preference number: 3 (lower is better)
Translates to: QATLRKEAPAWFPFTLKAFAKQH*IITTHQ
Trigger: CTGGTGTGTAGTAATAATCAAGTGTTGCTTTGCAAA...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR TCA 72 bp AAAACAAACAAACAAGATTTGGCATCCACAGGACTGTaGAAATTCACTGACTCACCATCCCCTTCACCTGAA +
Preference number: 3 (lower is better)
Translates to: KTNKQDLASTGL*KFTDSPSPSPE
Trigger: TTCAGGTGAAGGGGATGGTGAGTCAGTGAATTTTCACAGTCCTGTGGATGCCAAATCTTGTTTGTTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR CCA 72 bp TTTGGACCAGAGCTGGCTGGTCCTCATTATCAATTCTaGTGCTGTACATTAGTTCTTATCACAGAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: FGPELAGPHYQF*CCTLVLITEGK
Trigger: TTTTCCTTCTGTGATAAGAACTAATGTACAGCACCAGAATTGATAATGAGGACCAGCCAGCTCTGGTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR TCA 72 bp TCAAATCTGTGTCTTAAACAAACAGCACTCAGAGAATaGAAAGCTAATGCTTTCAAGTGTGTCCTTAGGGGC +
Preference number: 3 (lower is better)
Translates to: SNLCLKQTALRE*KANAFKCVLRG
Trigger: GCCCCTAAGGACACACTTGAAAGCATTAGCTTTTCATTCTCTGAGTGCTGTTTGTTTAAGACACAGATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR GCA 72 bp ACCATAAAGCATTTCTGTTCCTACAGAGACTTTATTTaGAAAGCAACACTTGATTATTACTACACACCAGAT +
Preference number: 3 (lower is better)
Translates to: TIKHFCSYRDFI*KATLDYYYTPD
Trigger: ATCTGGTGTGTAGTAATAATCAAGTGTTGCTTTGCAAATAAAGTCTCTGTAGGAACAGAAATGCTTTATGGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGCAGGACCCACATGTCTGTCCCGGGTTCCTCCTTCCTGCTAGGCTACAAGCGAGGAAAGCAGCCCAGATaGCACCACCTGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRTHMSVPGSSFLLGYKRGKQPR*HHLACR
Trigger: CCTGCAGGCCAGGTGGTGCCATCTGGGCTGCTTTCC...TCGCTTGTAGCCTAGCAGGAAGGAGGAACCCGGGACAGACATGTGGGTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp AGCAGGACCCACATGTCTGTCCCGGGTTCCTCCTTCCTGCTAGGCTACAAGCGACTGACTGCTGCAGGCTaGGGCTACTCTGGCACACAG +
Preference number: 4 (lower is better)
Translates to: SRTHMSVPGSSFLLGYKRLTAAG*GYSGTQ
Trigger: CTGTGTGCCAGAGTAGCCTCAGCCTGCAGCAGTCAG...TCGCTTGTAGCCTAGCAGGAAGGAGGAACCCGGGACAGACATGTGGGTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp CAGGCTGTTGCTACTGACACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATGACAGGCGGGGGAGCTaGCTGCTGCAGGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QAVATDTDTRGETRRAWNDRRGS*LLQAEA
Trigger: AGCCTCAGCCTGCAGCAGTCAGCTCCCCCGCCTGTC...ATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGTGTCAGTAGCAACAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGCAGGACCCACATGTCTGTCCCGGGTTCCTCCTTCCTGCTAGGCTACAAGCGATGTGGCAAAGCAAGCTaGAAGCAGGGTGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SRTHMSVPGSSFLLGYKRCGKAS*KQGGGA
Trigger: GGCCCCTCCACCCTGCTTCCAGCTTGCTTTGCCACA...TCGCTTGTAGCCTAGCAGGAAGGAGGAACCCGGGACAGACATGTGGGTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp CAGGCTGTTGCTACTGACACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATGGCGGGGGAGCTGACTaGTGCAGGCTGAGGCTACTC +
Preference number: 4 (lower is better)
Translates to: QAVATDTDTRGETRRAWNGGGAD*CRLRLL
Trigger: GAGTAGCCTCAGCCTGCAGCAGTCAGCTCCCCCGCC...ATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGTGTCAGTAGCAACAGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCAGGCTGGGCAAGGAGCTaGCCATCTGTGTGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: QATLRKEAPAWFPFTLKAGWARS*PSVCPS
Trigger: GCTCGGGCACACAGATGGGCAGCTCCTTGCCCAGCC...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGCAGGACCCACATGTCTGTCCCGGGTTCCTCCTTCCTGCTAGGCTACAAGCGATCGGAGCACTGCTGTTaGGCGGTAAAGCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SRTHMSVPGSSFLLGYKRSEHCC*AVKPSG
Trigger: CCCACTTGGCTTTACCGCCCAACAGCAGTGCTCCGA...TCGCTTGTAGCCTAGCAGGAAGGAGGAACCCGGGACAGACATGTGGGTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp GCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAGGTGGGTACCCCAGGCCTCACTaGGGGGCCCACAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: ATLQCFSEAIKPSYSEGGYPRPH*GAHRKH
Trigger: GTGCTTCCTGTGGGCCCCCCAGTGAGGCCTGGGGTA...CCCACCTTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CTCCTTCCTGCTAGGCTACAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTGCTCACCAACACCTGTaGAGAGGGCAGGCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LLPARLQATLRKEAPAWFAHQHL*RGQAGQ
Trigger: TTGCCCAGCCTGCCCTCTCCACAGGTGTTGGTGAGC...AAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTGTAGCCTAGCAGGAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp CTCCTTCCTGCTAGGCTACAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTGGGGACAGTCTGGTTTaGGGAAAGCAGCCCAGATGG +
Preference number: 4 (lower is better)
Translates to: LLPARLQATLRKEAPAWFGDSLV*GKQPRW
Trigger: CCATCTGGGCTGCTTTCCTCAAACCAGACTGTCCCC...AAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTGTAGCCTAGCAGGAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp AGCAGGACCCACATGTCTGTCCCGGGTTCCTCCTTCCTGCTAGGCTACAAGCGAGCTCTGGACTTTGCGTaGAGGCGCGTGGAACATTCT +
Preference number: 4 (lower is better)
Translates to: SRTHMSVPGSSFLLGYKRALDFA*RRVEHS
Trigger: AGAATGTTCCACGCGCCTGCACGCAAAGTCCAGAGC...TCGCTTGTAGCCTAGCAGGAAGGAGGAACCCGGGACAGACATGTGGGTCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp GCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAGGTGGGGGGGGAGCTGACTGCTaGAGGCTGAGGCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: ATLQCFSEAIKPSYSEGGGGADC*RLRLLW
Trigger: CCAGAGTAGCCTCAGCCTGCAGCAGTCAGCTCCCCC...CCCACCTTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCACCAGATGGCACCACCTaGCCTGCAGGGAGAACCCTC +
Preference number: 4 (lower is better)
Translates to: QATLRKEAPAWFPFTLKAPDGTT*PAGRTL
Trigger: GAGGGTTCTCCCTGCAGGCCAGGTGGTGCCATCTGG...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ATGCTTTCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTACAGGCCCAACTGGCTaGGTCAGGGGCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: MLSSVSLGATHIQSTGFSTGPTG*VRGSTA
Trigger: TGCTGTGCTGCCCCTGACTCAGCCAGTTGGGCCTGT...AGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGAAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp GCTTCCTTTTCAGGCTTTCTGAGCACCTGGAACGCCTTGAAGGGCCTCAGACACCCAGAAGTGGCTGTCTaGCCAGGGATCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ASFSGFLSTWNALKGLRHPEVAV*PGITPA
Trigger: TGCTGGAGTGATCCCTGGTCAGACAGCCACTTCTGG...GTGTCTGAGGCCCTTCAAGGCGTTCCAGGTGCTCAGAAAGCCTGAAAAGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCAACAGACGGGCTGAGCTaGAGTACCCCAGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: QATLRKEAPAWFPFTLKATDGLS*STPGLT
Trigger: AGTGAGGCCTGGGGTACTGCAGCTCAGCCCGTCTGT...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp TCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTAGACACCTGGGCAGTGGTAGGTaGGGAGTGTGTAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSVSLGATHIQSTGFSRHLGSGR*GVCKAP
Trigger: GGGAGCCTTACACACTCCCCACCTACCACTGCCCAG...GTGTCTAGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGCAGGACCCACATGTCTGTCCCGGGTTCCTCCTTCCTGCTAGGCTACAAGCGATCTTCCGGCCCTAAATaGCCTTCAGGCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SRTHMSVPGSSFLLGYKRSSGPK*PSGSFL
Trigger: GAGAAAGCTGCCTGAAGGCCATTTAGGGCCGGAAGA...TCGCTTGTAGCCTAGCAGGAAGGAGGAACCCGGGACAGACATGTGGGTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ACACTTAGAACAAGAGTGAGAGGTGGGAATGGGATGTCCAAAGTCAGCCGGACTCCAGCAGGGGTCACCTaGCCTGCAGGAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: TLRTRVRGGNGMSKVSRTPAGVT*PAGRTP
Trigger: AGGAGTCCTTCCTGCAGGTCAGGTGACCCCTGCTGG...AGTCCGGCTGACTTTGGACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ACAGAAGGAAAAACTGAAACAGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTAGGGCACCGGCAGAGTaGCAGACACGGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TEGKTETAAKRTAENSSSRAPAE*QTRGPV
Trigger: CACTGGCCCCCGTGTCTGTCACTCTGCCGGTGCCCT...AGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCTGTTTCAGTTTTTCCTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp TGTGTCTCAGTCAAGAGCAGGACCCACATGTCTGTCCCGGGTTCCTCCTTCCTGTGCATCAGCTCCTCCTaGGAGACCAGGCACTTACAA +
