Pregenerated sensors for ADNP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051149Ensembl transcript IDs: ENSMUST00000057793.11, ENSMUST00000088001.6
Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GAAATGCTGAGAAGGCAGGTAGGTAAGGAACTACTTCTCCCTGTGTaGATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCAC | + |
Preference number: 1 (lower is better) Translates to: EMLRRQVGKELLLPV*IHELPAYWFFTLHH Trigger: GTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTAGTTCCTTACCTACCTGCCTTCTCAGCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR TCA 90 bp | TACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTaGACAAAGATCAACCAGTCATCTATCATAGACTTGGAAATAACC | + |
Preference number: 1 (lower is better) Translates to: YWFFTLHHRVYQRRV*TKINQSSIIDLEIT Trigger: GGTTATTTCCAAGTCTATGATAGATGACTGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR TCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCAATCCCCACAGCCTGCTaGCTGACCAGTCCTTGCAAG | + |
Preference number: 2 (lower is better) Translates to: VVCMPALHYYVNQDKAFPIPTAC*LTSPCK Trigger: CTTGCAAGGACTGGTCAGTCAGCAGGCTGTGGGGAT...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR CCA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCCACTGAGACTACAGTaGTCACACATCCCCACAGCC | + |
Preference number: 2 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSPLRLQ*SHIPTA Trigger: GGCTGTGGGGATGTGTGACCACTGTAGTCTCAGTGG...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR TCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTATCCCCACAGCCTGCTaGCTGACCAGTCCTTGCAAG | + |
Preference number: 2 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLIPTAC*LTSPCK Trigger: CTTGCAAGGACTGGTCAGTCAGCAGGCTGTGGGGAT...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR GCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCACTACTTCTCCCTGTGTaGATTCATGAGCTACCAGCT | + |
Preference number: 2 (lower is better) Translates to: VVCMPALHYYVNQDKAFPLLLPV*IHELPA Trigger: AGCTGGTAGCTCATGAATGCACACAGGGAGAAGTAG...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR CCA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTCCACTGAGACTACAGTaGTCACACATCCCCACAGCC | + |
Preference number: 2 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFPLRLQ*SHIPTA Trigger: GGCTGTGGGGATGTGTGACCACTGTAGTCTCAGTGG...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR CCA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTGCTTTGCAGTCAGACTaGAAGGAGAGCAGAAGTCCA | + |
Preference number: 2 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFALQSD*KESRSP Trigger: TGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGC...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR CCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTGCTTTGCAGTCAGACTaGAAGGAGAGCAGAAGTCCA | + |
Preference number: 2 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLALQSD*KESRSP Trigger: TGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGC...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR TCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCCCCTGCACTACTATGTaGATCAGGATAAGGCTTTCC | + |
Preference number: 2 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIPCTTM*IRIRLS Trigger: GGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGG...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR GCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCAGTTAGAAGACAGCTTTaGAGTCAGACTGGAAGGAGA | + |
Preference number: 2 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPVRRQL*SQTGRR Trigger: TCTCCTTCCAGTCTGACTGCAAAGCTGTCTTCTAAC...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR TCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCATCCAACCAAACATCTaGGGGGAAGAAATGCTGAGA | + |
Preference number: 2 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIIQPNI*GEEMLR Trigger: TCTCAGCATTTCTTCCCCTCAGATGTTTGGTTGGAT...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR GCA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTCTACTTCTCCCTGTGTaGATTCATGAGCTACCAGCT | + |
Preference number: 2 (lower is better) Translates to: ESRYISYVAGLFCKIVQGLLLPV*IHELPA Trigger: AGCTGGTAGCTCATGAATGCACACAGGGAGAAGTAG...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR GCA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGGTTAGAAGACAGCTTTaGAGTCAGACTGGAAGGAGA | + |
Preference number: 2 (lower is better) Translates to: PDIYLMLLASFARLYKVMVRRQL*SQTGRR Trigger: TCTCCTTCCAGTCTGACTGCAAAGCTGTCTTCTAAC...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR TCA 72 bp | CTGAGACTACAGTGGTCACACATCCCCACAGCCTGCTaGCTGACCAGTCCTTGCAAGGTAGTGCCAGTTAGA | + |
Preference number: 3 (lower is better) Translates to: LRLQWSHIPTAC*LTSPCKVVPVR Trigger: TCTAACTGGCACTACCTTGCAAGGACTGGTCAGTCAGCAGGCTGTGGGGATGTGTGACCACTGTAGTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR TCA 72 bp | AGGATAAGGCTTTCCCAGGACATCCAACCAAACATCTaGGGGGAAGAAATGCTGAGAAGGCAGGTAGGTAAG | + |
Preference number: 3 (lower is better) Translates to: RIRLSQDIQPNI*GEEMLRRQVGK Trigger: CTTACCTACCTGCCTTCTCAGCATTTCTTCCCCTCAGATGTTTGGTTGGATGTCCTGGGAAAGCCTTATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR TCA 72 bp | CAACCAGTCATCTATCATAGACTTGGAAATAACCACTaGGACTACAGTGGTCACACATCCCCACAGCCTGCT | + |
Preference number: 3 (lower is better) Translates to: QPVIYHRLGNNH*DYSGHTSPQPA Trigger: AGCAGGCTGTGGGGATGTGTGACCACTGTAGTCTCAGTGGTTATTTCCAAGTCTATGATAGATGACTGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR TCA 72 bp | AAAACGGTCCATGTTCCCAAGTCTACTAGACACATTTaGCTGGTAGTGTGTATGCCCGCCCTGCACTACTAT | + |
Preference number: 3 (lower is better) Translates to: KTVHVPKSTRHI*LVVCMPALHYY Trigger: ATAGTAGTGCAGGGCGGGCATACACACTACCAGTCAAATGTGTCTAGTAGACTTGGGAACATGGACCGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR CCA 72 bp | CTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTaGTTTTTCACACTTCATCACCGAGTCTACCAGAGA | + |
Preference number: 3 (lower is better) Translates to: LLPVCIHELPAY*FFTLHHRVYQR Trigger: TCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR GCA 72 bp | AGAAGGCAGGTAGGTAAGGAACTACTTCTCCCTGTGTaGATTCATGAGCTACCAGCTTACTGGTTTTTCACA | + |
Preference number: 3 (lower is better) Translates to: RRQVGKELLLPV*IHELPAYWFFT Trigger: TGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTAGTTCCTTACCTACCTGCCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR TCA 72 bp | TTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTaGACAAAGATCAACCAGTCATCTATCATAGACTTG | + |
Preference number: 3 (lower is better) Translates to: FTLHHRVYQRRV*TKINQSSIIDL Trigger: CAAGTCTATGATAGATGACTGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR CAA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCTCATCTATCATAGACTaGGAAATAACCACTGAGACT | + |
Preference number: 3 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFSSIID*EITTET Trigger: AGTCTCAGTGGTTATTTCCAAGTCTATGATAGATGA...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR-3UTR CAA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTTCATCTATCATAGACTaGGAAATAACCACTGAGACT | + |
Preference number: 3 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLSSIID*EITTET Trigger: AGTCTCAGTGGTTATTTCCAAGTCTATGATAGATGA...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCATCTGCAGGGAGTACCTaGCTGCTGCTGGGGGCCTCT | + |
Preference number: 4 (lower is better) Translates to: VVCMPALHYYVNQDKAFPSAGST*LLLGAS Trigger: AGAGGCCCCCAGCAGCAGCCAGGTACTCCCTGCAGA...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACGGCATGGTAAGCAACTaGTTCAGCCGGGGCATCCCT | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHGMVSN*FSRGIP Trigger: AGGGATGCCCCGGCTGAATCAGTTGCTTACCATGCC...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCACAGAAGCAAGGGAGCTaGTTCGTGGTGGGAGTCCCA | + |
Preference number: 4 (lower is better) Translates to: VVCMPALHYYVNQDKAFPQKQGS*FVVGVP Trigger: TGGGACTCCCACCACGAATCAGCTCCCTTGCTTCTG...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCCAGGGAGTACCTGGCTaGTGCTGGGGGCCTCTGCTC | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFQGVPG*CWGPLL Trigger: GAGCAGAGGCCCCCAGCAGCAGCCAGGTACTCCCTG...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGGGAGTACCTGGCTaGTGCTGGGGGCCTCTGCTC | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYQGVPG*CWGPLL Trigger: GAGCAGAGGCCCCCAGCAGCAGCCAGGTACTCCCTG...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTTCTGCAGGGAGTACCTaGCTGCTGCTGGGGGCCTCT | + |
Preference number: 4 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSSAGST*LLLGAS Trigger: AGAGGCCCCCAGCAGCAGCCAGGTACTCCCTGCAGA...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAAGCCAGGCCTGGAGACTaGTTGAGCCGAGAAGGTGCG | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESEARPGD*LSREGA Trigger: CGCACCTTCTCGGCTCAATCAGTCTCCAGGCCTGGC...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCGCCAGGCCTGGAGACTaGTTGAGCCGAGAAGGTGCG | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFARPGD*LSREGA Trigger: CGCACCTTCTCGGCTCAATCAGTCTCCAGGCCTGGC...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACGTCATGCTGTCAAACTaGTCCCCGTCCTCACTGTCA | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHVMLSN*SPSSLS Trigger: TGACAGTGAGGACGGGGAGCAGTTTGACAGCATGAC...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACCCAGTTAAGCTGCCATaGATGGGATCAGCAACTCCG | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHPVKLP*MGSATP Trigger: CGGAGTTGCTGATCCCATGCATGGCAGCTTAACTGG...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACCATAGGACTTGGGCATaGAAAGGCATCGCTTGCAGT | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHHRTWA*KGIACS Trigger: ACTGCAAGCGATGCCTTTTCATGCCCAAGTCCTATG...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTGGCATGGTAAGCAACTaGTTCAGCCGGGGCATCCCT | + |
Preference number: 4 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSGMVSN*FSRGIP Trigger: AGGGATGCCCCGGCTGAATCAGTTGCTTACCATGCC...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACGAGACTGTTGAGGGATaGAAACTGGAGCATTGCCAC | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHETVEG*KLEHCH Trigger: GTGGCAATGCTCCAGTTTCCATCCCTCAACAGTCTC...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTGCCTGTGGCGGCTGGTaGAGGTTTAGAACTGGACTG | + |
Preference number: 4 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSACGGW*RFRTGL Trigger: CAGTCCAGTTCTAAACCTCCACCAGCCGCCACAGGC...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCACAGGGGCCAGGCCTaGAGACTGATTGAGCCGAGA | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYHRGQA*RLIEPR Trigger: TCTCGGCTCAATCAGTCTCCAGGCCTGGCCCCTGTG...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCATGTAGATGTGCTTCCTaGCGATCTCGTAGAGAGGGT | + |
Preference number: 4 (lower is better) Translates to: VVCMPALHYYVNQDKAFPCRCAS*RSRREG Trigger: ACCCTCTCTACGAGATCGTCAGGAAGCACATCTACA...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAAGGCCTGGAGACTGATTaGGCCGAGAAGGTGCGTTTG | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESEGLETD*AEKVRL Trigger: CAAACGCACCTTCTCGGCTCAATCAGTCTCCAGGCC...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAAGAGGGAGACTTCACTTaGCCTGGGGGTAGAGAGGTG | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESEEGDFT*PGGREV Trigger: CACCTCTCTACCCCCAGGCCAAGTGAAGTCTCCCTC...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATGGCACAGTGGTTGCTTaGAGGAGGGCCTGTGGCGGC | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNGTVVA*RRACGG Trigger: GCCGCCACAGGCCCTCCTCCAAGCAACCACTGTGCC...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTGGCACAGTGGTTGCTTaGAGGAGGGCCTGTGGCGGC | + |
