Pregenerated sensors for ADHFE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025911Ensembl transcript IDs: ENSMUST00000027044.15, ENSMUST00000130927.8, ENSMUST00000144177.8, ENSMUST00000186467.2, ENSMUST00000190654.2
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGTGCATGGACTGCCCAGATGTCGCTGATTGGGTTGCTACCCTaGTATGCTGGTCGTTGGATGGGGTTGGAAGGGCAGGGGCTCCGC | + |
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Preference number: 1 (lower is better) Translates to: CSAWTAQMSLIGLLP*YAGRWMGLEGQGLR Trigger: GCGGAGCCCCTGCCCTTCCAACCCCATCCAACGACCAGCATACCAGGGTAGCAACCCAATCAGCGACATCTGGGCAGTCCATGCACTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR GCA 90 bp | TGCATGGACTGCCCAGATGTCGCTGATTGGGTTGCTACCCTGGTATaGTGGTCGTTGGATGGGGTTGGAAGGGCAGGGGCTCCGCATGCT | + |
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Preference number: 1 (lower is better) Translates to: CMDCPDVADWVATLV*WSLDGVGRAGAPHA Trigger: AGCATGCGGAGCCCCTGCCCTTCCAACCCCATCCAACGACCAGCATACCAGGGTAGCAACCCAATCAGCGACATCTGGGCAGTCCATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR GCA 90 bp | GGTATGCTGGTCGTTGGATGGGGTTGGAAGGGCAGGGGCTCCGCATaGTGTAGGGAATGGCGGTGTATGACTCCAGAGCATGGCAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: GMLVVGWGWKGRGSA*CREWRCMTPEHGKG Trigger: TCCTTTGCCATGCTCTGGAGTCATACACCGCCATTCCCTACAGCATGCGGAGCCCCTGCCCTTCCAACCCCATCCAACGACCAGCATACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR GCA 90 bp | GGAGGGCATCTGCCAACACAAGCCCAGCATCTTGGATCCTGGCAGTaGGGATGTTGGCTCCTAATATTCCTGCCGTCTCCAGGTGCCGCT | + |
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Preference number: 1 (lower is better) Translates to: GGHLPTQAQHLGSWQ*GCWLLIFLPSPGAA Trigger: AGCGGCACCTGGAGACGGCAGGAATATTAGGAGCCAACATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGTGTTGGCAGATGCCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR CCA 90 bp | GTTGGATGGGGTTGGAAGGGCAGGGGCTCCGCATGCTGTAGGGAATaGCGGTGTATGACTCCAGAGCATGGCAAAGGACATCGAAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: VGWGWKGRGSACCRE*RCMTPEHGKGHRSH Trigger: GTGGCTTCGATGTCCTTTGCCATGCTCTGGAGTCATACACCGCCATTCCCTACAGCATGCGGAGCCCCTGCCCTTCCAACCCCATCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR CCA 90 bp | ATGGACTGCCCAGATGTCGCTGATTGGGTTGCTACCCTGGTATGCTaGTCGTTGGATGGGGTTGGAAGGGCAGGGGCTCCGCATGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: MDCPDVADWVATLVC*SLDGVGRAGAPHAV Trigger: TACAGCATGCGGAGCCCCTGCCCTTCCAACCCCATCCAACGACCAGCATACCAGGGTAGCAACCCAATCAGCGACATCTGGGCAGTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR CCA 90 bp | TCCAGAGCATGGCAAAGGACATCGAAGCCACTGTTGGCAACCACCTaGCAAGGCATGTGGAGAGTGTGCAGGGGATCAACCAGTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: SRAWQRTSKPLLATT*QGMWRVCRGSTSPR Trigger: CCTGGGACTGGTTGATCCCCTGCACACTCTCCACATGCCTTGCCAGGTGGTTGCCAACAGTGGCTTCGATGTCCTTTGCCATGCTCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR GCA 90 bp | GTCGCTGCCAGCAAGAAGACCATCACCAGAGGTAGCTATAGTCCCTaGATCTCCAGAGCTCTGCTTCTGCCATCTCAACTTGGCGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: VAASKKTITRGSYSP*ISRALLLPSQLGAA Trigger: GGCAGCGCCAAGTTGAGATGGCAGAAGCAGAGCTCTGGAGATGCAGGGACTATAGCTACCTCTGGTGATGGTCTTCTTGCTGGCAGCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| 3UTR CCA 90 bp | AGTGAGGGCTGGATGCATACAGATTGGCGGCTTTACAGGTGTCCATaGTGGAGCCCCCACCCACAGCAACATAGGCATCAAACGCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SEGWMHTDWRLYRCP*WSPHPQQHRHQTLP Trigger: AGGGAGCGTTTGATGCCTATGTTGCTGTGGGTGGGGGCTCCACCATGGACACCTGTAAAGCCGCCAATCTGTATGCATCCAGCCCTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
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| 3UTR CCA 90 bp | CAAAGGACATCGAAGCCACTGTTGGCAACCACCTGGCAAGGCATGTaGAGAGTGTGCAGGGGATCAACCAGTCCCAGGGTGGGTTTGATG | + |
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Preference number: 1 (lower is better) Translates to: QRTSKPLLATTWQGM*RVCRGSTSPRVGLM Trigger: CATCAAACCCACCCTGGGACTGGTTGATCCCCTGCACACTCTCCACATGCCTTGCCAGGTGGTTGCCAACAGTGGCTTCGATGTCCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR TCA 90 bp | CTGCCATCTCAACTTGGCGCTGCCTCCACCTCACTGAATGTCAGCTaGAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: LPSQLGAASTSLNVS*RQTWWQGRSFLCCG Trigger: GCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTGACATTCAGTGAGGTGGAGGCAGCGCCAAGTTGAGATGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| 3UTR CCA 90 bp | GAGGGCTGGATGCATACAGATTGGCGGCTTTACAGGTGTCCATGGTaGAGCCCCCACCCACAGCAACATAGGCATCAAACGCTCCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: EGWMHTDWRLYRCPW*SPHPQQHRHQTLPF Trigger: AAAAGGGAGCGTTTGATGCCTATGTTGCTGTGGGTGGGGGCTCCACCATGGACACCTGTAAAGCCGCCAATCTGTATGCATCCAGCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
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| 3UTR CCA 90 bp | CGGTGTATGACTCCAGAGCATGGCAAAGGACATCGAAGCCACTGTTaGCAACCACCTGGCAAGGCATGTGGAGAGTGTGCAGGGGATCAA | + |
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Preference number: 1 (lower is better) Translates to: RCMTPEHGKGHRSHC*QPPGKACGECAGDQ Trigger: TTGATCCCCTGCACACTCTCCACATGCCTTGCCAGGTGGTTGCCAACAGTGGCTTCGATGTCCTTTGCCATGCTCTGGAGTCATACACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR CCA 90 bp | ATTTTCGGAGGGCATCTGCCAACACAAGCCCAGCATCTTGGATCCTaGCAGTGCGGATGTTGGCTCCTAATATTCCTGCCGTCTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: IFGGHLPTQAQHLGS*QCGCWLLIFLPSPG Trigger: ACCTGGAGACGGCAGGAATATTAGGAGCCAACATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGTGTTGGCAGATGCCCTCCGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR GCA 90 bp | AATGGGGGCATTGACATAATCAAGGAACTCAGAGTGAGGGCTGGATaGATACAGATTGGCGGCTTTACAGGTGTCCATGGTGGAGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: NGGIDIIKELRVRAG*IQIGGFTGVHGGAP Trigger: GGGGGCTCCACCATGGACACCTGTAAAGCCGCCAATCTGTATGCATCCAGCCCTCACTCTGAGTTCCTTGATTATGTCAATGCCCCCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
