RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054136

Ensembl transcript IDs: ENSMUST00000066991.7

Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCTCCAGAGAATCGGGCCAAGGTATGGAGCTCAGCTGCAGCTCTaGGATCAGAGCACAGCACTCCAGATGGAGTACCTAGGACCCACC +
Preference number: 1 (lower is better)
Translates to: ELQRIGPRYGAQLQL*DQSTALQMEYLGPT
Trigger: GGTGGGTCCTAGGTACTCCATCTGGAGTGCTGTGCTCTGATCCCAGAGCTGCAGCTGAGCTCCATACCTTGGCCCGATTCTCTGGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
3UTR CCA 90 bp GAGGAATGGCTACAAGCAGGAGCTCCAGAGAATCGGGCCAAGGTATaGAGCTCAGCTGCAGCTCTGGGATCAGAGCACAGCACTCCAGAT +
Preference number: 1 (lower is better)
Translates to: EEWLQAGAPENRAKV*SSAAALGSEHSTPD
Trigger: ATCTGGAGTGCTGTGCTCTGATCCCAGAGCTGCAGCTGAGCTCCATACCTTGGCCCGATTCTCTGGAGCTCCTGCTTGTAGCCATTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
3UTR GCA 72 bp AGCTCCAGAGAATCGGGCCAAGGTATGGAGCTCAGCTaGAGCTCTGGGATCAGAGCACAGCACTCCAGATGG +
Preference number: 3 (lower is better)
Translates to: SSRESGQGMELS*SSGIRAQHSRW
Trigger: CCATCTGGAGTGCTGTGCTCTGATCCCAGAGCTGCAGCTGAGCTCCATACCTTGGCCCGATTCTCTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
3UTR CCA 72 bp CTACAAGCAGGAGCTCCAGAGAATCGGGCCAAGGTATaGAGCTCAGCTGCAGCTCTGGGATCAGAGCACAGC +
Preference number: 3 (lower is better)
Translates to: LQAGAPENRAKV*SSAAALGSEHS
Trigger: GCTGTGCTCTGATCCCAGAGCTGCAGCTGAGCTCCATACCTTGGCCCGATTCTCTGGAGCTCCTGCTTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
3UTR CCA 72 bp AGAATCGGGCCAAGGTATGGAGCTCAGCTGCAGCTCTaGGATCAGAGCACAGCACTCCAGATGGAGTACCTA +
Preference number: 3 (lower is better)
Translates to: RIGPRYGAQLQL*DQSTALQMEYL
Trigger: TAGGTACTCCATCTGGAGTGCTGTGCTCTGATCCCAGAGCTGCAGCTGAGCTCCATACCTTGGCCCGATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
3UTR TCA 72 bp TTTAGGTACACGCCTCCTCGAGTTCTTGGTGGCCTATaGTATTGGCAGCACTTCTTCCAAGCACCTGTACCC +
Preference number: 3 (lower is better)
Translates to: FRYTPPRVLGGL*YWQHFFQAPVP
Trigger: GGGTACAGGTGCTTGGAAGAAGTGCTGCCAATATCATAGGCCACCAAGAACTCGAGGAGGCGTGTACCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
3UTR GCA 72 bp GTGTACACAGTTCTGAGATGCGCAGGCCCCTGTCGGTaGAGATTCTACAGCCTAGATCCACATATCCTCATA +
Preference number: 3 (lower is better)
Translates to: VYTVLRCAGPCR*RFYSLDPHILI
Trigger: TATGAGGATATGTGGATCTAGGCTGTAGAATCTGCACCGACAGGGGCCTGCGCATCTCAGAACTGTGTACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR GCA 90 bp GCTCCAGAGAATCGGGCCAAGGTATGGAGCTCAGCTGCAGCTCTGGGATCAGAGAGTGCCTCAGTCCCTTaGCCAGGCTGCCAGACAACG +
Preference number: 4 (lower is better)
Translates to: APENRAKVWSSAAALGSESASVP*PGCQTT
Trigger: CGTTGTCTGGCAGCCTGGGCAAGGGACTGAGGCACT...CTCTGATCCCAGAGCTGCAGCTGAGCTCCATACCTTGGCCCGATTCTCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR GCA 90 bp GCTGCAGCTCTGGGATCAGAGCACAGCACTCCAGATGGAGTACCTAGGACCCACGCTGGCCGGACAAGCTaGCACAGGCGATGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: AAALGSEHSTPDGVPRTHAGRTS*HRRWLR