Preference number: 4 (lower is better) Translates to: ESRYISYVAGLFCKIVQGGTVVA*RRACGG Trigger: GCCGCCACAGGCCCTCCTCCAAGCAACCACTGTGCC...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACCCCTCAGGTTGTATGTaGTCACCAGGAGATGAATGT | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHPSGCM*SPGDEC Trigger: ACATTCATCTCCTGGTGACCACATACAACCTGAGGG...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCAGGGAGACTGCACCATTaGGTGATTTTTCTCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: VVCMPALHYYVNQDKAFPGRLHH*VIFLLL Trigger: AAGCAGGAGAAAAATCACTCAATGGTGCAGTCTCCC...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR TCA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCCCACTCTCAGATGGTaGAGCACCATCTTTCCACTC | + |
Preference number: 4 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSPTLRW*STIFPL Trigger: GAGTGGAAAGATGGTGCTTCACCATCTGAGAGTGGG...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACGGTAAGTGCACTTCTTaGAGTAATACACGGCTTGCT | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHGKCTS*SNTRLA Trigger: AGCAAGCCGTGTATTACTGCAAGAAGTGCACTTACC...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR GCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACTGCTATGTAGGGTGCTaGCACGTGTTGAAAATGTTC | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHCYVGC*HVLKMF Trigger: GAACATTTTCAACACGTGGCAGCACCCTACATAGCA...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACAAGGGAGCTGATTCGTaGTGGGAGTCCCATGCCCTT | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYKGADS*WESHAL Trigger: AAGGGCATGGGACTCCCACCACGAATCAGCTCCCTT...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR CCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCAGGGGTAGAGAGGTGTTaGCAGTCTGCAGGGAGTACC | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPGVERC*QSAGST Trigger: GGTACTCCCTGCAGACTGCCAACACCTCTCTACCCC...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCAGAGGGAGACTTCACTTaGCCTGGGGGTAGAGAGGTG | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPEGDFT*PGGREV Trigger: CACCTCTCTACCCCCAGGCCAAGTGAAGTCTCCCTC...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR CCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTAGGGCCTGTGGCGGCTaGTGGAGGTTTAGAACTGGA | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLRACGG*WRFRTG Trigger: TCCAGTTCTAAACCTCCACCAGCCGCCACAGGCCCT...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACTCCTCCTCCTCTTTTTaGTCTAGCTTCTCAGATTCC | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHSSSSF*SSFSDS Trigger: GGAATCTGAGAAGCTAGACCAAAAAGAGGAGGAGGA...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACACTGTGACTGGTCCTTaGACCAAAACCCTTCAACTT | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHTVTGP*TKTLQL Trigger: AAGTTGAAGGGTTTTGGTCCAAGGACCAGTCACAGT...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCCAGAAGCAAGGGAGCTaGTTCGTGGTGGGAGTCCCA | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIQKQGS*FVVGVP Trigger: TGGGACTCCCACCACGAATCAGCTCCCTTGCTTCTG...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTGTTTACCATCTGCTGTaGTGGCAACGACCGGACATT | + |
Preference number: 4 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSVYHLL*WQRPDI Trigger: AATGTCCGGTCGTTGCCATCACAGCAGATGGTAAAC...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCATCTGGCCCACAGATTTaGCTCCATAGTTGTTTTGCT | + |
Preference number: 4 (lower is better) Translates to: VVCMPALHYYVNQDKAFPSGPQI*LHSCFA Trigger: AGCAAAACAACTATGGAGTCAAATCTGTGGGCCAGA...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACGAGTCTTTCTCATCGTaGTTTTCAAACAGCCACTCA | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHESFSS*FSNSHS Trigger: TGAGTGGCTGTTTGAAAATCACGATGAGAAAGACTC...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCCCACTCTCAGATGGTaGAGCACCATCTTTCCACTC | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYPTLRW*STIFPL Trigger: GAGTGGAAAGATGGTGCTTCACCATCTGAGAGTGGG...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACTTTTGCTATGTAGGGTaGTGCCACGTGTTGAAAATG | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHFCYVG*CHVLKM Trigger: CATTTTCAACACGTGGCAGCACCCTACATAGCAAAA...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACCTATCAGAGGCATCATaGATTAATTTGGCTGGTTCC | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHLSEAS*INLAGS Trigger: GGAACCAGCCAAATTAATGCATGATGCCTCTGATAG...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTTGGCAGCTGGCTTACTaGTCCTTGCATCTTCACTCT | + |
Preference number: 4 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSWQLAY*SLHLHS Trigger: AGAGTGAAGATGCAAGGAGCAGTAAGCCAGCTGCCA...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCATGCTACTTGGTGCGCTaGAGTTTGGAGCATGAAATA | + |
Preference number: 4 (lower is better) Translates to: VVCMPALHYYVNQDKAFPCYLVR*SLEHEI Trigger: TATTTCATGCTCCAAACTCCAGCGCACCAAGTAGCA...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTAAGGGAGCTGATTCGTaGTGGGAGTCCCATGCCCTT | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLKGADS*WESHAL Trigger: AAGGGCATGGGACTCCCACCACGAATCAGCTCCCTT...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCAGTAGTTAGCTACGGCTaGGACTTTCTCAGCTTTATG | + |
Preference number: 4 (lower is better) Translates to: VVCMPALHYYVNQDKAFPVVSYG*DFLSFM Trigger: CATAAAGCTGAGAAAGTCCCAGCCGTAGCTAACTAC...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCCAACACCCCTGCAGTaGACTAGATGCAGAGTGATG | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYPTPLQ*TRCRVM Trigger: CATCACTCTGCATCTAGTCCACTGCAGGGGTGTTGG...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATCACAGGGGCCAGGCCTaGAGACTGATTGAGCCGAGA | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNHRGQA*RLIEPR Trigger: TCTCGGCTCAATCAGTCTCCAGGCCTGGCCCCTGTG...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCATAGGACTTGGGCATaGAAAGGCATCGCTTGCAGT | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYHRTWA*KGIACS Trigger: ACTGCAAGCGATGCCTTTTCATGCCCAAGTCCTATG...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACACATCTGCTTTTTCCTaGACTTTTGGTTGTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHTSAFS*TFGCGF Trigger: AAAGCCACAACCAAAAGTTCAGGAAAAAGCAGATGT...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTATGCAGAGTGATGGTTaGGGCTGTCATGTTGCTAGT | + |
Preference number: 4 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSMQSDG*GCHVAS Trigger: ACTAGCAACATGACAGCCTCAACCATCACTCTGCAT...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACGGACTAGATGCAGAGTaGTGGTTGAGGCTGTCATGT | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYGLDAE*WLRLSC Trigger: ACATGACAGCCTCAACCATCACTCTGCATCTAGTCC...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTGGCCTGGAGACTGATTaGGCCGAGAAGGTGCGTTTG | + |
Preference number: 4 (lower is better) Translates to: ESRYISYVAGLFCKIVQGGLETD*AEKVRL Trigger: CAAACGCACCTTCTCGGCTCAATCAGTCTCCAGGCC...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCAATTATCCTCAAAGTCTaGGATTTGTTGGGAACCAGG | + |
Preference number: 4 (lower is better) Translates to: VVCMPALHYYVNQDKAFPIILKV*DLLGTR Trigger: CCTGGTTCCCAACAAATCTCAGACTTTGAGGATAAT...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCGAGGCTGCTACTTGGTaGGCTGGAGTTTGGAGCATG | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIEAATW*AGVWSM Trigger: CATGCTCCAAACTCCAGCGCACCAAGTAGCAGCCTC...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCAGAATGTTGGTGTGACTaGCCTGTTGCAATGTCAAAT | + |
Preference number: 4 (lower is better) Translates to: VVCMPALHYYVNQDKAFPECWCD*PVAMSN Trigger: ATTTGACATTGCAACAGGGCAGTCACACCAACATTC...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACTGGCAGCTGGCTTACTaGTCCTTGCATCTTCACTCT | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYWQLAY*SLHLHS Trigger: AGAGTGAAGATGCAAGGAGCAGTAAGCCAGCTGCCA...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCAAGGCATCGCTTGCAGTaGATGTTACACTCCTCTCGG | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPRHRLQ*MLHSSR Trigger: CCGAGAGGAGTGTAACATCCACTGCAAGCGATGCCT...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACTCAGCATCAAGGGCTTaGCTCGGGGAACTACAACAT | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYSASRA*LGELQH Trigger: ATGTTGTAGTTCCCCGAGCCAAGCCCTTGATGCTGA...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCAGGAGCTGATTCGTGGTaGGAGTCCCATGCCCTTTTT | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPGADSW*ESHALF Trigger: AAAAAGGGCATGGGACTCCCACCACGAATCAGCTCC...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATGGGGTAGAGAGGTGTTaGCAGTCTGCAGGGAGTACC | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNGVERC*QSAGST Trigger: GGTACTCCCTGCAGACTGCCAACACCTCTCTACCCC...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATAGGGCCTGTGGCGGCTaGTGGAGGTTTAGAACTGGA | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNRACGG*WRFRTG Trigger: TCCAGTTCTAAACCTCCACCAGCCGCCACAGGCCCT...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACTTGTCCTGGCCATTCTaGGTTTTTCCAACACCCCTG | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYLSWPF*VFPTPL Trigger: CAGGGGTGTTGGAAAAACCCAGAATGGCCAGGACAA...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACTCCATAGCCATAGACTaGCAGCTAACTTCTCAATTT | + |
Preference number: 4 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHSIAID*QLTSQF Trigger: AAATTGAGAAGTTAGCTGCCAGTCTATGGCTATGGA...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTTGCATCTTCACTCTaGGAAGACTCATCAGACCAG | + |
Preference number: 4 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSLASSL*EDSSDQ Trigger: CTGGTCTGATGAGTCTTCCCAGAGTGAAGATGCAAG...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACTTAAGCTGCCATGCATaGGATCAGCAACTCCGTCAG | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYLSCHA*DQQLRQ Trigger: CTGACGGAGTTGCTGATCCCATGCATGGCAGCTTAA...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAAATGCCCTTTTTGTCTTaGGGTTTGGGAGCTATCAGC | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESEMPFLS*GLGAIS Trigger: GCTGATAGCTCCCAAACCTCAAGACAAAAAGGGCAT...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTGTTTACCATCTGCTGTaGTGGCAACGACCGGACATT | + |
Preference number: 4 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFVYHLL*WQRPDI Trigger: AATGTCCGGTCGTTGCCATCACAGCAGATGGTAAAC...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAAATGCAGAGTGATGGTTaGGGCTGTCATGTTGCTAGT | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESEMQSDG*GCHVAS Trigger: ACTAGCAACATGACAGCCTCAACCATCACTCTGCAT...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR TCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAATGCATTTTCCCACTGTaGCTGGTCCTTGGACCAAAA | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESECIFPL*LVLGPK Trigger: TTTTGGTCCAAGGACCAGTCACAGTGGGAAAATGCA...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGGAGGCTGCTACTTGGTaGGCTGGAGTTTGGAGCATG | + |
Preference number: 4 (lower is better) Translates to: RVQIYILCCWPLLQDCTREAATW*AGVWSM Trigger: CATGCTCCAAACTCCAGCGCACCAAGTAGCAGCCTC...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTGTGGTGGGAGTCCCATaGCCTTTTTGTCTTGAGGTT | + |
