RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADM (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030790

Ensembl transcript IDs: ENSMUST00000033054.10

Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCTTATGCCCCGTGAGAAACCAGTTTATGAGCGGGCAAGGCAGTaGCTCAGACCCCTGCCCGGAGAGTATCAGCCTGTAAGTCTCGGT +
Preference number: 1 (lower is better)
Translates to: RLMPREKPVYERARQ*LRPLPGEYQPVSLG
Trigger: ACCGAGACTTACAGGCTGATACTCTCCGGGCAGGGGTCTGAGCCACTGCCTTGCCCGCTCATAAACTGGTTTCTCACGGGGCATAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR CCA 90 bp TACCTTTGGCTGGACAACAAGCATTGCACGTTCCTCGCTAGGTTTTaGAAAGTTCAAGTAGTAATGAGGCTTATGCCCCGTGAGAAACCA +
Preference number: 1 (lower is better)
Translates to: YLWLDNKHCTFLARF*KVQVVMRLMPREKP
Trigger: TGGTTTCTCACGGGGCATAAGCCTCATTACTACTTGAACTTTCCAAAACCTAGCGAGGAACGTGCAATGCTTGTTGTCCAGCCAAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR CCA 90 bp AAAACCTTGACAGCAACAAACTTAAATACTATAGTTACCTTTGGCTaGACAACAAGCATTGCACGTTCCTCGCTAGGTTTTGGAAAGTTC +
Preference number: 1 (lower is better)
Translates to: KTLTATNLNTIVTFG*TTSIARSSLGFGKF
Trigger: GAACTTTCCAAAACCTAGCGAGGAACGTGCAATGCTTGTTGTCCAGCCAAAGGTAACTATAGTATTTAAGTTTGTTGCTGTCAAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR GCA 90 bp AACAAACTTAAATACTATAGTTACCTTTGGCTGGACAACAAGCATTaGACGTTCCTCGCTAGGTTTTGGAAAGTTCAAGTAGTAATGAGG +
Preference number: 1 (lower is better)
Translates to: NKLKYYSYLWLDNKH*TFLARFWKVQVVMR
Trigger: CCTCATTACTACTTGAACTTTCCAAAACCTAGCGAGGAACGTGCAATGCTTGTTGTCCAGCCAAAGGTAACTATAGTATTTAAGTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR-3UTR CCA 90 bp GCAAGGCAGTGGCTCAGACCCCTGCCCGGAGAGTATCAGCCTGTAAGTCTCGGTGGCATGAGCCTGGCTTaGTCTTGGGTTCCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: ARQWLRPLPGEYQPVSLGGMSLA*SWVPLP
Trigger: AGGCAGAGGAACCCAAGACCAAGCCAGGCTCATGCC...ACCGAGACTTACAGGCTGATACTCTCCGGGCAGGGGTCTGAGCCACTGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR-3UTR CCA 90 bp CCACAGGCGATAATCAGGCGCTCTCCACCTTACACACACACACACACACACACAGAGCGGGCAAGGCAGTaGCTCAGACCCCTGCCCGGA +
Preference number: 2 (lower is better)
Translates to: PQAIIRRSPPYTHTHTHTERARQ*LRPLPG
Trigger: TCCGGGCAGGGGTCTGAGCCACTGCCTTGCCCGCTC...TGTGTGTGTGTGTGTGTGTGTGTAAGGTGGAGAGCGCCTGATTATCGCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR CAA 90 bp TATCAGCCTGTAAGTCTCGGTTTCTGGCATGAGCCTGGCTTGGTCTaGGGTTCCTCTGCCTCCCCTAGGGGCAGCCAGGCAGATCTCTGC +
Preference number: 2 (lower is better)
Translates to: YQPVSLGFWHEPGLV*GSSASPRGSQADLC