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| 3UTR GCA 90 bp | GACAGCCCTCTTCAGATATTTGGCAACAATCTGCAGTGCATGGACTaGCCAGATGTCGCTGATTGGGTTGCTACCCTGGTATGCTGGTCG | + |
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Preference number: 1 (lower is better) Translates to: DSPLQIFGNNLQCMD*PDVADWVATLVCWS Trigger: CGACCAGCATACCAGGGTAGCAACCCAATCAGCGACATCTGGGCAGTCCATGCACTGCAGATTGTTGCCAAATATCTGAAGAGGGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR CCA 90 bp | CAGCTGAAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTaGCTTGTTCCAAGATGGCTGCCTGCAAATCAGCCAACTGGACGA | + |
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Preference number: 1 (lower is better) Translates to: QLKADVVAREKFSML*LVPRWLPANQPTGR Trigger: TCGTCCAGTTGGCTGATTTGCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| 3UTR TCA 90 bp | TGCGAGCTTCGTGACCCTTTCCTGGGGCAGTGTTCCTTTCACCAATaGAGGAATGTCATCCTTGGAATAACCAAGAGCAGCCAGACCGTC | + |
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Preference number: 1 (lower is better) Translates to: CELRDPFLGQCSFHQ*RNVILGITKSSQTV Trigger: GACGGTCTGGCTGCTCTTGGTTATTCCAAGGATGACATTCCTTCATTGGTGAAAGGAACACTGCCCCAGGAAAGGGTCACGAAGCTCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR TCA 90 bp | AAGCAGACAAATCCTCTTCTGACTGGGCACGAGGTGCGAGCTTCGTaGCCCTTTCCTGGGGCAGTGTTCCTTTCACCAATGAAGGAATGT | + |
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Preference number: 1 (lower is better) Translates to: KQTNPLLTGHEVRAS*PFPGAVFLSPMKEC Trigger: ACATTCCTTCATTGGTGAAAGGAACACTGCCCCAGGAAAGGGTCACGAAGCTCGCACCTCGTGCCCAGTCAGAAGAGGATTTGTCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR CCA 90 bp | AATAGGAATTTTCGGAGGGCATCTGCCAACACAAGCCCAGCATCTTaGATCCTGGCAGTGCGGATGTTGGCTCCTAATATTCCTGCCGTC | + |
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Preference number: 1 (lower is better) Translates to: NRNFRRASANTSPAS*ILAVRMLAPNIPAV Trigger: GACGGCAGGAATATTAGGAGCCAACATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGTGTTGGCAGATGCCCTCCGAAAATTCCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR CCA 90 bp | AGTTTCATGGATGCTTCAAACAAAGCAGACAAATCCTCTTCTGACTaGGCACGAGGTGCGAGCTTCGTGACCCTTTCCTGGGGCAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: SFMDASNKADKSSSD*ARGASFVTLSWGSV Trigger: AACACTGCCCCAGGAAAGGGTCACGAAGCTCGCACCTCGTGCCCAGTCAGAAGAGGATTTGTCTGCTTTGTTTGAAGCATCCATGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR TCA 90 bp | GCATGTGGAGAGTGTGCAGGGGATCAACCAGTCCCAGGGTGGGTTTaGTGGCTCGTGAAGCAATGCCAGTTTTTACTTTCAAATGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: ACGECAGDQPVPGWV*WLVKQCQFLLSNAH Trigger: ATGAGCATTTGAAAGTAAAAACTGGCATTGCTTCACGAGCCATCAAACCCACCCTGGGACTGGTTGATCCCCTGCACACTCTCCACATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR GCA 90 bp | ACACCAGCATTTCCGAAGCCAATGCCAGCAAAAGCACTTGCCAAGTaGATTTTAGACCTTGCTTCCAGATCATCTGGGTTTCTGACAGCC | + |
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Preference number: 1 (lower is better) Translates to: TPAFPKPMPAKALAK*ILDLASRSSGFLTA Trigger: GGCTGTCAGAAACCCAGATGATCTGGAAGCAAGGTCTAAAATGCACTTGGCAAGTGCTTTTGCTGGCATTGGCTTCGGAAATGCTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR GCA 90 bp | CAGATGAACACCAGCATTTCCGAAGCCAATGCCAGCAAAAGCACTTaGCAAGTGCATTTTAGACCTTGCTTCCAGATCATCTGGGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: QMNTSISEANASKST*QVHFRPCFQIIWVS Trigger: AGAAACCCAGATGATCTGGAAGCAAGGTCTAAAATGCACTTGGCAAGTGCTTTTGCTGGCATTGGCTTCGGAAATGCTGGTGTTCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR GCA 90 bp | GAAGCCAATGCCAGCAAAAGCACTTGCCAAGTGCATTTTAGACCTTaGTTCCAGATCATCTGGGTTTCTGACAGCCCTCTTCAGATATTT | + |
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Preference number: 1 (lower is better) Translates to: EANASKSTCQVHFRP*FQIIWVSDSPLQIF Trigger: AAATATCTGAAGAGGGCTGTCAGAAACCCAGATGATCTGGAAGCAAGGTCTAAAATGCACTTGGCAAGTGCTTTTGCTGGCATTGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR CCA 90 bp | ACAATAAGTATGTATAAAATACAAAATGGGAGACCAGGTGAGGCATaGTGCATAATCTCAGCGCTGGGAAGACAGAGGCAGAAGAACCCC | + |
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Preference number: 1 (lower is better) Translates to: TISMYKIQNGRPGEA*CIISALGRQRQKNP Trigger: GGGGTTCTTCTGCCTCTGTCTTCCCAGCGCTGAGATTATGCACCATGCCTCACCTGGTCTCCCATTTTGTATTTTATACATACTTATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| 3UTR GCA 90 bp | CACAGCAACATAGGCATCAAACGCTCCCTTTTTGGCAAATTCAATTaGATCCATGAAGCTTCCATCTGTAGGTTCCACCCTTACATCATC | + |
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Preference number: 1 (lower is better) Translates to: HSNIGIKRSLFGKFN*IHEASICRFHPYII Trigger: GATGATGTAAGGGTGGAACCTACAGATGGAAGCTTCATGGATGCAATTGAATTTGCCAAAAAGGGAGCGTTTGATGCCTATGTTGCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027044.15 ENSMUST00000130927.8 ENSMUST00000186467.2 |
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| 3UTR TCA 90 bp | ACCGTGGAGCAGTACAGGAAAGACATTACTCACAGGCTCTACATCTaGAAGTCAACCAATTCCAAATTGAAAAAGTTTTCACAAATTTCC | + |