Preference number: 4 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFVVGVP*PFCLEV Trigger: AACCTCAAGACAAAAAGGGCATGGGACTCCCACCAC...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCACTGCAGTGGACTAGATaGAGAGTGATGGTTGAGGCT | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPLQWTR*RVMVEA Trigger: AGCCTCAACCATCACTCTGCATCTAGTCCACTGCAG...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCTTTTTCCAACACCCCTaGAGTGGACTAGATGCAGAG | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFFFQHP*SGLDAE Trigger: CTCTGCATCTAGTCCACTGCAGGGGTGTTGGAAAAA...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCAGAGACTGTTGAGGGATaGAAACTGGAGCATTGCCAC | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPETVEG*KLEHCH Trigger: GTGGCAATGCTCCAGTTTCCATCCCTCAACAGTCTC...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCACCAGGAGATGAATGTTaGTGTGACTGCCCTGTTGCA | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPPGDEC*CDCPVA Trigger: TGCAACAGGGCAGTCACACCAACATTCATCTCCTGG...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTTTGTCCTGGCCATTCTaGGTTTTTCCAACACCCCTG | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLLSWPF*VFPTPL Trigger: CAGGGGTGTTGGAAAAACCCAGAATGGCCAGGACAA...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCAAGTCTGAGATTTGTTaGGAACCAGGCCCACTCTCA | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFKSEIC*EPGPLS Trigger: TGAGAGTGGGCCTGGTTCCCAACAAATCTCAGACTT...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTTTAAGCTGCCATGCATaGGATCAGCAACTCCGTCAG | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLLSCHA*DQQLRQ Trigger: CTGACGGAGTTGCTGATCCCATGCATGGCAGCTTAA...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCTGTAGATGTGCTTCCTaGCGATCTCGTAGAGAGGGT | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFICRCAS*RSRREG Trigger: ACCCTCTCTACGAGATCGTCAGGAAGCACATCTACA...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTGGGAGACTGCACCATTaGGTGATTTTTCTCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLGRLHH*VIFLLL Trigger: AAGCAGGAGAAAAATCACTCAATGGTGCAGTCTCCC...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCGTTCATGGTCCTCAATaGCATGCTGTACCAAAGCTT | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFVHGPQ*HAVPKL Trigger: AAGCTTTGGTACAGCATGTCATTGAGGACCATGAAC...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACTCTTCTCTACATCATTaGAGGTGGAACGGCAATACG | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYSSLHH*RWNGNT Trigger: CGTATTGCCGTTCCACCTTCAATGATGTAGAGAAGA...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCCACTGCAGCTTGAGGTaGACTTTTAACCGGGACATC | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIHCSLR*TFNRDI Trigger: GATGTCCCGGTTAAAAGTTCACCTCAAGCTGCAGTG...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCGGACTAGATGCAGAGTaGTGGTTGAGGCTGTCATGT | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIGLDAE*WLRLSC Trigger: ACATGACAGCCTCAACCATCACTCTGCATCTAGTCC...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAATCTTCCTCTTGTTACTaGAATGGGAGGCAATGTCAC | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESESSSCY*NGRQCH Trigger: GTGACATTGCCTCCCATTTCAGTAACAAGAGGAAGA...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACGGTAAGTGCACTTCTTaGAGTAATACACGGCTTGCT | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYGKCTS*SNTRLA Trigger: AGCAAGCCGTGTATTACTGCAAGAAGTGCACTTACC...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCGAGGGTCTCGGTAAGTaGACTTCTTGCAGTAATACA | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFEGLGK*TSCSNT Trigger: TGTATTACTGCAAGAAGTGCACTTACCGAGACCCTC...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACGAGGGTCTCGGTAAGTaGACTTCTTGCAGTAATACA | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYEGLGK*TSCSNT Trigger: TGTATTACTGCAAGAAGTGCACTTACCGAGACCCTC...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAATGCTATGTAGGGTGCTaGCACGTGTTGAAAATGTTC | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESECYVGC*HVLKMF Trigger: GAACATTTTCAACACGTGGCAGCACCCTACATAGCA...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTGTCATGCTGTCAAACTaGTCCCCGTCCTCACTGTCA | + |
Preference number: 4 (lower is better) Translates to: ESRYISYVAGLFCKIVQGVMLSN*SPSSLS Trigger: TGACAGTGAGGACGGGGAGCAGTTTGACAGCATGAC...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATCCAGTTAAGCTGCCATaGATGGGATCAGCAACTCCG | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNPVKLP*MGSATP Trigger: CGGAGTTGCTGATCCCATGCATGGCAGCTTAACTGG...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCTGCTACTTGGTGCGCTaGAGTTTGGAGCATGAAATA | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFCYLVR*SLEHEI Trigger: TATTTCATGCTCCAAACTCCAGCGCACCAAGTAGCA...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATGGAGCTGATTCGTGGTaGGAGTCCCATGCCCTTTTT | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNGADSW*ESHALF Trigger: AAAAAGGGCATGGGACTCCCACCACGAATCAGCTCC...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCCCAGGAGATGAATGTTaGTGTGACTGCCCTGTTGCA | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIPGDEC*CDCPVA Trigger: TGCAACAGGGCAGTCACACCAACATTCATCTCCTGG...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTTGGCTTTGGAGGAACTaGGGCATTATTTTGGGCATG | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLWLWRN*GIILGM Trigger: CATGCCCAAAATAATGCCCCAGTTCCTCCAAAGCCA...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCATGGCTTTGGAGGAACTaGGGCATTATTTTGGGCATG | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPWLWRN*GIILGM Trigger: CATGCCCAAAATAATGCCCCAGTTCCTCCAAAGCCA...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCTCCTCCTCCTCTTTTTaGTCTAGCTTCTCAGATTCC | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFSSSSF*SSFSDS Trigger: GGAATCTGAGAAGCTAGACCAAAAAGAGGAGGAGGA...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTAAGTCTGAGATTTGTTaGGAACCAGGCCCACTCTCA | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLKSEIC*EPGPLS Trigger: TGAGAGTGGGCCTGGTTCCCAACAAATCTCAGACTT...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCATTTTCCCACTGTGACTaGTCCTTGGACCAAAACCCT | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPFSHCD*SLDQNP Trigger: AGGGTTTTGGTCCAAGGACCAGTCACAGTGGGAAAA...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTTTTTCCCACTGTGACTaGTCCTTGGACCAAAACCCT | + |
Preference number: 4 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFFSHCD*SLDQNP Trigger: AGGGTTTTGGTCCAAGGACCAGTCACAGTGGGAAAA...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCATCTTCCTCTTGTTACTaGAATGGGAGGCAATGTCAC | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPSSSCY*NGRQCH Trigger: GTGACATTGCCTCCCATTTCAGTAACAAGAGGAAGA...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCATCTACATTGTCAGCCTaGTTAGGTTTAAGGCCATCG | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPSTLSA*LGLRPS Trigger: CGATGGCCTTAAACCTAAGCAGGCTGACAATGTAGA...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACTTTTGCTATGTAGGGTaGTGCCACGTGTTGAAAATG | + |
Preference number: 4 (lower is better) Translates to: CIHELPAYWFFTLHHRVYFCYVG*CHVLKM Trigger: CATTTTCAACACGTGGCAGCACCCTACATAGCAAAA...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATGTGGTGGGAGTCCCATaGCCTTTTTGTCTTGAGGTT | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNVVGVP*PFCLEV Trigger: AACCTCAAGACAAAAAGGGCATGGGACTCCCACCAC...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGCTGCAGTGGACTAGATaGAGAGTGATGGTTGAGGCT | + |
Preference number: 4 (lower is better) Translates to: RVQIYILCCWPLLQDCTRLQWTR*RVMVEA Trigger: AGCCTCAACCATCACTCTGCATCTAGTCCACTGCAG...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAATTTTGTCTTGAGGTTTaGGAGCTATCAGCATCAAGG | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESEFCLEV*ELSASR Trigger: CCTTGATGCTGATAGCTCCCAAACCTCAAGACAAAA...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGCCAACACCCCTGCAGTaGACTAGATGCAGAGTGATG | + |
Preference number: 4 (lower is better) Translates to: PDIYLMLLASFARLYKVMPTPLQ*TRCRVM Trigger: CATCACTCTGCATCTAGTCCACTGCAGGGGTGTTGG...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCATCTCAATTTCTCTCCTaGTGGGATAGGGCTGTTTGT | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPSQFLS*WDRAVC Trigger: ACAAACAGCCCTATCCCACCAGGAGAGAAATTGAGA...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCGACTCCCGCTTCCATTaGATTCTTCTTCCAAATGTT | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFDSRFH*ILLPNV Trigger: AACATTTGGAAGAAGAATCCAATGGAAGCGGGAGTC...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCCTTGCATCTTCACTCTaGGAAGACTCATCAGACCAG | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFILASSL*EDSSDQ Trigger: CTGGTCTGATGAGTCTTCCCAGAGTGAAGATGCAAG...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCTCTTTTTATCTGCATTaGAGGTACAGTAAGGGCAGT | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFSFYLH*RYSKGS Trigger: ACTGCCCTTACTGTACCTTCAATGCAGATAAAAAGA...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATATGCCCTTTTTGTCTTaGGGTTTGGGAGCTATCAGC | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNMPFLS*GLGAIS Trigger: GCTGATAGCTCCCAAACCTCAAGACAAAAAGGGCAT...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCCATTGGACATCATGTTaGCTCCCGTTGAATTTAAGT | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFHWTSC*LPLNLS Trigger: ACTTAAATTCAACGGGAGTCAACATGATGTCCAATG...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR TCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAAGGACAAGACAGACCATaGATTAACATATGGTTGAGT | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESEGQDRP*INIWLS Trigger: ACTCAACCATATGTTAATTCATGGTCTGTCTTGTCC...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR TCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCTCTTCTCTACATCATTaGAGGTGGAACGGCAATACG | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFISSLHH*RWNGNT Trigger: CGTATTGCCGTTCCACCTTCAATGATGTAGAGAAGA...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR TCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCTGTCTTTCTCGTAAATaGTGTGCAAGTGCATCAGAT | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFCLSRK*CASASD Trigger: ATCTGATGCACTTGCACATCATTTACGAGAAAGACA...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTGAGTCTTTCTCATCGTaGTTTTCAAACAGCCACTCA | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLESFSS*FSNSHS Trigger: TGAGTGGCTGTTTGAAAATCACGATGAGAAAGACTC...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR TCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTGCTAGCATTGACTCTTaGGTCTTTCTCATCGTGATT | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLASIDS*VFLIVI Trigger: AATCACGATGAGAAAGACTCAAGAGTCAATGCTAGC...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTATTATCCTCAAAGTCTaGGATTTGTTGGGAACCAGG | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLIILKV*DLLGTR Trigger: CCTGGTTCCCAACAAATCTCAGACTTTGAGGATAAT...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR TCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATTGCATTTTCCCACTGTaGCTGGTCCTTGGACCAAAA | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNCIFPL*LVLGPK Trigger: TTTTGGTCCAAGGACCAGTCACAGTGGGAAAATGCA...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTCATTCGCATGTGTGCTaGCATCTTCTCTACATCATT | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLHSHVC*HLLYII Trigger: AATGATGTAGAGAAGATGGCAGCACACATGCGAATG...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS-3UTR GCA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAATCAATTGTGCTATTCTaGCACTCAATCTGTGGGTTT | + |
Preference number: 4 (lower is better) Translates to: QLTGFSHFITESTREESESIVLF*HSICGF Trigger: AAACCCACAGATTGAGTGGCAGAATAGCACAATTGA...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGTCAGCATCAAGGGCTTaGCTCGGGGAACTACAACAT | + |