Trigger: GCAGAGATCTGCCTGGCTGCCCCTAGGGGAGGCAGAGGAACCCAAGACCAAGCCAGGCTCATGCCAGAAACCGAGACTTACAGGCTGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR CAA 90 bp GGAGAGTATCAGCCTGTAAGTCTCGGTTTCTGGCATGAGCCTGGCTaGGTCTTGGGTTCCTCTGCCTCCCCTAGGGGCAGCCAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: GEYQPVSLGFWHEPG*VLGSSASPRGSQAD
Trigger: ATCTGCCTGGCTGCCCCTAGGGGAGGCAGAGGAACCCAAGACCAAGCCAGGCTCATGCCAGAAACCGAGACTTACAGGCTGATACTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR CAA 90 bp ACACACACACACACACACACACACGGAACCAAACAACCTTACACCTaGCTGAGACATTCACGTCTTAAAATAGGGGAAGGTGACAATATA +
Preference number: 2 (lower is better)
Translates to: THTHTHTHGTKQPYT*LRHSRLKIGEGDNI
Trigger: TATATTGTCACCTTCCCCTATTTTAAGACGTGAATGTCTCAGCAAGGTGTAAGGTTGTTTGGTTCCGTGTGTGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR-3UTR CCA 90 bp ACACACACACACACACACGGAACCAAACAACCTTACACCTTGCTGAGACATTCATACTATAGTTACCTTTaGCTGGACAACAAGCATTGC +
Preference number: 2 (lower is better)
Translates to: THTHTHGTKQPYTLLRHSYYSYL*LDNKHC
Trigger: GCAATGCTTGTTGTCCAGCCAAAGGTAACTATAGTA...TGAATGTCTCAGCAAGGTGTAAGGTTGTTTGGTTCCGTGTGTGTGTGTGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR-3UTR CAA 90 bp GCGCTCTCCACCTTACACACACACACACACACACACACACACACACACACACACAAACAACCTTACACCTaGCTGAGACATTCACGTCTT +
Preference number: 3 (lower is better)
Translates to: ALSTLHTHTHTHTHTHTHKQPYT*LRHSRL
Trigger: AAGACGTGAATGTCTCAGCAAGGTGTAAGGTTGTTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGGTGGAGAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR CCA 72 bp CTGGACAACAAGCATTGCACGTTCCTCGCTAGGTTTTaGAAAGTTCAAGTAGTAATGAGGCTTATGCCCCGT +
Preference number: 3 (lower is better)
Translates to: LDNKHCTFLARF*KVQVVMRLMPR
Trigger: ACGGGGCATAAGCCTCATTACTACTTGAACTTTCCAAAACCTAGCGAGGAACGTGCAATGCTTGTTGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR GCA 72 bp AAATACTATAGTTACCTTTGGCTGGACAACAAGCATTaGACGTTCCTCGCTAGGTTTTGGAAAGTTCAAGTA +
Preference number: 3 (lower is better)
Translates to: KYYSYLWLDNKH*TFLARFWKVQV
Trigger: TACTTGAACTTTCCAAAACCTAGCGAGGAACGTGCAATGCTTGTTGTCCAGCCAAAGGTAACTATAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS-3UTR CCA 90 bp GCAAGGCAGTGGCTCAGACCCCTGCCCGGAGAGTATCAGCCTGTAAGTCTCGGTGTGCGCCCAGGGGCCTaGGGCTGTGTGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ARQWLRPLPGEYQPVSLGVRPGA*GCVCLL
Trigger: GAGCAGACACACACAGCCCCAGGCCCCTGGGCGCAC...ACCGAGACTTACAGGCTGATACTCTCCGGGCAGGGGTCTGAGCCACTGCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS-3UTR TCA 90 bp AGGGGCAGCCAGGCAGATCTCTGCAGGATTGTCTCAGTCCGCCCCGGTGCGAAGATGTGGGCTTCGCTCTaGTTGCTGGCTTGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: RGSQADLCRIVSVRPGAKMWASL*LLACRG