Preference number: 4 (lower is better)
Translates to: CVSVKSRTHMSVPGSSFLCISSS*ETRHLQ
Trigger: TTGTAAGTGCCTGGTCTCGCAGGAGGAGCTGATGCA...CAGGAAGGAGGAACCCGGGACAGACATGTGGGTCCTGCTCTTGACTGAGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp TCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTAGACACTCCAAGGCTAGCGCCTaGAGTGAGTCTTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: SSVSLGATHIQSTGFSRHSKASA*SESSLG
Trigger: GCCCAGTGAAGACTCACTGCAGGCGCTAGCCTTGGA...GTGTCTAGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCAAGGAGAACGGGCAGTTaGGGCAGGGGATCATCAGCT +
Preference number: 4 (lower is better)
Translates to: QATLRKEAPAWFPFTLKARRTGS*GRGSSA
Trigger: AGCTGATGATCCCCTGCCCCAACTGCCCGTTCTCCT...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp ACAGAAGGAAAAACTGAAACAGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTGCTTGCCCACCACCCTaGGCTGGGAGGAGAACGGGC +
Preference number: 4 (lower is better)
Translates to: TEGKTETAAKRTAENSSSACPPP*AGRRTG
Trigger: GCCCGTTCTCCTCCCAGCCCAGGGTGGTGGGCAAGC...AGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCTGTTTCAGTTTTTCCTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp ATGCTTTCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTCCAGCTCTCACCGGCTaGCTCATAGGCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: MLSSVSLGATHIQSTGFSPALTG*LIGRML
Trigger: CAGCATCCTGCCTATGAGCCAGCCGGTGAGAGCTGG...AGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGAAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGCAGGACCCACATGTCTGTCCCGGGTTCCTCCTTCCTGCTAGGCTACAAGCGAACTGTGGGCATGACATaGTGCCTCTCCTTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SRTHMSVPGSSFLLGYKRTVGMT*CLSFKC
Trigger: ACACTTGAAGGAGAGGCACCATGTCATGCCCACAGT...TCGCTTGTAGCCTAGCAGGAAGGAGGAACCCGGGACAGACATGTGGGTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp CAGGCTGTTGCTACTGACACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATGGTGCAACCTCAGGCTaGGGCCTCACCTTAACATAC +
Preference number: 4 (lower is better)
Translates to: QAVATDTDTRGETRRAWNGATSG*GLTLTY
Trigger: GTATGTTAAGGTGAGGCCTCAGCCTGAGGTTGCACC...ATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGTGTCAGTAGCAACAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp TCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTAGACACCTTGCAGGTCTGAGCTaGTGTCCTTGGGAGCACTTC +
Preference number: 4 (lower is better)
Translates to: SSVSLGATHIQSTGFSRHLAGLS*CPWEHF
Trigger: GAAGTGCTCCCAAGGACAGCAGCTCAGACCTGCAAG...GTGTCTAGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CCTCAGACACTTAGAACAAGAGTGAGAGGTGGGAATGGGATGTCCAAAGTCAGCCCAGGGCGGACAGCTTaGTTCACGGAGCACATGGCT +
Preference number: 4 (lower is better)
Translates to: PQTLRTRVRGGNGMSKVSPGRTA*FTEHMA
Trigger: AGCCATGTGCTCCGTGAACCAAGCTGTCCGCCCTGG...GCTGACTTTGGACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTGTCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp ATGCTTTCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTGAACCACCTGGCCAGTaGGTAAGACCCCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: MLSSVSLGATHIQSTGFSEPPGQ*VRPQKW
Trigger: CCACTTCTGGGGTCTTACCCACTGGCCAGGTGGTTC...AGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGAAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ACACTTAGAACAAGAGTGAGAGGTGGGAATGGGATGTCCAAAGTCAGCCGGACTTGGGGTCACAGTCACTaGCTGCACAGTGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TLRTRVRGGNGMSKVSRTWGHSH*LHSARA
Trigger: AGCTCTGGCACTGTGCAGTCAGTGACTGTGACCCCA...AGTCCGGCTGACTTTGGACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp TATATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAACCCACCACCCTGGGCTaGGAGGAGAACGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: YIATLQCFSEAIKPSYSEPTTLG*EENGQL
Trigger: CAACTGCCCGTTCTCCTCCCAGCCCAGGGTGGTGGG...TTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCAGGCGGTAAAGCCAAGTaGGTCACTGGTTTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: QATLRKEAPAWFPFTLKAGGKAK*VTGFGA
Trigger: TGCTCCAAAACCAGTGACCCACTTGGCTTTACCGCC...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp TATATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAGGGCAAGAACTGCACTaGCACCTGGGGTGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: YIATLQCFSEAIKPSYSEGQELH*HLGWRS
Trigger: GGACCGCCACCCCAGGTGCCAGTGCAGTTCTTGCCC...TTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CTCCTTCCTGCTAGGCTACAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCATCCACTTCAGAAATaGGGCACATGCAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LLPARLQATLRKEAPAWFHPLQK*GTCSKL
Trigger: AAGCTTGCTGCATGTGCCCCATTTCTGAAGTGGATG...AAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTGTAGCCTAGCAGGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CAGGCTGTTGCTACTGACACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATCTGAGCTGCTGTCCTTaGGAGCACTTCTACAACGGA +
Preference number: 4 (lower is better)
Translates to: QAVATDTDTRGETRRAWNLSCCP*EHFYNG
Trigger: TCCGTTGTAGAAGTGCTCCCAAGGACAGCAGCTCAG...ATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGTGTCAGTAGCAACAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCAGTGATGAAATCGAGATaGGGGAAGAGCAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: QATLRKEAPAWFPFTLKAVMKSR*GKSRFP
Trigger: TGGGAACCTGCTCTTCCCTCATCTCGATTTCATCAC...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp ACAGAAGGAAAAACTGAAACAGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTAGCGGCGGGGTAGCCTaGACAAACACACTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TEGKTETAAKRTAENSSSSGGVA*TNTLGA
Trigger: TGCCCCTAGTGTGTTTGTGCAGGCTACCCCGCCGCT...AGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCTGTTTCAGTTTTTCCTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp ACACTTAGAACAAGAGTGAGAGGTGGGAATGGGATGTCCAAAGTCAGCCGGACTCTCTTCTTGCCCAGGTaGTTAGTCCTGCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TLRTRVRGGNGMSKVSRTLFLPR*LVLLCS
Trigger: GGAGCACAGCAGGACTAAGCACCTGGGCAAGAAGAG...AGTCCGGCTGACTTTGGACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp CTGTTGCTACTGACACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATACCAGTGGGCATGACATGGTaGCTCTCCTTCAAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LLLLTLTLVGKQGVHGIPVGMTW*LSFKCS
Trigger: GCTACACTTGAAGGAGAGGCACCATGTCATGCCCAC...TGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGTGTCAGTAGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCAACGGAGCACATGGCTTaGTTCACAGGAAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: QATLRKEAPAWFPFTLKATEHMA*FTGRML
Trigger: AAGCATCCTTCCTGTGAACCAAGCCATGTGCTCCGT...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGCAGGACCCACATGTCTGTCCCGGGTTCCTCCTTCCTGCTAGGCTACAAGCGATGTGCTCAAACAAAATaGGCAGGTCAGCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SRTHMSVPGSSFLLGYKRCAQTK*AGQLLF
Trigger: AAACAGAAGCTGACCTGCCCATTTTGTTTGAGCACA...TCGCTTGTAGCCTAGCAGGAAGGAGGAACCCGGGACAGACATGTGGGTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCACCTCTTGATGTGTTCTaGGATCACAGACCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: QATLRKEAPAWFPFTLKAPLDVF*DHRPQL
Trigger: AAGCTGAGGTCTGTGATCTCAGAACACATCAAGAGG...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAGGTCCACACCCACAAGAGTaGAGACAGCAGCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: IATLQCFSEAIKPSYSEGPHPQE*RQQLHF
Trigger: GAAGTGGAGCTGCTGTCTTCACTCTTGTGGGTGTGG...ACCTTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCACCTTCATCAGCTCCTTaGAGCTGTCAAGGCCAATAT +
Preference number: 4 (lower is better)
Translates to: QATLRKEAPAWFPFTLKAPSSAP*SCQGQY
Trigger: ATATTGGCCTTGACAGCTGCAAGGAGCTGATGAAGG...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp GCTTCCTTTTCAGGCTTTCTGAGCACCTGGAACGCCTTGAAGGGCCTCAGACACTCGCTTGCTTTTGGTTaGTCTCCTGTTTCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: ASFSGFLSTWNALKGLRHSLAFG*SPVSSV