Preference number: 4 (lower is better) Translates to: PDIYLMLLASFARLYKVMSASRA*LGELQH Trigger: ATGTTGTAGTTCCCCGAGCCAAGCCCTTGATGCTGA...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCACTCTTGTTACTGAAATaGGAGGCAATGTCACTCTTC | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPLLLLK*EAMSLF Trigger: GAAGAGTGACATTGCCTCCCATTTCAGTAACAAGAG...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTGACTCCCGCTTCCATTaGATTCTTCTTCCAAATGTT | + |
Preference number: 4 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFDSRFH*ILLPNV Trigger: AACATTTGGAAGAAGAATCCAATGGAAGCGGGAGTC...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATGACTGCACCATTGAGTaGTTTTTCTCCTGCTTTTGC | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNDCTIE*FFSCFC Trigger: GCAAAAGCAGGAGAAAAATCACTCAATGGTGCAGTC...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTGTTCATGGTCCTCAATaGCATGCTGTACCAAAGCTT | + |
Preference number: 4 (lower is better) Translates to: ESRYISYVAGLFCKIVQGVHGPQ*HAVPKL Trigger: AAGCTTTGGTACAGCATGTCATTGAGGACCATGAAC...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCTCTTCATCAATATaGACCATTCGCATGTGTGCT | + |
Preference number: 4 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFISSSI*TIRMCA Trigger: AGCACACATGCGAATGGTTCATATTGATGAAGAGAT...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCGCTAGCATTGACTCTTaGGTCTTTCTCATCGTGATT | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIASIDS*VFLIVI Trigger: AATCACGATGAGAAAGACTCAAGAGTCAATGCTAGC...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTTTTCTCCTGCTTTTaGTATGTAGGGTGCTGCCAC | + |
Preference number: 4 (lower is better) Translates to: RVQIYILCCWPLLQDCTRFFSCF*YVGCCH Trigger: GTGGCAGCACCCTACATAGCAAAAGCAGGAGAAAAA...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCCATTCGCATGTGTGCTaGCATCTTCTCTACATCATT | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIHSHVC*HLLYII Trigger: AATGATGTAGAGAAGATGGCAGCACACATGCGAATG...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTAACCATTCGCATGTGTaGTGCCATCTTCTCTACATC | + |
Preference number: 4 (lower is better) Translates to: ESRYISYVAGLFCKIVQGNHSHV*CHLLYI Trigger: GATGTAGAGAAGATGGCAGCACACATGCGAATGGTT...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATAACCATTCGCATGTGTaGTGCCATCTTCTCTACATC | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNNHSHV*CHLLYI Trigger: GATGTAGAGAAGATGGCAGCACACATGCGAATGGTT...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGTTTTTCCAACACCCCTaGAGTGGACTAGATGCAGAG | + |
Preference number: 4 (lower is better) Translates to: PDIYLMLLASFARLYKVMFFQHP*SGLDAE Trigger: CTCTGCATCTAGTCCACTGCAGGGGTGTTGGAAAAA...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCTCTTTCCCAAGGTTATaGTTTTTGTCAACAGTCTTG | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFSFPRL*FLSTVL Trigger: CAAGACTGTTGACAAAAAGCATAACCTTGGGAAAGA...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCCTATCAGAGGCATCATaGATTAATTTGGCTGGTTCC | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFILSEAS*INLAGS Trigger: GGAACCAGCCAAATTAATGCATGATGCCTCTGATAG...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGTGGCTTACTGCTCCTTaGATCTTCACTCTGGGAAGA | + |
Preference number: 4 (lower is better) Translates to: PDIYLMLLASFARLYKVMWLTAP*IFTLGR Trigger: TCTTCCCAGAGTGAAGATGCAAGGAGCAGTAAGCCA...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCTTCTTCCATTTTAACTaGTCTGTGTCATCTTGCACT | + |
Preference number: 4 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFFFHFN*SVSSCT Trigger: AGTGCAAGATGACACAGAGCAGTTAAAATGGAAGAA...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCATCAATTGTGCTATTCTaGCACTCAATCTGTGGGTTT | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPSIVLF*HSICGF Trigger: AAACCCACAGATTGAGTGGCAGAATAGCACAATTGA...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCTTTTGTCTTGAGGTTTaGGAGCTATCAGCATCAAGG | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIFCLEV*ELSASR Trigger: CCTTGATGCTGATAGCTCCCAAACCTCAAGACAAAA...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGCCCTCAGGTTGTATGTaGTCACCAGGAGATGAATGT | + |
Preference number: 4 (lower is better) Translates to: PDIYLMLLASFARLYKVMPSGCM*SPGDEC Trigger: ACATTCATCTCCTGGTGACCACATACAACCTGAGGG...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATTCTCAATTTCTCTCCTaGTGGGATAGGGCTGTTTGT | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNSQFLS*WDRAVC Trigger: ACAAACAGCCCTATCCCACCAGGAGAGAAATTGAGA...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCCTCTTGTTACTGAAATaGGAGGCAATGTCACTCTTC | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFILLLLK*EAMSLF Trigger: GAAGAGTGACATTGCCTCCCATTTCAGTAACAAGAG...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGTCTGGCCCACAGATTTaGCTCCATAGTTGTTTTGCT | + |
Preference number: 4 (lower is better) Translates to: PDIYLMLLASFARLYKVMSGPQI*LHSCFA Trigger: AGCAAAACAACTATGGAGTCAAATCTGTGGGCCAGA...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCGGACAAGACAGACCATaGATTAACATATGGTTGAGT | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIGQDRP*INIWLS Trigger: ACTCAACCATATGTTAATTCATGGTCTGTCTTGTCC...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGTTTTTCTCCTGCTTTTaGTATGTAGGGTGCTGCCAC | + |
Preference number: 4 (lower is better) Translates to: PDIYLMLLASFARLYKVMFFSCF*YVGCCH Trigger: GTGGCAGCACCCTACATAGCAAAAGCAGGAGAAAAA...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGGAATGTTGGTGTGACTaGCCTGTTGCAATGTCAAAT | + |
Preference number: 4 (lower is better) Translates to: RVQIYILCCWPLLQDCTRECWCD*PVAMSN Trigger: ATTTGACATTGCAACAGGGCAGTCACACCAACATTC...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCATCTTTCCCAAGGTTATaGTTTTTGTCAACAGTCTTG | + |
Preference number: 4 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPSFPRL*FLSTVL Trigger: CAAGACTGTTGACAAAAAGCATAACCTTGGGAAAGA...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTCCGTTGAATTTAAGTTaGGCTTTGGTATTGACAATC | + |
Preference number: 4 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLPLNLS*ALVLTI Trigger: GATTGTCAATACCAAAGCCCAACTTAAATTCAACGG...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGGTAGTTAGCTACGGCTaGGACTTTCTCAGCTTTATG | + |
Preference number: 4 (lower is better) Translates to: PDIYLMLLASFARLYKVMVVSYG*DFLSFM Trigger: CATAAAGCTGAGAAAGTCCCAGCCGTAGCTAACTAC...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATTCTTTTTATCTGCATTaGAGGTACAGTAAGGGCAGT | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNSFYLH*RYSKGS Trigger: ACTGCCCTTACTGTACCTTCAATGCAGATAAAAAGA...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGCATTGGACATCATGTTaGCTCCCGTTGAATTTAAGT | + |
Preference number: 4 (lower is better) Translates to: RVQIYILCCWPLLQDCTRHWTSC*LPLNLS Trigger: ACTTAAATTCAACGGGAGTCAACATGATGTCCAATG...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATTGTCTTTCTCGTAAATaGTGTGCAAGTGCATCAGAT | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNCLSRK*CASASD Trigger: ATCTGATGCACTTGCACATCATTTACGAGAAAGACA...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR GCA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCTTCTTCCATTTTAACTaGTCTGTGTCATCTTGCACT | + |
Preference number: 4 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIFFHFN*SVSSCT Trigger: AGTGCAAGATGACACAGAGCAGTTAAAATGGAAGAA...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTCCATAGCCATAGACTaGCAGCTAACTTCTCAATTT | + |
Preference number: 4 (lower is better) Translates to: RVQIYILCCWPLLQDCTRSIAID*QLTSQF Trigger: AAATTGAGAAGTTAGCTGCCAGTCTATGGCTATGGA...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATTCAACTACATCATCTTaGTCTACCTCACTATCAGAG | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNSTTSS*STSLSE Trigger: CTCTGATAGTGAGGTAGACCAAGATGATGTAGTTGA...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTCAACTACATCATCTTaGTCTACCTCACTATCAGAG | + |
Preference number: 4 (lower is better) Translates to: RVQIYILCCWPLLQDCTRSTTSS*STSLSE Trigger: CTCTGATAGTGAGGTAGACCAAGATGATGTAGTTGA...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR TCA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGATCTCTTCATCAATATaGACCATTCGCATGTGTGCT | + |
Preference number: 4 (lower is better) Translates to: PDIYLMLLASFARLYKVMISSSI*TIRMCA Trigger: AGCACACATGCGAATGGTTCATATTGATGAAGAGAT...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATTGGTGCGCTGGAGTTTaGAGCATGAAATATTTTAAT | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNWCAGV*SMKYFN Trigger: ATTAAAATATTTCATGCTCCAAACTCCAGCGCACCA...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTGGTGCGCTGGAGTTTaGAGCATGAAATATTTTAAT | + |
Preference number: 4 (lower is better) Translates to: ESRYISYVAGLFCKIVQGWCAGV*SMKYFN Trigger: ATTAAAATATTTCATGCTCCAAACTCCAGCGCACCA...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATCCGTTGAATTTAAGTTaGGCTTTGGTATTGACAATC | + |
Preference number: 4 (lower is better) Translates to: TVLVALIQHSYRSKRCQNPLNLS*ALVLTI Trigger: GATTGTCAATACCAAAGCCCAACTTAAATTCAACGG...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CCA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGCAAGTGCATCAGATATaGGTCCTTTTAGTATTGAAA | + |
Preference number: 4 (lower is better) Translates to: RVQIYILCCWPLLQDCTRQVHQI*VLLVLK Trigger: TTTCAATACTAAAAGGACCCATATCTGATGCACTTG...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR CAA 72 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTaGCAAGATTGTACAAGGTTATGTGCAAAAACTAAG | + |
Preference number: 4 (lower is better) Translates to: RVQIYILCCWPL*QDCTRLCAKTK Trigger: CTTAGTTTTTGCACATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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3UTR CAA 72 bp | TCTATAATACAGGAGAGTCCAGATATATATCTTATGTaGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATG | + |
Preference number: 4 (lower is better) Translates to: SIIQESPDIYLM*LASFARLYKVM Trigger: CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCTCCTGTATTATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 90 bp | GAGGGAGACTTCACTTGGCCTGGGGGTAGAGAGGTGTTGGCAGTCTaGAGGGAGTACCTGGCTGCTGCTGGGGGCCTCTGCTCAGCACCT | + |
Preference number: 5 (lower is better) Translates to: EGDFTWPGGREVLAV*REYLAAAGGLCSAP Trigger: AGGTGCTGAGCAGAGGCCCCCAGCAGCAGCCAGGTACTCCCTGCAGACTGCCAACACCTCTCTACCCCCAGGCCAAGTGAAGTCTCCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 90 bp | GAGACACAGAGGGAGACTTCACTTGGCCTGGGGGTAGAGAGGTGTTaGCAGTCTGCAGGGAGTACCTGGCTGCTGCTGGGGGCCTCTGCT | + |
Preference number: 5 (lower is better) Translates to: ETQRETSLGLGVERC*QSAGSTWLLLGASA Trigger: AGCAGAGGCCCCCAGCAGCAGCCAGGTACTCCCTGCAGACTGCCAACACCTCTCTACCCCCAGGCCAAGTGAAGTCTCCCTCTGTGTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 90 bp | GTGTTGGCAGTCTGCAGGGAGTACCTGGCTGCTGCTGGGGGCCTCTaGTCAGCACCTAGCCCAAAAGACCTCCCATTCCCACTTGGAAGT | + |
Preference number: 5 (lower is better) Translates to: VLAVCREYLAAAGGL*SAPSPKDLPFPLGS Trigger: ACTTCCAAGTGGGAATGGGAGGTCTTTTGGGCTAGGTGCTGAGCAGAGGCCCCCAGCAGCAGCCAGGTACTCCCTGCAGACTGCCAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | TCCATCTGCTCATACGTGCGCTTCACAGGGGCCAGGCCTGGAGACTaGTTGAGCCGAGAAGGTGCGTTTGTCTTGTCCTGGCCATTCTGG | + |
Preference number: 5 (lower is better) Translates to: SICSYVRFTGARPGD*LSREGAFVLSWPFW Trigger: CCAGAATGGCCAGGACAAGACAAACGCACCTTCTCGGCTCAATCAGTCTCCAGGCCTGGCCCCTGTGAAGCGCACGTATGAGCAGATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 90 bp | TGGAAACTCCATCTGCTCATACGTGCGCTTCACAGGGGCCAGGCCTaGAGACTGATTGAGCCGAGAAGGTGCGTTTGTCTTGTCCTGGCC | + |