Trigger: CCCCCTACAAGCCAGCAATCAGAGCGAAGCCCACAT...CTTCGCACCGGGGCGGACTGAGACAATCCTGCAGAGATCTGCCTGGCTGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS-3UTR GCA 90 bp GCTTGGTCTTGGGTTCCTCTGCCTCCCCTAGGGGCAGCCAGGCAGATCTCTGCAGGGCTTCGCTCTGATTaGTGGCTTGTAGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AWSWVPLPPLGAARQISAGLRSD*WLVGGQ
Trigger: CTGGCCCCCTACAAGCCAGCAATCAGAGCGAAGCCC...TGCAGAGATCTGCCTGGCTGCCCCTAGGGGAGGCAGAGGAACCCAAGACCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS-3UTR CCA 90 bp GCAAGGCAGTGGCTCAGACCCCTGCCCGGAGAGTATCAGCCTGTAAGTCTCGGTCTGCGAAGGAGTATCTaGCCCTGCAGTGTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: ARQWLRPLPGEYQPVSLGLRRSI*PCSVRA
Trigger: GGCGCGGACACTGCAGGGCCAGATACTCCTTCGCAG...ACCGAGACTTACAGGCTGATACTCTCCGGGCAGGGGTCTGAGCCACTGCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS-3UTR GCA 90 bp GCAGTGGCTCAGACCCCTGCCCGGAGAGTATCAGCCTGTAAGTCTCGGTTTCTGAAGAGTCTGGAGATGTaGGCCCAGGGGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: AVAQTPARRVSACKSRFLKSLEM*AQGPGA
Trigger: AGCCCCAGGCCCCTGGGCGCACATCTCCAGACTCTT...CAGAAACCGAGACTTACAGGCTGATACTCTCCGGGCAGGGGTCTGAGCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS-3UTR CCA 90 bp GCAGCCAGGCAGATCTCTGCAGGATTGTCTCAGTCCGCCCCGGTGCGAAGTTCTGTGTGTGTCTGCTCCTaGGAGGACTCCACAGTCCGG +
Preference number: 4 (lower is better)
Translates to: AARQISAGLSQSAPVRSSVCVCS*EDSTVR
Trigger: CCGGACTGTGGAGTCCTCCCAGGAGCAGACACACAC...AGAACTTCGCACCGGGGCGGACTGAGACAATCCTGCAGAGATCTGCCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR CAA 72 bp GTAAGTCTCGGTTTCTGGCATGAGCCTGGCTTGGTCTaGGGTTCCTCTGCCTCCCCTAGGGGCAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VSLGFWHEPGLV*GSSASPRGSQA
Trigger: TGCCTGGCTGCCCCTAGGGGAGGCAGAGGAACCCAAGACCAAGCCAGGCTCATGCCAGAAACCGAGACTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS-3UTR TCA 90 bp AGGGGCAGCCAGGCAGATCTCTGCAGGATTGTCTCAGTCCGCCCCGGTGCGAAGTGGTGGGCCAATTTCTaGAATGTGCAGGTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: RGSQADLCRIVSVRPGAKWWANF*NVQVPK
Trigger: CTTCGGGACCTGCACATTTCAGAAATTGGCCCACCA...CTTCGCACCGGGGCGGACTGAGACAATCCTGCAGAGATCTGCCTGGCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS-3UTR GCA 90 bp GCTTGGTCTTGGGTTCCTCTGCCTCCCCTAGGGGCAGCCAGGCAGATCTCTGCACACTTCTTTCGGAACTaGGAAGGAGTATCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AWSWVPLPPLGAARQISAHFFRN*EGVSGP
Trigger: AGGGCCAGATACTCCTTCGCAGTTCCGAAAGAAGTG...TGCAGAGATCTGCCTGGCTGCCCCTAGGGGAGGCAGAGGAACCCAAGACCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
3UTR CAA 72 bp CACACACACACACACGGAACCAAACAACCTTACACCTaGCTGAGACATTCACGTCTTAAAATAGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHGTKQPYT*LRHSRLKIGEG