Trigger: TCTTAGCCATCGCCTGTGGCAGCTTGTCCGGCCAGC...GTGGGTCCTAGGTACTCCATCTGGAGTGCTGTGCTCTGATCCCAGAGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR CCA 90 bp GCTCCAGAGAATCGGGCCAAGGTATGGAGCTCAGCTGCAGCTCTGGGATCAGAGAACTGTGGGGGCTGCTaGGATCCACAGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: APENRAKVWSSAAALGSENCGGC*DPQELS
Trigger: ACTCAGCTCCTGTGGATCCCAGCAGCCCCCACAGTT...CTCTGATCCCAGAGCTGCAGCTGAGCTCCATACCTTGGCCCGATTCTCTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR TCA 90 bp GTGTACACAGTTCTGAGATGCGCAGGCCCCTGTCGGTGCAGATTCTACAGCCTAAACCGAGGGTTACCGTaGCCATCAGCAACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VYTVLRCAGPCRCRFYSLNRGLP*PSATGP
Trigger: TGGCCCAGTTGCTGATGGTCACGGTAACCCTCGGTT...TAGGCTGTAGAATCTGCACCGACAGGGGCCTGCGCATCTCAGAACTGTGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR GCA 90 bp GCTGCAGCTCTGGGATCAGAGCACAGCACTCCAGATGGAGTACCTAGGACCCACGAAGGGTGTCCAGGCTaGAGGTTACTGGAAGGAATC +
Preference number: 4 (lower is better)
Translates to: AAALGSEHSTPDGVPRTHEGCPG*RLLEGI
Trigger: GATTCCTTCCAGTAACCTGCAGCCTGGACACCCTTC...GTGGGTCCTAGGTACTCCATCTGGAGTGCTGTGCTCTGATCCCAGAGCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR GCA 90 bp GTGGGGTCACAGGGGTCACTCCAGCCTTCTTCCTGCTTATTCATAGGTAGAGATCATAACTGTGGGGGCTaGTGGGATCCACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VGSQGSLQPSSCLFIGRDHNCGG*WDPQEL
Trigger: CAGCTCCTGTGGATCCCAGCAGCCCCCACAGTTATG...ATCTCTACCTATGAATAAGCAGGAAGAAGGCTGGAGTGACCCCTGTGACCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR CCA 90 bp CTACAGCCTAGATCCACATATCCTCATAGGTTTAGGGTATCCAAAGCCACGAGGCCAACCCGCAGGAGCTaGGCATGGGGTCTTCGGGAT +
Preference number: 4 (lower is better)
Translates to: LQPRSTYPHRFRVSKATRPTRRS*AWGLRD
Trigger: ATCCCGAAGACCCCATGCCCAGCTCCTGCGGGTTGG...CCTCGTGGCTTTGGATACCCTAAACCTATGAGGATATGTGGATCTAGGCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR TCA 90 bp TCACTCCAGCCTTCTTCCTGCTTATTCATAGGTAGAGATGCATTTAAGATTCTAGGGATCCACAGGAGCTaGGTCCCGCCGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLQPSSCLFIGRDAFKILGIHRS*VPPASW
Trigger: CCAGCTGGCCGGCGGGACTCAGCTCCTGTGGATCCC...TAGAATCTTAAATGCATCTCTACCTATGAATAAGCAGGAAGAAGGCTGGAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR TCA 90 bp CAGCCTAGATCCACATATCCTCATAGGTTTAGGGTATCCAAAGCCACGAGGAATTTCCAGACTACAGGCTaGAGGGAAGGGTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPRSTYPHRFRVSKATRNFQTTG*REGCPG
Trigger: GCCTGGACACCCTTCCCTTCAGCCTGTAGTCTGGAA...ATTCCTCGTGGCTTTGGATACCCTAAACCTATGAGGATATGTGGATCTAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR CCA 90 bp TCGAGTTCTTGGTGGCCTATGATATTGGCAGCACTTCTTCCAAGCACCTGTACCAGCTGCCACAGGCGATaGCTAAGATTCTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: SSSWWPMILAALLPSTCTSCHRR*LRFWTW