Preference number: 5 (lower is better) Translates to: WKLHLLIRALHRGQA*RLIEPRRCVCLVLA Trigger: GGCCAGGACAAGACAAACGCACCTTCTCGGCTCAATCAGTCTCCAGGCCTGGCCCCTGTGAAGCGCACGTATGAGCAGATGGAGTTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | TCTGCTCATACGTGCGCTTCACAGGGGCCAGGCCTGGAGACTGATTaGGCCGAGAAGGTGCGTTTGTCTTGTCCTGGCCATTCTGGGTTT | + |
Preference number: 5 (lower is better) Translates to: SAHTCASQGPGLETD*AEKVRLSCPGHSGF Trigger: AAACCCAGAATGGCCAGGACAAGACAAACGCACCTTCTCGGCTCAATCAGTCTCCAGGCCTGGCCCCTGTGAAGCGCACGTATGAGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | GCAAGGGAGCTGATTCGTGGTGGGAGTCCCATGCCCTTTTTGTCTTaGGGTTTGGGAGCTATCAGCATCAAGGGCTTGGCTCGGGGAACT | + |
Preference number: 5 (lower is better) Translates to: ARELIRGGSPMPFLS*GLGAISIKGLARGT Trigger: AGTTCCCCGAGCCAAGCCCTTGATGCTGATAGCTCCCAAACCTCAAGACAAAAAGGGCATGGGACTCCCACCACGAATCAGCTCCCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 90 bp | AGGCTTGCTGGCTGCTCAGCTTCACTCCAGTTAAGCTGCCATGCATaGGATCAGCAACTCCGTCAGTCATGCTGTCAAACTGCTCCCCGT | + |
Preference number: 5 (lower is better) Translates to: RLAGCSASLQLSCHA*DQQLRQSCCQTAPR Trigger: ACGGGGAGCAGTTTGACAGCATGACTGACGGAGTTGCTGATCCCATGCATGGCAGCTTAACTGGAGTGAAGCTGAGCAGCCAGCAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACGGGGGTAGAGAGGTGTaGGCAGTCTGCAGGGAGTAC | + |
Preference number: 5 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHGGREV*AVCREY Trigger: GTACTCCCTGCAGACTGCCAACACCTCTCTACCCCC...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | TCTGCTGTGATGGCAACGACCGGACATTTCCAGAAGCAAGGGAGCTaGTTCGTGGTGGGAGTCCCATGCCCTTTTTGTCTTGAGGTTTGG | + |
Preference number: 5 (lower is better) Translates to: SAVMATTGHFQKQGS*FVVGVPCPFCLEVW Trigger: CCAAACCTCAAGACAAAAAGGGCATGGGACTCCCACCACGAATCAGCTCCCTTGCTTCTGGAAATGTCCGGTCGTTGCCATCACAGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 90 bp | ACTGTTTCACGGACTGAGACTGTTGAGGGATGGAAACTGGAGCATTaGCACCTAGTCCCAGCCTCACTGACTGGCCAACACCATAGCTCT | + |
Preference number: 5 (lower is better) Translates to: TVSRTETVEGWKLEH*HLVPASLTGQHHSS Trigger: AGAGCTATGGTGTTGGCCAGTCAGTGAGGCTGGGACTAGGTGGCAATGCTCCAGTTTCCATCCCTCAACAGTCTCAGTCCGTGAAACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 90 bp | TGGCAACGACCGGACATTTCCAGAAGCAAGGGAGCTGATTCGTGGTaGGAGTCCCATGCCCTTTTTGTCTTGAGGTTTGGGAGCTATCAG | + |
Preference number: 5 (lower is better) Translates to: WQRPDISRSKGADSW*ESHALFVLRFGSYQ Trigger: CTGATAGCTCCCAAACCTCAAGACAAAAAGGGCATGGGACTCCCACCACGAATCAGCTCCCTTGCTTCTGGAAATGTCCGGTCGTTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 90 bp | ACAGATTGTACAGATTTTCCACTTCTGAGTGGCACAGTGGTTGCTTaGAGGAGGGCCTGTGGCGGCTGGTGGAGGTTTAGAACTGGACTG | + |
Preference number: 5 (lower is better) Translates to: TDCTDFPLLSGTVVA*RRACGGWWRFRTGL Trigger: CAGTCCAGTTCTAAACCTCCACCAGCCGCCACAGGCCCTCCTCCAAGCAACCACTGTGCCACTCAGAAGTGGAAAATCTGTACAATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCAGGGGCATCCCTCAGGTaGTATGTGGTCACCAGGAGA | + |
Preference number: 5 (lower is better) Translates to: VVCMPALHYYVNQDKAFPGASLR*YVVTRR Trigger: TCTCCTGGTGACCACATACAACCTGAGGGATGCCCC...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | ACACTCCTCTCGGGCATTTGTGCCCAGGGAGACTGCACCATTGAGTaGTTTTTCTCCTGCTTTTGCTATGTAGGGTGCTGCCACGTGTTG | + |
Preference number: 5 (lower is better) Translates to: TLLSGICAQGDCTIE*FFSCFCYVGCCHVL Trigger: CAACACGTGGCAGCACCCTACATAGCAAAAGCAGGAGAAAAATCACTCAATGGTGCAGTCTCCCTGGGCACAAATGCCCGAGAGGAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | TTCTCAGGGAAAAGCTCGTTACAGATTGTACAGATTTTCCACTTCTaGGTGGCACAGTGGTTGCTTGGAGGAGGGCCTGTGGCGGCTGGT | + |
Preference number: 5 (lower is better) Translates to: FSGKSSLQIVQIFHF*VAQWLLGGGPVAAG Trigger: ACCAGCCGCCACAGGCCCTCCTCCAAGCAACCACTGTGCCACTCAGAAGTGGAAAATCTGTACAATCTGTAACGAGCTTTTCCCTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 90 bp | CATGGTAAGCAACTGATTCAGCCGGGGCATCCCTCAGGTTGTATGTaGTCACCAGGAGATGAATGTTGGTGTGACTGCCCTGTTGCAATG | + |
Preference number: 5 (lower is better) Translates to: HGKQLIQPGHPSGCM*SPGDECWCDCPVAM Trigger: CATTGCAACAGGGCAGTCACACCAACATTCATCTCCTGGTGACCACATACAACCTGAGGGATGCCCCGGCTGAATCAGTTGCTTACCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACATCAGCATCAAGGGCTaGGCTCGGGGAACTACAACA | + |
Preference number: 5 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHISIKG*ARGTTT Trigger: TGTTGTAGTTCCCCGAGCCAAGCCCTTGATGCTGAT...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCAAGCAGCACACCAGGCTaGTACTTTTCACAGTCGCGG | + |
Preference number: 5 (lower is better) Translates to: VVCMPALHYYVNQDKAFPSSTPG*YFSQSR Trigger: CCGCGACTGTGAAAAGTACAAGCCTGGTGTGCTGCT...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | AGGGTGCTGCCACGTGTTGAAAATGTTCCCTGTAGATGTGCTTCCTaGCGATCTCGTAGAGAGGGTCTCGGTAAGTGCACTTCTTGCAGT | + |
Preference number: 5 (lower is better) Translates to: RVLPRVENVPCRCAS*RSRREGLGKCTSCS Trigger: ACTGCAAGAAGTGCACTTACCGAGACCCTCTCTACGAGATCGTCAGGAAGCACATCTACAGGGAACATTTTCAACACGTGGCAGCACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | TGTTACACTCCTCTCGGGCATTTGTGCCCAGGGAGACTGCACCATTaGGTGATTTTTCTCCTGCTTTTGCTATGTAGGGTGCTGCCACGT | + |
Preference number: 5 (lower is better) Translates to: CYTPLGHLCPGRLHH*VIFLLLLLCRVLPR Trigger: ACGTGGCAGCACCCTACATAGCAAAAGCAGGAGAAAAATCACTCAATGGTGCAGTCTCCCTGGGCACAAATGCCCGAGAGGAGTGTAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 90 bp | CTCCAGTTAAGCTGCCATGCATGGGATCAGCAACTCCGTCAGTCATaGTGTCAAACTGCTCCCCGTCCTCACTGTCAATTGTGCTATTCT | + |
Preference number: 5 (lower is better) Translates to: LQLSCHAWDQQLRQS*CQTAPRPHCQLCYS Trigger: AGAATAGCACAATTGACAGTGAGGACGGGGAGCAGTTTGACAGCATGACTGACGGAGTTGCTGATCCCATGCATGGCAGCTTAACTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCAGAAGGTGCGTTTGTCTaGTCCTGGCCATTCTGGGTT | + |
Preference number: 5 (lower is better) Translates to: VVCMPALHYYVNQDKAFPEGAFV*SWPFWV Trigger: AACCCAGAATGGCCAGGACAAGACAAACGCACCTTC...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | CCAGCCTCACTGACTGGCCAACACCATAGCTCTGGCCCACAGATTTaGCTCCATAGTTGTTTTGCTGCAGGTGAACATTGGACATCATGT | + |
Preference number: 5 (lower is better) Translates to: PASLTGQHHSSGPQI*LHSCFAAGEHWTSC Trigger: ACATGATGTCCAATGTTCACCTGCAGCAAAACAACTATGGAGTCAAATCTGTGGGCCAGAGCTATGGTGTTGGCCAGTCAGTGAGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 90 bp | TCCTGGCCATTCTGGGTTTTTCCAACACCCCTGCAGTGGACTAGATaGAGAGTGATGGTTGAGGCTGTCATGTTGCTAGTATACACACCA | + |
Preference number: 5 (lower is better) Translates to: SWPFWVFPTPLQWTR*RVMVEAVMLLVYTP Trigger: TGGTGTGTATACTAGCAACATGACAGCCTCAACCATCACTCTGCATCTAGTCCACTGCAGGGGTGTTGGAAAAACCCAGAATGGCCAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCAGGGTGCTGCCACGTGTaGAAAATGTTCCCTGTAGAT | + |
Preference number: 5 (lower is better) Translates to: VVCMPALHYYVNQDKAFPGCCHV*KMFPVD Trigger: ATCTACAGGGAACATTTTCAACACGTGGCAGCACCC...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACCGTCCTCACTGTCAATaGTGCTATTCTGCCACTCAA | + |
Preference number: 5 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHRPHCQ*CYSATQ Trigger: TTGAGTGGCAGAATAGCACAATTGACAGTGAGGACG...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 90 bp | ATGCTGTCAAACTGCTCCCCGTCCTCACTGTCAATTGTGCTATTCTaGCACTCAATCTGTGGGTTTGGTAAGCGCTCTGCATTCTCAGAT | + |
Preference number: 5 (lower is better) Translates to: MLSNCSPSSLSIVLF*HSICGFGKRSAFSD Trigger: ATCTGAGAATGCAGAGCGCTTACCAAACCCACAGATTGAGTGGCAGAATAGCACAATTGACAGTGAGGACGGGGAGCAGTTTGACAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 90 bp | TTTGTCTTGTCCTGGCCATTCTGGGTTTTTCCAACACCCCTGCAGTaGACTAGATGCAGAGTGATGGTTGAGGCTGTCATGTTGCTAGTA | + |
Preference number: 5 (lower is better) Translates to: FVLSWPFWVFPTPLQ*TRCRVMVEAVMLLV Trigger: TACTAGCAACATGACAGCCTCAACCATCACTCTGCATCTAGTCCACTGCAGGGGTGTTGGAAAAACCCAGAATGGCCAGGACAAGACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCACATGCCCTTTTTGTCTaGAGGTTTGGGAGCTATCAG | + |
Preference number: 5 (lower is better) Translates to: VVCMPALHYYVNQDKAFPHALFV*RFGSYQ Trigger: CTGATAGCTCCCAAACCTCAAGACAAAAAGGGCATG...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATGGAAACTGGAGCATaGCCACCTAGTCCCAGCCTC | + |
Preference number: 5 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFMETGA*PPSPSL Trigger: GAGGCTGGGACTAGGTGGCAATGCTCCAGTTTCCAT...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCAGGTGTGACTGCCCTGTaGCAATGTCAAATCAAAGCT | + |
Preference number: 5 (lower is better) Translates to: VVCMPALHYYVNQDKAFPGVTAL*QCQIKA Trigger: AGCTTTGATTTGACATTGCAACAGGGCAGTCACACC...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTGGGGCATCCCTCAGGTaGTATGTGGTCACCAGGAGA | + |
Preference number: 5 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFGASLR*YVVTRR Trigger: TCTCCTGGTGACCACATACAACCTGAGGGATGCCCC...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTGAAGGTGCGTTTGTCTaGTCCTGGCCATTCTGGGTT | + |
Preference number: 5 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSEGAFV*SWPFWV Trigger: AACCCAGAATGGCCAGGACAAGACAAACGCACCTTC...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACATCAGCATCAAGGGCTaGGCTCGGGGAACTACAACA | + |
Preference number: 5 (lower is better) Translates to: CIHELPAYWFFTLHHRVYISIKG*ARGTTT Trigger: TGTTGTAGTTCCCCGAGCCAAGCCCTTGATGCTGAT...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTCACGGACTGAGACTGTaGAGGGATGGAAACTGGAGC | + |
Preference number: 5 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLHGLRL*RDGNWS Trigger: GCTCCAGTTTCCATCCCTCAACAGTCTCAGTCCGTG...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACCTCAACTACATCATCTaGGTCTACCTCACTATCAGA | + |
Preference number: 5 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHLNYII*VYLTIR Trigger: TCTGATAGTGAGGTAGACCAAGATGATGTAGTTGAG...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 90 bp | GTTGAATTTAAGTTGGGCTTTGGTATTGACAATCGGTTTACCATCTaGTGTGATGGCAACGACCGGACATTTCCAGAAGCAAGGGAGCTG | + |
Preference number: 5 (lower is better) Translates to: VEFKLGFGIDNRFTI*CDGNDRTFPEAREL Trigger: CAGCTCCCTTGCTTCTGGAAATGTCCGGTCGTTGCCATCACAGCAGATGGTAAACCGATTGTCAATACCAAAGCCCAACTTAAATTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
||
CDS GCA 90 bp | CGTTTTAGGCCCCATCTCTTCATCAATATGAACCATTCGCATGTGTaGTGCCATCTTCTCTACATCATTGAAGGTGGAACGGCAATACGG | + |
Preference number: 5 (lower is better) Translates to: RFRPHLFINMNHSHV*CHLLYIIEGGTAIR Trigger: CCGTATTGCCGTTCCACCTTCAATGATGTAGAGAAGATGGCAGCACACATGCGAATGGTTCATATTGATGAAGAGATGGGGCCTAAAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 90 bp | TACTTTTCACAGTCGCGGACACACTTCTTCCTCTTGTTACTGAAATaGGAGGCAATGTCACTCTTCCATAGCCATAGACTGGCAGCTAAC | + |
Preference number: 5 (lower is better) Translates to: YFSQSRTHFFLLLLK*EAMSLFHSHRLAAN Trigger: GTTAGCTGCCAGTCTATGGCTATGGAAGAGTGACATTGCCTCCCATTTCAGTAACAAGAGGAAGAAGTGTGTCCGCGACTGTGAAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCACTTAAACTGCCAAGATaGTTGACAGGAAGTTGGAAC | + |
Preference number: 5 (lower is better) Translates to: VVCMPALHYYVNQDKAFPLKLPR*LTGSWN Trigger: GTTCCAACTTCCTGTCAACAATCTTGGCAGTTTAAG...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAAGACAGCTTTGCAGTCAGACTGGAAGGAGAGCAGAAGTCCAGGATGCAACACACATTGGACATCATGTaGACTCCCGTTGAATTTAAG | + |
Preference number: 5 (lower is better) Translates to: EDSFAVRLEGEQKSRMQHTLDIM*TPVEFK Trigger: CTTAAATTCAACGGGAGTCAACATGATGTCCAATGT...GTGTTGCATCCTGGACTTCTGCTCTCCTTCCAGTCTGACTGCAAAGCTGTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTGTTGAGGCTGTCATGTaGCTAGTATACACACCAAGG | + |