Trigger: AACTGAGGAAACAGGAGAGCAACCAAAAGCAAGCGA...GTGTCTGAGGCCCTTCAAGGCGTTCCAGGTGCTCAGAAAGCCTGAAAAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp TCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTAGACACTCACTGACTGCACAGTaGCAGAGCTTTGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: SSVSLGATHIQSTGFSRHSLTAQ*QSFDCS
Trigger: AGAACAGTCAAAGCTCTGGCACTGTGCAGTCAGTGA...GTGTCTAGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp ACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATACCAAAGATTTAATTTACTGGCACCACCTGGCCTaGAGGGAGAACCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: TDTRGETRRAWNTKDLIYWHHLA*RENPQG
Trigger: CCCTTGAGGGTTCTCCCTGCAGGCCAGGTGGTGCCA...GTAAATTAAATCTTTGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp CTGTTGCTACTGACACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATACCACAGAAATGGGGCACATaGAGCAAGCTTTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLLLTLTLVGKQGVHGIPQKWGT*SKLFRL
Trigger: GAGCCTGAAAAGCTTGCTGCATGTGCCCCATTTCTG...TGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGTGTCAGTAGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp ATGCTTTCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTTCAATAAATCCGGGCTaGACTTGCAGGTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: MLSSVSLGATHIQSTGFSSINPG*TCRSEL
Trigger: CAGCTCAGACCTGCAAGTCCAGCCCGGATTTATTGA...AGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp ACAGAAGGAAAAACTGAAACAGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTTCCTCCCCATCCCTCTaGTCTTCCGGCCCTAAATGG +
Preference number: 4 (lower is better)
Translates to: TEGKTETAAKRTAENSSSSSPSL*SSGPKW
Trigger: CCATTTAGGGCCGGAAGACCAGAGGGATGGGGAGGA...AGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCTGTTTCAGTTTTTCCTTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp ACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATACCAAAGATTTAATTTACGCATCTAGGGTGAGCTaGGGCTCCTCCCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: TDTRGETRRAWNTKDLIYASRVS*GSSPSL
Trigger: GAGGGATGGGGAGGAGCCCCAGCTCACCCTAGATGC...GTAAATTAAATCTTTGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp CTGTTGCTACTGACACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATACCATCTTCCGCACCTTCCTaGTGTTGTCAAGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLLLTLTLVGKQGVHGIPSSAPS*CCQDSA
Trigger: TGCAGAATCTTGACAACATCAGGAAGGTGCGGAAGA...TGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGTGTCAGTAGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ACAGAAGGAAAAACTGAAACAGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTAGCCCAGGCCATGCATaGGCAAATGGTGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: TEGKTETAAKRTAENSSSSPGHA*ANGASA
Trigger: AGCTGATGCACCATTTGCTCATGCATGGCCTGGGCT...AGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCTGTTTCAGTTTTTCCTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAGGTAGGCCCCGGACATCATaGAAAGTGCACGGACAAAAC +
Preference number: 4 (lower is better)
Translates to: IATLQCFSEAIKPSYSEGRPRTS*KVHGQN
Trigger: GTTTTGTCCGTGCACTTTTCATGATGTCCGGGGCCT...ACCTTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp TATATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAACTCAAGGGCACTGTCTaGCCAGGAGGAAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: YIATLQCFSEAIKPSYSELKGTV*PGGRPR
Trigger: TCGAGGTCTTCCTCCTGGCCAGACAGTGCCCTTGAG...TTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp TATATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAACCCGAGGGGACAGTCTaGTTTGAGGAAAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: YIATLQCFSEAIKPSYSEPEGTV*FEESSP
Trigger: TGGGCTGCTTTCCTCAAACCAGACTGTCCCCTCGGG...TTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CCTCAGACACTTAGAACAAGAGTGAGAGGTGGGAATGGGATGTCCAAAGTCAGCGGGCCAGTGTATACGTaGGGATTCCATTCACCTGTT +
Preference number: 4 (lower is better)
Translates to: PQTLRTRVRGGNGMSKVSGPVYT*GFHSPV
Trigger: AACAGGTGAATGGAATCCCCACGTATACACTGGCCC...GCTGACTTTGGACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTGTCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp TCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTAGACACGAACCTGGTAGACATTaGCAGGAAAGAGTTCATTGC +
Preference number: 4 (lower is better)
Translates to: SSVSLGATHIQSTGFSRHEPGRH*QERVHC
Trigger: GCAATGAACTCTTTCCTGCCAATGTCTACCAGGTTC...GTGTCTAGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CCTCAGACACTTAGAACAAGAGTGAGAGGTGGGAATGGGATGTCCAAAGTCAGCTCTTTACAGGAAAGGTaGACTCAGGGATCACGTCCC +
Preference number: 4 (lower is better)
Translates to: PQTLRTRVRGGNGMSKVSSLQER*TQGSRP
Trigger: GGGACGTGATCCCTGAGTCCACCTTTCCTGTAAAGA...GCTGACTTTGGACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTGTCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAGGTTTAAGTGCAACACTGTaGGAGAGAAAGACAGGCGGG +
Preference number: 4 (lower is better)
Translates to: IATLQCFSEAIKPSYSEGLSATL*ERKTGG
Trigger: CCCGCCTGTCTTTCTCTCTCACAGTGTTGCACTTAA...ACCTTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp TATATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAATGCAGGAAGGACTCCTaGTGGAACTGCTCGACCTAC +
Preference number: 4 (lower is better)
Translates to: YIATLQCFSEAIKPSYSECRKDS*WNCSTY
Trigger: GTAGGTCGAGCAGTTCCATCAGGAGTCCTTCCTGCA...TTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp CCTCAGACACTTAGAACAAGAGTGAGAGGTGGGAATGGGATGTCCAAAGTCAGCCAGGAAAGAGTTCATTaGAAACCTGGCAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PQTLRTRVRGGNGMSKVSQERVH*KPGRAE
Trigger: CTCAGCTCTGCCAGGTTTGCAATGAACTCTTTCCTG...GCTGACTTTGGACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTGTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp TATATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAATATGGACTGTGGGCATaGCATGGTGCCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: YIATLQCFSEAIKPSYSEYGLWA*HGASPS
Trigger: TGAAGGAGAGGCACCATGTCATGCCCACAGTCCATA...TTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGGGAACACTTGAAAAGGTGTAAATCAAATCTGTGTCTTAAACAAACAGCACTCGTGGAGAGGGCAGGCTaGGCAAGGAGCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: REHLKRCKSNLCLKQTALVERAG*ARSCPS
Trigger: AGATGGGCAGCTCCTTGCCCAGCCTGCCCTCTCCAC...GAGTGCTGTTTGTTTAAGACACAGATTTGATTTACACCTTTTCAAGTGTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp ACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATACCAAAGATTTAATTTACGGGCATGTTTTCCACTaGTTCGCCTGTTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: TDTRGETRRAWNTKDLIYGHVFH*FACLSA
Trigger: GGCACTCAAACAGGCGAAGCAGTGGAAAACATGCCC...GTAAATTAAATCTTTGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp ACACTTAGAACAAGAGTGAGAGGTGGGAATGGGATGTCCAAAGTCAGCCGGACTTCCAAGTTTCTCTCGTaGCAGTATGGTGATGAAATC +
Preference number: 4 (lower is better)
Translates to: TLRTRVRGGNGMSKVSRTSKFLS*QYGDEI
Trigger: GATTTCATCACCATACTGCCACGAGAGAAACTTGGA...AGTCCGGCTGACTTTGGACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATACCAAAGATTTAATTTACACTGCTTCGCCTGTTTaGGTGCCTGATTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: TDTRGETRRAWNTKDLIYTASPV*VPDLHL
Trigger: CAGATGCAAATCAGGCACTCAAACAGGCGAAGCAGT...GTAAATTAAATCTTTGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp TATATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAACAATATCCACAAGGATaGCTTTCACCCTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: YIATLQCFSEAIKPSYSEQYPQG*LSPSSA
Trigger: TGCGGAAGAGGGTGAAAGGCATCCTTGTGGATATTG...TTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp AGGGAACACTTGAAAAGGTGTAAATCAAATCTGTGTCTTAAACAAACAGCACTCAATCCGGGCTGGACTTaGAGGTCTGAGCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: REHLKRCKSNLCLKQTALNPGWT*RSELLS
Trigger: GGACAGCAGCTCAGACCTGCAAGTCCAGCCCGGATT...GAGTGCTGTTTGTTTAAGACACAGATTTGATTTACACCTTTTCAAGTGTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CAGGCTGTTGCTACTGACACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATAAAGTACTTCTCTCCTaGATCAAAGCTTTTAAGATC +
Preference number: 4 (lower is better)
Translates to: QAVATDTDTRGETRRAWNKVLLS*IKAFKI