Trigger: CCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCT...GGTACAGGTGCTTGGAAGAAGTGCTGCCAATATCATAGGCCACCAAGAACTCGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
3UTR CAA 72 bp TTGCCCATTTCTTTAGGTACACGCCTCCTCGAGTTCTaGGTGGCCTATGATATTGGCAGCACTTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LPISLGTRLLEF*VAYDIGSTSSK
Trigger: CTTGGAAGAAGTGCTGCCAATATCATAGGCCACCAAGAACTCGAGGAGGCGTGTACCTAAAGAAATGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR GCA 90 bp TCACTCCAGCCTTCTTCCTGCTTATTCATAGGTAGAGATGCATTTAAGATTCTATCTCTGGGTCTGGAGTaGCTCAGTCCCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLQPSSCLFIGRDAFKILSLGLE*LSPLPR
Trigger: CCTGGGCAAGGGACTGAGGCACTCCAGACCCAGAGA...TAGAATCTTAAATGCATCTCTACCTATGAATAAGCAGGAAGAAGGCTGGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR CCA 90 bp TCACTCCAGCCTTCTTCCTGCTTATTCATAGGTAGAGATGCATTTAAGATTCTAGGAAGGAATCTTAGCTaGGGGCTCTCTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLQPSSCLFIGRDAFKILGRNLS*GLSGSG
Trigger: TCCAGACCCAGAGAGCCCCCAGCTAAGATTCCTTCC...TAGAATCTTAAATGCATCTCTACCTATGAATAAGCAGGAAGAAGGCTGGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 90 bp CACAGCCAACCCGCAGGAGCTGGGCATGGGGTCTTCGGGATCCCGTaGGACGCTGGGGACCAGGGTGTCGTGAGCCACCACCCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: HSQPAGAGHGVFGIP*DAGDQGVVSHHPEA
Trigger: TGCCTCAGGGTGGTGGCTCACGACACCCTGGTCCCCAGCGTCCCACGGGATCCCGAAGACCCCATGCCCAGCTCCTGCGGGTTGGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 90 bp ACTTGGCATGTACCCAGTACACAGCCAACCCGCAGGAGCTGGGCATaGGGTCTTCGGGATCCCGTGGGACGCTGGGGACCAGGGTGTCGT +
Preference number: 5 (lower is better)
Translates to: TWHVPSTQPTRRSWA*GLRDPVGRWGPGCR
Trigger: ACGACACCCTGGTCCCCAGCGTCCCACGGGATCCCGAAGACCCCATGCCCAGCTCCTGCGGGTTGGCTGTGTACTGGGTACATGCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS GCA 90 bp AGGTTACTGGAAGGAATCTTAGCTGGGGGCTCTCTGGGTCTGGAGTaGCTCAGTCCCTTGCCCAGGCTGCCAGACAACGTGCCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: RLLEGILAGGSLGLE*LSPLPRLPDNVPGS
Trigger: GCTCCCCGGCACGTTGTCTGGCAGCCTGGGCAAGGGACTGAGGCACTCCAGACCCAGAGAGCCCCCAGCTAAGATTCCTTCCAGTAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS GCA 90 bp GGATCCACAGGAGCTGAGTCCCGCCGGCCAGCTGGCCGGACAAGCTaGCACAGGCGATGGCTAAGATTCTGGACTTGGCATGTACCCAGT +
Preference number: 5 (lower is better)
Translates to: GSTGAESRRPAGRTS*HRRWLRFWTWHVPS
Trigger: ACTGGGTACATGCCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCTTGTCCGGCCAGCTGGCCGGCGGGACTCAGCTCCTGTGGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 90 bp CGGCCAGCTGGCCGGACAAGCTGCCACAGGCGATGGCTAAGATTCTaGACTTGGCATGTACCCAGTACACAGCCAACCCGCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RPAGRTSCHRRWLRF*TWHVPSTQPTRRSW
Trigger: CCAGCTCCTGCGGGTTGGCTGTGTACTGGGTACATGCCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCTTGTCCGGCCAGCTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 90 bp GCTGAGTCCCGCCGGCCAGCTGGCCGGACAAGCTGCCACAGGCGATaGCTAAGATTCTGGACTTGGCATGTACCCAGTACACAGCCAACC +