Preference number: 5 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSVEAVM*LVYTPR Trigger: CCTTGGTGTGTATACTAGCAACATGACAGCCTCAAC...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 90 bp | TTTAGGCCCCATCTCTTCATCAATATGAACCATTCGCATGTGTGCTaGCATCTTCTCTACATCATTGAAGGTGGAACGGCAATACGGACA | + |
Preference number: 5 (lower is better) Translates to: FRPHLFINMNHSHVC*HLLYIIEGGTAIRT Trigger: TGTCCGTATTGCCGTTCCACCTTCAATGATGTAGAGAAGATGGCAGCACACATGCGAATGGTTCATATTGATGAAGAGATGGGGCCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 90 bp | CCTGGTTTCATTTCACATGTATTATCCTCAAAGTCTGAGATTTGTTaGGAACCAGGCCCACTCTCAGATGGTGAAGCACCATCTTTCCAC | + |
Preference number: 5 (lower is better) Translates to: PGFISHVLSSKSEIC*EPGPLSDGEAPSFH Trigger: GTGGAAAGATGGTGCTTCACCATCTGAGAGTGGGCCTGGTTCCCAACAAATCTCAGACTTTGAGGATAATACATGTGAAATGAAACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GTAGTGTGTATGCCCGCCCTGCACTACTATGTGAATCAGGATAAGGCTTTCCCATGCAGCAAAAAGGTTTaGTCCGATAGTCCTGATTTT | + |
Preference number: 5 (lower is better) Translates to: VVCMPALHYYVNQDKAFPCSKKV*SDSPDF Trigger: AAAATCAGGACTATCGGACAAAACCTTTTTGCTGCA...TGGGAAAGCCTTATCCTGATTCACATAGTAGTGCAGGGCGGGCATACACACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCAGCAGTAATACACGGCTaGCTCTACATTGTCAGCCTG | + |
Preference number: 5 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPAVIHG*LYIVSL Trigger: CAGGCTGACAATGTAGAGCAAGCCGTGTATTACTGC...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATGAAAAGGCATCGCTaGCAGTGGATGTTACACTCC | + |
Preference number: 5 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFMKRHR*QWMLHS Trigger: GGAGTGTAACATCCACTGCAAGCGATGCCTTTTCAT...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACATGAAAAGGCATCGCTaGCAGTGGATGTTACACTCC | + |
Preference number: 5 (lower is better) Translates to: CIHELPAYWFFTLHHRVYMKRHR*QWMLHS Trigger: GGAGTGTAACATCCACTGCAAGCGATGCCTTTTCAT...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACATGCCCTTTTTGTCTaGAGGTTTGGGAGCTATCAG | + |
Preference number: 5 (lower is better) Translates to: QLTGFSHFITESTREESEHALFV*RFGSYQ Trigger: CTGATAGCTCCCAAACCTCAAGACAAAAAGGGCATG...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTATGGAAACTGGAGCATaGCCACCTAGTCCCAGCCTC | + |
Preference number: 5 (lower is better) Translates to: ESRYISYVAGLFCKIVQGMETGA*PPSPSL Trigger: GAGGCTGGGACTAGGTGGCAATGCTCCAGTTTCCAT...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTCACGGACTGAGACTGTaGAGGGATGGAAACTGGAGC | + |
Preference number: 5 (lower is better) Translates to: ESRYISYVAGLFCKIVQGHGLRL*RDGNWS Trigger: GCTCCAGTTTCCATCCCTCAACAGTCTCAGTCCGTG...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCTTTTGGTTGTGGCTTaGGAGGAACTGGGGCATTAT | + |
Preference number: 5 (lower is better) Translates to: CIHELPAYWFFTLHHRVYLLVVA*EELGHY Trigger: ATAATGCCCCAGTTCCTCCAAAGCCACAACCAAAAG...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | CAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAATTCCTGAACTTTTGGTaGTGGCTTTGGAGGAACTGG | + |
Preference number: 5 (lower is better) Translates to: QLTGFSHFITESTREESEFLNFW*WLWRNW Trigger: CCAGTTCCTCCAAAGCCACAACCAAAAGTTCAGGAA...TTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTGCCGAGAAGGTGCGTTaGTCTTGTCCTGGCCATTCT | + |
Preference number: 5 (lower is better) Translates to: ESRYISYVAGLFCKIVQGAEKVR*SCPGHS Trigger: AGAATGGCCAGGACAAGACAAACGCACCTTCTCGGC...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATGCCGAGAAGGTGCGTTaGTCTTGTCCTGGCCATTCT | + |
Preference number: 5 (lower is better) Translates to: TVLVALIQHSYRSKRCQNAEKVR*SCPGHS Trigger: AGAATGGCCAGGACAAGACAAACGCACCTTCTCGGC...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTACACACTTCTTCCTCTaGTTACTGAAATGGGAGGCA | + |
Preference number: 5 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSTHFFL*LLKWEA Trigger: TGCCTCCCATTTCAGTAACAAGAGGAAGAAGTGTGT...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTCACTGTGACTGGTCCTaGGACCAAAACCCTTCAACT | + |
Preference number: 5 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFHCDWS*DQNPST Trigger: AGTTGAAGGGTTTTGGTCCAAGGACCAGTCACAGTG...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 90 bp | CTCTCAGATGGTGAAGCACCATCTTTCCACTCAACTACATCATCTTaGTCTACCTCACTATCAGAGGCATCATGCATTAATTTGGCTGGT | + |
Preference number: 5 (lower is better) Translates to: LSDGEAPSFHSTTSS*STSLSEASCINLAG Trigger: ACCAGCCAAATTAATGCATGATGCCTCTGATAGTGAGGTAGACCAAGATGATGTAGTTGAGTGGAAAGATGGTGCTTCACCATCTGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTACGGCTTGCTCTACATaGTCAGCCTGCTTAGGTTTA | + |
Preference number: 5 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFTACST*SACLGL Trigger: TAAACCTAAGCAGGCTGACAATGTAGAGCAAGCCGT...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCGGGTGCTGCCACGTGTaGAAAATGTTCCCTGTAGAT | + |
Preference number: 5 (lower is better) Translates to: PYYRRVKLLLGKLDIAFIGCCHV*KMFPVD Trigger: ATCTACAGGGAACATTTTCAACACGTGGCAGCACCC...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTATCTTCTCTACATCATaGAAGGTGGAACGGCAATAC | + |
Preference number: 5 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSIFSTS*KVERQY Trigger: GTATTGCCGTTCCACCTTCAATGATGTAGAGAAGAT...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTTTCCTGAACTTTTGGTaGTGGCTTTGGAGGAACTGG | + |
Preference number: 5 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFFLNFW*WLWRNW Trigger: CCAGTTCCTCCAAAGCCACAACCAAAAGTTCAGGAA...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGAGCAGCACACCAGGCTaGTACTTTTCACAGTCGCGG | + |
Preference number: 5 (lower is better) Translates to: PDIYLMLLASFARLYKVMSSTPG*YFSQSR Trigger: CCGCGACTGTGAAAAGTACAAGCCTGGTGTGCTGCT...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTCAACTACATCATCTaGGTCTACCTCACTATCAGA | + |
Preference number: 5 (lower is better) Translates to: ATSLLVFHTSSPSLPEKSLNYII*VYLTIR Trigger: TCTGATAGTGAGGTAGACCAAGATGATGTAGTTGAG...ACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | CAATATGAACCATTCGCATGTGTGCTGCCATCTTCTCTACATCATTaGAGGTGGAACGGCAATACGGACAAGACAGACCATGAATTAACA | + |
Preference number: 5 (lower is better) Translates to: QYEPFACVLPSSLHH*RWNGNTDKTDHELT Trigger: TGTTAATTCATGGTCTGTCTTGTCCGTATTGCCGTTCCACCTTCAATGATGTAGAGAAGATGGCAGCACACATGCGAATGGTTCATATTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTAGGCAGAGAAGAATTTaGAGGAAAACGGACAAGCAC | + |
Preference number: 5 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFRQRRI*RKTDKH Trigger: GTGCTTGTCCGTTTTCCTCAAAATTCTTCTCTGCCT...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCAATTTTTCTCCTGCTTTaGCTATGTAGGGTGCTGCCA | + |
Preference number: 5 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPIFLLL*LCRVLP Trigger: TGGCAGCACCCTACATAGCAAAAGCAGGAGAAAAAT...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATTTTTCTCCTGCTTTaGCTATGTAGGGTGCTGCCA | + |
Preference number: 5 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFIFLLL*LCRVLP Trigger: TGGCAGCACCCTACATAGCAAAAGCAGGAGAAAAAT...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCAGTTGGGCTTTGGTATaGACAATCGGTTTACCATCT | + |
Preference number: 5 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFSWALV*TIGLPS Trigger: AGATGGTAAACCGATTGTCAATACCAAAGCCCAACT...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTGACTCCATAGTTGTTTaGCTGCAGGTGAACATTGGA | + |
Preference number: 5 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLDSIVV*LQVNIG Trigger: TCCAATGTTCACCTGCAGCAAAACAACTATGGAGTC...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGACCTCCCATTCCCACTaGGAAGTAACTGTTTCACGG | + |
Preference number: 5 (lower is better) Translates to: RVQIYILCCWPLLQDCTRTSHSH*EVTVSR Trigger: CCGTGAAACAGTTACTTCCAAGTGGGAATGGGAGGT...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTACACACTTCTTCCTCTaGTTACTGAAATGGGAGGCA | + |
Preference number: 5 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLTHFFL*LLKWEA Trigger: TGCCTCCCATTTCAGTAACAAGAGGAAGAAGTGTGT...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACACAGTCTTGCTAGCATaGACTCTTGAGTCTTTCTCA | + |
Preference number: 5 (lower is better) Translates to: CIHELPAYWFFTLHHRVYTVLLA*TLESFS Trigger: TGAGAAAGACTCAAGAGTCAATGCTAGCAAGACTGT...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATCACTGTGACTGGTCCTaGGACCAAAACCCTTCAACT | + |
Preference number: 5 (lower is better) Translates to: TVLVALIQHSYRSKRCQNHCDWS*DQNPST Trigger: AGTTGAAGGGTTTTGGTCCAAGGACCAGTCACAGTG...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | AAGCTCAAAGTAGAATCCGTTTTAGGCCCCATCTCTTCATCAATATaGACCATTCGCATGTGTGCTGCCATCTTCTCTACATCATTGAAG | + |
Preference number: 5 (lower is better) Translates to: KLKVESVLGPISSSI*TIRMCAAIFSTSLK Trigger: CTTCAATGATGTAGAGAAGATGGCAGCACACATGCGAATGGTTCATATTGATGAAGAGATGGGGCCTAAAACGGATTCTACTTTGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGACGGCTTGCTCTACATaGTCAGCCTGCTTAGGTTTA | + |
Preference number: 5 (lower is better) Translates to: RVQIYILCCWPLLQDCTRTACST*SACLGL Trigger: TAAACCTAAGCAGGCTGACAATGTAGAGCAAGCCGT...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGGCAGTAATACACGGCTaGCTCTACATTGTCAGCCTG | + |
Preference number: 5 (lower is better) Translates to: PDIYLMLLASFARLYKVMAVIHG*LYIVSL Trigger: CAGGCTGACAATGTAGAGCAAGCCGTGTATTACTGC...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCATCACCGAGTCTACCCCGTTGAATTTAAGTaGGGCTTTGGTATTGACAAT | + |
Preference number: 5 (lower is better) Translates to: CIHELPAYWFFTLHHRVYPVEFK*GFGIDN Trigger: ATTGTCAATACCAAAGCCCAACTTAAATTCAACGGG...GTAGACTCGGTGATGAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCACATTGGACATCATGTaGACTCCCGTTGAATTTAAG | + |
Preference number: 5 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFTLDIM*TPVEFK Trigger: CTTAAATTCAACGGGAGTCAACATGATGTCCAATGT...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGACCTCCCATTCCCACTaGGAAGTAACTGTTTCACGG | + |
Preference number: 5 (lower is better) Translates to: PDIYLMLLASFARLYKVMTSHSH*EVTVSR Trigger: CCGTGAAACAGTTACTTCCAAGTGGGAATGGGAGGT...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTGGTGTGACTGCCCTGTaGCAATGTCAAATCAAAGCT | + |
Preference number: 5 (lower is better) Translates to: ESRYISYVAGLFCKIVQGGVTAL*QCQIKA Trigger: AGCTTTGATTTGACATTGCAACAGGGCAGTCACACC...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATGTTGAGGCTGTCATGTaGCTAGTATACACACCAAGG | + |
Preference number: 5 (lower is better) Translates to: TVLVALIQHSYRSKRCQNVEAVM*LVYTPR Trigger: CCTTGGTGTGTATACTAGCAACATGACAGCCTCAAC...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GGTCCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTGCATCATGCATTAATTaGGCTGGTTCCTCAGTCAAA | + |
Preference number: 5 (lower is better) Translates to: GPYYRRVKLLLGKLDIAFASCIN*AGSSVK Trigger: TTTGACTGAGGAACCAGCCAAATTAATGCATGATGC...AAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATCGTCCTCACTGTCAATaGTGCTATTCTGCCACTCAA | + |
Preference number: 5 (lower is better) Translates to: TVLVALIQHSYRSKRCQNRPHCQ*CYSATQ Trigger: TTGAGTGGCAGAATAGCACAATTGACAGTGAGGACG...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | TTGTCAACAGTCTTGCTAGCATTGACTCTTGAGTCTTTCTCATCGTaGTTTTCAAACAGCCACTCAGCATCAAAATCCATCTCGTGTTTG | + |
Preference number: 5 (lower is better) Translates to: LSTVLLALTLESFSS*FSNSHSASKSISCL Trigger: CAAACACGAGATGGATTTTGATGCTGAGTGGCTGTTTGAAAATCACGATGAGAAAGACTCAAGAGTCAATGCTAGCAAGACTGTTGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | CCCAAGGTTATGCTTTTTGTCAACAGTCTTGCTAGCATTGACTCTTaGGTCTTTCTCATCGTGATTTTCAAACAGCCACTCAGCATCAAA | + |