Trigger: GATCTTAAAAGCTTTGATCCAGGAGAGAAGTACTTT...ATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGTGTCAGTAGCAACAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp CAAGCGACCCTGAGGAAGGAAGCACCTGCGTGGTTTCCGTTTACTCTAAAGGCATGTAGTACAGAGTGTTaGAAAAGTTACACTTTAGAC +
Preference number: 4 (lower is better)
Translates to: QATLRKEAPAWFPFTLKACSTEC*KSYTLD
Trigger: GTCTAAAGTGTAACTTTTCCAACACTCTGTACTACA...TGCCTTTAGAGTAAACGGAAACCACGCAGGTGCTTCCTTCCTCAGGGTCGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ACAGAAGGAAAAACTGAAACAGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTTCTCTTCCCAAAGAATaGAGCCACGTCAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: TEGKTETAAKRTAENSSSSLPKE*SHVNFP
Trigger: TGGAAAATTGACGTGGCTTCATTCTTTGGGAAGAGA...AGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCTGTTTCAGTTTTTCCTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR GCA 90 bp ACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATACCAAAGATTTAATTTACGCACGTGCTTCTTCATaGTGTAGTACAGAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: TDTRGETRRAWNTKDLIYARASS*CSTECW
Trigger: CCAACACTCTGTACTACAGCATGAAGAAGCACGTGC...GTAAATTAAATCTTTGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp ACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATACCAAAGATTTAATTTACGCTTTGACTGTTCTGTaGCAAAGCAAGCTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TDTRGETRRAWNTKDLIYALTVL*QSKLEA
Trigger: TGCTTCCAGCTTGCTTTGCCACAGAACAGTCAAAGC...GTAAATTAAATCTTTGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ACAGAAGGAAAAACTGAAACAGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTTCTGAGAATAGAGCCTaGAGTAAAGAAAGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: TEGKTETAAKRTAENSSSSENRA*SKESSV
Trigger: AACACTACTTTCTTTACTTCAGGCTCTATTCTCAGA...AGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCTGTTTCAGTTTTTCCTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR TCA 90 bp ACAGAAGGAAAAACTGAAACAGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTAGTACAGAAGGCTTGTaGGTTTTTATTGCTTTCATG +
Preference number: 4 (lower is better)
Translates to: TEGKTETAAKRTAENSSSSTEGL*VFIAFM
Trigger: CATGAAAGCAATAAAAACTCACAAGCCTTCTGTACT...AGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCTGTTTCAGTTTTTCCTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGGGAACACTTGAAAAGGTGTAAATCAAATCTGTGTCTTAAACAAACAGCACTCACACAGGCAAAGAGCTaGAGACCAAAGCTACGTGAG +
Preference number: 4 (lower is better)
Translates to: REHLKRCKSNLCLKQTALTQAKS*RPKLRE
Trigger: CTCACGTAGCTTTGGTCTCCAGCTCTTTGCCTGTGT...GAGTGCTGTTTGTTTAAGACACAGATTTGATTTACACCTTTTCAAGTGTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGGGAACACTTGAAAAGGTGTAAATCAAATCTGTGTCTTAAACAAACAGCACTCGAGACTACAGCAGTATaGTTTTGTCCGGTATCTCGC +
Preference number: 4 (lower is better)
Translates to: REHLKRCKSNLCLKQTALETTAV*FCPVSR
Trigger: GCGAGATACCGGACAAAACCATACTGCTGTAGTCTC...GAGTGCTGTTTGTTTAAGACACAGATTTGATTTACACCTTTTCAAGTGTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGGGAACACTTGAAAAGGTGTAAATCAAATCTGTGTCTTAAACAAACAGCACTCAGGATCGCTTGCTTTTaGTTGCTCTCCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: REHLKRCKSNLCLKQTALRIACF*LLSCFL
Trigger: GAGGAAACAGGAGAGCAACCAAAAGCAAGCGATCCT...GAGTGCTGTTTGTTTAAGACACAGATTTGATTTACACCTTTTCAAGTGTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CCA 90 bp AGGGAACACTTGAAAAGGTGTAAATCAAATCTGTGTCTTAAACAAACAGCACTCGAACCTGATAGACATTaGAAGGGAAGAGCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: REHLKRCKSNLCLKQTALEPDRH*KGRARC
Trigger: GCAACGAGCTCTTCCCTTCCAATGTCTATCAGGTTC...GAGTGCTGTTTGTTTAAGACACAGATTTGATTTACACCTTTTCAAGTGTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
3UTR CAA 72 bp TCTGTTCCTACAGAGACTTTATTTGCAAAGCAACACTaGATTATTACTACACACCAGATCTCAGATTCAGGA +
Preference number: 4 (lower is better)
Translates to: SVPTETLFAKQH*IITTHQISDSG
Trigger: TCCTGAATCTGAGATCTGGTGTGTAGTAATAATCAAGTGTTGCTTTGCAAATAAAGTCTCTGTAGGAACAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 90 bp ACACCTGTGGAGAGGGCAGGCTGGGCAAGGAGCTGCCCATCTGTGTaGCCGAGCCTGAGGGCAAGAACTGCACTGGCACCTGGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: TPVERAGWARSCPSV*PSLRARTALAPGVA
Trigger: CGCCACCCCAGGTGCCAGTGCAGTTCTTGCCCTCAGGCTCGGGCACACAGATGGGCAGCTCCTTGCCCAGCCTGCCCTCTCCACAGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp CCCATCTGTGTGCCCGAGCCTGAGGGCAAGAACTGCACTGGCACCTaGGGTGGCGGTCCAACAGCTGCAAGGCCTCCACCAGAGGGCACC +
Preference number: 5 (lower is better)
Translates to: PICVPEPEGKNCTGT*GGGPTAARPPPEGT
Trigger: GGTGCCCTCTGGTGGAGGCCTTGCAGCTGTTGGACCGCCACCCCAGGTGCCAGTGCAGTTCTTGCCCTCAGGCTCGGGCACACAGATGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 90 bp GGCAAGGAGCTGCCCATCTGTGTGCCCGAGCCTGAGGGCAAGAACTaGACTGGCACCTGGGGTGGCGGTCCAACAGCTGCAAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GKELPICVPEPEGKN*TGTWGGGPTAARPP
Trigger: TGGAGGCCTTGCAGCTGTTGGACCGCCACCCCAGGTGCCAGTGCAGTTCTTGCCCTCAGGCTCGGGCACACAGATGGGCAGCTCCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 90 bp CAGGGCTCACCAACACCTGTGGAGAGGGCAGGCTGGGCAAGGAGCTaGCCATCTGTGTGCCCGAGCCTGAGGGCAAGAACTGCACTGGCA +
Preference number: 5 (lower is better)
Translates to: QGSPTPVERAGWARS*PSVCPSLRARTALA
Trigger: TGCCAGTGCAGTTCTTGCCCTCAGGCTCGGGCACACAGATGGGCAGCTCCTTGCCCAGCCTGCCCTCTCCACAGGTGTTGGTGAGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp GCAGGCGCGTGGAACATTCTGAAGTGCTTGCCCACCACCCTGGGCTaGGAGGAGAACGGGCAGTTGGGGCAGGGGATCATCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: AGAWNILKCLPTTLG*EENGQLGQGIISSW
Trigger: CCAGGAGCTGATGATCCCCTGCCCCAACTGCCCGTTCTCCTCCCAGCCCAGGGTGGTGGGCAAGCACTTCAGAATGTTCCACGCGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp GCGGTCCAACAGCTGCAAGGCCTCCACCAGAGGGCACCGGCAGAGTaGCAGACACGGGGGCCAGTGTATACGTGGGGATTCCATTCACCT +
Preference number: 5 (lower is better)
Translates to: AVQQLQGLHQRAPAE*QTRGPVYTWGFHSP
Trigger: AGGTGAATGGAATCCCCACGTATACACTGGCCCCCGTGTCTGTCACTCTGCCGGTGCCCTCTGGTGGAGGCCTTGCAGCTGTTGGACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp GATGGCACCACCTGGCCTGCAGGGAGAACCCTCAAGGGCACTGTCTaGCCAGGAGGAAGACCTCGAGAAGGAGCTGTCTGGCCAACAGGA +
Preference number: 5 (lower is better)
Translates to: DGTTWPAGRTLKGTV*PGGRPREGAVWPTG
Trigger: TCCTGTTGGCCAGACAGCTCCTTCTCGAGGTCTTCCTCCTGGCCAGACAGTGCCCTTGAGGGTTCTCCCTGCAGGCCAGGTGGTGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp TCACTGTGTAGCTCTGGACTTTGCGTGCAGGCGCGTGGAACATTCTaGAGTGCTTGCCCACCACCCTGGGCTGGGAGGAGAACGGGCAGT +
Preference number: 5 (lower is better)
Translates to: SLCSSGLCVQARGTF*SACPPPWAGRRTGS
Trigger: ACTGCCCGTTCTCCTCCCAGCCCAGGGTGGTGGGCAAGCACTTCAGAATGTTCCACGCGCCTGCACGCAAAGTCCAGAGCTACACAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp CGCCCAGACCTTTCTCTGAACCCGAACTTGCATCAGCATCTAGGGTaGGCTGGGGCTCCTCCCCATCCCTCTGGTCTTCCGGCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: RPDLSLNPNLHQHLG*AGAPPHPSGLPALN
Trigger: ATTTAGGGCCGGAAGACCAGAGGGATGGGGAGGAGCCCCAGCTCACCCTAGATGCTGATGCAAGTTCGGGTTCAGAGAAAGGTCTGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 90 bp AAGCAAGCTGGAAGCAGGGTGGAGGGGCCGCAATGCTCGGAGCACTaGTGTTGGGCGGTAAAGCCAAGTGGGTCACTGGTTTTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: KQAGSRVEGPQCSEH*CWAVKPSGSLVLEQ
Trigger: TTGCTCCAAAACCAGTGACCCACTTGGCTTTACCGCCCAACAGCAGTGCTCCGAGCATTGCGGCCCCTCCACCCTGCTTCCAGCTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp GCTGGAAGCAGGGTGGAGGGGCCGCAATGCTCGGAGCACTGCTGTTaGGCGGTAAAGCCAAGTGGGTCACTGGTTTTGGAGCAATATGCA +
Preference number: 5 (lower is better)
Translates to: AGSRVEGPQCSEHCC*AVKPSGSLVLEQYA
Trigger: TGCATATTGCTCCAAAACCAGTGACCCACTTGGCTTTACCGCCCAACAGCAGTGCTCCGAGCATTGCGGCCCCTCCACCCTGCTTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp AGACCTTTCTCTGAACCCGAACTTGCATCAGCATCTAGGGTGAGCTaGGGCTCCTCCCCATCCCTCTGGTCTTCCGGCCCTAAATGGCCT +
Preference number: 5 (lower is better)
Translates to: RPFSEPELASASRVS*GSSPSLWSSGPKWP
