Pregenerated sensors for ADIPOR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026457Ensembl transcript IDs: ENSMUST00000027727.15, ENSMUST00000112237.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGGGAGGTGGATGCAGGGGGATCTCTGAGAGTTTGAGGCCAGCCTaGTCTACAGGGTCAGTTCTAAGACAGCCAATGCTACACAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LGGGCRGISESLRPA*STGSVLRQPMLHRD Trigger: GTCTCTGTGTAGCATTGGCTGTCTTAGAACTGACCCTGTAGACCAGGCTGGCCTCAAACTCTCAGAGATCCCCCTGCATCCACCTCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR TCA 90 bp | GGAATGCACATGGGAAGTGTACTGCCCGGACGGAGGCTGGGACAGTaGGCTGACATGTCACTGGTACTGACTTCTCTAAGAGATTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: GMHMGSVLPGRRLGQ*ADMSLVLTSLRDFF Trigger: GAAGAAATCTCTTAGAGAAGTCAGTACCAGTGACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTCCCATGTGCATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR TCA 90 bp | GCACATGGGAAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTaGCATGTCACTGGTACTGACTTCTCTAAGAGATTTCTTCTAGAA | + |
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Preference number: 1 (lower is better) Translates to: AHGKCTARTEAGTVS*HVTGTDFSKRFLLE Trigger: TTCTAGAAGAAATCTCTTAGAGAAGTCAGTACCAGTGACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTCCCATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR CCA 90 bp | GTGATTTTCCTTTCTGAGACAGTCTCATGTATATACCAATCTCCTTaGTATTGGTGTTATAGGCATGACCTACCATTCCTGGTTTATCTG | + |
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Preference number: 1 (lower is better) Translates to: VIFLSETVSCIYQSP*YWCYRHDLPFLVYL Trigger: CAGATAAACCAGGAATGGTAGGTCATGCCTATAACACCAATACCAAGGAGATTGGTATATACATGAGACTGTCTCAGAAAGGAAAATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR TCA 90 bp | CTCAGGAGTTGTGTGCAAACAGTGGAGACAACACAGTTAACTCTTTaGATGCCAAGCGTTGTCTATACTTTCTTTTATTATCACCATAGT | + |
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Preference number: 1 (lower is better) Translates to: LRSCVQTVETTQLTL*MPSVVYTFFYYHHS Trigger: ACTATGGTGATAATAAAAGAAAGTATAGACAACGCTTGGCATTCAAAGAGTTAACTGTGTTGTCTCCACTGTTTGCACACAACTCCTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR CCA 90 bp | TTCCTTTCTGAGACAGTCTCATGTATATACCAATCTCCTTGGTATTaGTGTTATAGGCATGACCTACCATTCCTGGTTTATCTGATAATG | + |
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Preference number: 1 (lower is better) Translates to: FLSETVSCIYQSPWY*CYRHDLPFLVYLIM Trigger: CATTATCAGATAAACCAGGAATGGTAGGTCATGCCTATAACACCAATACCAAGGAGATTGGTATATACATGAGACTGTCTCAGAAAGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGAGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCCTGAGCCCTCAGCTCTaGGAGCACAATCACATGCCG | + |
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Preference number: 2 (lower is better) Translates to: GGGAHSSQIILGVQFQVTLSPQL*EHNHMP Trigger: CGGCATGTGATTGTGCTCTCAGAGCTGAGGGCTCAG...GGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGGGCAGACCGATAGGGTaGCAGGCTCCACCCCTGATG | + |
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Preference number: 2 (lower is better) Translates to: RGPFQPNHPWSPVSGDLKGRPIG*QAPPLM Trigger: CATCAGGGGTGGAGCCTGCCACCCTATCGGTCTGCC...CTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCAAACCTGATCAGCCAGATTTCAGGCCGAGGAGGGGAGGTTACACTCAAGAGTGATCTACCTGCCTaGGCCCTCAGCTCTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: QSNLISQISGRGGEVTLKSDLPA*ALSSES Trigger: GCTCTCAGAGCTGAGGGCTCAGGCAGGTAGATCACT...CTTGAGTGTAACCTCCCCTCCTCGGCCTGAAATCTGGCTGATCAGGTTTGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGATGCTCTCCTAGCACTAACAGTCAAACCTGATCAGCCAGATTTCAGGCCGCTGCGTAGGGAGCAGTaGTCTACCTGCCTGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: PDALLALTVKPDQPDFRPLRREQ*STCLSP Trigger: AGGGCTCAGGCAGGTAGATCACTGCTCCCTACGCAG...CGGCCTGAAATCTGGCTGATCAGGTTTGACTGTTAGTGCTAGGAGAGCATCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTCGGCTCTGCGTAGGGAGCAGTaGTCTACCTGCCTGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: PFQPNHPWSPVSGDLKSALRREQ*STCLSP Trigger: AGGGCTCAGGCAGGTAGATCACTGCTCCCTACGCAG...AGCCGACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCAAACCTGATCAGCCAGATTTCAGGCCGAGGAGGGGAGGTTACACTCAAGCACTTGGGAGGTGGATaGAGGGGGATCTCTGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QSNLISQISGRGGEVTLKHLGGG*RGISES Trigger: ACTCTCAGAGATCCCCCTGCATCCACCTCCCAAGTG...CTTGAGTGTAACCTCCCCTCCTCGGCCTGAAATCTGGCTGATCAGGTTTGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGATGCTCTCCTAGCACTAACAGTCAAACCTGATCAGCCAGATTTCAGGCCGACATGCCGCCTTCCCTaGTTTCTCTCCAGCGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PDALLALTVKPDQPDFRPTCRLP*FLSSEQ Trigger: CTGCTCGCTGGAGAGAAACCAGGGAAGGCGGCATGT...CGGCCTGAAATCTGGCTGATCAGGTTTGACTGTTAGTGCTAGGAGAGCATCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTCGGCTCCCACGTCCTATCTGTaGAGGAGCAGCAGTTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: PFQPNHPWSPVSGDLKSAPTSYL*RSSSCL Trigger: AAGGCAACTGCTGCTCCTTCACAGATAGGACGTGGG...AGCCGACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR CCA 90 bp | TGCACATGGGAAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTGACATGTATTTTTAAAAGCACTTaGGAAGTCCCTCCTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: CTWEVYCPDGGWDSELTCIFKST*EVPPPP Trigger: GGGTGGAGGAGGGACTTCCCAAGTGCTTTTAAAAAT...ACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTCCCATGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTGGTAAAATCTCAACATaGGCTCCCACGTCCTATCTG | + |
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Preference number: 2 (lower is better) Translates to: GAHSSQIILGVQFQVTSSGKIST*APTSYL Trigger: CAGATAGGACGTGGGAGCTCATGTTGAGATTTTACC...ACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | CCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTCGGCTCTGGACGTACTTCCATaGTTAGCCGGGCTACATCAA | + |
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Preference number: 2 (lower is better) Translates to: PFQPNHPWSPVSGDLKSALDVLP*LAGLHQ Trigger: TTGATGTAGCCCGGCTAATCATGGAAGTACGTCCAG...AGCCGACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGACTATGCAGGTTTGCTaGGTAGGGAGCAGTGATCTA | + |
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Preference number: 2 (lower is better) Translates to: RGPFQPNHPWSPVSGDLKTMQVC*VGSSDL Trigger: TAGATCACTGCTCCCTACGCAGCAAACCTGCATAGT...CTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGATGCTCTCCTAGCACTAACAGTCAAACCTGATCAGCCAGATTTCAGGCCGTCAACTATGCAGGTTTaGTGCGTAGGGAGCAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: PDALLALTVKPDQPDFRPSTMQV*CVGSSD Trigger: ATCACTGCTCCCTACGCAGCAAACCTGCATAGTTGA...CGGCCTGAAATCTGGCTGATCAGGTTTGACTGTTAGTGCTAGGAGAGCATCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCAAACCTGATCAGCCAGATTTCAGGCCGAGGAGGGGAGGTTACACTCAAGATTTTTAAAAGCACTTaGGAAGTCCCTCCTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: QSNLISQISGRGGEVTLKIFKST*EVPPPP Trigger: GGGTGGAGGAGGGACTTCCCAAGTGCTTTTAAAAAT...CTTGAGTGTAACCTCCCCTCCTCGGCCTGAAATCTGGCTGATCAGGTTTGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAAACCTCGAGCCTCAGGAGTTGTGTGCAAACAGTGGAGACAACACAGTTGGTAAAATCTCAACATaGGCTCCCACGTCCTATCTG | + |
