Pregenerated sensors for ADI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020629Ensembl transcript IDs: ENSMUST00000020957.13
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTTCTGACTCTTCCCCAGCAACCAATATCACAAACACCTGGCAGTaGACTTTAGCAGTGGGCACACACATGGGTCAAGGAACGGTCAAA | + |
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Preference number: 1 (lower is better) Translates to: FSDSSPATNITNTWQ*TLAVGTHMGQGTVK Trigger: TTTGACCGTTCCTTGACCCATGTGTGTGCCCACTGCTAAAGTCCACTGCCAGGTGTTTGTGATATTGGTTGCTGGGGAAGAGTCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR GCA 90 bp | AGCAAAGGAGAAAAACGTCATCTGGTTAGTTGTGCTGGTTATAACTaGCCTCTTGCAGGAGGCATAGCTTCACACCAACAGACACCTAAA | + |
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Preference number: 1 (lower is better) Translates to: SKGEKRHLVSCAGYN*PLAGGIASHQQTPK Trigger: TTTAGGTGTCTGTTGGTGTGAAGCTATGCCTCCTGCAAGAGGGCAGTTATAACCAGCACAACTAACCAGATGACGTTTTTCTCCTTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR TCA 90 bp | AAGAGAGCTAGTCTAGCCTCAAGTTCAAATACAAAAGCAGAAAAGTaGGCAACTTTCCATTCGGTTACCACAGCAGGAGATTCACACAGT | + |
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Preference number: 1 (lower is better) Translates to: KRASLASSSNTKAEK*ATFHSVTTAGDSHS Trigger: ACTGTGTGAATCTCCTGCTGTGGTAACCGAATGGAAAGTTGCTCACTTTTCTGCTTTTGTATTTGAACTTGAGGCTAGACTAGCTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTATTGGGGAAAGCCAGAGCTCTGGGAATGACTCATATCCCACGCAGGGGGGATTGACCCGGCTGTaGTTGCTGGGGAGATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GFIGESQSSGNDSYPTQGGLTRL*LLGRFS Trigger: AGAAAATCTCCCCAGCAACCACAGCCGGGTCAATCC...CCCCTGCGTGGGATATGAGTCATTCCCAGAGCTCTGGCTTTCCCCAATAAAGCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGGGAATGACTCATATCCCACGCAGGGGTAGAGGAGTTGACCCCGAGGAGGCGGCCAGAGCATTATaGACCTCTATTTTTCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: ALGMTHIPRRGRGVDPEEAARAL*TSIFLN Trigger: ATTTAGAAAAATAGAGGTGCATAATGCTCTGGCCGC...CTCCTCGGGGTCAACTCCTCTACCCCTGCGTGGGATATGAGTCATTCCCAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGGAGAAAAACGTCATCTGGTTAGTTGTGCTGGTTATAACTGCCCTCTTGAGACACCTAAAGATCTaGGAGATGAAGATTGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: AKEKNVIWLVVLVITALLRHLKI*EMKIGH Trigger: ATGGCCAATCTTCATCTCCCAGATCTTTAGGTGTCT...CAAGAGGGCAGTTATAACCAGCACAACTAACCAGATGACGTTTTTCTCCTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGGAGAAAAACGTCATCTGGTTAGTTGTGCTGGTTATAACTGCCCTCTTGACAAAAGCAGAAAAGTaGGCAACTTTCCATTCGGTT | + |
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Preference number: 2 (lower is better) Translates to: AKEKNVIWLVVLVITALLTKAEK*ATFHSV Trigger: AACCGAATGGAAAGTTGCTCACTTTTCTGCTTTTGT...CAAGAGGGCAGTTATAACCAGCACAACTAACCAGATGACGTTTTTCTCCTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR TCA 72 bp | ACGAGGCTTTATTGGGGAAAGCCAGAGCTCTGGGAATaGCTCATATCCCACGCAGGGGTAGAGGAGTTGACC | + |
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Preference number: 3 (lower is better) Translates to: TRLYWGKPELWE*LISHAGVEELT Trigger: GGTCAACTCCTCTACCCCTGCGTGGGATATGAGTCATTCCCAGAGCTCTGGCTTTCCCCAATAAAGCCTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR CCA 72 bp | TCTTCCCCAGCAACCAATATCACAAACACCTGGCAGTaGACTTTAGCAGTGGGCACACACATGGGTCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: SSPATNITNTWQ*TLAVGTHMGQG Trigger: TCCTTGACCCATGTGTGTGCCCACTGCTAAAGTCCACTGCCAGGTGTTTGTGATATTGGTTGCTGGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR CCA 72 bp | TCTGACTCTTCCCCAGCAACCAATATCACAAACACCTaGCAGTGGACTTTAGCAGTGGGCACACACATGGGT | + |