Trigger: AGGCCATTTAGGGCCGGAAGACCAGAGGGATGGGGAGGAGCCCCAGCTCACCCTAGATGCTGATGCAAGTTCGGGTTCAGAGAAAGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp TCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTAGACACGAGGAGAACGGGCAGTaGGGGCAGGGGATCATCAGC +
Preference number: 5 (lower is better)
Translates to: SSVSLGATHIQSTGFSRHEENGQ*GQGIIS
Trigger: GCTGATGATCCCCTGCCCCAACTGCCCGTTCTCCTC...GTGTCTAGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp GCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAGGTGGGTCCAGGGCGGACAGCTaGGTTCACGGAGCACATGGC +
Preference number: 5 (lower is better)
Translates to: ATLQCFSEAIKPSYSEGGSRADS*VHGAHG
Trigger: GCCATGTGCTCCGTGAACCAAGCTGTCCGCCCTGGA...CCCACCTTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp AGGCTACTCTGGCACACAGGCAAAGAGCTGGAGACCAAAGCTACGTaGGACTGGGCAGTGGTAGGTGGGGAGTGTGTAAGGCTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: RLLWHTGKELETKAT*DWAVVGGECVRLPE
Trigger: TTCTGGGAGCCTTACACACTCCCCACCTACCACTGCCCAGTCTCACGTAGCTTTGGTCTCCAGCTCTTTGCCTGTGTGCCAGAGTAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 90 bp CTTCGTCTCACCCAGAATGTTCACTGTGTAGCTCTGGACTTTGCGTaGAGGCGCGTGGAACATTCTGAAGTGCTTGCCCACCACCCTGGG +
Preference number: 5 (lower is better)
Translates to: LRLTQNVHCVALDFA*RRVEHSEVLAHHPG
Trigger: CCCAGGGTGGTGGGCAAGCACTTCAGAATGTTCCACGCGCCTGCACGCAAAGTCCAGAGCTACACAGTGAACATTCTGGGTGAGACGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 90 bp CTCGTTGCAAACCGGGCATGTTTTCCACTGCTTCGCCTGTTTGAGTaGCTGATTTGCATCTGCCAGCGGCGGGGTAGCCTGCACAAACAC +
Preference number: 5 (lower is better)
Translates to: LVANRACFPLLRLFE*LICICQRRGSLHKH
Trigger: GTGTTTGTGCAGGCTACCCCGCCGCTGGCAGATGCAAATCAGGCACTCAAACAGGCGAAGCAGTGGAAAACATGCCCGGTTTGCAACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp CTTGCATCAGCATCTAGGGTGAGCTGGGGCTCCTCCCCATCCCTCTaGTCTTCCGGCCCTAAATGGCCTTCAGGCAGCTTTCTCTTTACA +
Preference number: 5 (lower is better)
Translates to: LASASRVSWGSSPSL*SSGPKWPSGSFLFT
Trigger: TGTAAAGAGAAAGCTGCCTGAAGGCCATTTAGGGCCGGAAGACCAGAGGGATGGGGAGGAGCCCCAGCTCACCCTAGATGCTGATGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp TGGGGAGTGTGTAAGGCTCCCAGAAGTGCCTGGGGTCACAGTCACTaGCTGCACAGTGCCAGAGCTTTGACTGTTCTGTGGCAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: WGVCKAPRSAWGHSH*LHSARALTVLWQSK
Trigger: CTTGCTTTGCCACAGAACAGTCAAAGCTCTGGCACTGTGCAGTCAGTGACTGTGACCCCAGGCACTTCTGGGAGCCTTACACACTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp CTGATTAAGTGCAACACTGTGAGAGAGAAAGACAGGCGGGGGAGCTaGCTGCTGCAGGCTGAGGCTACTCTGGCACACAGGCAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: LIKCNTVREKDRRGS*LLQAEATLAHRQRA
Trigger: AGCTCTTTGCCTGTGTGCCAGAGTAGCCTCAGCCTGCAGCAGTCAGCTCCCCCGCCTGTCTTTCTCTCTCACAGTGTTGCACTTAATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp GGGGCCGCAATGCTCGGAGCACTGCTGTTGGGCGGTAAAGCCAAGTaGGTCACTGGTTTTGGAGCAATATGCATCTGCTTCAGAAACCCA +
Preference number: 5 (lower is better)
Translates to: GAAMLGALLLGGKAK*VTGFGAICICFRNP
Trigger: TGGGTTTCTGAAGCAGATGCATATTGCTCCAAAACCAGTGACCCACTTGGCTTTACCGCCCAACAGCAGTGCTCCGAGCATTGCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp TTGCAAACCGGGCATGTTTTCCACTGCTTCGCCTGTTTGAGTGCCTaGTTTGCATCTGCCAGCGGCGGGGTAGCCTGCACAAACACACTA +
Preference number: 5 (lower is better)
Translates to: LQTGHVFHCFACLSA*FASASGGVACTNTL
Trigger: TAGTGTGTTTGTGCAGGCTACCCCGCCGCTGGCAGATGCAAATCAGGCACTCAAACAGGCGAAGCAGTGGAAAACATGCCCGGTTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp CATCATGAAAAGTGCACGGACAAAACAGGCAGCCCAGGCCATGCATaGGCAAATGGTGCATCAGCTCCTCCTGCGAGACCAGGCACTTAC +
Preference number: 5 (lower is better)
Translates to: HHEKCTDKTGSPGHA*ANGASAPPARPGTY
Trigger: GTAAGTGCCTGGTCTCGCAGGAGGAGCTGATGCACCATTTGCTCATGCATGGCCTGGGCTGCCTGTTTTGTCCGTGCACTTTTCATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp GAAGTAAAGAAAGTAGTGTTTTGTGACGTTCCAGCTCTCACCGGCTaGCTCATAGGCAGGATGCTGGTGCTGACAGACGGGCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: EVKKVVFCDVPALTG*LIGRMLVLTDGLSC
Trigger: GCAGCTCAGCCCGTCTGTCAGCACCAGCATCCTGCCTATGAGCCAGCCGGTGAGAGCTGGAACGTCACAAAACACTACTTTCTTTACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp TGCTGTCCTTGGGAGCACTTCTACAACGGAGCAAATGGACAGCGATaGCGCCTAAGGTCATGTTTCCAGTGTAGACCCCGCAACAGTGGA +
Preference number: 5 (lower is better)
Translates to: CCPWEHFYNGANGQR*RLRSCFQCRPRNSG
Trigger: TCCACTGTTGCGGGGTCTACACTGGAAACATGACCTTAGGCGCCATCGCTGTCCATTTGCTCCGTTGTAGAAGTGCTCCCAAGGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp TCAAGTGTGTCCTTAGGGGCCACACACATCCAGAGCACTGGCTTCTCTAGACACTCTGAGCTGCTGTCCTaGGGAGCACTTCTACAACGG +
Preference number: 5 (lower is better)
Translates to: SSVSLGATHIQSTGFSRHSELLS*GALLQR
Trigger: CCGTTGTAGAAGTGCTCCCAAGGACAGCAGCTCAGA...GTGTCTAGAGAAGCCAGTGCTCTGGATGTGTGTGGCCCCTAAGGACACACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 90 bp TTGACCATCAGCAGTTCACTGCTCTCAATAAATCCGGGCTGGACTTaGAGGTCTGAGCTGCTGTCCTTGGGAGCACTTCTACAACGGAGC +
Preference number: 5 (lower is better)
Translates to: LTISSSLLSINPGWT*RSELLSLGALLQRS
Trigger: GCTCCGTTGTAGAAGTGCTCCCAAGGACAGCAGCTCAGACCTGCAAGTCCAGCCCGGATTTATTGAGAGCAGTGAACTGCTGATGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp CCGCAACAGTGGATGCACTTAAAGGCCGGAGACCTGAGCATTGTATaGACTGTGGGCATGACATGGTGCCTCTCCTTCAAGTGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: PQQWMHLKAGDLSIV*TVGMTWCLSFKCSS
Trigger: TGAGCTACACTTGAAGGAGAGGCACCATGTCATGCCCACAGTCCATACAATGCTCAGGTCTCCGGCCTTTAAGTGCATCCACTGTTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 90 bp GGACAGCTTGGTTCACGGAGCACATGGCTTGGTTCACAGGAAGGATaGTTGTTCCAACAGACTTATTCACAGGCCCAACTGGCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: GQLGSRSTWLGSQEG*LFQQTYSQAQLAES
Trigger: TGACTCAGCCAGTTGGGCCTGTGAATAAGTCTGTTGGAACAAGCATCCTTCCTGTGAACCAAGCCATGTGCTCCGTGAACCAAGCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp GGTAAAAGTCCAGGGCGGACAGCTTGGTTCACGGAGCACATGGCTTaGTTCACAGGAAGGATGCTTGTTCCAACAGACTTATTCACAGGC +
Preference number: 5 (lower is better)
Translates to: GKSPGRTAWFTEHMA*FTGRMLVPTDLFTG
Trigger: GCCTGTGAATAAGTCTGTTGGAACAAGCATCCTTCCTGTGAACCAAGCCATGTGCTCCGTGAACCAAGCTGTCCGCCCTGGACTTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp TCCCCATTGACCATCAGCAGTTCACTGCTCTCAATAAATCCGGGCTaGACTTGCAGGTCTGAGCTGCTGTCCTTGGGAGCACTTCTACAA +
Preference number: 5 (lower is better)
Translates to: SPLTISSSLLSINPG*TCRSELLSLGALLQ
Trigger: TTGTAGAAGTGCTCCCAAGGACAGCAGCTCAGACCTGCAAGTCCAGCCCGGATTTATTGAGAGCAGTGAACTGCTGATGGTCAATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp TGTGTCTCAGTCAAGAGCAGGACCCACATGTCTGTCCCGGGTTCCTCCTTCCTGAGAAACCCAGTCCTCTaGATGTGTTCTGAGATCACA +
Preference number: 5 (lower is better)
Translates to: CVSVKSRTHMSVPGSSFLRNPVL*MCSEIT
Trigger: TGTGATCTCAGAACACATCAAGAGGACTGGGTTTCT...CAGGAAGGAGGAACCCGGGACAGACATGTGGGTCCTGCTCTTGACTGAGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp CCTCAGACACTTAGAACAAGAGTGAGAGGTGGGAATGGGATGTCCAAAGTCAGCAGGGGACAGTCTGGTTaGAGGAAAGCAGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: PQTLRTRVRGGNGMSKVSRGQSG*RKAAQM
Trigger: CATCTGGGCTGCTTTCCTCAAACCAGACTGTCCCCT...GCTGACTTTGGACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTGTCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp CGCTCTCCAAGTTTCTCTCGTGGCAGTATGGTGATGAAATCGAGATaGGGGAAGAGCAGGTTCCCATTAGCATCCAGGTCCAGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: RSPSFSRGSMVMKSR*GKSRFPLASRSSWK
Trigger: CTTCCAACTGGACCTGGATGCTAATGGGAACCTGCTCTTCCCTCATCTCGATTTCATCACCATACTGCCACGAGAGAAACTTGGAGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 90 bp CCACTTCCATGTGAACCTGGTAGACATTGGCAGGAAAGAGTTCATTaGAAACCTGGCAGAGCTGAGCCTCACTCTGCTTGTGAGCCACTT +
Preference number: 5 (lower is better)
Translates to: PLPCEPGRHWQERVH*KPGRAEPHSACEPL
Trigger: AAGTGGCTCACAAGCAGAGTGAGGCTCAGCTCTGCCAGGTTTGCAATGAACTCTTTCCTGCCAATGTCTACCAGGTTCACATGGAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp CCTCACTCTGCTTGTGAGCCACTTCCATGTGAACCTGATAGACATTaGAAGGGAAGAGCTCGTTGCAAACCGGGCATGTTTTCCACTGCT +