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Preference number: 1 (lower is better) Translates to: TVEQYRKDITHRLYI*KSTNSKLKKFSQIS Trigger: GGAAATTTGTGAAAACTTTTTCAATTTGGAATTGGTTGACTTTCAGATGTAGAGCCTGTGAGTAATGTCTTTCCTGTACTGCTCCACGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| 3UTR GCA 90 bp | TTTCCCTTTACTCAAGTACGTTTTATAAATTGGTTTGAGTTAGTCTaGCCTATGCAGATTGATCTGCCAGGCAATATAGTCATCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: FPFTQVRFINWFELV*PMQIDLPGNIVISP Trigger: TGGAGAGATGACTATATTGCCTGGCAGATCAATCTGCATAGGGCAGACTAACTCAAACCAATTTATAAAACGTACTTGAGTAAAGGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| 3UTR CAA 90 bp | GCGGTGTATGACTCCAGAGCATGGCAAAGGACATCGAAGCCACTGTaGGCAACCACCTGGCAAGGCATGTGGAGAGTGTGCAGGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: AVYDSRAWQRTSKPL*ATTWQGMWRVCRGS Trigger: TGATCCCCTGCACACTCTCCACATGCCTTGCCAGGTGGTTGCCAACAGTGGCTTCGATGTCCTTTGCCATGCTCTGGAGTCATACACCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR-3UTR TCA 90 bp | TATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCCTGCCTCCACCTCACTaGATGTCAGCTGAAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: YATVLALQCLVPQQVAASLPPPH*MSAEGR Trigger: TCTGCCTTCAGCTGACATTCAGTGAGGTGGAGGCAG...GCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| 3UTR-3UTR CCA 90 bp | ATCGAAGCCACTGTTGGCAACCACCTGGCAAGGCATGTGGAGAGTGTGCAGGGGACTCAGAGTGAGGGCTaGATGCATACAGATTGGCGG | + |
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Preference number: 2 (lower is better) Translates to: IEATVGNHLARHVESVQGTQSEG*MHTDWR Trigger: CCGCCAATCTGTATGCATCCAGCCCTCACTCTGAGT...CCCCTGCACACTCTCCACATGCCTTGCCAGGTGGTTGCCAACAGTGGCTTCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR-3UTR GCA 90 bp | TACAGGAATACTGACCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCCCTGCACAGCAATCCTaGACTAGCTGCCATTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: YRNTDPWGMAHGFHVMSTPAQQS*TSCHCL Trigger: CAAGCAATGGCAGCTAGTGCAGGATTGCTGTGCAGG...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGGTCAGTATTCCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTCAGCTGAAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTCCAAGATGGCTGCCTaGAAATCAGCCAACTGGACG | + |
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Preference number: 2 (lower is better) Translates to: MSAEGRRGGKGEVFYAVASKMAA*KSANWT Trigger: CGTCCAGTTGGCTGATTTGCAGGCAGCCATCTTGGA...AGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCATCAAGTAGATGTGTAGCCACATCCTGCTGGAGCCTCCTGCCCTGCACACGGCAACATCAGCTCTaGCCAACTTCTGCTATTTGT | + |
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Preference number: 2 (lower is better) Translates to: CPSSRCVATSCWSLLPCTRQHQL*PTSAIC Trigger: ACAAATAGCAGAAGTTGGCCAGAGCTGATGTTGCCG...TGTGCAGGGCAGGAGGCTCCAGCAGGATGTGGCTACACATCTACTTGATGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| 3UTR CAA 90 bp | GGCATGTGGAGAGTGTGCAGGGGATCAACCAGTCCCAGGGTGGGTTaGATGGCTCGTGAAGCAATGCCAGTTTTTACTTTCAAATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GMWRVCRGSTSPRVG*MAREAMPVFTFKCS Trigger: TGAGCATTTGAAAGTAAAAACTGGCATTGCTTCACGAGCCATCAAACCCACCCTGGGACTGGTTGATCCCCTGCACACTCTCCACATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGATCCTGGCAGTGCGGATGTTGGCTCCTAATATTCCTGCCGTCTCCAGGGCCAGCAAAAGCACTTaGCAAGTGCATTTTAGACCT | + |
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Preference number: 2 (lower is better) Translates to: SWILAVRMLAPNIPAVSRASKST*QVHFRP Trigger: AGGTCTAAAATGCACTTGGCAAGTGCTTTTGCTGGC...CCTGGAGACGGCAGGAATATTAGGAGCCAACATCCGCACTGCCAGGATCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR-3UTR GCA 90 bp | TGTCCATCAAGTAGATGTGTAGCCACATCCTGCTGGAGCCTCCTGCCCTGCACATCATGTGTGTTTGTGTaGGCATGTAGAGATCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CPSSRCVATSCWSLLPCTSCVFV*ACRDQR Trigger: CCTCTGATCTCTACATGCGCACACAAACACACATGA...TGTGCAGGGCAGGAGGCTCCAGCAGGATGTGGCTACACATCTACTTGATGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCACTTGCCAAGTGCATTTTAGACCTTGCTTCCAGATCATCTGGGTTTCTGATGCTGGTCGTTGGATaGGGTTGGAAGGGCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: KALAKCILDLASRSSGFLMLVVG*GWKGRG Trigger: GCCCCTGCCCTTCCAACCCCATCCAACGACCAGCAT...CAGAAACCCAGATGATCTGGAAGCAAGGTCTAAAATGCACTTGGCAAGTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| 3UTR-3UTR GCA 90 bp | GTACAGGAAAGACATTACTCACAGGCTCTACATCTGAAAGTCAACCAATTCCAATGTGTAGCCACATCCTaGTGGAGCCTCCTGCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: VQERHYSQALHLKVNQFQCVATS*WSLLPC Trigger: GCAGGGCAGGAGGCTCCAGCAGGATGTGGCTACACA...TTGGAATTGGTTGACTTTCAGATGTAGAGCCTGTGAGTAATGTCTTTCCTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| 3UTR-3UTR GCA 90 bp | AATTGGTTTGAGTTAGTCTGCCCTATGCAGATTGATCTGCCAGGCAATATAGTCCTCTACAGTGTCTTGTaGCCCAGCAGGTCGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: NWFELVCPMQIDLPGNIVLYSVL*PSRSLP Trigger: TGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAG...GACTATATTGCCTGGCAGATCAATCTGCATAGGGCAGACTAACTCAAACCAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGGAATACTGACCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCTACTTGCCTAATGTGTaGAAGATCCTGGGTTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: YRNTDPWGMAHGFHVMSTYLPNV*KILGSN Trigger: ATTAGAACCCAGGATCTTGCACACATTAGGCAAGTA...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGGTCAGTATTCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATACTGCCTGCTGGAGCCTCCTaGCCTGCACAGCAATCCTGC | + |