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Preference number: 3 (lower is better) Translates to: SDSSPATNITNT*QWTLAVGTHMG Trigger: ACCCATGTGTGTGCCCACTGCTAAAGTCCACTGCCAGGTGTTTGTGATATTGGTTGCTGGGGAAGAGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR TCA 72 bp | CACCTAAAGATCTGGGAGATGAAGATTGGCCATGCATaGATGCACATACCAATCCAGGGCTCCTATACCTCT | + |
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Preference number: 3 (lower is better) Translates to: HLKIWEMKIGHA*MHIPIQGSYTS Trigger: AGAGGTATAGGAGCCCTGGATTGGTATGTGCATTCATGCATGGCCAATCTTCATCTCCCAGATCTTTAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR GCA 72 bp | GAAAAACGTCATCTGGTTAGTTGTGCTGGTTATAACTaGCCTCTTGCAGGAGGCATAGCTTCACACCAACAG | + |
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Preference number: 3 (lower is better) Translates to: EKRHLVSCAGYN*PLAGGIASHQQ Trigger: CTGTTGGTGTGAAGCTATGCCTCCTGCAAGAGGGCAGTTATAACCAGCACAACTAACCAGATGACGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR CCA 72 bp | CCCACTCAACAATCAGCAAAGGAGAAAAACGTCATCTaGTTAGTTGTGCTGGTTATAACTGCCCTCTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: PTQQSAKEKNVI*LVVLVITALLQ Trigger: CTGCAAGAGGGCAGTTATAACCAGCACAACTAACCAGATGACGTTTTTCTCCTTTGCTGATTGTTGAGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| 3UTR TCA 72 bp | CACATACCAATCCAGGGCTCCTATACCTCTAAGTCTTaGCAGTTAGGGAAAATTAAGGTCACTTTTTCACAT | + |
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Preference number: 3 (lower is better) Translates to: HIPIQGSYTSKS*QLGKIKVTFSH Trigger: ATGTGAAAAAGTGACCTTAATTTTCCCTAACTGTCAAGACTTAGAGGTATAGGAGCCCTGGATTGGTATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR CCA 90 bp | GCAACTTTCCATTCGGTTACCACAGCAGGAGATTCACACAGTGCAGTTTTCTCTTCCGCGGGTCGGCGGTaGACTCGTCCATATACCAGG | + |
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Preference number: 4 (lower is better) Translates to: ATFHSVTTAGDSHSAVFSSAGRR*TRPYTR Trigger: CCTGGTATATGGACGAGTCCACCGCCGACCCGCGGA...AGAGAAAACTGCACTGTGTGAATCTCCTGCTGTGGTAACCGAATGGAAAGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR CCA 90 bp | GCTTTATTGGGGAAAGCCAGAGCTCTGGGAATGACTCATATCCCACGCAGGGGTACACGGGCATCAAAATaGTCAGCTGGCCGGTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: ALLGKARALGMTHIPRRGTRASK*SAGRLY Trigger: ATACAACCGGCCAGCTGACCATTTTGATGCCCGTGT...ACCCCTGCGTGGGATATGAGTCATTCCCAGAGCTCTGGCTTTCCCCAATAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR TCA 90 bp | AGCAACTTTCCATTCGGTTACCACAGCAGGAGATTCACACAGTGCAGTTTTCTCTCTTCTCGTCCAGTGTaGAGCGGTGATAGATGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SNFPFGYHSRRFTQCSFLSSRPV*SGDRCR Trigger: CCGGCATCTATCACCGCTTCACACTGGACGAGAAGA...GAGAAAACTGCACTGTGTGAATCTCCTGCTGTGGTAACCGAATGGAAAGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR GCA 90 bp | ACAATCAGCAAAGGAGAAAAACGTCATCTGGTTAGTTGTGCTGGTTATAACTGCAGAGCACTCCGAGCGTaGGCAGCTGCTCCAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TISKGEKRHLVSCAGYNCRALRA*AAAPGS Trigger: TGAGCCTGGAGCAGCTGCGCACGCTCGGAGTGCTCT...GCAGTTATAACCAGCACAACTAACCAGATGACGTTTTTCTCCTTTGCTGATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR TCA 90 bp | CCACACGAGGCTTTATTGGGGAAAGCCAGAGCTCTGGGAATGACTCATATCCCACCTCAAAGAACATCTTaGTCTTCTCCTCGTAATTGG | + |