Preference number: 5 (lower is better)
Translates to: PHSACEPLPCEPDRH*KGRARCKPGMFSTA
Trigger: AGCAGTGGAAAACATGCCCGGTTTGCAACGAGCTCTTCCCTTCCAATGTCTATCAGGTTCACATGGAAGTGGCTCACAAGCAGAGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp AGCAAGGATAGCCAGGTACACTTCTCGCTCTCCAAGTTTCTCTCGTaGCAGTATGGTGATGAAATCGAGATGAGGGAAGAGCAGGTTCCC +
Preference number: 5 (lower is better)
Translates to: SKDSQVHFSLSKFLS*QYGDEIEMREEQVP
Trigger: GGGAACCTGCTCTTCCCTCATCTCGATTTCATCACCATACTGCCACGAGAGAAACTTGGAGAGCGAGAAGTGTACCTGGCTATCCTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp GCTTCCTTTTCAGGCTTTCTGAGCACCTGGAACGCCTTGAAGGGCCTCAGACACCAGGTCAGCTTCTGTTaGTTAGGTATCTTTGGTGCA +
Preference number: 5 (lower is better)
Translates to: ASFSGFLSTWNALKGLRHQVSFC*LGIFGA
Trigger: TGCACCAAAGATACCTAACAAACAGAAGCTGACCTG...GTGTCTGAGGCCCTTCAAGGCGTTCCAGGTGCTCAGAAAGCCTGAAAAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp ATAGCAACACTGCAGTGCTTCTCAGAGGCCATCAAGCCCTCATATTCTGAAGGTGGGATCACGTCCCCATaGACCATCAGCAGTTCACTG +
Preference number: 5 (lower is better)
Translates to: IATLQCFSEAIKPSYSEGGITSP*TISSSL
Trigger: CAGTGAACTGCTGATGGTCAATGGGGACGTGATCCC...ACCTTCAGAATATGAGGGCTTGATGGCCTCTGAGAAGCACTGCAGTGTTGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp CAGGTCAGCTTCTGTTTGTTAGGTATCTTTGGTGCAACCTCAGGCTaGGGCCTCACCTTAACATACACAGGTACCAGCGACTTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: QVSFCLLGIFGATSG*GLTLTYTGTSDLEC
Trigger: ACACTCCAAGTCGCTGGTACCTGTGTATGTTAAGGTGAGGCCTCAGCCTGAGGTTGCACCAAAGATACCTAACAAACAGAAGCTGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 90 bp ACAAGACAGGCAGCGCACTGTCTTCTCTCGCATCCACTTCAGAAATaGGGCACATGCAGCAAGCTTTTCAGGCTCAAGTTTCTCACTAGA +
Preference number: 5 (lower is better)
Translates to: TRQAAHCLLSHPLQK*GTCSKLFRLKFLTR
Trigger: TCTAGTGAGAAACTTGAGCCTGAAAAGCTTGCTGCATGTGCCCCATTTCTGAAGTGGATGCGAGAGAAGACAGTGCGCTGCCTGTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp GCTTCCTTTTCAGGCTTTCTGAGCACCTGGAACGCCTTGAAGGGCCTCAGACACTCACAGGAAGGATGCTaGTTCCAACAGACTTATTCA +
Preference number: 5 (lower is better)
Translates to: ASFSGFLSTWNALKGLRHSQEGC*FQQTYS
Trigger: TGAATAAGTCTGTTGGAACAAGCATCCTTCCTGTGA...GTGTCTGAGGCCCTTCAAGGCGTTCCAGGTGCTCAGAAAGCCTGAAAAGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp CCTCAGACACTTAGAACAAGAGTGAGAGGTGGGAATGGGATGTCCAAAGTCAGCATCGCTTGCTTTTGGTaGCTCTCCTGTTTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: PQTLRTRVRGGNGMSKVSIACFW*LSCFLS
Trigger: ACTGAGGAAACAGGAGAGCAACCAAAAGCAAGCGAT...GCTGACTTTGGACATCCCATTCCCACCTCTCACTCTTGTTCTAAGTGTCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp ACAGAAGGAAAAACTGAAACAGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTCACAGTGCCAGAGCTTaGACTGTTCTGTGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: TEGKTETAAKRTAENSSSHSARA*TVLWQS
Trigger: GCTTTGCCACAGAACAGTCAAAGCTCTGGCACTGTG...AGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCTGTTTCAGTTTTTCCTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp ACAGAAGGAAAAACTGAAACAGCCGCAAAGCGAACTGCAGAGAACAGCTCATCTCGCACCTTCCTGATGTaGTCAAGATTCTGCACAGGA +
Preference number: 5 (lower is better)
Translates to: TEGKTETAAKRTAENSSSRTFLM*SRFCTG
Trigger: TCCTGTGCAGAATCTTGACAACATCAGGAAGGTGCG...AGATGAGCTGTTCTCTGCAGTTCGCTTTGCGGCTGTTTCAGTTTTTCCTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp AGCAATATGCATCTGCTTCAGAAACCCAGTCCTCTTGATGTGTTCTaGGATCACAGACCTCAGCTTATTCTCCAAGTCCCTATGTGCATC +
Preference number: 5 (lower is better)
Translates to: SNMHLLQKPSPLDVF*DHRPQLILQVPMCI
Trigger: GATGCACATAGGGACTTGGAGAATAAGCTGAGGTCTGTGATCTCAGAACACATCAAGAGGACTGGGTTTCTGAAGCAGATGCATATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp AGGGAACACTTGAAAAGGTGTAAATCAAATCTGTGTCTTAAACAAACAGCACTCAACATTCTGAAGTGCTaGCCCACCACCCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: REHLKRCKSNLCLKQTALNILKC*PTTLGW
Trigger: CCAGCCCAGGGTGGTGGGCAAGCACTTCAGAATGTT...GAGTGCTGTTTGTTTAAGACACAGATTTGATTTACACCTTTTCAAGTGTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp ACTGACACTCGTGGGGAAACAAGGCGTGCATGGAATACCAAAGATTTAATTTACCAGGATCGCTTGCTTTaGGTTGCTCTCCTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: TDTRGETRRAWNTKDLIYQDRLL*VALLFP
Trigger: AGGAAACAGGAGAGCAACCAAAAGCAAGCGATCCTG...GTAAATTAAATCTTTGGTATTCCATGCACGCCTTGTTTCCCCACGAGTGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS-3UTR CAA 90 bp AGGGAACACTTGAAAAGGTGTAAATCAAATCTGTGTCTTAAACAAACAGCACTCCACGGAGCACATGGCTaGGTTCACAGGAAGGATGCT +
Preference number: 5 (lower is better)
Translates to: REHLKRCKSNLCLKQTALHGAHG*VHRKDA
Trigger: AGCATCCTTCCTGTGAACCAAGCCATGTGCTCCGTG...GAGTGCTGTTTGTTTAAGACACAGATTTGATTTACACCTTTTCAAGTGTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 90 bp ATGATATCGATGCAGGTGATTTTTGAGGGAAGTGAGCACCTTTGTTaGGTACCTACAGAGACTACAGCAGTATGGTTTTGTCCGGTATCT +
Preference number: 5 (lower is better)
Translates to: MISMQVIFEGSEHLC*VPTETTAVWFCPVS
Trigger: AGATACCGGACAAAACCATACTGCTGTAGTCTCTGTAGGTACTCAACAAAGGTGCTCACTTCCCTCAAAAATCACCTGCATCGATATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 90 bp GTACTTGTCAAATGGCAGGATTTTATCCACAGAAACAGGATCGCTTaGTTTTGGTTGCTCTCCTGTTTCCTCAGTTCGCAAACCAAAGTA +
Preference number: 5 (lower is better)
Translates to: VLVKWQDFIHRNRIA*FWLLSCFLSSQTKV
Trigger: TACTTTGGTTTGCGAACTGAGGAAACAGGAGAGCAACCAAAAGCAAGCGATCCTGTTTCTGTGGATAAAATCCTGCCATTTGACAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp GGGCAGGGCTCACCAACACCTGTGGAGAGGGCAGGCTaGGCAAGGAGCTGCCCATCTGTGTGCCCGAGCCTG +
Preference number: 6 (lower is better)
Translates to: GQGSPTPVERAG*ARSCPSVCPSL
Trigger: CAGGCTCGGGCACACAGATGGGCAGCTCCTTGCCCAGCCTGCCCTCTCCACAGGTGTTGGTGAGCCCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp GAACTGCACTGGCACCTGGGGTGGCGGTCCAACAGCTaGAAGGCCTCCACCAGAGGGCACCGGCAGAGTGAC +
Preference number: 6 (lower is better)
Translates to: ELHWHLGWRSNS*KASTRGHRQSD
Trigger: GTCACTCTGCCGGTGCCCTCTGGTGGAGGCCTTGCAGCTGTTGGACCGCCACCCCAGGTGCCAGTGCAGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp CTGCCCATCTGTGTGCCCGAGCCTGAGGGCAAGAACTaGACTGGCACCTGGGGTGGCGGTCCAACAGCTGCA +
Preference number: 6 (lower is better)
Translates to: LPICVPEPEGKN*TGTWGGGPTAA
Trigger: TGCAGCTGTTGGACCGCCACCCCAGGTGCCAGTGCAGTTCTTGCCCTCAGGCTCGGGCACACAGATGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp GACAGACGGGCTGAGCTGCAGTACCCCAGGCCTCACTaGGGGGCCCACAGGAAGCACTCCTGGTGTTACTGG +
Preference number: 6 (lower is better)
Translates to: DRRAELQYPRPH*GAHRKHSWCYW
Trigger: CCAGTAACACCAGGAGTGCTTCCTGTGGGCCCCCCAGTGAGGCCTGGGGTACTGCAGCTCAGCCCGTCTGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp CCAACACCTGTGGAGAGGGCAGGCTGGGCAAGGAGCTaGCCATCTGTGTGCCCGAGCCTGAGGGCAAGAACT +
Preference number: 6 (lower is better)
Translates to: PTPVERAGWARS*PSVCPSLRART
Trigger: AGTTCTTGCCCTCAGGCTCGGGCACACAGATGGGCAGCTCCTTGCCCAGCCTGCCCTCTCCACAGGTGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp TGGACTTTGCGTGCAGGCGCGTGGAACATTCTGAAGTaGTTGCCCACCACCCTGGGCTGGGAGGAGAACGGG +
Preference number: 6 (lower is better)
Translates to: WTLRAGAWNILK*LPTTLGWEENG
Trigger: CCCGTTCTCCTCCCAGCCCAGGGTGGTGGGCAAGCACTTCAGAATGTTCCACGCGCCTGCACGCAAAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 72 bp ACTTTGCGTGCAGGCGCGTGGAACATTCTGAAGTGCTaGCCCACCACCCTGGGCTGGGAGGAGAACGGGCAG +
Preference number: 6 (lower is better)
Translates to: TLRAGAWNILKC*PTTLGWEENGQ
Trigger: CTGCCCGTTCTCCTCCCAGCCCAGGGTGGTGGGCAAGCACTTCAGAATGTTCCACGCGCCTGCACGCAAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 72 bp AGCTCTGGACTTTGCGTGCAGGCGCGTGGAACATTCTaGAGTGCTTGCCCACCACCCTGGGCTGGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: SSGLCVQARGTF*SACPPPWAGRR
Trigger: TCTCCTCCCAGCCCAGGGTGGTGGGCAAGCACTTCAGAATGTTCCACGCGCCTGCACGCAAAGTCCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp GCAAAGCAAGCTGGAAGCAGGGTGGAGGGGCCGCAATaGTCGGAGCACTGCTGTTGGGCGGTAAAGCCAAGT +