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Preference number: 2 (lower is better) Translates to: CLEIGIFMYLMGFGTGILPAGAS*PAQQSC Trigger: GCAGGATTGCTGTGCAGGGCAGGAGGCTCCAGCAGG...CAGTATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| 3UTR-3UTR GCA 90 bp | ATACCCACATATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGGGAGAAGTTTTCTATaGTGTGGCTTGTTCCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: IPTYATVLALQCLVPQQVGRSFL*CGLFQD Trigger: ATCTTGGAACAAGCCACAGCATAGAAAACTTCTCCC...GACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATATGTGGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| 3UTR-3UTR CCA 90 bp | AATTGGTTTGAGTTAGTCTGCCCTATGCAGATTGATCTGCCAGGCAATATAGTCAGTGTAACACTGCCCTaGGGTATGGCCCATGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: NWFELVCPMQIDLPGNIVSVTLP*GMAHGF Trigger: GAACCCATGGGCCATACCCCAGGGCAGTGTTACACT...GACTATATTGCCTGGCAGATCAATCTGCATAGGGCAGACTAACTCAAACCAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGGTCAAATAGGAATTTTCGGAGGGCATCTGCCAACACAAGCCCAGCATCTTAAAGCACTTGCCAAGTaGATTTTAGACCTTGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LGQIGIFGGHLPTQAQHLKALAK*ILDLAS Trigger: GGAAGCAAGGTCTAAAATGCACTTGGCAAGTGCTTT...AAGATGCTGGGCTTGTGTTGGCAGATGCCCTCCGAAAATTCCTATTTGACCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATACTGACCTGGCAAGGCATGTaGAGAGTGTGCAGGGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: CLEIGIFMYLMGFGTGILTWQGM*RVCRGS Trigger: TGATCCCCTGCACACTCTCCACATGCCTTGCCAGGT...CAGTATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR-3UTR GCA 90 bp | GGTAGTTGGAACTGCAATCAGAGGTTTAAGAGGCACAGTTACTGGCTTCCCCTTTTTGGCAAATTCAATTaGATCCATGAAGCTTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: GSWNCNQRFKRHSYWLPLFGKFN*IHEASI Trigger: GATGGAAGCTTCATGGATGCAATTGAATTTGCCAAA...AAGGGGAAGCCAGTAACTGTGCCTCTTAAACCTCTGATTGCAGTTCCAACTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
||
| 3UTR-3UTR TCA 90 bp | GTACAGGAAAGACATTACTCACAGGCTCTACATCTGAAAGTCAACCAATTCCAAGATATGGCTCACAGGTaGTTGTGTGTGTGTAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: VQERHYSQALHLKVNQFQDMAHR*LCVCSM Trigger: CATACTACACACACACAATCACCTGTGAGCCATATC...TTGGAATTGGTTGACTTTCAGATGTAGAGCCTGTGAGTAATGTCTTTCCTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATCAAACCAGCAATAGGTaGGTTAAGTGTGGAGATAAG | + |
|
Preference number: 2 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNQTSNR*VKCGDK Trigger: CTTATCTCCACACTTAACTCACCTATTGCTGGTTTG...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATACTGTACCTACCACCACAGTaGCAAGTTTACAGATGTACA | + |
|
Preference number: 2 (lower is better) Translates to: CLEIGIFMYLMGFGTGILYLPPQ*QVYRCT Trigger: TGTACATCTGTAAACTTGGCACTGTGGTGGTAGGTA...CAGTATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR CAA 90 bp | CTAATGCTAGTATTTCTTCAGGGTAAATGTCTAGACATGCAGTGTTaGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LMLVFLQGKCLDMQC*EIGIFMYLMGFGTG Trigger: TCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACACTGCATGTCTAGACATTTACCCTGAAGAAATACTAGCATTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000144177.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATACTGATCTTCACATATGGATaGCAAGCACTTTGCCTACTA | + |
|
Preference number: 2 (lower is better) Translates to: CLEIGIFMYLMGFGTGILIFTYG*QALCLL Trigger: TAGTAGGCAAAGTGCTTGCCATCCATATGTGAAGAT...CAGTATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR CCA 72 bp | TCGCTGATTGGGTTGCTACCCTGGTATGCTGGTCGTTaGATGGGGTTGGAAGGGCAGGGGCTCCGCATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLIGLLPWYAGR*MGLEGQGLRML Trigger: CAGCATGCGGAGCCCCTGCCCTTCCAACCCCATCCAACGACCAGCATACCAGGGTAGCAACCCAATCAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR GCA 72 bp | TGCCCAGATGTCGCTGATTGGGTTGCTACCCTGGTATaGTGGTCGTTGGATGGGGTTGGAAGGGCAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CPDVADWVATLV*WSLDGVGRAGA Trigger: AGCCCCTGCCCTTCCAACCCCATCCAACGACCAGCATACCAGGGTAGCAACCCAATCAGCGACATCTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR TCA 72 bp | GCAGGGGCTCCGCATGCTGTAGGGAATGGCGGTGTATaGCTCCAGAGCATGGCAAAGGACATCGAAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: AGAPHAVGNGGV*LQSMAKDIEAT Trigger: AGTGGCTTCGATGTCCTTTGCCATGCTCTGGAGTCATACACCGCCATTCCCTACAGCATGCGGAGCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR CCA 72 bp | TGGACTGCCCAGATGTCGCTGATTGGGTTGCTACCCTaGTATGCTGGTCGTTGGATGGGGTTGGAAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: WTAQMSLIGLLP*YAGRWMGLEGQ Trigger: CTGCCCTTCCAACCCCATCCAACGACCAGCATACCAGGGTAGCAACCCAATCAGCGACATCTGGGCAGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR CCA 72 bp | CAAGCCCAGCATCTTGGATCCTGGCAGTGCGGATGTTaGCTCCTAATATTCCTGCCGTCTCCAGGTGCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: QAQHLGSWQCGC*LLIFLPSPGAA Trigger: AGCGGCACCTGGAGACGGCAGGAATATTAGGAGCCAACATCCGCACTGCCAGGATCCAAGATGCTGGGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR TCA 72 bp | TTCTGCCATCTCAACTTGGCGCTGCCTCCACCTCACTaGATGTCAGCTGAAGGCAGACGTGGTGGCAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FCHLNLALPPPH*MSAEGRRGGKG Trigger: TCCCTTGCCACCACGTCTGCCTTCAGCTGACATTCAGTGAGGTGGAGGCAGCGCCAAGTTGAGATGGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR CCA 72 bp | CAAGGAACTCAGAGTGAGGGCTGGATGCATACAGATTaGCGGCTTTACAGGTGTCCATGGTGGAGCCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QGTQSEGWMHTD*RLYRCPWWSPH Trigger: GTGGGGGCTCCACCATGGACACCTGTAAAGCCGCCAATCTGTATGCATCCAGCCCTCACTCTGAGTTCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
||
| 3UTR CCA 72 bp | TGGCAAAGGACATCGAAGCCACTGTTGGCAACCACCTaGCAAGGCATGTGGAGAGTGTGCAGGGGATCAACC | + |
|