Trigger: ACCTTCCCCTATTTTAAGACGTGAATGTCTCAGCAAGGTGTAAGGTTGTTTGGTTCCGTGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS GCA 90 bp AAGAGTCTGGAGATGTGCGCCCAGGGGCCTGGGGCTGTGTGTGTCTaGTCCTGGGAGGACTCCACAGTCCGGGACCGGAGGACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: KSLEMCAQGPGAVCV*SWEDSTVRDRRTSS
Trigger: GCTGGAGGTCCTCCGGTCCCGGACTGTGGAGTCCTCCCAGGAGCAGACACACACAGCCCCAGGCCCCTGGGCGCACATCTCCAGACTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS TCA 90 bp CCTCCAGCAGGGAACGCCGGCGCCGGCGGCCATAGCCTTGAGGGCTaGTCTTGTTTCTGGGAGCCATGCCGTCCTTGTCTTTGTCTGTTA +
Preference number: 5 (lower is better)
Translates to: PPAGNAGAGGHSLEG*SCFWEPCRPCLCLL
Trigger: TAACAGACAAAGACAAGGACGGCATGGCTCCCAGAAACAAGATCAGCCCTCAAGGCTATGGCCGCCGGCGCCGGCGTTCCCTGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS TCA 90 bp ATCCATTGCTGCGGGAACCCTGGTTCATGCTCTGGCGGTAGCGTTTaGCACGAATGTGGGCTTCGCTCTGATTGCTGGCTTGTAGGGGGC +
Preference number: 5 (lower is better)
Translates to: IHCCGNPGSCSGGSV*HECGLRSDCWLVGG
Trigger: GCCCCCTACAAGCCAGCAATCAGAGCGAAGCCCACATTCGTGTCAAACGCTACCGCCAGAGCATGAACCAGGGTTCCCGCAGCAATGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS GCA 90 bp CTCTTCCCACGACTTAGCGCCCACTTATTCCACTTCTTTCGGAACTaGGAAGGAGTATCTGGCCCTGCAGTGTCCGCGCCTAGGAAAGCG +
Preference number: 5 (lower is better)
Translates to: LFPRLSAHLFHFFRN*EGVSGPAVSAPRKA
Trigger: CGCTTTCCTAGGCGCGGACACTGCAGGGCCAGATACTCCTTCGCAGTTCCGAAAGAAGTGGAATAAGTGGGCGCTAAGTCGTGGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS GCA 90 bp CTTTGTCTGTTAGCTGGTAGATCTGGTGGGCCAATTTCTGAAATGTaGAGGTCCCGAAGCGGCATCCATTGCTGCGGGAACCCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: LCLLAGRSGGPISEM*RSRSGIHCCGNPGS
Trigger: TGAACCAGGGTTCCCGCAGCAATGGATGCCGCTTCGGGACCTGCACATTTCAGAAATTGGCCCACCAGATCTACCAGCTAACAGACAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS-3UTR CAA 90 bp GACAACAAGCATTGCACGTTCCTCGCTAGGTTTTGGAAAGTTCAAGTAGTAATGCCGGCGGCCATAGCCTaGAGGGCTGATCTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: DNKHCTFLARFWKVQVVMPAAIA*RADLVS
Trigger: AGAAACAAGATCAGCCCTCAAGGCTATGGCCGCCGG...CATTACTACTTGAACTTTCCAAAACCTAGCGAGGAACGTGCAATGCTTGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS GCA 72 bp GAGATGTGCGCCCAGGGGCCTGGGGCTGTGTGTGTCTaGTCCTGGGAGGACTCCACAGTCCGGGACCGGAGG +
Preference number: 6 (lower is better)
Translates to: EMCAQGPGAVCV*SWEDSTVRDRR
Trigger: CCTCCGGTCCCGGACTGTGGAGTCCTCCCAGGAGCAGACACACACAGCCCCAGGCCCCTGGGCGCACATCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS CAA 90 bp CCGGAGGACCTCCAGCAGGGAACGCCGGCGCCGGCGGCCATAGCCTaGAGGGCTGATCTTGTTTCTGGGAGCCATGCCGTCCTTGTCTTT +
Preference number: 6 (lower is better)