Preference number: 6 (lower is better)
Translates to: AKQAGSRVEGPQ*SEHCCWAVKPS
Trigger: ACTTGGCTTTACCGCCCAACAGCAGTGCTCCGAGCATTGCGGCCCCTCCACCCTGCTTCCAGCTTGCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp TGGAACATTCTGAAGTGCTTGCCCACCACCCTGGGCTaGGAGGAGAACGGGCAGTTGGGGCAGGGGATCATC +
Preference number: 6 (lower is better)
Translates to: WNILKCLPTTLG*EENGQLGQGII
Trigger: GATGATCCCCTGCCCCAACTGCCCGTTCTCCTCCCAGCCCAGGGTGGTGGGCAAGCACTTCAGAATGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp AGGGTGGAGGGGCCGCAATGCTCGGAGCACTGCTGTTaGGCGGTAAAGCCAAGTGGGTCACTGGTTTTGGAG +
Preference number: 6 (lower is better)
Translates to: RVEGPQCSEHCC*AVKPSGSLVLE
Trigger: CTCCAAAACCAGTGACCCACTTGGCTTTACCGCCCAACAGCAGTGCTCCGAGCATTGCGGCCCCTCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp TCTGAACCCGAACTTGCATCAGCATCTAGGGTGAGCTaGGGCTCCTCCCCATCCCTCTGGTCTTCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: SEPELASASRVS*GSSPSLWSSGP
Trigger: AGGGCCGGAAGACCAGAGGGATGGGGAGGAGCCCCAGCTCACCCTAGATGCTGATGCAAGTTCGGGTTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 72 bp AGAGAAAGACAGGCGGGGGAGCTGACTGCTGCAGGCTaGGGCTACTCTGGCACACAGGCAAAGAGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: RERQAGELTAAG*GYSGTQAKSWR
Trigger: TCTCCAGCTCTTTGCCTGTGTGCCAGAGTAGCCTCAGCCTGCAGCAGTCAGCTCCCCCGCCTGTCTTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp GGAGACCAAAGCTACGTGAGACTGGGCAGTGGTAGGTaGGGAGTGTGTAAGGCTCCCAGAAGTGCCTGGGGT +
Preference number: 6 (lower is better)
Translates to: GDQSYVRLGSGR*GVCKAPRSAWG
Trigger: ACCCCAGGCACTTCTGGGAGCCTTACACACTCCCCACCTACCACTGCCCAGTCTCACGTAGCTTTGGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 90 bp AGCTGGAAGCAGGGTGGAGGGGCCGCAATGCTCGGAGCACTGCTGTaGGGCGGTAAAGCCAAGTGGGTCACTGGTTTTGGAGCAATATGC +
Preference number: 6 (lower is better)
Translates to: SWKQGGGAAMLGALL*GGKAKWVTGFGAIC
Trigger: GCATATTGCTCCAAAACCAGTGACCCACTTGGCTTTACCGCCCAACAGCAGTGCTCCGAGCATTGCGGCCCCTCCACCCTGCTTCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 72 bp GGGCATGTTTTCCACTGCTTCGCCTGTTTGAGTGCCTaGTTTGCATCTGCCAGCGGCGGGGTAGCCTGCACA +
Preference number: 6 (lower is better)
Translates to: GHVFHCFACLSA*FASASGGVACT
Trigger: TGTGCAGGCTACCCCGCCGCTGGCAGATGCAAATCAGGCACTCAAACAGGCGAAGCAGTGGAAAACATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 72 bp GCAGTGAGTCTTCACTGGGCCCCGACCCCTCCGTCCTaGTTTCACTCTTCTGTCTCTTCAAAGGCACAGCGC +
Preference number: 6 (lower is better)
Translates to: AVSLHWAPTPPS*FHSSVSSKAQR
Trigger: GCGCTGTGCCTTTGAAGAGACAGAAGAGTGAAATCAGGACGGAGGGGTCGGGGCCCAGTGAAGACTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp CCACTGCTTCGCCTGTTTGAGTGCCTGATTTGCATCTaGCAGCGGCGGGGTAGCCTGCACAAACACACTAGG +
Preference number: 6 (lower is better)
Translates to: PLLRLFECLICI*QRRGSLHKHTR
Trigger: CCTAGTGTGTTTGTGCAGGCTACCCCGCCGCTGGCAGATGCAAATCAGGCACTCAAACAGGCGAAGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp AACCGGGCATGTTTTCCACTGCTTCGCCTGTTTGAGTaGCTGATTTGCATCTGCCAGCGGCGGGGTAGCCTG +
Preference number: 6 (lower is better)
Translates to: NRACFPLLRLFE*LICICQRRGSL
Trigger: CAGGCTACCCCGCCGCTGGCAGATGCAAATCAGGCACTCAAACAGGCGAAGCAGTGGAAAACATGCCCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 90 bp CAGGAGGAAGACCTCGAGAAGGAGCTGTCTGGCCAACAGGAAGAGTaGATGACTGAACCACCTGGCCAGTGGGTAAGACCCCAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: QEEDLEKELSGQQEE*MTEPPGQWVRPQKW
Trigger: CCACTTCTGGGGTCTTACCCACTGGCCAGGTGGTTCAGTCATCAACTCTTCCTGTTGGCCAGACAGCTCCTTCTCGAGGTCTTCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp GGCTTAGTGAGGGGTAAAAGTCCAGGGCGGACAGCTTaGTTCACGGAGCACATGGCTTGGTTCACAGGAAGG +
Preference number: 6 (lower is better)
Translates to: GLVRGKSPGRTA*FTEHMAWFTGR
Trigger: CCTTCCTGTGAACCAAGCCATGTGCTCCGTGAACCAAGCTGTCCGCCCTGGACTTTTACCCCTCACTAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp GGACAAAACAGGCAGCCCAGGCCATGCATGAGCAAATaGTGCATCAGCTCCTCCTGCGAGACCAGGCACTTA +
Preference number: 6 (lower is better)
Translates to: GQNRQPRPCMSK*CISSSCETRHL
Trigger: TAAGTGCCTGGTCTCGCAGGAGGAGCTGATGCACCATTTGCTCATGCATGGCCTGGGCTGCCTGTTTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp ATCCGGGCTGGACTTGCAGGTCTGAGCTGCTGTCCTTaGGAGCACTTCTACAACGGAGCAAATGGACAGCGA +
Preference number: 6 (lower is better)
Translates to: IRAGLAGLSCCP*EHFYNGANGQR
Trigger: TCGCTGTCCATTTGCTCCGTTGTAGAAGTGCTCCCAAGGACAGCAGCTCAGACCTGCAAGTCCAGCCCGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 72 bp GACCTCGAGAAGGAGCTGTCTGGCCAACAGGAAGAGTaGATGACTGAACCACCTGGCCAGTGGGTAAGACCC +
Preference number: 6 (lower is better)
Translates to: DLEKELSGQQEE*MTEPPGQWVRP
Trigger: GGGTCTTACCCACTGGCCAGGTGGTTCAGTCATCAACTCTTCCTGTTGGCCAGACAGCTCCTTCTCGAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 72 bp AATCCGGGCTGGACTTGCAGGTCTGAGCTGCTGTCCTaGGGAGCACTTCTACAACGGAGCAAATGGACAGCG +
Preference number: 6 (lower is better)
Translates to: NPGWTCRSELLS*GALLQRSKWTA
Trigger: CGCTGTCCATTTGCTCCGTTGTAGAAGTGCTCCCAAGGACAGCAGCTCAGACCTGCAAGTCCAGCCCGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 90 bp CTCTCAATAAATCCGGGCTGGACTTGCAGGTCTGAGCTGCTGTCCTaGGGAGCACTTCTACAACGGAGCAAATGGACAGCGATGGCGCCT +
Preference number: 6 (lower is better)
Translates to: LSINPGWTCRSELLS*GALLQRSKWTAMAP
Trigger: AGGCGCCATCGCTGTCCATTTGCTCCGTTGTAGAAGTGCTCCCAAGGACAGCAGCTCAGACCTGCAAGTCCAGCCCGGATTTATTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 72 bp GGGGTCACAGTCACTGACTGCACAGTGCCAGAGCTTTaGCTGTTCTGTGGCAAAGCAAGCTGGAAGCAGGGT +
Preference number: 6 (lower is better)
Translates to: GVTVTDCTVPEL*LFCGKASWKQG
Trigger: ACCCTGCTTCCAGCTTGCTTTGCCACAGAACAGTCAAAGCTCTGGCACTGTGCAGTCAGTGACTGTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 72 bp GAAGGAGCTGTCTGGCCAACAGGAAGAGTTGATGACTaGACCACCTGGCCAGTGGGTAAGACCCCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: EGAVWPTGRVDD*TTWPVGKTPEV
Trigger: CACTTCTGGGGTCTTACCCACTGGCCAGGTGGTTCAGTCATCAACTCTTCCTGTTGGCCAGACAGCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp TGTTTTCCACTGCTTCGCCTGTTTGAGTGCCTGATTTaGATCTGCCAGCGGCGGGGTAGCCTGCACAAACAC +
Preference number: 6 (lower is better)
Translates to: CFPLLRLFECLI*ICQRRGSLHKH
Trigger: GTGTTTGTGCAGGCTACCCCGCCGCTGGCAGATGCAAATCAGGCACTCAAACAGGCGAAGCAGTGGAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp AAAGTAGTGTTTTGTGACGTTCCAGCTCTCACCGGCTaGCTCATAGGCAGGATGCTGGTGCTGACAGACGGG +
Preference number: 6 (lower is better)
Translates to: KVVFCDVPALTG*LIGRMLVLTDG
Trigger: CCCGTCTGTCAGCACCAGCATCCTGCCTATGAGCCAGCCGGTGAGAGCTGGAACGTCACAAAACACTACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp TGGGAGCACTTCTACAACGGAGCAAATGGACAGCGATaGCGCCTAAGGTCATGTTTCCAGTGTAGACCCCGC +
Preference number: 6 (lower is better)
Translates to: WEHFYNGANGQR*RLRSCFQCRPR
Trigger: GCGGGGTCTACACTGGAAACATGACCTTAGGCGCCATCGCTGTCCATTTGCTCCGTTGTAGAAGTGCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp GTTTCTTTTCCTCGTAGGAACGCCCTTCGTACTTGCTaGGGTCCAAGGCTAGCGCCTGCAGTGAGTCTTCAC +
Preference number: 6 (lower is better)
Translates to: VSFPRRNALRTC*GPRLAPAVSLH
Trigger: GTGAAGACTCACTGCAGGCGCTAGCCTTGGACCCCAGCAAGTACGAAGGGCGTTCCTACGAGGAAAAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp CCAGGGCGGACAGCTTGGTTCACGGAGCACATGGCTTaGTTCACAGGAAGGATGCTTGTTCCAACAGACTTA +
Preference number: 6 (lower is better)
Translates to: PGRTAWFTEHMA*FTGRMLVPTDL
Trigger: TAAGTCTGTTGGAACAAGCATCCTTCCTGTGAACCAAGCCATGTGCTCCGTGAACCAAGCTGTCCGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp CTGCTGTCCTTGGGAGCACTTCTACAACGGAGCAAATaGACAGCGATGGCGCCTAAGGTCATGTTTCCAGTG +
Preference number: 6 (lower is better)
Translates to: LLSLGALLQRSK*TAMAPKVMFPV
Trigger: CACTGGAAACATGACCTTAGGCGCCATCGCTGTCCATTTGCTCCGTTGTAGAAGTGCTCCCAAGGACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp ACCATCAGCAGTTCACTGCTCTCAATAAATCCGGGCTaGACTTGCAGGTCTGAGCTGCTGTCCTTGGGAGCA +
Preference number: 6 (lower is better)
Translates to: TISSSLLSINPG*TCRSELLSLGA