Preference number: 3 (lower is better) Translates to: WQRTSKPLLATT*QGMWRVCRGST Trigger: GGTTGATCCCCTGCACACTCTCCACATGCCTTGCCAGGTGGTTGCCAACAGTGGCTTCGATGTCCTTTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR CCA 72 bp | GGGCATCTGCCAACACAAGCCCAGCATCTTGGATCCTaGCAGTGCGGATGTTGGCTCCTAATATTCCTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: GHLPTQAQHLGS*QCGCWLLIFLP Trigger: CGGCAGGAATATTAGGAGCCAACATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGTGTTGGCAGATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR GCA 72 bp | CTGCCAACACAAGCCCAGCATCTTGGATCCTGGCAGTaGGGATGTTGGCTCCTAATATTCCTGCCGTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPTQAQHLGSWQ*GCWLLIFLPSP Trigger: TGGAGACGGCAGGAATATTAGGAGCCAACATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGTGTTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR CCA 72 bp | ACTCCAGAGCATGGCAAAGGACATCGAAGCCACTGTTaGCAACCACCTGGCAAGGCATGTGGAGAGTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TPEHGKGHRSHC*QPPGKACGECA Trigger: TGCACACTCTCCACATGCCTTGCCAGGTGGTTGCCAACAGTGGCTTCGATGTCCTTTGCCATGCTCTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR TCA 72 bp | CAACTTGGCGCTGCCTCCACCTCACTGAATGTCAGCTaGAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: QLGAASTSLNVS*RQTWWQGRSFL Trigger: TAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTGACATTCAGTGAGGTGGAGGCAGCGCCAAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR GCA 72 bp | CCACATATGCGACTGTTCTTGCTCTACAGTGTCTTGTaGCCCAGCAGGTCGCTGCCAGCAAGAAGACCATCA | + |
|
Preference number: 3 (lower is better) Translates to: PHMRLFLLYSVL*PSRSLPARRPS Trigger: TGATGGTCTTCTTGCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR CCA 72 bp | TGGATGCATACAGATTGGCGGCTTTACAGGTGTCCATaGTGGAGCCCCCACCCACAGCAACATAGGCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: WMHTDWRLYRCP*WSPHPQQHRHQ Trigger: TTGATGCCTATGTTGCTGTGGGTGGGGGCTCCACCATGGACACCTGTAAAGCCGCCAATCTGTATGCATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
||
| 3UTR TCA 72 bp | ACAGAATCTCTCGATGAATCTCAACTGGCTGACCAGTaGGCCCTGGGGTTCTGCTTGTCTCTACCTACCACC | + |
|
Preference number: 3 (lower is better) Translates to: TESLDESQLADQ*ALGFCLSLPTT Trigger: GGTGGTAGGTAGAGACAAGCAGAACCCCAGGGCTCACTGGTCAGCCAGTTGAGATTCATCGAGAGATTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR GCA 72 bp | AAGATCTCACCTGATACCCACATATGCGACTGTTCTTaGTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KISPDTHICDCS*STVSCAPAGRC Trigger: GCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATATGTGGGTATCAGGTGAGATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR CCA 72 bp | TTTCGGAGGGCATCTGCCAACACAAGCCCAGCATCTTaGATCCTGGCAGTGCGGATGTTGGCTCCTAATATT | + |
|
Preference number: 3 (lower is better) Translates to: FRRASANTSPAS*ILAVRMLAPNI Trigger: AATATTAGGAGCCAACATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGTGTTGGCAGATGCCCTCCGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR CCA 72 bp | GCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTaGCTTGTTCCAAGATGGCTGCCTGCAAATCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ADVVAREKFSML*LVPRWLPANQP Trigger: TGGCTGATTTGCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGAATACTGACCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCCTGCCATTGCTTGCCTaGAGTCTTGTGAAGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: YRNTDPWGMAHGFHVMSTLPLLA*SLVKCC Trigger: ACAGCACTTCACAAGACTCAAGGCAAGCAATGGCAG...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGGTCAGTATTCCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGTGAGGGCTGGATGCATACAGATTGGCGGCTTTACAGGTGTCCATGGTGGAATCCATAACTATTaGTACAGGAGGGAGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LRVRAGCIQIGGFTGVHGGIHNY*YRRELG Trigger: TCCCAGCTCCCTCCTGTACAAATAGTTATGGATTCC...ACCATGGACACCTGTAAAGCCGCCAATCTGTATGCATCCAGCCCTCACTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
||
| 3UTR TCA 72 bp | GAGTGTGCAGGGGATCAACCAGTCCCAGGGTGGGTTTaGTGGCTCGTGAAGCAATGCCAGTTTTTACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ECAGDQPVPGWV*WLVKQCQFLLS Trigger: TGAAAGTAAAAACTGGCATTGCTTCACGAGCCATCAAACCCACCCTGGGACTGGTTGATCCCCTGCACACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR CCA 72 bp | GTATTTGATGGGGTTTGGTACAGGAATACTGACCCCTaGGGTATGGCCCATGGGTTCCATGTAATGAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: VFDGVWYRNTDP*GMAHGFHVMST Trigger: GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGGTCAGTATTCCTGTACCAAACCCCATCAAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000144177.8 |
||
| 3UTR TCA 72 bp | AAAAATGGCAACCCCGGTAGTCTCACTGCCAGTCCCTaGGGTAGTTGGAACTGCAATCAGAGGTTTAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KNGNPGSLTASP*GSWNCNQRFKR Trigger: CCTCTTAAACCTCTGATTGCAGTTCCAACTACCTCAGGGACTGGCAGTGAGACTACCGGGGTTGCCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR TCA 72 bp | CGTGACCCTTTCCTGGGGCAGTGTTCCTTTCACCAATaGAGGAATGTCATCCTTGGAATAACCAAGAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RDPFLGQCSFHQ*RNVILGITKSS Trigger: GCTGCTCTTGGTTATTCCAAGGATGACATTCCTTCATTGGTGAAAGGAACACTGCCCCAGGAAAGGGTCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR GCA 72 bp | CTTCAGATATTTGGCAACAATCTGCAGTGCATGGACTaGCCAGATGTCGCTGATTGGGTTGCTACCCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LQIFGNNLQCMD*PDVADWVATLV Trigger: TACCAGGGTAGCAACCCAATCAGCGACATCTGGGCAGTCCATGCACTGCAGATTGTTGCCAAATATCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR GCA 72 bp | AGCAAGAAGACCATCACCAGAGGTAGCTATAGTCCCTaGATCTCCAGAGCTCTGCTTCTGCCATCTCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: SKKTITRGSYSP*ISRALLLPSQL Trigger: AAGTTGAGATGGCAGAAGCAGAGCTCTGGAGATGCAGGGACTATAGCTACCTCTGGTGATGGTCTTCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR GCA 72 bp | AACACACAGGGGAAGATCTCACCTGATACCCACATATaGGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: NTQGKISPDTHI*DCSCSTVSCAP Trigger: TGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATATGTGGGTATCAGGTGAGATCTTCCCCTGTGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR CCA 72 bp | AGGGAGAAGTTTTCTATGCTGTGGCTTGTTCCAAGATaGCTGCCTGCAAATCAGCCAACTGGACGAGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: REKFSMLWLVPR*LPANQPTGRGY Trigger: GTATCCTCGTCCAGTTGGCTGATTTGCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR-3UTR CAA 90 bp | TACAGGAATACTGACCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCTCAGTGGTAGATTACTaGCCTAATGTGTGCAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: YRNTDPWGMAHGFHVMSTSVVDY*PNVCKI Trigger: GATCTTGCACACATTAGGCAAGTAATCTACCACTGA...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGGTCAGTATTCCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR GCA 72 bp | GCCAGCAAAAGCACTTGCCAAGTGCATTTTAGACCTTaGTTCCAGATCATCTGGGTTTCTGACAGCCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ASKSTCQVHFRP*FQIIWVSDSPL Trigger: AAGAGGGCTGTCAGAAACCCAGATGATCTGGAAGCAAGGTCTAAAATGCACTTGGCAAGTGCTTTTGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR CCA 72 bp | TGGAACTGCAATCAGAGGTTTAAGAGGCACAGTTACTaGCTTCCCCTTCCCAATGGGGGCATTGACATAATC | + |
|
Preference number: 3 (lower is better) Translates to: WNCNQRFKRHSY*LPLPNGGIDII Trigger: GATTATGTCAATGCCCCCATTGGGAAGGGGAAGCCAGTAACTGTGCCTCTTAAACCTCTGATTGCAGTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
||
| 3UTR CCA 72 bp | CACAGTGCCAAGTTTACAGATGTACAAAGCTGTGGCTaGCATTTACATGGATGTGAGGGGAGGATCCGAACT | + |
|
Preference number: 3 (lower is better) Translates to: HSAKFTDVQSCG*HLHGCEGRIRT Trigger: AGTTCGGATCCTCCCCTCACATCCATGTAAATGCCAGCCACAGCTTTGTACATCTGTAAACTTGGCACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCACCCACAGCAACATAGGCATCAAACGCTCCCTTTTTGGCAAATTCAATTGCGGAATCCATAACTATTaGTACAGGAGGGAGCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PTHSNIGIKRSLFGKFNCGIHNY*YRRELG Trigger: TCCCAGCTCCCTCCTGTACAAATAGTTATGGATTCC...GCAATTGAATTTGCCAAAAAGGGAGCGTTTGATGCCTATGTTGCTGTGGGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027044.15 ENSMUST00000130927.8 ENSMUST00000186467.2 |
||
| 3UTR GCA 72 bp | ACCAGCATTTCCGAAGCCAATGCCAGCAAAAGCACTTaGCAAGTGCATTTTAGACCTTGCTTCCAGATCATC | + |
|
Preference number: 3 (lower is better) Translates to: TSISEANASKST*QVHFRPCFQII Trigger: GATGATCTGGAAGCAAGGTCTAAAATGCACTTGGCAAGTGCTTTTGCTGGCATTGGCTTCGGAAATGCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| 3UTR GCA 72 bp | TATAAAATACAAAATGGGAGACCAGGTGAGGCATGGTaGATAATCTCAGCGCTGGGAAGACAGAGGCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: YKIQNGRPGEAW*IISALGRQRQK Trigger: CTTCTGCCTCTGTCTTCCCAGCGCTGAGATTATGCACCATGCCTCACCTGGTCTCCCATTTTGTATTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR GCA 72 bp | CGAACTCAAATCTTCACATATGGATGGCAAGCACTTTaGCTACTAAGTCATCATCCCAACCCTGCCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: RTQIFTYGWQAL*LLSHHPNPAFP Trigger: GGGAAAGGCAGGGTTGGGATGATGACTTAGTAGGCAAAGTGCTTGCCATCCATATGTGAAGATTTGAGTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR GCA 72 bp | AGAAGTTTTCTATGCTGTGGCTTGTTCCAAGATGGCTaGCTGCAAATCAGCCAACTGGACGAGGATACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: RSFLCCGLFQDG*LQISQLDEDTL Trigger: TAAGGTATCCTCGTCCAGTTGGCTGATTTGCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR CCA 72 bp | ATGTATAAAATACAAAATGGGAGACCAGGTGAGGCATaGTGCATAATCTCAGCGCTGGGAAGACAGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MYKIQNGRPGEA*CIISALGRQRQ Trigger: CTGCCTCTGTCTTCCCAGCGCTGAGATTATGCACCATGCCTCACCTGGTCTCCCATTTTGTATTTTATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR CCA 72 bp | GAGGGGAGGATCCGAACTCAAATCTTCACATATGGATaGCAAGCACTTTGCCTACTAAGTCATCATCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: EGRIRTQIFTYG*QALCLLSHHPN Trigger: GTTGGGATGATGACTTAGTAGGCAAAGTGCTTGCCATCCATATGTGAAGATTTGAGTTCGGATCCTCCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR TCA 72 bp | GCTGTTCGTAGGGTAAATGGTGATATGGCTCACAGGTaGTTGTGTGTGTGTAGTATGATGTGTTCATGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AVRRVNGDMAHR*LCVCSMMCSCV Trigger: CACACATGAACACATCATACTACACACACACAATCACCTGTGAGCCATATCACCATTTACCCTACGAACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR GCA 72 bp | ATAGGCATCAAACGCTCCCTTTTTGGCAAATTCAATTaGATCCATGAAGCTTCCATCTGTAGGTTCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: IGIKRSLFGKFN*IHEASICRFHP Trigger: AGGGTGGAACCTACAGATGGAAGCTTCATGGATGCAATTGAATTTGCCAAAAAGGGAGCGTTTGATGCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027044.15 ENSMUST00000130927.8 ENSMUST00000186467.2 |
||
| 3UTR CCA 72 bp | GAGTTAAGTGTGGAGATAAGACGGCAACATCAGCTCTaGCCAACTTCTGCTATTTGTAACTTCTGTCGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ELSVEIRRQHQL*PTSAICNFCRK Trigger: TTTGCGACAGAAGTTACAAATAGCAGAAGTTGGCCAGAGCTGATGTTGCCGTCTTATCTCCACACTTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027044.15 ENSMUST00000144177.8 ENSMUST00000190654.2 |
||