Preference number: 5 (lower is better) Translates to: PKVMLFVNSLASIDS*VFLIVIFKQPLSIK Trigger: TTTGATGCTGAGTGGCTGTTTGAAAATCACGATGAGAAAGACTCAAGAGTCAATGCTAGCAAGACTGTTGACAAAAAGCATAACCTTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TATGTGCAAAAACTAAGTCTGTCCAAAGGTCCATACTATCGCAGGGTCAAGCTTTGCAGCAAAAAGGTTTaGTCCGATAGTCCTGATTTT | + |
Preference number: 5 (lower is better) Translates to: YVQKLSLSKGPYYRRVKLCSKKV*SDSPDF Trigger: AAAATCAGGACTATCGGACAAAACCTTTTTGCTGCA...AAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAGTTTTTGCACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TTTCACACTTCATCACCGAGTCTACCAGAGAAGAGTCTGAACAAAGATCAACCACCCGTTGAATTTAAGTaGGGCTTTGGTATTGACAAT | + |
Preference number: 5 (lower is better) Translates to: FHTSSPSLPEKSLNKDQPPVEFK*GFGIDN Trigger: ATTGTCAATACCAAAGCCCAACTTAAATTCAACGGG...TGGTTGATCTTTGTTCAGACTCTTCTCTGGTAGACTCGGTGATGAAGTGTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | ACTGTGCTTGTTGCTCTGATACAACACTCTTACAGGTCTAAAAGGTGTCAAAATGACTCCATAGTTGTTTaGCTGCAGGTGAACATTGGA | + |
Preference number: 5 (lower is better) Translates to: TVLVALIQHSYRSKRCQNDSIVV*LQVNIG Trigger: TCCAATGTTCACCTGCAGCAAAACAACTATGGAGTC...ATTTTGACACCTTTTAGACCTGTAAGAGTGTTGTATCAGAGCAACAAGCACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | TACTTCTCCCTGTGTGCATTCATGAGCTACCAGCTTACTGGTTTTTCACACTTCAAAGCTCGTTACAGATaGTACAGATTTTCCACTTCT | + |
Preference number: 5 (lower is better) Translates to: YFSLCAFMSYQLTGFSHFKARYR*YRFSTS Trigger: AGAAGTGGAAAATCTGTACAATCTGTAACGAGCTTT...GAAGTGTGAAAAACCAGTAAGCTGGTAGCTCATGAATGCACACAGGGAGAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | CCATACTATCGCAGGGTCAAGCTTCTGCTAGGTAAACTAGATATAGCATTTATCACAGTCTTGCTAGCATaGACTCTTGAGTCTTTCTCA | + |
Preference number: 5 (lower is better) Translates to: PYYRRVKLLLGKLDIAFITVLLA*TLESFS Trigger: TGAGAAAGACTCAAGAGTCAATGCTAGCAAGACTGT...GATAAATGCTATATCTAGTTTACCTAGCAGAAGCTTGACCCTGCGATAGTATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 90 bp | CACTCAACTACATCATCTTGGTCTACCTCACTATCAGAGGCATCATaGATTAATTTGGCTGGTTCCTCAGTCAAATGGATAGTTTCATAT | + |
Preference number: 5 (lower is better) Translates to: HSTTSSWSTSLSEAS*INLAGSSVKWIVSY Trigger: ATATGAAACTATCCATTTGACTGAGGAACCAGCCAAATTAATGCATGATGCCTCTGATAGTGAGGTAGACCAAGATGATGTAGTTGAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGCTTAAACTGCCAAGATaGTTGACAGGAAGTTGGAAC | + |
Preference number: 5 (lower is better) Translates to: RVQIYILCCWPLLQDCTRLKLPR*LTGSWN Trigger: GTTCCAACTTCCTGTCAACAATCTTGGCAGTTTAAG...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTAGTTGGGCTTTGGTATaGACAATCGGTTTACCATCT | + |
Preference number: 5 (lower is better) Translates to: ESRYISYVAGLFCKIVQGSWALV*TIGLPS Trigger: AGATGGTAAACCGATTGTCAATACCAAAGCCCAACT...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | GAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTGCATCATGCATTAATTaGGCTGGTTCCTCAGTCAAA | + |
Preference number: 5 (lower is better) Translates to: ESRYISYVAGLFCKIVQGASCIN*AGSSVK Trigger: TTTGACTGAGGAACCAGCCAAATTAATGCATGATGC...ACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 90 bp | ACTCCCGCTTCCATTGGATTCTTCTTCCAAATGTTCAAAACTATCTaGGAAGCTATCATCTTCTTTCCCAAGGTTATGCTTTTTGTCAAC | + |
Preference number: 5 (lower is better) Translates to: TPASIGFFFQMFKTI*EAIIFFPKVMLFVN Trigger: GTTGACAAAAAGCATAACCTTGGGAAAGAAGATGATAGCTTCTCAGATAGTTTTGAACATTTGGAAGAAGAATCCAATGGAAGCGGGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGATCTTCTCTACATCATaGAAGGTGGAACGGCAATAC | + |
Preference number: 5 (lower is better) Translates to: PDIYLMLLASFARLYKVMIFSTS*KVERQY Trigger: GTATTGCCGTTCCACCTTCAATGATGTAGAGAAGAT...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 90 bp | TGTTCAAAACTATCTGAGAAGCTATCATCTTCTTTCCCAAGGTTATaGTTTTTGTCAACAGTCTTGCTAGCATTGACTCTTGAGTCTTTC | + |
Preference number: 5 (lower is better) Translates to: CSKLSEKLSSSFPRL*FLSTVLLALTLESF Trigger: GAAAGACTCAAGAGTCAATGCTAGCAAGACTGTTGACAAAAAGCATAACCTTGGGAAAGAAGATGATAGCTTCTCAGATAGTTTTGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | AGAGTCCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGAAAGCTCGTTACAGATaGTACAGATTTTCCACTTCT | + |
Preference number: 5 (lower is better) Translates to: RVQIYILCCWPLLQDCTRKARYR*YRFSTS Trigger: AGAAGTGGAAAATCTGTACAATCTGTAACGAGCTTT...CCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGGACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS-3UTR CAA 90 bp | CCAGATATATATCTTATGTTGCTGGCCTCTTTTGCAAGATTGTACAAGGTTATGTGGGTCCTTTTAGTATaGAAAAGCAAAGAGGGCAAA | + |
Preference number: 5 (lower is better) Translates to: PDIYLMLLASFARLYKVMWVLLV*KSKEGK Trigger: TTTGCCCTCTTTGCTTTTCAATACTAAAAGGACCCA...CATAACCTTGTACAATCTTGCAAAAGAGGCCAGCAACATAAGATATATATCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | AGGGAGACTTCACTTGGCCTGGGGGTAGAGAGGTGTTaGCAGTCTGCAGGGAGTACCTGGCTGCTGCTGGGG | + |
Preference number: 6 (lower is better) Translates to: RETSLGLGVERC*QSAGSTWLLLG Trigger: CCCCAGCAGCAGCCAGGTACTCCCTGCAGACTGCCAACACCTCTCTACCCCCAGGCCAAGTGAAGTCTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | AGGGGCCAGGCCTGGAGACTGATTGAGCCGAGAAGGTaGGTTTGTCTTGTCCTGGCCATTCTGGGTTTTTCC | + |
Preference number: 6 (lower is better) Translates to: RGQAWRLIEPRR*VCLVLAILGFS Trigger: GGAAAAACCCAGAATGGCCAGGACAAGACAAACGCACCTTCTCGGCTCAATCAGTCTCCAGGCCTGGCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | AGCAAGGGAGCTGATTCGTGGTGGGAGTCCCATGCCCTTTTTGTCTaGAGGTTTGGGAGCTATCAGCATCAAGGGCTTGGCTCGGGGAAC | + |
Preference number: 6 (lower is better) Translates to: SKGADSWWESHALFV*RFGSYQHQGLGSGN Trigger: GTTCCCCGAGCCAAGCCCTTGATGCTGATAGCTCCCAAACCTCAAGACAAAAAGGGCATGGGACTCCCACCACGAATCAGCTCCCTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | TTGTACAGATTTTCCACTTCTGAGTGGCACAGTGGTTaGTTGGAGGAGGGCCTGTGGCGGCTGGTGGAGGTT | + |
Preference number: 6 (lower is better) Translates to: LYRFSTSEWHSG*LEEGLWRLVEV Trigger: AACCTCCACCAGCCGCCACAGGCCCTCCTCCAAGCAACCACTGTGCCACTCAGAAGTGGAAAATCTGTACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | ACAGATTTTCCACTTCTGAGTGGCACAGTGGTTGCTTaGAGGAGGGCCTGTGGCGGCTGGTGGAGGTTTAGA | + |
Preference number: 6 (lower is better) Translates to: TDFPLLSGTVVA*RRACGGWWRFR Trigger: TCTAAACCTCCACCAGCCGCCACAGGCCCTCCTCCAAGCAACCACTGTGCCACTCAGAAGTGGAAAATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | AGCTGCCATGCATGGGATCAGCAACTCCGTCAGTCATaGTGTCAAACTGCTCCCCGTCCTCACTGTCAATTG | + |
Preference number: 6 (lower is better) Translates to: SCHAWDQQLRQS*CQTAPRPHCQL Trigger: CAATTGACAGTGAGGACGGGGAGCAGTTTGACAGCATGACTGACGGAGTTGCTGATCCCATGCATGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | CCGGACATTTCCAGAAGCAAGGGAGCTGATTCGTGGTaGGAGTCCCATGCCCTTTTTGTCTTGAGGTTTGGG | + |
Preference number: 6 (lower is better) Translates to: PDISRSKGADSW*ESHALFVLRFG Trigger: CCCAAACCTCAAGACAAAAAGGGCATGGGACTCCCACCACGAATCAGCTCCCTTGCTTCTGGAAATGTCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | GCTCGTTACAGATTGTACAGATTTTCCACTTCTGAGTaGCACAGTGGTTGCTTGGAGGAGGGCCTGTGGCGG | + |
Preference number: 6 (lower is better) Translates to: ARYRLYRFSTSE*HSGCLEEGLWR Trigger: CCGCCACAGGCCCTCCTCCAAGCAACCACTGTGCCACTCAGAAGTGGAAAATCTGTACAATCTGTAACGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | AGCCGAGAAGGTGCGTTTGTCTTGTCCTGGCCATTCTaGGTTTTTCCAACACCCCTGCAGTGGACTAGATGC | + |
Preference number: 6 (lower is better) Translates to: SREGAFVLSWPF*VFPTPLQWTRC Trigger: GCATCTAGTCCACTGCAGGGGTGTTGGAAAAACCCAGAATGGCCAGGACAAGACAAACGCACCTTCTCGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | GCTGATTCGTGGTGGGAGTCCCATGCCCTTTTTGTCTaGAGGTTTGGGAGCTATCAGCATCAAGGGCTTGGC | + |
Preference number: 6 (lower is better) Translates to: ADSWWESHALFV*RFGSYQHQGLG Trigger: GCCAAGCCCTTGATGCTGATAGCTCCCAAACCTCAAGACAAAAAGGGCATGGGACTCCCACCACGAATCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | GGGGCCTCTGCTCAGCACCTAGCCCAAAAGACCTCCCATTCCCACTaGGAAGTAACTGTTTCACGGACTGAGACTGTTGAGGGATGGAAA | + |
Preference number: 6 (lower is better) Translates to: GASAQHLAQKTSHSH*EVTVSRTETVEGWK Trigger: TTTCCATCCCTCAACAGTCTCAGTCCGTGAAACAGTTACTTCCAAGTGGGAATGGGAGGTCTTTTGGGCTAGGTGCTGAGCAGAGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 72 bp | ATGGCAACGACCGGACATTTCCAGAAGCAAGGGAGCTaGTTCGTGGTGGGAGTCCCATGCCCTTTTTGTCTT | + |
Preference number: 6 (lower is better) Translates to: MATTGHFQKQGS*FVVGVPCPFCL Trigger: AAGACAAAAAGGGCATGGGACTCCCACCACGAATCAGCTCCCTTGCTTCTGGAAATGTCCGGTCGTTGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | GGCTGCTCAGCTTCACTCCAGTTAAGCTGCCATGCATaGGATCAGCAACTCCGTCAGTCATGCTGTCAAACT | + |
Preference number: 6 (lower is better) Translates to: GCSASLQLSCHA*DQQLRQSCCQT Trigger: AGTTTGACAGCATGACTGACGGAGTTGCTGATCCCATGCATGGCAGCTTAACTGGAGTGAAGCTGAGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | CTCCGTCAGTCATGCTGTCAAACTGCTCCCCGTCCTCACTGTCAATaGTGCTATTCTGCCACTCAATCTGTGGGTTTGGTAAGCGCTCTG | + |
Preference number: 6 (lower is better) Translates to: LRQSCCQTAPRPHCQ*CYSATQSVGLVSAL Trigger: CAGAGCGCTTACCAAACCCACAGATTGAGTGGCAGAATAGCACAATTGACAGTGAGGACGGGGAGCAGTTTGACAGCATGACTGACGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 72 bp | TCGGGCATTTGTGCCCAGGGAGACTGCACCATTGAGTaGTTTTTCTCCTGCTTTTGCTATGTAGGGTGCTGC | + |
Preference number: 6 (lower is better) Translates to: SGICAQGDCTIE*FFSCFCYVGCC Trigger: GCAGCACCCTACATAGCAAAAGCAGGAGAAAAATCACTCAATGGTGCAGTCTCCCTGGGCACAAATGCCCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 72 bp | CCTCTCGGGCATTTGTGCCCAGGGAGACTGCACCATTaGGTGATTTTTCTCCTGCTTTTGCTATGTAGGGTG | + |
Preference number: 6 (lower is better) Translates to: PLGHLCPGRLHH*VIFLLLLLCRV Trigger: CACCCTACATAGCAAAAGCAGGAGAAAAATCACTCAATGGTGCAGTCTCCCTGGGCACAAATGCCCGAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | AACTGCTCCCCGTCCTCACTGTCAATTGTGCTATTCTaGCACTCAATCTGTGGGTTTGGTAAGCGCTCTGCA | + |
Preference number: 6 (lower is better) Translates to: NCSPSSLSIVLF*HSICGFGKRSA Trigger: TGCAGAGCGCTTACCAAACCCACAGATTGAGTGGCAGAATAGCACAATTGACAGTGAGGACGGGGAGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | GAAGTAACTGTTTCACGGACTGAGACTGTTGAGGGATaGAAACTGGAGCATTGCCACCTAGTCCCAGCCTCA | + |
Preference number: 6 (lower is better) Translates to: EVTVSRTETVEG*KLEHCHLVPAS Trigger: TGAGGCTGGGACTAGGTGGCAATGCTCCAGTTTCCATCCCTCAACAGTCTCAGTCCGTGAAACAGTTACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 72 bp | CCACGTGTTGAAAATGTTCCCTGTAGATGTGCTTCCTaGCGATCTCGTAGAGAGGGTCTCGGTAAGTGCACT | + |
Preference number: 6 (lower is better) Translates to: PRVENVPCRCAS*RSRREGLGKCT Trigger: AGTGCACTTACCGAGACCCTCTCTACGAGATCGTCAGGAAGCACATCTACAGGGAACATTTTCAACACGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 72 bp | CTGACTGGCCAACACCATAGCTCTGGCCCACAGATTTaGCTCCATAGTTGTTTTGCTGCAGGTGAACATTGG | + |
Preference number: 6 (lower is better) Translates to: LTGQHHSSGPQI*LHSCFAAGEHW Trigger: CCAATGTTCACCTGCAGCAAAACAACTATGGAGTCAAATCTGTGGGCCAGAGCTATGGTGTTGGCCAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | CGATCTCGTAGAGAGGGTCTCGGTAAGTGCACTTCTTaGAGTAATACACGGCTTGCTCTACATTGTCAGCCT | + |
Preference number: 6 (lower is better) Translates to: RSRREGLGKCTS*SNTRLALHCQP Trigger: AGGCTGACAATGTAGAGCAAGCCGTGTATTACTGCAAGAAGTGCACTTACCGAGACCCTCTCTACGAGATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | TGTCTTGAGGTTTGGGAGCTATCAGCATCAAGGGCTTaGCTCGGGGAACTACAACATTTGTGTGTCCGATCA | + |