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Preference number: 2 (lower is better) Translates to: LRNLEPQELCANSGDNTVGKIST*APTSYL Trigger: CAGATAGGACGTGGGAGCTCATGTTGAGATTTTACC...AACTGTGTTGTCTCCACTGTTTGCACACAACTCCTGAGGCTCGAGGTTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTACTATGGTAACACAGTaGTTTTCCTTTCTGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: GAHSSQIILGVQFQVTSSTMVTQ*FSFLRQ Trigger: CTGTCTCAGAAAGGAAAATCACTGTGTTACCATAGT...ACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | CATGCCTTTAATCCCAACACTTGGGAGGTGGATGCAGGGGGATCTCTGAGAGTTACACAGTTAACTCTTTaGATGCCAAGCGTTGTCTAT | + |
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Preference number: 2 (lower is better) Translates to: HAFNPNTWEVDAGGSLRVTQLTL*MPSVVY Trigger: ATAGACAACGCTTGGCATTCAAAGAGTTAACTGTGT...AACTCTCAGAGATCCCCCTGCATCCACCTCCCAAGTGTTGGGATTAAAGGCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATATACCAATCTCCTTGGTATTGGTGTTATAGGCATGACCTACCATTCCTGGCCTCAGGAGTTGTGTaGAAACAGTGGAGACAACAC | + |
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Preference number: 2 (lower is better) Translates to: CIYQSPWYWCYRHDLPFLASGVV*KQWRQH Trigger: GTGTTGTCTCCACTGTTTGCACACAACTCCTGAGGC...CAGGAATGGTAGGTCATGCCTATAACACCAATACCAAGGAGATTGGTATATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | AGACAGCCAATGCTACACAGAGACCATGTCTCGAAAAACCAAAAATACTATGGTACACACTCTACCATCTaGGGGACACTAATCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: RQPMLHRDHVSKNQKYYGTHSTI*GTLIRS Trigger: ACTCCTGATTAGTGTCCCTCAGATGGTAGAGTGTGT...ACCATAGTATTTTTGGTTTTTCGAGACATGGTCTCTGTGTAGCATTGGCTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR TCA 90 bp | TGTATATACCAATCTCCTTGGTATTGGTGTTATAGGCATGACCTACCATTCCTGACACACTCTACCATCTaGGGGACACTAATCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: CIYQSPWYWCYRHDLPFLTHSTI*GTLIRS Trigger: ACTCCTGATTAGTGTCCCTCAGATGGTAGAGTGTGT...CAGGAATGGTAGGTCATGCCTATAACACCAATACCAAGGAGATTGGTATATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR GCA 90 bp | TTGATCAAGGTTCAATTTTACTATTCAGAGACACTGGGTTATGAAGAAGGGGGATATACTAGGCAGTGGTaGCACATGCCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: LIKVQFYYSETLGYEEGGYTRQW*HMPLIP Trigger: TGGGATTAAAGGCATGTGGCACCACTGCCTAGTATA...TCCCCCTTCTTCATAACCCAGTGTCTCTGAATAGTAAAATTGAACCTTGATCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027727.15 |
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| 3UTR GCA 72 bp | CGAGGTGACTGCCGGGAATGCACATGGGAAGTGTACTaGCCGGACGGAGGCTGGGACAGTGAGCTGACATGT | + |
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Preference number: 3 (lower is better) Translates to: RGDCRECTWEVY*PDGGWDSELTC Trigger: ACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTCCCATGTGCATTCCCGGCAGTCACCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGGAGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCGGGATCTCTGAGAGTTaGAGGCCAGCCTGGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: GGGAHSSQIILGVQFQVTGISES*RPAWST Trigger: TGTAGACCAGGCTGGCCTCAAACTCTCAGAGATCCC...GGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR TCA 72 bp | CCTATCTGTGAAGGAGCAGCAGTTGCCTTGCCGAGGTaGCTGCCGGGAATGCACATGGGAAGTGTACTGCCC | + |
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Preference number: 3 (lower is better) Translates to: PICEGAAVALPR*LPGMHMGSVLP Trigger: GGGCAGTACACTTCCCATGTGCATTCCCGGCAGTCACCTCGGCAAGGCAACTGCTGCTCCTTCACAGATAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR TCA 72 bp | CAGGTTTGCTGCGTAGGGAGCAGTGATCTACCTGCCTaGGCCCTCAGCTCTGAGAGCACAATCACATGCCGC | + |
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Preference number: 3 (lower is better) Translates to: QVCCVGSSDLPA*ALSSESTITCR Trigger: GCGGCATGTGATTGTGCTCTCAGAGCTGAGGGCTCAGGCAGGTAGATCACTGCTCCCTACGCAGCAAACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTACGAAACCCAGGGCTTaGTGGGTGCTAGGCACACAC | + |