| 3UTR TCA 72 bp | AATTCAAAACCAGCCTTAAACCGAAGACATGCAGAGTaGCTCTACCTTAAAACCCAAGAGCTGAGAATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NSKPALNRRHAE*LYLKTQELRMW Trigger: CCACATTCTCAGCTCTTGGGTTTTAAGGTAGAGTCACTCTGCATGTCTTCGGTTTAAGGCTGGTTTTGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR TCA 72 bp | TCATCTCTCCATCTCTATGCATTCTGTAGATTCGAGTaGGCACACATCAAAAACACACAGGGGAAGATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLHLYAFCRFE*AHIKNTQGKIS Trigger: TGAGATCTTCCCCTGTGTGTTTTTGATGTGTGCTCACTCGAATCTACAGAATGCATAGAGATGGAGAGATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR GCA 72 bp | GAATGTGGCTCAGTGGTAGATTACTTGCCTAATGTGTaGAAGATCCTGGGTTCTAATTTCAGCACCTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ECGSVVDYLPNV*KILGSNFSTLK Trigger: TTTTAAGGTGCTGAAATTAGAACCCAGGATCTTGCACACATTAGGCAAGTAATCTACCACTGAGCCACATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR TCA 72 bp | AGGATAAAATCACATCACATTCAAACCAGCAATAGGTaGGTTAAGTGTGGAGATAAGACGGCAACATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RIKSHHIQTSNR*VKCGDKTATSA Trigger: AGCTGATGTTGCCGTCTTATCTCCACACTTAACTCACCTATTGCTGGTTTGAATGTGATGTGATTTTATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027044.15 ENSMUST00000144177.8 ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTCCAGAGCTCTGCTTCTGCCATCTCAACTTGGCGCTGCCTCCACCTCACACCTGGCAAGGCATGTaGAGAGTGTGCAGGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: ASPELCFCHLNLALPPPHTWQGM*RVCRGS Trigger: TGATCCCCTGCACACTCTCCACATGCCTTGCCAGGT...GTGAGGTGGAGGCAGCGCCAAGTTGAGATGGCAGAAGCAGAGCTCTGGAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTCCAGAGCTCTGCTTCTGCCATCTCAACTTGGCGCTGCCTCCACCTCACACAAGCCCAGCATCTTaGATCCTGGCAGTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASPELCFCHLNLALPPPHTSPAS*ILAVRM Trigger: CATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGT...GTGAGGTGGAGGCAGCGCCAAGTTGAGATGGCAGAAGCAGAGCTCTGGAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR CAA 72 bp | ACAAGCCCAGCATCTTGGATCCTGGCAGTGCGGATGTaGGCTCCTAATATTCCTGCCGTCTCCAGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSPASWILAVRM*APNIPAVSRCR Trigger: GCGGCACCTGGAGACGGCAGGAATATTAGGAGCCAACATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| CDS-3UTR CCA 90 bp | AGCTATAGTCCCTGCATCTCCAGAGCTCTGCTTCTGCCATCTCAACTTGGCGCTATGCTGGTCGTTGGATaGGGTTGGAAGGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SYSPCISRALLLPSQLGAMLVVG*GWKGRG Trigger: GCCCCTGCCCTTCCAACCCCATCCAACGACCAGCAT...AGCGCCAAGTTGAGATGGCAGAAGCAGAGCTCTGGAGATGCAGGGACTATAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR CAA 72 bp | GACTCCAGAGCATGGCAAAGGACATCGAAGCCACTGTaGGCAACCACCTGGCAAGGCATGTGGAGAGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSRAWQRTSKPL*ATTWQGMWRVC Trigger: GCACACTCTCCACATGCCTTGCCAGGTGGTTGCCAACAGTGGCTTCGATGTCCTTTGCCATGCTCTGGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| CDS-3UTR TCA 90 bp | CAGGTCGCTGCCAGCAAGAAGACCATCACCAGAGGTAGCTATAGTCCCTGCATCAGACAAATCCTCTTCTaGCTGGGCACGAGGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVAASKKTITRGSYSPCIRQILF*LGTRCE Trigger: CTCGCACCTCGTGCCCAGTCAGAAGAGGATTTGTCT...GATGCAGGGACTATAGCTACCTCTGGTGATGGTCTTCTTGCTGGCAGCGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | GCCATCTCAACTTGGCGCTGCCTCCACCTCACTGAATGTCAGCTGAAGGCAGACTGTGAAGGTGAACACTaGAGGAGAGGTGAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AISTWRCLHLTECQLKADCEGEH*RRGEHH Trigger: GTGGTGCTCACCTCTCCTGCAGTGTTCACCTTCACA...GTCTGCCTTCAGCTGACATTCAGTGAGGTGGAGGCAGCGCCAAGTTGAGATGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | CAGCTGAAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTGTTCCTGCCGTCTCCAGGTaGCGCTCTGGAAACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLKADVVAREKFSMLWLVPAVSR*RSGNIW Trigger: CCAGATGTTTCCAGAGCGGCACCTGGAGACGGCAGG...AACAAGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | TACAGGAATACTGACCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCCTTTACAGGTGTCCATaGTGGAGCCCCCACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YRNTDPWGMAHGFHVMSTLYRCP*WSPHPQ Trigger: CTGTGGGTGGGGGCTCCACCATGGACACCTGTAAAG...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGGTCAGTATTCCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGTGTAACACTGCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCCAGCATCTTGGATCCTaGCAGTGCGGATGTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSVTLPWGMAHGFHVMSTQHLGS*QCGCWL Trigger: GAGCCAACATCCGCACTGCCAGGATCCAAGATGCTG...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGCAGTGTTACACTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR TCA 90 bp | TCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCAAGAAGACCATCACCAGTCAAGGAACTCAGAGTaGGGGCTGGATGCATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: STVSCAPAGRCQQEDHHQSRNSE*GLDAYR Trigger: TCTGTATGCATCCAGCCCTCACTCTGAGTTCCTTGA...CTGGTGATGGTCTTCTTGCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR TCA 90 bp | GCCATCTCAACTTGGCGCTGCCTCCACCTCACTGAATGTCAGCTGAAGGCAGACATGCCATGGCACAGATaGACACCAGCATTTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AISTWRCLHLTECQLKADMPWHR*TPAFPK Trigger: CTTCGGAAATGCTGGTGTTCATCTGTGCCATGGCAT...GTCTGCCTTCAGCTGACATTCAGTGAGGTGGAGGCAGCGCCAAGTTGAGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR TCA 90 bp | TACAGGAATACTGACCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCACACTGCAGGAGAGGTaGGCACCACAGAAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YRNTDPWGMAHGFHVMSTTLQER*APQKGH Trigger: ATGGCCTTTCTGTGGTGCTCACCTCTCCTGCAGTGT...