Trigger: TGCTCCCAAGGACAGCAGCTCAGACCTGCAAGTCCAGCCCGGATTTATTGAGAGCAGTGAACTGCTGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 90 bp CAGCTTGGTTCACGGAGCACATGGCTTGGTTCACAGGAAGGATGCTaGTTCCAACAGACTTATTCACAGGCCCAACTGGCTGAGTCAGGG +
Preference number: 6 (lower is better)
Translates to: QLGSRSTWLGSQEGC*FQQTYSQAQLAESG
Trigger: CCCTGACTCAGCCAGTTGGGCCTGTGAATAAGTCTGTTGGAACAAGCATCCTTCCTGTGAACCAAGCCATGTGCTCCGTGAACCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp AGCAGTTCACTGCTCTCAATAAATCCGGGCTGGACTTaGAGGTCTGAGCTGCTGTCCTTGGGAGCACTTCTA +
Preference number: 6 (lower is better)
Translates to: SSSLLSINPGWT*RSELLSLGALL
Trigger: TAGAAGTGCTCCCAAGGACAGCAGCTCAGACCTGCAAGTCCAGCCCGGATTTATTGAGAGCAGTGAACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp ATGCTCGGAGCACTGCTGTTGGGCGGTAAAGCCAAGTaGGTCACTGGTTTTGGAGCAATATGCATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: MLGALLLGGKAK*VTGFGAICICF
Trigger: GAAGCAGATGCATATTGCTCCAAAACCAGTGACCCACTTGGCTTTACCGCCCAACAGCAGTGCTCCGAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp TGGATGCACTTAAAGGCCGGAGACCTGAGCATTGTATaGACTGTGGGCATGACATGGTGCCTCTCCTTCAAG +
Preference number: 6 (lower is better)
Translates to: WMHLKAGDLSIV*TVGMTWCLSFK
Trigger: CTTGAAGGAGAGGCACCATGTCATGCCCACAGTCCATACAATGCTCAGGTCTCCGGCCTTTAAGTGCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp GGTTCACGGAGCACATGGCTTGGTTCACAGGAAGGATaGTTGTTCCAACAGACTTATTCACAGGCCCAACTG +
Preference number: 6 (lower is better)
Translates to: GSRSTWLGSQEG*LFQQTYSQAQL
Trigger: CAGTTGGGCCTGTGAATAAGTCTGTTGGAACAAGCATCCTTCCTGTGAACCAAGCCATGTGCTCCGTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 72 bp TGCTGTTGGGCGGTAAAGCCAAGTGGGTCACTGGTTTaGGAGCAATATGCATCTGCTTCAGAAACCCAGTCC +
Preference number: 6 (lower is better)
Translates to: CCWAVKPSGSLV*EQYASASETQS
Trigger: GGACTGGGTTTCTGAAGCAGATGCATATTGCTCCAAAACCAGTGACCCACTTGGCTTTACCGCCCAACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 72 bp AGTTTCTCTCGTGGCAGTATGGTGATGAAATCGAGATaGGGGAAGAGCAGGTTCCCATTAGCATCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SFSRGSMVMKSR*GKSRFPLASRS
Trigger: GGACCTGGATGCTAATGGGAACCTGCTCTTCCCTCATCTCGATTTCATCACCATACTGCCACGAGAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp TGTGAACCTGATAGACATTGGAAGGGAAGAGCTCGTTaGAAACCGGGCATGTTTTCCACTGCTTCGCCTGTT +
Preference number: 6 (lower is better)
Translates to: CEPDRHWKGRAR*KPGMFSTASPV
Trigger: AACAGGCGAAGCAGTGGAAAACATGCCCGGTTTGCAACGAGCTCTTCCCTTCCAATGTCTATCAGGTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp TGTGAACCTGGTAGACATTGGCAGGAAAGAGTTCATTaGAAACCTGGCAGAGCTGAGCCTCACTCTGCTTGT +
Preference number: 6 (lower is better)
Translates to: CEPGRHWQERVH*KPGRAEPHSAC
Trigger: ACAAGCAGAGTGAGGCTCAGCTCTGCCAGGTTTGCAATGAACTCTTTCCTGCCAATGTCTACCAGGTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp GCTTGTGAGCCACTTCCATGTGAACCTGATAGACATTaGAAGGGAAGAGCTCGTTGCAAACCGGGCATGTTT +
Preference number: 6 (lower is better)
Translates to: ACEPLPCEPDRH*KGRARCKPGMF
Trigger: AAACATGCCCGGTTTGCAACGAGCTCTTCCCTTCCAATGTCTATCAGGTTCACATGGAAGTGGCTCACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 90 bp ATCGAGATGAGGGAAGAGCAGGTTCCCATTAGCATCCAGGTCCAGTaGGAAGCCTCTGTTACTGTAATCCATAGACAGTCTCTTCTTGCC +
Preference number: 6 (lower is better)
Translates to: IEMREEQVPISIQVQ*EASVTVIHRQSLLA
Trigger: GGCAAGAAGAGACTGTCTATGGATTACAGTAACAGAGGCTTCCAACTGGACCTGGATGCTAATGGGAACCTGCTCTTCCCTCATCTCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 72 bp TTCTGTTTGTTAGGTATCTTTGGTGCAACCTCAGGCTaGGGCCTCACCTTAACATACACAGGTACCAGCGAC +
Preference number: 6 (lower is better)
Translates to: FCLLGIFGATSG*GLTLTYTGTSD
Trigger: GTCGCTGGTACCTGTGTATGTTAAGGTGAGGCCTCAGCCTGAGGTTGCACCAAAGATACCTAACAAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 72 bp CATCTGCTTCAGAAACCCAGTCCTCTTGATGTGTTCTaGGATCACAGACCTCAGCTTATTCTCCAAGTCCCT +
Preference number: 6 (lower is better)
Translates to: HLLQKPSPLDVF*DHRPQLILQVP
Trigger: AGGGACTTGGAGAATAAGCTGAGGTCTGTGATCTCAGAACACATCAAGAGGACTGGGTTTCTGAAGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp AAATGGGCAGGTCAGCTTCTGTTTGTTAGGTATCTTTaGTGCAACCTCAGGCTGAGGCCTCACCTTAACATA +
Preference number: 6 (lower is better)
Translates to: KWAGQLLFVRYL*CNLRLRPHLNI
Trigger: TATGTTAAGGTGAGGCCTCAGCCTGAGGTTGCACCAAAGATACCTAACAAACAGAAGCTGACCTGCCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 72 bp CCTGGATCAAAGCTTTTAAGATCCTTCATCAGCTCCTaGCAGCTGTCAAGGCCAATATCCACAAGGATGCCT +
Preference number: 6 (lower is better)
Translates to: PGSKLLRSFISS*QLSRPISTRMP
Trigger: AGGCATCCTTGTGGATATTGGCCTTGACAGCTGCAAGGAGCTGATGAAGGATCTTAAAAGCTTTGATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 90 bp ACTGGTTTTGGAGCAATATGCATCTGCTTCAGAAACCCAGTCCTCTaGATGTGTTCTGAGATCACAGACCTCAGCTTATTCTCCAAGTCC +
Preference number: 6 (lower is better)
Translates to: TGFGAICICFRNPVL*MCSEITDLSLFSKS
Trigger: GGACTTGGAGAATAAGCTGAGGTCTGTGATCTCAGAACACATCAAGAGGACTGGGTTTCTGAAGCAGATGCATATTGCTCCAAAACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 72 bp TTGTTGAGTACCTACAGAGACTACAGCAGTATGGTTTaGTCCGGTATCTCGCTTTCTTTCCAGAAGGTTCCC +
Preference number: 6 (lower is better)
Translates to: LLSTYRDYSSMV*SGISLSFQKVP
Trigger: GGGAACCTTCTGGAAAGAAAGCGAGATACCGGACAAAACCATACTGCTGTAGTCTCTGTAGGTACTCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 72 bp GCAGGATTTTATCCACAGAAACAGGATCGCTTGCTTTaGGTTGCTCTCCTGTTTCCTCAGTTCGCAAACCAA +
Preference number: 6 (lower is better)
Translates to: AGFYPQKQDRLL*VALLFPQFANQ
Trigger: TTGGTTTGCGAACTGAGGAAACAGGAGAGCAACCAAAAGCAAGCGATCCTGTTTCTGTGGATAAAATCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 72 bp CAAATGGCAGGATTTTATCCACAGAAACAGGATCGCTaGCTTTTGGTTGCTCTCCTGTTTCCTCAGTTCGCA +
Preference number: 6 (lower is better)
Translates to: QMAGFYPQKQDR*LLVALLFPQFA
Trigger: TGCGAACTGAGGAAACAGGAGAGCAACCAAAAGCAAGCGATCCTGTTTCTGTGGATAAAATCCTGCCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 90 bp TGTCAAATGGCAGGATTTTATCCACAGAAACAGGATCGCTTGCTTTaGGTTGCTCTCCTGTTTCCTCAGTTCGCAAACCAAAGTAGGAGT +
Preference number: 6 (lower is better)
Translates to: CQMAGFYPQKQDRLL*VALLFPQFANQSRS
Trigger: ACTCCTACTTTGGTTTGCGAACTGAGGAAACAGGAGAGCAACCAAAAGCAAGCGATCCTGTTTCTGTGGATAAAATCCTGCCATTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS GCA 72 bp AAATGGCAGGATTTTATCCACAGAAACAGGATCGCTTaGTTTTGGTTGCTCTCCTGTTTCCTCAGTTCGCAA +
Preference number: 6 (lower is better)
Translates to: KWQDFIHRNRIA*FWLLSCFLSSQ
Trigger: TTGCGAACTGAGGAAACAGGAGAGCAACCAAAAGCAAGCGATCCTGTTTCTGTGGATAAAATCCTGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CCA 72 bp ATAGGCATCCGCGGTCATAAATGTGCTCAAACAAAATaGGCAGGTCAGCTTCTGTTTGTTAGGTATCTTTGG +
Preference number: 6 (lower is better)
Translates to: IGIRGHKCAQTK*AGQLLFVRYLW
Trigger: CCAAAGATACCTAACAAACAGAAGCTGACCTGCCCATTTTGTTTGAGCACATTTATGACCGCGGATGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 90 bp AGTACTTGTCAAATGGCAGGATTTTATCCACAGAAACAGGATCGCTaGCTTTTGGTTGCTCTCCTGTTTCCTCAGTTCGCAAACCAAAGT +
Preference number: 6 (lower is better)
Translates to: STCQMAGFYPQKQDR*LLVALLFPQFANQS
Trigger: ACTTTGGTTTGCGAACTGAGGAAACAGGAGAGCAACCAAAAGCAAGCGATCCTGTTTCTGTGGATAAAATCCTGCCATTTGACAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS TCA 72 bp ATGCAGGTGATTTTTGAGGGAAGTGAGCACCTTTGTTaGGTACCTACAGAGACTACAGCAGTATGGTTTTGT +
Preference number: 6 (lower is better)
Translates to: MQVIFEGSEHLC*VPTETTAVWFC
Trigger: ACAAAACCATACTGCTGTAGTCTCTGTAGGTACTCAACAAAGGTGCTCACTTCCCTCAAAAATCACCTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11
CDS CAA 90 bp AAATGGCAGGATTTTATCCACAGAAACAGGATCGCTTGCTTTTGGTaGCTCTCCTGTTTCCTCAGTTCGCAAACCAAAGTAGGAGTTAAT +
Preference number: 6 (lower is better)
Translates to: KWQDFIHRNRIACFW*LSCFLSSQTKVGVN
Trigger: ATTAACTCCTACTTTGGTTTGCGAACTGAGGAAACAGGAGAGCAACCAAAAGCAAGCGATCCTGTTTCTGTGGATAAAATCCTGCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066743.11