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Preference number: 3 (lower is better) Translates to: GAHSSQIILGVQFQVTSSTKPRA*WVLGTH Trigger: GTGTGTGCCTAGCACCCACAAAGCCCTGGGTTTCGT...ACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTGGGATCTCTGAGAGTTaGAGGCCAGCCTGGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: GAHSSQIILGVQFQVTSSGISES*RPAWST Trigger: TGTAGACCAGGCTGGCCTCAAACTCTCAGAGATCCC...ACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR TCA 72 bp | ATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTaGCCTCAAGTCGGCTCCGGAACCGCTAGAAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: IPAKSSLESSFR*PQVGSGTARRQ Trigger: CTGCCTTCTAGCGGTTCCGGAGCCGACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR CCA 72 bp | GGATGCAGGGGGATCTCTGAGAGTTTGAGGCCAGCCTaGTCTACAGGGTCAGTTCTAAGACAGCCAATGCTA | + |
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Preference number: 3 (lower is better) Translates to: GCRGISESLRPA*STGSVLRQPML Trigger: TAGCATTGGCTGTCTTAGAACTGACCCTGTAGACCAGGCTGGCCTCAAACTCTCAGAGATCCCCCTGCATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGGAGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCAACACAGTTAACTCTTaGAATGCCAAGCGTTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: GGGAHSSQIILGVQFQVTNTVNS*NAKRCL Trigger: TAGACAACGCTTGGCATTCAAAGAGTTAACTGTGTT...GGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR TCA 72 bp | AAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTaGCATGTCACTGGTACTGACTTCTCTAAGAGATTT | + |
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Preference number: 3 (lower is better) Translates to: KCTARTEAGTVS*HVTGTDFSKRF Trigger: AAATCTCTTAGAGAAGTCAGTACCAGTGACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR TCA 72 bp | AGGGCTTTGTGGGTGCTAGGCACACACTCTACCATCTaGGGGACACTAATCAGGAGTCTGTATGGTACTAAG | + |
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Preference number: 3 (lower is better) Translates to: RALWVLGTHSTI*GTLIRSLYGTK Trigger: CTTAGTACCATACAGACTCCTGATTAGTGTCCCTCAGATGGTAGAGTGTGTGCCTAGCACCCACAAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR CCA 72 bp | TCAACACTGGAGACTCTCATAGTCTATACTAGGCAGTaGTGCCACATGCCTTTAATCCCAACACTTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: STLETLIVYTRQ*CHMPLIPTLGR Trigger: CCTCCCAAGTGTTGGGATTAAAGGCATGTGGCACCACTGCCTAGTATAGACTATGAGAGTCTCCAGTGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR TCA 72 bp | CCTTCCCTGGTTTCTCTCCAGCGAGCAGTAACTGAATaGTTCTCTAGCACCAACAAGGTAGTGTTACTAAAA | + |
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Preference number: 3 (lower is better) Translates to: PSLVSLQRAVTE*FSSTNKVVLLK Trigger: TTTTAGTAACACTACCTTGTTGGTGCTAGAGAATCATTCAGTTACTGCTCGCTGGAGAGAAACCAGGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR CCA 72 bp | CTTTCTGAGACAGTCTCATGTATATACCAATCTCCTTaGTATTGGTGTTATAGGCATGACCTACCATTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LSETVSCIYQSP*YWCYRHDLPFL Trigger: CAGGAATGGTAGGTCATGCCTATAACACCAATACCAAGGAGATTGGTATATACATGAGACTGTCTCAGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| 3UTR CCA 72 bp | GAGACAGTCTCATGTATATACCAATCTCCTTGGTATTaGTGTTATAGGCATGACCTACCATTCCTGGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: ETVSCIYQSPWY*CYRHDLPFLVY Trigger: ATAAACCAGGAATGGTAGGTCATGCCTATAACACCAATACCAAGGAGATTGGTATATACATGAGACTGTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| CDS-3UTR GCA 90 bp | TGCACATGGGAAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTGACATGTCAGCCTTGGCTGGGCTaGTGGCTGCCCGCTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: CTWEVYCPDGGWDSELTCQPWLG*WLPACP Trigger: AGGGCAAGCGGGCAGCCAGCAGCCCAGCCAAGGCTG...ACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTCCCATGTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| CDS-3UTR