Preference number: 6 (lower is better) Translates to: CLEVWELSASRA*LGELQHLCVRS Trigger: TGATCGGACACACAAATGTTGTAGTTCCCCGAGCCAAGCCCTTGATGCTGATAGCTCCCAAACCTCAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | TTGGCAGCTGGCTTACTGCTCCTTGCATCTTCACTCTaGGAAGACTCATCAGACCAGGTTCCTGGTTTCATT | + |
Preference number: 6 (lower is better) Translates to: LAAGLLLLASSL*EDSSDQVPGFI Trigger: AATGAAACCAGGAACCTGGTCTGATGAGTCTTCCCAGAGTGAAGATGCAAGGAGCAGTAAGCCAGCTGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 72 bp | AAAAGCTCGTTACAGATTGTACAGATTTTCCACTTCTaGGTGGCACAGTGGTTGCTTGGAGGAGGGCCTGTG | + |
Preference number: 6 (lower is better) Translates to: KSSLQIVQIFHF*VAQWLLGGGPV Trigger: CACAGGCCCTCCTCCAAGCAACCACTGTGCCACTCAGAAGTGGAAAATCTGTACAATCTGTAACGAGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 72 bp | CCATTCGCATGTGTGCTGCCATCTTCTCTACATCATTaGAGGTGGAACGGCAATACGGACAAGACAGACCAT | + |
Preference number: 6 (lower is better) Translates to: PFACVLPSSLHH*RWNGNTDKTDH Trigger: ATGGTCTGTCTTGTCCGTATTGCCGTTCCACCTTCAATGATGTAGAGAAGATGGCAGCACACATGCGAATGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | TTCTGGGTTTTTCCAACACCCCTGCAGTGGACTAGATaGAGAGTGATGGTTGAGGCTGTCATGTTGCTAGTA | + |
Preference number: 6 (lower is better) Translates to: FWVFPTPLQWTR*RVMVEAVMLLV Trigger: TACTAGCAACATGACAGCCTCAACCATCACTCTGCATCTAGTCCACTGCAGGGGTGTTGGAAAAACCCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | CCCTCAGGTTGTATGTGGTCACCAGGAGATGAATGTTaGTGTGACTGCCCTGTTGCAATGTCAAATCAAAGC | + |
Preference number: 6 (lower is better) Translates to: PSGCMWSPGDEC*CDCPVAMSNQS Trigger: GCTTTGATTTGACATTGCAACAGGGCAGTCACACCAACATTCATCTCCTGGTGACCACATACAACCTGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | CAGTCGCGGACACACTTCTTCCTCTTGTTACTGAAATaGGAGGCAATGTCACTCTTCCATAGCCATAGACTG | + |
Preference number: 6 (lower is better) Translates to: QSRTHFFLLLLK*EAMSLFHSHRL Trigger: CAGTCTATGGCTATGGAAGAGTGACATTGCCTCCCATTTCAGTAACAAGAGGAAGAAGTGTGTCCGCGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | GTCTCGGTAAGTGCACTTCTTGCAGTAATACACGGCTaGCTCTACATTGTCAGCCTGCTTAGGTTTAAGGCC | + |
Preference number: 6 (lower is better) Translates to: VSVSALLAVIHG*LYIVSLLRFKA Trigger: GGCCTTAAACCTAAGCAGGCTGACAATGTAGAGCAAGCCGTGTATTACTGCAAGAAGTGCACTTACCGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | ACCATTCGCATGTGTGCTGCCATCTTCTCTACATCATaGAAGGTGGAACGGCAATACGGACAAGACAGACCA | + |
Preference number: 6 (lower is better) Translates to: TIRMCAAIFSTS*KVERQYGQDRP Trigger: TGGTCTGTCTTGTCCGTATTGCCGTTCCACCTTCAATGATGTAGAGAAGATGGCAGCACACATGCGAATGGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | CGTCCTCACTGTCAATTGTGCTATTCTGCCACTCAATCTGTGGGTTaGGTAAGCGCTCTGCATTCTCAGATGCATTTTCCCACTGTGACT | + |
Preference number: 6 (lower is better) Translates to: RPHCQLCYSATQSVG*VSALHSQMHFPTVT Trigger: AGTCACAGTGGGAAAATGCATCTGAGAATGCAGAGCGCTTACCAAACCCACAGATTGAGTGGCAGAATAGCACAATTGACAGTGAGGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | GTAGAGAGGGTCTCGGTAAGTGCACTTCTTGCAGTAATACACGGCTaGCTCTACATTGTCAGCCTGCTTAGGTTTAAGGCCATCGTTTTT | + |
Preference number: 6 (lower is better) Translates to: VERVSVSALLAVIHG*LYIVSLLRFKAIVF Trigger: AAAAACGATGGCCTTAAACCTAAGCAGGCTGACAATGTAGAGCAAGCCGTGTATTACTGCAAGAAGTGCACTTACCGAGACCCTCTCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | ACACCAGGCTTGTACTTTTCACAGTCGCGGACACACTTCTTCCTCTaGTTACTGAAATGGGAGGCAATGTCACTCTTCCATAGCCATAGA | + |
Preference number: 6 (lower is better) Translates to: TPGLYFSQSRTHFFL*LLKWEAMSLFHSHR Trigger: TCTATGGCTATGGAAGAGTGACATTGCCTCCCATTTCAGTAACAAGAGGAAGAAGTGTGTCCGCGACTGTGAAAAGTACAAGCCTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | AAGTTGGGCTTTGGTATTGACAATCGGTTTACCATCTaGTGTGATGGCAACGACCGGACATTTCCAGAAGCA | + |
Preference number: 6 (lower is better) Translates to: KLGFGIDNRFTI*CDGNDRTFPEA Trigger: TGCTTCTGGAAATGTCCGGTCGTTGCCATCACAGCAGATGGTAAACCGATTGTCAATACCAAAGCCCAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | AATGGGAGGCAATGTCACTCTTCCATAGCCATAGACTaGCAGCTAACTTCTCAATTTCTCTCCTGGTGGGAT | + |
Preference number: 6 (lower is better) Translates to: NGRQCHSSIAID*QLTSQFLSWWD Trigger: ATCCCACCAGGAGAGAAATTGAGAAGTTAGCTGCCAGTCTATGGCTATGGAAGAGTGACATTGCCTCCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | TTCTCCTGCTTTTGCTATGTAGGGTGCTGCCACGTGTaGAAAATGTTCCCTGTAGATGTGCTTCCTGACGAT | + |
Preference number: 6 (lower is better) Translates to: FSCFCYVGCCHV*KMFPVDVLPDD Trigger: ATCGTCAGGAAGCACATCTACAGGGAACATTTTCAACACGTGGCAGCACCCTACATAGCAAAAGCAGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | CGAAGTGAACGCTATAGACATTCTCAGGGAAAAGCTCGTTACAGATaGTACAGATTTTCCACTTCTGAGTGGCACAGTGGTTGCTTGGAG | + |
Preference number: 6 (lower is better) Translates to: RSERYRHSQGKARYR*YRFSTSEWHSGCLE Trigger: CTCCAAGCAACCACTGTGCCACTCAGAAGTGGAAAATCTGTACAATCTGTAACGAGCTTTTCCCTGAGAATGTCTATAGCGTTCACTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | GTTGTATGTGGTCACCAGGAGATGAATGTTGGTGTGACTGCCCTGTaGCAATGTCAAATCAAAGCTCAAAGTAGAATCCGTTTTAGGCCC | + |
Preference number: 6 (lower is better) Translates to: VVCGHQEMNVGVTAL*QCQIKAQSRIRFRP Trigger: GGGCCTAAAACGGATTCTACTTTGAGCTTTGATTTGACATTGCAACAGGGCAGTCACACCAACATTCATCTCCTGGTGACCACATACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | CCCCATCTCTTCATCAATATGAACCATTCGCATGTGTaGTGCCATCTTCTCTACATCATTGAAGGTGGAACG | + |
Preference number: 6 (lower is better) Translates to: PHLFINMNHSHV*CHLLYIIEGGT Trigger: CGTTCCACCTTCAATGATGTAGAGAAGATGGCAGCACACATGCGAATGGTTCATATTGATGAAGAGATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | ATAGCTCTGGCCCACAGATTTGACTCCATAGTTGTTTaGCTGCAGGTGAACATTGGACATCATGTTGACTCC | + |
Preference number: 6 (lower is better) Translates to: IALAHRFDSIVV*LQVNIGHHVDS Trigger: GGAGTCAACATGATGTCCAATGTTCACCTGCAGCAAAACAACTATGGAGTCAAATCTGTGGGCCAGAGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 72 bp | GTAGAATCCGTTTTAGGCCCCATCTCTTCATCAATATaGACCATTCGCATGTGTGCTGCCATCTTCTCTACA | + |
Preference number: 6 (lower is better) Translates to: VESVLGPISSSI*TIRMCAAIFST Trigger: TGTAGAGAAGATGGCAGCACACATGCGAATGGTTCATATTGATGAAGAGATGGGGCCTAAAACGGATTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS TCA 72 bp | TCCTGGTTTCATTTCACATGTATTATCCTCAAAGTCTaGGATTTGTTGGGAACCAGGCCCACTCTCAGATGG | + |
Preference number: 6 (lower is better) Translates to: SWFHFTCIILKV*DLLGTRPTLRW Trigger: CCATCTGAGAGTGGGCCTGGTTCCCAACAAATCTCAGACTTTGAGGATAATACATGTGAAATGAAACCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | CATCTCTTCATCAATATGAACCATTCGCATGTGTGCTaGCATCTTCTCTACATCATTGAAGGTGGAACGGCA | + |
Preference number: 6 (lower is better) Translates to: HLFINMNHSHVC*HLLYIIEGGTA Trigger: TGCCGTTCCACCTTCAATGATGTAGAGAAGATGGCAGCACACATGCGAATGGTTCATATTGATGAAGAGATG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | ATTTCACATGTATTATCCTCAAAGTCTGAGATTTGTTaGGAACCAGGCCCACTCTCAGATGGTGAAGCACCA | + |
Preference number: 6 (lower is better) Translates to: ISHVLSSKSEIC*EPGPLSDGEAP Trigger: TGGTGCTTCACCATCTGAGAGTGGGCCTGGTTCCCAACAAATCTCAGACTTTGAGGATAATACATGTGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | CGCTATAGACATTCTCAGGGAAAAGCTCGTTACAGATaGTACAGATTTTCCACTTCTGAGTGGCACAGTGGT | + |
Preference number: 6 (lower is better) Translates to: RYRHSQGKARYR*YRFSTSEWHSG Trigger: ACCACTGTGCCACTCAGAAGTGGAAAATCTGTACAATCTGTAACGAGCTTTTCCCTGAGAATGTCTATAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | TGGACTAGATGCAGAGTGATGGTTGAGGCTGTCATGTaGCTAGTATACACACCAAGGCAATGGATACATTTG | + |
Preference number: 6 (lower is better) Translates to: WTRCRVMVEAVM*LVYTPRQWIHL Trigger: CAAATGTATCCATTGCCTTGGTGTGTATACTAGCAACATGACAGCCTCAACCATCACTCTGCATCTAGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | TTGTACTTTTCACAGTCGCGGACACACTTCTTCCTCTaGTTACTGAAATGGGAGGCAATGTCACTCTTCCAT | + |
Preference number: 6 (lower is better) Translates to: LYFSQSRTHFFL*LLKWEAMSLFH Trigger: ATGGAAGAGTGACATTGCCTCCCATTTCAGTAACAAGAGGAAGAAGTGTGTCCGCGACTGTGAAAAGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | GGTGAAGCACCATCTTTCCACTCAACTACATCATCTTaGTCTACCTCACTATCAGAGGCATCATGCATTAAT | + |
Preference number: 6 (lower is better) Translates to: GEAPSFHSTTSS*STSLSEASCIN Trigger: ATTAATGCATGATGCCTCTGATAGTGAGGTAGACCAAGATGATGTAGTTGAGTGGAAAGATGGTGCTTCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | GATGTGCAAGTGCATCAGATATGGGTCCTTTTAGTATaGAAAAGCAAAGAGGGCAAAGGGTCTTCCCAACAT | + |
Preference number: 6 (lower is better) Translates to: DVQVHQIWVLLV*KSKEGKGSSQH Trigger: ATGTTGGGAAGACCCTTTGCCCTCTTTGCTTTTCAATACTAAAAGGACCCATATCTGATGCACTTGCACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | ACATCATCTTGGTCTACCTCACTATCAGAGGCATCATaGATTAATTTGGCTGGTTCCTCAGTCAAATGGATA | + |
Preference number: 6 (lower is better) Translates to: TSSWSTSLSEAS*INLAGSSVKWI Trigger: TATCCATTTGACTGAGGAACCAGCCAAATTAATGCATGATGCCTCTGATAGTGAGGTAGACCAAGATGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CCA 72 bp | CTTCAAAGACAGGGTCAAAAGGACTCCCGCTTCCATTaGATTCTTCTTCCAAATGTTCAAAACTATCTGAGA | + |
Preference number: 6 (lower is better) Translates to: LQRQGQKDSRFH*ILLPNVQNYLR Trigger: TCTCAGATAGTTTTGAACATTTGGAAGAAGAATCCAATGGAAGCGGGAGTCCTTTTGACCCTGTCTTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | ACATTGGACATCATGTTGACTCCCGTTGAATTTAAGTaGGGCTTTGGTATTGACAATCGGTTTACCATCTGC | + |
Preference number: 6 (lower is better) Translates to: TLDIMLTPVEFK*GFGIDNRFTIC Trigger: GCAGATGGTAAACCGATTGTCAATACCAAAGCCCAACTTAAATTCAACGGGAGTCAACATGATGTCCAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | TTAGGCTCAACTTCAAAGACAGGGTCAAAAGGACTCCCGCTTCCATaGGATTCTTCTTCCAAATGTTCAAAACTATCTGAGAAGCTATCA | + |
Preference number: 6 (lower is better) Translates to: LGSTSKTGSKGLPLP*DSSSKCSKLSEKLS Trigger: TGATAGCTTCTCAGATAGTTTTGAACATTTGGAAGAAGAATCCAATGGAAGCGGGAGTCCTTTTGACCCTGTCTTTGAAGTTGAGCCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | GTTTTTATCTTTGAAAGTGCTGAGGCTGCTACTTGGTaGGCTGGAGTTTGGAGCATGAAATATTTTAATGTG | + |
Preference number: 6 (lower is better) Translates to: VFIFESAEAATW*AGVWSMKYFNV Trigger: CACATTAAAATATTTCATGCTCCAAACTCCAGCGCACCAAGTAGCAGCCTCAGCACTTTCAAAGATAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 72 bp | TGGTCTACCTCACTATCAGAGGCATCATGCATTAATTaGGCTGGTTCCTCAGTCAAATGGATAGTTTCATAT | + |
Preference number: 6 (lower is better) Translates to: WSTSLSEASCIN*AGSSVKWIVSY Trigger: ATATGAAACTATCCATTTGACTGAGGAACCAGCCAAATTAATGCATGATGCCTCTGATAGTGAGGTAGACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | AAACTATCTGAGAAGCTATCATCTTCTTTCCCAAGGTTATGCTTTTaGTCAACAGTCTTGCTAGCATTGACTCTTGAGTCTTTCTCATCG | + |
Preference number: 6 (lower is better) Translates to: KLSEKLSSSFPRLCF*STVLLALTLESFSS Trigger: CGATGAGAAAGACTCAAGAGTCAATGCTAGCAAGACTGTTGACAAAAAGCATAACCTTGGGAAAGAAGATGATAGCTTCTCAGATAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS CAA 90 bp | ACATCATCTTGGTCTACCTCACTATCAGAGGCATCATGCATTAATTaGGCTGGTTCCTCAGTCAAATGGATAGTTTCATATTTTGAACCA | + |
Preference number: 6 (lower is better) Translates to: TSSWSTSLSEASCIN*AGSSVKWIVSYFEP Trigger: TGGTTCAAAATATGAAACTATCCATTTGACTGAGGAACCAGCCAAATTAATGCATGATGCCTCTGATAGTGAGGTAGACCAAGATGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |
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CDS GCA 72 bp | CTATCTGAGAAGCTATCATCTTCTTTCCCAAGGTTATaGTTTTTGTCAACAGTCTTGCTAGCATTGACTCTT | + |
Preference number: 6 (lower is better) Translates to: LSEKLSSSFPRL*FLSTVLLALTL Trigger: AAGAGTCAATGCTAGCAAGACTGTTGACAAAAAGCATAACCTTGGGAAAGAAGATGATAGCTTCTCAGATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057793.11 ENSMUST00000088001.6 |