Preference number: 5 (lower is better)
Translates to: AESRRPAGRTSCHRR*LRFWTWHVPSTQPT
Trigger: GGTTGGCTGTGTACTGGGTACATGCCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCTTGTCCGGCCAGCTGGCCGGCGGGACTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 90 bp GCTGGCCGGACAAGCTGCCACAGGCGATGGCTAAGATTCTGGACTTaGCATGTACCCAGTACACAGCCAACCCGCAGGAGCTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: AGRTSCHRRWLRFWT*HVPSTQPTRRSWAW
Trigger: CCATGCCCAGCTCCTGCGGGTTGGCTGTGTACTGGGTACATGCCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCTTGTCCGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 90 bp AAGGGAAGGGTGTCCAGGCTGCAGGTTACTGGAAGGAATCTTAGCTaGGGGCTCTCTGGGTCTGGAGTGCCTCAGTCCCTTGCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: KGRVSRLQVTGRNLS*GLSGSGVPQSLAQA
Trigger: AGCCTGGGCAAGGGACTGAGGCACTCCAGACCCAGAGAGCCCCCAGCTAAGATTCCTTCCAGTAACCTGCAGCCTGGACACCCTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR CAA 90 bp ACACGCCTCCTCGAGTTCTTGGTGGCCTATGATATTGGCAGCACTTCTTCCAAGGAGTGCCTCAGTCCCTaGCCCAGGCTGCCAGACAAC +
Preference number: 5 (lower is better)
Translates to: TRLLEFLVAYDIGSTSSKECLSP*PRLPDN
Trigger: GTTGTCTGGCAGCCTGGGCAAGGGACTGAGGCACTC...CTTGGAAGAAGTGCTGCCAATATCATAGGCCACCAAGAACTCGAGGAGGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS-3UTR CAA 90 bp TTTAAGATTCTAGCTTTTGCCCATTTCTTTAGGTACACGCCTCCTCGAGTTCTTATAGCAAGGGCCCTGTaGCCCCTTCCCTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: FKILAFAHFFRYTPPRVLIARAL*PLPCGW
Trigger: CCAGCCACAGGGAAGGGGCAACAGGGCCCTTGCTAT...AAGAACTCGAGGAGGCGTGTACCTAAAGAAATGGGCAAAAGCTAGAATCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CAA 72 bp GCTGGGGGCTCTCTGGGTCTGGAGTGCCTCAGTCCCTaGCCCAGGCTGCCAGACAACGTGCCGGGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: AGGSLGLECLSP*PRLPDNVPGSR
Trigger: CCTGCTCCCCGGCACGTTGTCTGGCAGCCTGGGCAAGGGACTGAGGCACTCCAGACCCAGAGAGCCCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS GCA 72 bp CTGGGGGCTCTCTGGGTCTGGAGTGCCTCAGTCCCTTaGCCAGGCTGCCAGACAACGTGCCGGGGAGCAGGT +
Preference number: 6 (lower is better)
Translates to: LGALWVWSASVP*PGCQTTCRGAG
Trigger: ACCTGCTCCCCGGCACGTTGTCTGGCAGCCTGGGCAAGGGACTGAGGCACTCCAGACCCAGAGAGCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS GCA 72 bp CTCTGGGTCTGGAGTGCCTCAGTCCCTTGCCCAGGCTaGCAGACAACGTGCCGGGGAGCAGGTAGAGGAGGC +
Preference number: 6 (lower is better)
Translates to: LWVWSASVPCPG*QTTCRGAGRGG
Trigger: GCCTCCTCTACCTGCTCCCCGGCACGTTGTCTGGCAGCCTGGGCAAGGGACTGAGGCACTCCAGACCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 72 bp GTACCCAGTACACAGCCAACCCGCAGGAGCTGGGCATaGGGTCTTCGGGATCCCGTGGGACGCTGGGGACCA +
Preference number: 6 (lower is better)
Translates to: VPSTQPTRRSWA*GLRDPVGRWGP