TCA 90 bp | GGGGGAGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCCGATGGAGAGGTAGATaGGCCGCGGCTGTGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GGGAHSSQIILGVQFQVTRWRGR*AAAVGS Trigger: GCTCCCCACAGCCGCGGCTCATCTACCTCTCCATCG...GGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| CDS-3UTR GCA 90 bp | TGCACATGGGAAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTGACATGTTGCTGGCTGCCCGCTTaGCCTTCTCCTCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CTWEVYCPDGGWDSELTCCWLPA*PSPPAG Trigger: CCCTGCTGGAGGAGAAGGGCAAGCGGGCAGCCAGCA...ACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTCCCATGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGAGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCCCTTGGCTGGGCTGCTaGCTGCCCGCTTGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGAHSSQIILGVQFQVTPWLGC*LPACPS Trigger: AGAAGGGCAAGCGGGCAGCCAGCAGCCCAGCCAAGG...GGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCAGAGCCAGGAGAAACTaGGGCAGAGCACCGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGAHSSQIILGVQFQVTRARRN*GRAPRP Trigger: TGGGCGCGGTGCTCTGCCTCAGTTTCTCCTGGCTCT...GGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCTCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCGGCACCGGGCATGCTTaGTCTTCCTCAGCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGAHSSQIILGVQFQVTGTGHA*SSSALA Trigger: AGCCAAGGCTGAGGAAGATCAAGCATGCCCGGTGCC...GGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR TCA 90 bp | AGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGCGATGGAGAGGTAGATaGGCCGCGGCTGTGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGPFQPNHPWSPVSGDLKRWRGR*AAAVGS Trigger: GCTCCCCACAGCCGCGGCTCATCTACCTCTCCATCG...CTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGAGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCCCCACTGTGCCACAATaGTGGCAGAGATGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGGAHSSQIILGVQFQVTPTVPQ*WQRCPG Trigger: TCCTGGGCATCTCTGCCATCATTGTGGCACAGTGGG...GGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCTCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | CATGCCTTTAATCCCAACACTTGGGAGGTGGATGCAGGGGGATCTCTGAGAGTTCAGCCTTGGCTGGGCTaGTGGCTGCCCGCTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPNTWEVDAGGSLRVQPWLG*WLPACP Trigger: AGGGCAAGCGGGCAGCCAGCAGCCCAGCCAAGGCTG...AACTCTCAGAGATCCCCCTGCATCCACCTCCCAAGTGTTGGGATTAAAGGCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | TGCACATGGGAAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTGACATGTACTCCTGCTCTTGTCTaGCGGTGCTTGGGAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CTWEVYCPDGGWDSELTCTPALV*RCLGVA Trigger: TGCCACTCCCAAGCACCGGCAGACAAGAGCAGGAGT...ACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTCCCATGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTGACATGTCACTGGTACGTGGACGAAAGCTGCTaGCACCACCAGGACGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVYCPDGGWDSELTCHWYVDESC*HHQDVE Trigger: TTCCACGTCCTGGTGGTGGCAGCAGCTTTCGTCCAC...GTACCAGTGACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTGACATGTCACTGGTACGAAGTGGACGAAAGCTaGTGCCACCACCAGGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVYCPDGGWDSELTCHWYEVDES*CHHQDV Trigger: CACGTCCTGGTGGTGGCAGCAGCTTTCGTCCACTTC...GTACCAGTGACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | CAGTCAAACCTGATCAGCCAGATTTCAGGCCGAGGAGGGGAGGTTACACTCAAGCAGAAGGAGCCCCATTaGCTTGTGCCCCGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSNLISQISGRGGEVTLKQKEPH*LVPRQS Trigger: GCTCTGCCGGGGCACAAGGCAATGGGGCTCCTTCTG...CTTGAGTGTAACCTCCCCTCCTCGGCCTGAAATCTGGCTGATCAGGTTTGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CCA 90 bp | CATGCCTTTAATCCCAACACTTGGGAGGTGGATGCAGGGGGATCTCTGAGAGTTTTCCTCAGCCTTGGCTaGGCTGCTGGCTGCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPNTWEVDAGGSLRVFLSLG*AAGCPL Trigger: AAGCGGGCAGCCAGCAGCCCAGCCAAGGCTGAGGAA...AACTCTCAGAGATCCCCCTGCATCCACCTCCCAAGTGTTGGGATTAAAGGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR TCA 90 bp | AGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGCCCACTGTGCCACAATaGTGGCAGAGATGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGPFQPNHPWSPVSGDLKPTVPQ*WQRCPG Trigger: TCCTGGGCATCTCTGCCATCATTGTGGCACAGTGGG...CTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGAAACCTCGAGCCTCAGGAGTTGTGTGCAAACAGTGGAGACAACACAGTTGATCTTCCTCAGCCTTaGCTGGGCTGCTGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLEPQELCANSGDNTVDLPQP*LGCWLP Trigger: GGGCAGCCAGCAGCCCAGCCAAGGCTGAGGAAGATC...AACTGTGTTGTCTCCACTGTTTGCACACAACTCCTGAGGCTCGAGGTTTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | CCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTCGGCTACTCCTGCTCTTGTCTaGCGGTGCTTGGGAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFQPNHPWSPVSGDLKSATPALV*RCLGVA Trigger: TGCCACTCCCAAGCACCGGCAGACAAGAGCAGGAGT...AGCCGACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | CCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTCGGCTGTGGACGAAAGCTGCTaGCACCACCAGGACGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFQPNHPWSPVSGDLKSAVDESC*HHQDVE Trigger: TTCCACGTCCTGGTGGTGGCAGCAGCTTTCGTCCAC...AGCCGACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTTCTCCATGGCATGGTaGGCTTGCAGAGGAAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGPFQPNHPWSPVSGDLKFSMAW*ACRGSV Trigger: GACGCTTCCTCTGCAAGCCCACCATGCCATGGAGAA...CTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAACCTCGAGCCTCAGGAGTTGTGTGCAAACAGTGGAGACAACACAGTTGCACATCATACGGGATaGCTCTCCAACGTCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLEPQELCANSGDNTVAHHTG*LSNVPP Trigger: GGGAGGGACGTTGGAGAGTCATCCCGTATGATGTGC...AACTGTGTTGTCTCCACTGTTTGCACACAACTCCTGAGGCTCGAGGTTTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | CATGCCTTTAATCCCAACACTTGGGAGGTGGATGCAGGGGGATCTCTGAGAGTTCTGAGGCACCGGGCATaGTTGATCTTCCTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPNTWEVDAGGSLRVLRHRA*LIFLSL Trigger: AAGGCTGAGGAAGATCAAGCATGCCCGGTGCCTCAG...AACTCTCAGAGATCCCCCTGCATCCACCTCCCAAGTGTTGGGATTAAAGGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR TCA 90 bp | AGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGCCGAGAGACCTTCTCTaGATGACAGTAGACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGPFQPNHPWSPVSGDLKPRDLL*MTVDSV Trigger: CACACTGTCTACTGTCATTCAGAGAAGGTCTCTCGG...CTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGAAACCTCGAGCCTCAGGAGTTGTGTGCAAACAGTGGAGACAACACAGTTCTGAGGCACCGGGCATaGTTGATCTTCCTCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLEPQELCANSGDNTVLRHRA*LIFLSL Trigger: AAGGCTGAGGAAGATCAAGCATGCCCGGTGCCTCAG...AACTGTGTTGTCTCCACTGTTTGCACACAACTCCTGAGGCTCGAGGTTTCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | CCTGATGCTCTCCTAGCACTAACAGTCAAACCTGATCAGCCAGATTTCAGGCCGAAGACCACCTTCTCCTaGAGGGGAGCCATGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PDALLALTVKPDQPDFRPKTTFS*RGAMKY Trigger: GTACTTCATGGCTCCCCTGCAGGAGAAGGTGGTCTT...CGGCCTGAAATCTGGCTGATCAGGTTTGACTGTTAGTGCTAGGAGAGCATCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGAAACCTCGAGCCTCAGGAGTTGTGTGCAAACAGTGGAGACAACACAGTTTTCTCCATGGCATGGTaGGCTTGCAGAGGAAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLEPQELCANSGDNTVFSMAW*ACRGSV Trigger: GACGCTTCCTCTGCAAGCCCACCATGCCATGGAGAA...AACTGTGTTGTCTCCACTGTTTGCACACAACTCCTGAGGCTCGAGGTTTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTTGCCAGTCTCTGTGTaGATGCGGAAGATGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGPFQPNHPWSPVSGDLKLPVSV*MRKMLL