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Preference number: 4 (lower is better) Translates to: PHEALLGKARALGMTHIPPQRTS*SSPRNW Trigger: CCAATTACGAGGAGAAGATCAAGATGTTCTTTGAGG...TGGGATATGAGTCATTCCCAGAGCTCTGGCTTTCCCCAATAAAGCCTCGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR CCA 90 bp | CACTCAACAATCAGCAAAGGAGAAAAACGTCATCTGGTTAGTTGTGCTGGTTATAGCTGGCCGGTTGTATaGTGTCCACACAGGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: HSTISKGEKRHLVSCAGYSWPVV*CPHRFS Trigger: GGAGAACCTGTGTGGACACCATACAACCGGCCAGCT...ATAACCAGCACAACTAACCAGATGACGTTTTTCTCCTTTGCTGATTGTTGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR TCA 90 bp | TTAAAAGACACTGATCTCACAATCCTAGCAAAGAGAGCTAGTCTAGCCTCAAGTTGTCCTCCTTGTCCCTaGCATCGAAGTACCCACTAC | + |
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Preference number: 4 (lower is better) Translates to: LKDTDLTILAKRASLASSCPPCP*HRSTHY Trigger: GTAGTGGGTACTTCGATGTCAGGGACAAGGAGGACA...ACTTGAGGCTAGACTAGCTCTCTTTGCTAGGATTGTGAGATCAGTGTCTTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR CCA 90 bp | GCAAAGGAGAAAAACGTCATCTGGTTAGTTGTGCTGGTTATAACTGCCCTCTTGCAACAAACAGCCGCATaGCCTTCACGTAATTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AKEKNVIWLVVLVITALLQQTAA*PSRNSS Trigger: AGAAGAATTACGTGAAGGCCATGCGGCTGTTTGTTG...CAAGAGGGCAGTTATAACCAGCACAACTAACCAGATGACGTTTTTCTCCTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR GCA 90 bp | GCAAAGGAGAAAAACGTCATCTGGTTAGTTGTGCTGGTTATAACTGCCCTCTTGATCTCCTCATCCAGATaGAGATGTTCCTCAAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: AKEKNVIWLVVLVITALLISSSR*RCSSKN Trigger: GTTCTTTGAGGAACATCTGCATCTGGATGAGGAGAT...CAAGAGGGCAGTTATAACCAGCACAACTAACCAGATGACGTTTTTCTCCTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS CCA 90 bp | GTGCGCAGCTGCTCCAGGCTCACGGGGCGGTCGGGCTGTGCGCGGTaGGGCTTCCGCGGGTCGGCGGTGGACTCGTCCATATACCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: VRSCSRLTGRSGCAR*GFRGSAVDSSIYQA Trigger: GGCCTGGTATATGGACGAGTCCACCGCCGACCCGCGGAAGCCCCACCGCGCACAGCCCGACCGCCCCGTGAGCCTGGAGCAGCTGCGCAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS GCA 90 bp | TCCGAGCGTGCGCAGCTGCTCCAGGCTCACGGGGCGGTCGGGCTGTaGGCGGTGGGGCTTCCGCGGGTCGGCGGTGGACTCGTCCATATA | + |
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Preference number: 5 (lower is better) Translates to: SERAQLLQAHGAVGL*AVGLPRVGGGLVHI Trigger: TATATGGACGAGTCCACCGCCGACCCGCGGAAGCCCCACCGCGCACAGCCCGACCGCCCCGTGAGCCTGGAGCAGCTGCGCACGCTCGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS TCA 90 bp | CCCCCTTCTCCATGGAAATCCGGATCCACTTGTCCTCCTTGTCCCTaGCATCGAAGTACCCACTACCCTCCAGGATGTAGCGGATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PPSPWKSGSTCPPCP*HRSTHYPPGCSGSP Trigger: AGGAGATCCGCTACATCCTGGAGGGTAGTGGGTACTTCGATGTCAGGGACAAGGAGGACAAGTGGATCCGGATTTCCATGGAGAAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR CAA 90 bp | CCACACGAGGCTTTATTGGGGAAAGCCAGAGCTCTGGGAATGACTCATATCCCATGGTCAGCTGGCCGGTaGTATGGTGTCCACACAGGT | + |