Trigger: TGGTCCCCAGCGTCCCACGGGATCCCGAAGACCCCATGCCCAGCTCCTGCGGGTTGGCTGTGTACTGGGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 72 bp TGGCATGTACCCAGTACACAGCCAACCCGCAGGAGCTaGGCATGGGGTCTTCGGGATCCCGTGGGACGCTGG +
Preference number: 6 (lower is better)
Translates to: WHVPSTQPTRRS*AWGLRDPVGRW
Trigger: CCAGCGTCCCACGGGATCCCGAAGACCCCATGCCCAGCTCCTGCGGGTTGGCTGTGTACTGGGTACATGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS TCA 72 bp TCGGGATCCCGTGGGACGCTGGGGACCAGGGTGTCGTaGGCCACCACCCTGAGGCAGATGAACCATAGCAAG +
Preference number: 6 (lower is better)
Translates to: SGSRGTLGTRVS*ATTLRQMNHSK
Trigger: CTTGCTATGGTTCATCTGCCTCAGGGTGGTGGCTCACGACACCCTGGTCCCCAGCGTCCCACGGGATCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS GCA 72 bp GGAGCTGAGTCCCGCCGGCCAGCTGGCCGGACAAGCTaGCACAGGCGATGGCTAAGATTCTGGACTTGGCAT +
Preference number: 6 (lower is better)
Translates to: GAESRRPAGRTS*HRRWLRFWTWH
Trigger: ATGCCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCTTGTCCGGCCAGCTGGCCGGCGGGACTCAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 72 bp CGCCGGCCAGCTGGCCGGACAAGCTGCCACAGGCGATaGCTAAGATTCTGGACTTGGCATGTACCCAGTACA +
Preference number: 6 (lower is better)
Translates to: RRPAGRTSCHRR*LRFWTWHVPST
Trigger: TGTACTGGGTACATGCCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCTTGTCCGGCCAGCTGGCCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CAA 90 bp AGCTGGCCGGACAAGCTGCCACAGGCGATGGCTAAGATTCTGGACTaGGCATGTACCCAGTACACAGCCAACCCGCAGGAGCTGGGCATG +
Preference number: 6 (lower is better)
Translates to: SWPDKLPQAMAKILD*ACTQYTANPQELGM
Trigger: CATGCCCAGCTCCTGCGGGTTGGCTGTGTACTGGGTACATGCCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCTTGTCCGGCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 72 bp GGCCGGACAAGCTGCCACAGGCGATGGCTAAGATTCTaGACTTGGCATGTACCCAGTACACAGCCAACCCGC +
Preference number: 6 (lower is better)
Translates to: GRTSCHRRWLRF*TWHVPSTQPTR
Trigger: GCGGGTTGGCTGTGTACTGGGTACATGCCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCTTGTCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 72 bp GTGTCCAGGCTGCAGGTTACTGGAAGGAATCTTAGCTaGGGGCTCTCTGGGTCTGGAGTGCCTCAGTCCCTT +
Preference number: 6 (lower is better)
Translates to: VSRLQVTGRNLS*GLSGSGVPQSL
Trigger: AAGGGACTGAGGCACTCCAGACCCAGAGAGCCCCCAGCTAAGATTCCTTCCAGTAACCTGCAGCCTGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CCA 72 bp ACAAGCTGCCACAGGCGATGGCTAAGATTCTGGACTTaGCATGTACCCAGTACACAGCCAACCCGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: TSCHRRWLRFWT*HVPSTQPTRRS
Trigger: GCTCCTGCGGGTTGGCTGTGTACTGGGTACATGCCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7
CDS CAA 72 bp GACAAGCTGCCACAGGCGATGGCTAAGATTCTGGACTaGGCATGTACCCAGTACACAGCCAACCCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: DKLPQAMAKILD*ACTQYTANPQE
Trigger: CTCCTGCGGGTTGGCTGTGTACTGGGTACATGCCAAGTCCAGAATCTTAGCCATCGCCTGTGGCAGCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066991.7