Translates to: PEDLQQGTPAPAAIA*RADLVSGSHAVLVF
Trigger: AAAGACAAGGACGGCATGGCTCCCAGAAACAAGATCAGCCCTCAAGGCTATGGCCGCCGGCGCCGGCGTTCCCTGCTGGAGGTCCTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS TCA 72 bp GGGAACGCCGGCGCCGGCGGCCATAGCCTTGAGGGCTaGTCTTGTTTCTGGGAGCCATGCCGTCCTTGTCTT +
Preference number: 6 (lower is better)
Translates to: GNAGAGGHSLEG*SCFWEPCRPCL
Trigger: AAGACAAGGACGGCATGGCTCCCAGAAACAAGATCAGCCCTCAAGGCTATGGCCGCCGGCGCCGGCGTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS CCA 72 bp TATCCTAAAGAGTCTGGAGATGTGCGCCCAGGGGCCTaGGGCTGTGTGTGTCTGCTCCTGGGAGGACTCCAC +
Preference number: 6 (lower is better)
Translates to: YPKESGDVRPGA*GCVCLLLGGLH
Trigger: GTGGAGTCCTCCCAGGAGCAGACACACACAGCCCCAGGCCCCTGGGCGCACATCTCCAGACTCTTTAGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS GCA 72 bp TCTGAAATGTGCAGGTCCCGAAGCGGCATCCATTGCTaGGGGAACCCTGGTTCATGCTCTGGCGGTAGCGTT +
Preference number: 6 (lower is better)
Translates to: SEMCRSRSGIHC*GNPGSCSGGSV
Trigger: AACGCTACCGCCAGAGCATGAACCAGGGTTCCCGCAGCAATGGATGCCGCTTCGGGACCTGCACATTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS TCA 72 bp TGCGGGAACCCTGGTTCATGCTCTGGCGGTAGCGTTTaGCACGAATGTGGGCTTCGCTCTGATTGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: CGNPGSCSGGSV*HECGLRSDCWL
Trigger: AAGCCAGCAATCAGAGCGAAGCCCACATTCGTGTCAAACGCTACCGCCAGAGCATGAACCAGGGTTCCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS GCA 72 bp CGACTTAGCGCCCACTTATTCCACTTCTTTCGGAACTaGGAAGGAGTATCTGGCCCTGCAGTGTCCGCGCCT +
Preference number: 6 (lower is better)
Translates to: RLSAHLFHFFRN*EGVSGPAVSAP
Trigger: AGGCGCGGACACTGCAGGGCCAGATACTCCTTCGCAGTTCCGAAAGAAGTGGAATAAGTGGGCGCTAAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS GCA 72 bp ATTTCTGAAATGTGCAGGTCCCGAAGCGGCATCCATTaGTGCGGGAACCCTGGTTCATGCTCTGGCGGTAGC +
Preference number: 6 (lower is better)
Translates to: ISEMCRSRSGIH*CGNPGSCSGGS
Trigger: GCTACCGCCAGAGCATGAACCAGGGTTCCCGCAGCAATGGATGCCGCTTCGGGACCTGCACATTTCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS GCA 72 bp TTAGCTGGTAGATCTGGTGGGCCAATTTCTGAAATGTaGAGGTCCCGAAGCGGCATCCATTGCTGCGGGAAC +
Preference number: 6 (lower is better)
Translates to: LAGRSGGPISEM*RSRSGIHCCGN
Trigger: GTTCCCGCAGCAATGGATGCCGCTTCGGGACCTGCACATTTCAGAAATTGGCCCACCAGATCTACCAGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10
CDS CCA 72 bp GTTGTGTTCTGCTCGTCCAGGAATGGATCAAGAGTCTaGGTAGGAACTGTCGTCTCATCAGCGAGTCCCGTA +
Preference number: 6 (lower is better)
Translates to: VVFCSSRNGSRV*VGTVVSSASPV
Trigger: TACGGGACTCGCTGATGAGACGACAGTTCCTACCCAGACTCTTGATCCATTCCTGGACGAGCAGAACACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033054.10