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Preference number: 5 (lower is better) Translates to: PHEALLGKARALGMTHIPWSAGR*YGVHTG Trigger: ACCTGTGTGGACACCATACAACCGGCCAGCTGACCA...TGGGATATGAGTCATTCCCAGAGCTCTGGCTTTCCCCAATAAAGCCTCGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR CAA 90 bp | AGCAACTTTCCATTCGGTTACCACAGCAGGAGATTCACACAGTGCAGTTTTCTCGAAATCCGGATCCACTaGTCCTCCTTGTCCCTGACA | + |
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Preference number: 5 (lower is better) Translates to: SNFPFGYHSRRFTQCSFLEIRIH*SSLSLT Trigger: TGTCAGGGACAAGGAGGACAAGTGGATCCGGATTTC...GAGAAAACTGCACTGTGTGAATCTCCTGCTGTGGTAACCGAATGGAAAGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR CAA 90 bp | AGCAACTTTCCATTCGGTTACCACAGCAGGAGATTCACACAGTGCAGTTTTCTCATCCACTTGTCCTCCTaGTCCCTGACATCGAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: SNFPFGYHSRRFTQCSFLIHLSS*SLTSKY Trigger: GTACTTCGATGTCAGGGACAAGGAGGACAAGTGGAT...GAGAAAACTGCACTGTGTGAATCTCCTGCTGTGGTAACCGAATGGAAAGTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS-3UTR CAA 90 bp | GCAAAGGAGAAAAACGTCATCTGGTTAGTTGTGCTGGTTATAACTGCCCTCTTGTTGGGAAGTGTATCTTaGCATATGGTGATGATGTCC | + |
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Preference number: 5 (lower is better) Translates to: AKEKNVIWLVVLVITALLLGSVS*HMVMMS Trigger: GGACATCATCACCATATGCAAAGATACACTTCCCAA...CAAGAGGGCAGTTATAACCAGCACAACTAACCAGATGACGTTTTTCTCCTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS GCA 72 bp | GCGCAGCTGCTCCAGGCTCACGGGGCGGTCGGGCTGTaGGCGGTGGGGCTTCCGCGGGTCGGCGGTGGACTC | + |
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Preference number: 6 (lower is better) Translates to: AQLLQAHGAVGL*AVGLPRVGGGL Trigger: GAGTCCACCGCCGACCCGCGGAAGCCCCACCGCGCACAGCCCGACCGCCCCGTGAGCCTGGAGCAGCTGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS CAA 72 bp | CCCTTCTCCATGGAAATCCGGATCCACTTGTCCTCCTaGTCCCTGACATCGAAGTACCCACTACCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PFSMEIRIHLSS*SLTSKYPLPSR Trigger: CCTGGAGGGTAGTGGGTACTTCGATGTCAGGGACAAGGAGGACAAGTGGATCCGGATTTCCATGGAGAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS TCA 72 bp | CCATGGAAATCCGGATCCACTTGTCCTCCTTGTCCCTaGCATCGAAGTACCCACTACCCTCCAGGATGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PWKSGSTCPPCP*HRSTHYPPGCS Trigger: GCTACATCCTGGAGGGTAGTGGGTACTTCGATGTCAGGGACAAGGAGGACAAGTGGATCCGGATTTCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS CAA 90 bp | GGAAGAGTAATCATGTCCCCCTTCTCCATGGAAATCCGGATCCACTaGTCCTCCTTGTCCCTGACATCGAAGTACCCACTACCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRVIMSPFSMEIRIH*SSLSLTSKYPLPSR Trigger: CCTGGAGGGTAGTGGGTACTTCGATGTCAGGGACAAGGAGGACAAGTGGATCCGGATTTCCATGGAGAAGGGGGACATGATTACTCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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| CDS CAA 72 bp | ATCATGTCCCCCTTCTCCATGGAAATCCGGATCCACTaGTCCTCCTTGTCCCTGACATCGAAGTACCCACTA | + |
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Preference number: 6 (lower is better) Translates to: IMSPFSMEIRIH*SSLSLTSKYPL Trigger: TAGTGGGTACTTCGATGTCAGGGACAAGGAGGACAAGTGGATCCGGATTTCCATGGAGAAGGGGGACATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020957.13 |
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