Trigger: CAAGAGCATCTTCCGCATCCACACAGAGACTGGCAA...CTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | CCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTCGGCTGATGTGTCCAGATGTTaGCAGTCTCTGTGTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PFQPNHPWSPVSGDLKSADVSRC*QSLCGC Trigger: GCATCCACACAGAGACTGGCAACATCTGGACACATC...AGCCGACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CCA 90 bp | CCTGATGCTCTCCTAGCACTAACAGTCAAACCTGATCAGCCAGATTTCAGGCCGTTGCCAGTCTCTGTGTaGATGCGGAAGATGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PDALLALTVKPDQPDFRPLPVSV*MRKMLL Trigger: CAAGAGCATCTTCCGCATCCACACAGAGACTGGCAA...CGGCCTGAAATCTGGCTGATCAGGTTTGACTGTTAGTGCTAGGAGAGCATCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCTGAGACAGTCTCATGTATATACCAATCTCCTTGGTATTGGTGTTATAGGCCTTGGCTGGGCTGCTaGCTGCCCGCTTGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSETVSCIYQSPWYWCYRPWLGC*LPACPS Trigger: AGAAGGGCAAGCGGGCAGCCAGCAGCCCAGCCAAGG...CCTATAACACCAATACCAAGGAGATTGGTATATACATGAGACTGTCTCAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CCA 90 bp | AGACAGCCAATGCTACACAGAGACCATGTCTCGAAAAACCAAAAATACTATGGTTTCCTCAGCCTTGGCTaGGCTGCTGGCTGCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQPMLHRDHVSKNQKYYGFLSLG*AAGCPL Trigger: AAGCGGGCAGCCAGCAGCCCAGCCAAGGCTGAGGAA...ACCATAGTATTTTTGGTTTTTCGAGACATGGTCTCTGTGTAGCATTGGCTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR TCA 90 bp | TGTATATACCAATCTCCTTGGTATTGGTGTTATAGGCATGACCTACCATTCCTGGGCACCGGGCATGCTTaGTCTTCCTCAGCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CIYQSPWYWCYRHDLPFLGTGHA*SSSALA Trigger: AGCCAAGGCTGAGGAAGATCAAGCATGCCCGGTGCC...CAGGAATGGTAGGTCATGCCTATAACACCAATACCAAGGAGATTGGTATATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | TTGATCAAGGTTCAATTTTACTATTCAGAGACACTGGGTTATGAAGAAGGGGGACAGAAGGAGCCCCATTaGCTTGTGCCCCGGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIKVQFYYSETLGYEEGGQKEPH*LVPRQS Trigger: GCTCTGCCGGGGCACAAGGCAATGGGGCTCCTTCTG...TCCCCCTTCTTCATAACCCAGTGTCTCTGAATAGTAAAATTGAACCTTGATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027727.15 |
||
| CDS-3UTR CCA 90 bp | CAGTCAAACCTGATCAGCCAGATTTCAGGCCGAGGAGGGGAGGTTACACTCAAGCTGAATAGTCCAGTTTaGAAAAAGTCCGAGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: QSNLISQISGRGGEVTLKLNSPV*KKSERP Trigger: AGGTCTCTCGGACTTTTTCCAAACTGGACTATTCAG...CTTGAGTGTAACCTCCCCTCCTCGGCCTGAAATCTGGCTGATCAGGTTTGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGCTGAATAGTCCAGTTTaGAAAAAGTCCGAGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RGPFQPNHPWSPVSGDLKLNSPV*KKSERP Trigger: AGGTCTCTCGGACTTTTTCCAAACTGGACTATTCAG...CTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR TCA 90 bp | AGACAGCCAATGCTACACAGAGACCATGTCTCGAAAAACCAAAAATACTATGGTGCACATCATACGGGATaGCTCTCCAACGTCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RQPMLHRDHVSKNQKYYGAHHTG*LSNVPP Trigger: GGGAGGGACGTTGGAGAGTCATCCCGTATGATGTGC...ACCATAGTATTTTTGGTTTTTCGAGACATGGTCTCTGTGTAGCATTGGCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | AGACAGCCAATGCTACACAGAGACCATGTCTCGAAAAACCAAAAATACTATGGTGAAGTGGACGAAAGCTaGTGCCACCACCAGGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQPMLHRDHVSKNQKYYGEVDES*CHHQDV Trigger: CACGTCCTGGTGGTGGCAGCAGCTTTCGTCCACTTC...ACCATAGTATTTTTGGTTTTTCGAGACATGGTCTCTGTGTAGCATTGGCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | AGACAGCCAATGCTACACAGAGACCATGTCTCGAAAAACCAAAAATACTATGGTAAGACCACCTTCTCCTaGAGGGGAGCCATGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RQPMLHRDHVSKNQKYYGKTTFS*RGAMKY Trigger: GTACTTCATGGCTCCCCTGCAGGAGAAGGTGGTCTT...ACCATAGTATTTTTGGTTTTTCGAGACATGGTCTCTGTGTAGCATTGGCTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | TGTATATACCAATCTCCTTGGTATTGGTGTTATAGGCATGACCTACCATTCCTGGATGTGTCCAGATGTTaGCAGTCTCTGTGTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CIYQSPWYWCYRHDLPFLDVSRC*QSLCGC Trigger: GCATCCACACAGAGACTGGCAACATCTGGACACATC...CAGGAATGGTAGGTCATGCCTATAACACCAATACCAAGGAGATTGGTATATACA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | AGACAGCCAATGCTACACAGAGACCATGTCTCGAAAAACCAAAAATACTATGGTTCAGCGATAGTAAAGTaGATGGTGGGTACAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: RQPMLHRDHVSKNQKYYGSAIVK*MVGTTP Trigger: TGGTGTTGTACCCACCATGCACTTTACTATCGCTGA...ACCATAGTATTTTTGGTTTTTCGAGACATGGTCTCTGTGTAGCATTGGCTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTGAGACAGTCTCATGTATATACCAATCTCCTTGGTATTGGTGTTATAGGTCAGCGATAGTAAAGTaGATGGTGGGTACAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSETVSCIYQSPWYWCYRSAIVK*MVGTTP Trigger: TGGTGTTGTACCCACCATGCACTTTACTATCGCTGA...CCTATAACACCAATACCAAGGAGATTGGTATATACATGAGACTGTCTCAGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CAA 90 bp | TGCACATGGGAAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTGACATGTCTGCTGGCTGCCCGCTaGCCCTTCTCCTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CTWEVYCPDGGWDSELTCLLAAR*PFSSSR Trigger: CCTGCTGGAGGAGAAGGGCAAGCGGGCAGCCAGCAG...ACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTCCCATGTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CAA 90 bp | GGGGCCCATTCCAGCCAAATCATCCTTGGAGTCCAGTTTCAGGTGACCTCAAGTCTGCTGGCTGCCCGCTaGCCCTTCTCCTCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAHSSQIILGVQFQVTSSLLAAR*PFSSSR Trigger: CCTGCTGGAGGAGAAGGGCAAGCGGGCAGCCAGCAG...ACTTGAGGTCACCTGAAACTGGACTCCAAGGATGATTTGGCTGGAATGGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CAA 90 bp | GAAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTGACATGTCACTGGTACAGGCACCGGGCATGCTaGATCTTCCTCAGCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EVYCPDGGWDSELTCHWYRHRAC*IFLSLG Trigger: GCCAAGGCTGAGGAAGATCAAGCATGCCCGGTGCCT...GTACCAGTGACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CAA 90 bp | GAAGTGTACTGCCCGGACGGAGGCTGGGACAGTGAGCTGACATGTCACTGGTACCCCACCGTGGTGGCCTaGACAAAGCCCTCAGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: EVYCPDGGWDSELTCHWYPTVVA*TKPSAI Trigger: TATCGCTGAGGGCTTTGTCAAGGCCACCACGGTGGG...GTACCAGTGACATGTCAGCTCACTGTCCCAGCCTCCGTCCGGGCAGTACACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CAA 90 bp | CCTGATGCTCTCCTAGCACTAACAGTCAAACCTGATCAGCCAGATTTCAGGCCGAGGCACCGGGCATGCTaGATCTTCCTCAGCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PDALLALTVKPDQPDFRPRHRAC*IFLSLG Trigger: GCCAAGGCTGAGGAAGATCAAGCATGCCCGGTGCCT...CGGCCTGAAATCTGGCTGATCAGGTTTGACTGTTAGTGCTAGGAGAGCATCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCTGAGACAGTCTCATGTATATACCAATCTCCTTGGTATTGGTGTTATAGGCCCACCGTGGTGGCCTaGACAAAGCCCTCAGCGATA | + |
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Preference number: 5 (lower is better) Translates to: LSETVSCIYQSPWYWCYRPTVVA*TKPSAI Trigger: TATCGCTGAGGGCTTTGTCAAGGCCACCACGGTGGG...CCTATAACACCAATACCAAGGAGATTGGTATATACATGAGACTGTCTCAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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| CDS-3UTR CAA 90 bp | AGACAGCCAATGCTACACAGAGACCATGTCTCGAAAAACCAAAAATACTATGGTAGATGTGTCCAGATGTaGCCAGTCTCTGTGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: RQPMLHRDHVSKNQKYYGRCVQM*PVSVWM Trigger: CATCCACACAGAGACTGGCAACATCTGGACACATCT...ACCATAGTATTTTTGGTTTTTCGAGACATGGTCTCTGTGTAGCATTGGCTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027727.15 ENSMUST00000112237.2 |
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