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGGTCAGTATTCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | TATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCAGAGTGAGGGCTGGATaGATACAGATTGGCGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YATVLALQCLVPQQVAASRVRAG*IQIGGF Trigger: AAAGCCGCCAATCTGTATGCATCCAGCCCTCACTCT...GCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | ATACCCACATATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGGCATGTGGAGAGTGTaGAGGGGATCAACCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPTYATVLALQCLVPQQVGMWRV*RGSTSP Trigger: GGGACTGGTTGATCCCCTGCACACTCTCCACATGCC...GACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATATGTGGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | ATACCCACATATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCCTTTACAGGTGTCCATaGTGGAGCCCCCACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IPTYATVLALQCLVPQQVLYRCP*WSPHPQ Trigger: CTGTGGGTGGGGGCTCCACCATGGACACCTGTAAAG...GACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATATGTGGGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCATCAAGTAGATGTGTAGCCACATCCTGCTGGAGCCTCCTGCCCTGCACAAAGAGGCACAGTTACTaGCTTCCCCTTCCCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSSRCVATSCWSLLPCTKRHSY*LPLPNG Trigger: CCCATTGGGAAGGGGAAGCCAGTAACTGTGCCTCTT...TGTGCAGGGCAGGAGGCTCCAGCAGGATGTGGCTACACATCTACTTGATGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | GACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCAAGAAAAGAGGCACAGTTACTaGCTTCCCCTTCCCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: DCSCSTVSCAPAGRCQQEKRHSY*LPLPNG Trigger: CCCATTGGGAAGGGGAAGCCAGTAACTGTGCCTCTT...TTCTTGCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | TACAGGAATACTGACCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCACAAGCCCAGCATCTTaGATCCTGGCAGTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YRNTDPWGMAHGFHVMSTTSPAS*ILAVRM Trigger: CATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGT...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGGTCAGTATTCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGTGTAACACTGCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCTTCGTGACCCTTTCCTaGGGCAGTGTTCCTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GSVTLPWGMAHGFHVMSTFVTLS*GSVPFT Trigger: GGTGAAAGGAACACTGCCCCAGGAAAGGGTCACGAA...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGCAGTGTTACACTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| 3UTR CAA 72 bp | TACCCACATATGCGACTGTTCTTGCTCTACAGTGTCTaGTGCCCCAGCAGGTCGCTGCCAGCAAGAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: YPHMRLFLLYSV*CPSRSLPARRP Trigger: TGGTCTTCTTGCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATATGTGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR TCA 90 bp | TATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCTGGGGCACAAGAGGGTaGTCCACATTATATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YATVLALQCLVPQQVAASWGTRG*STLYSL Trigger: CAAGGAATATAATGTGGATCACCCTCTTGTGCCCCA...GCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR TCA 90 bp | ATACCCACATATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCACACTGCAGGAGAGGTaGGCACCACAGAAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPTYATVLALQCLVPQQVTLQER*APQKGH Trigger: ATGGCCTTTCTGTGGTGCTCACCTCTCCTGCAGTGT...GACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATATGTGGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | TATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCTGGATGCATACAGATTaGCGGCTTTACAGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YATVLALQCLVPQQVAASWMHTD*RLYRCP Trigger: TGGACACCTGTAAAGCCGCCAATCTGTATGCATCCA...GCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | AGCTATAGTCCCTGCATCTCCAGAGCTCTGCTTCTGCCATCTCAACTTGGCGCTACTCAGAGTGAGGGCTaGATGCATACAGATTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SYSPCISRALLLPSQLGATQSEG*MHTDWR Trigger: CCGCCAATCTGTATGCATCCAGCCCTCACTCTGAGT...AGCGCCAAGTTGAGATGGCAGAAGCAGAGCTCTGGAGATGCAGGGACTATAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | TACAGGAATACTGACCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCAAATCCTCTTCTGACTaGGCACGAGGTGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRNTDPWGMAHGFHVMSTKSSSD*ARGASF Trigger: GAAGCTCGCACCTCGTGCCCAGTCAGAAGAGGATTT...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGGTCAGTATTCCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR TCA 90 bp | TATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCGATCATCTGGGTTTCTaGCAGCCCTCTTCAGATATT | + |
|
Preference number: 4 (lower is better) Translates to: YATVLALQCLVPQQVAASDHLGF*QPSSDI Trigger: AATATCTGAAGAGGGCTGTCAGAAACCCAGATGATC...GCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | TCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCAAGAAGACCATCACCAGGCCAGCAAAAGCACTTaGCAAGTGCATTTTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: STVSCAPAGRCQQEDHHQASKST*QVHFRP Trigger: AGGTCTAAAATGCACTTGGCAAGTGCTTTTGCTGGC...CTGGTGATGGTCTTCTTGCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | GCATGGTGCATAATCTCAGCGCTGGGAAGACAGAGGCAGAAGAACCCCAAATTCACTCAGAGTGAGGGCTaGATGCATACAGATTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AWCIISALGRQRQKNPKFTQSEG*MHTDWR Trigger: CCGCCAATCTGTATGCATCCAGCCCTCACTCTGAGT...GAATTTGGGGTTCTTCTGCCTCTGTCTTCCCAGCGCTGAGATTATGCACCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTGTTCCAAGATGGCTGCCTGCAAAATCCTCTTCTGACTaGGCACGAGGTGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VAREKFSMLWLVPRWLPAKSSSD*ARGASF Trigger: GAAGCTCGCACCTCGTGCCCAGTCAGAAGAGGATTT...TGCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCTCCCTTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR TCA 90 bp | TACAGGAATACTGACCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCTGGGGCACAAGAGGGTaGTCCACATTATATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YRNTDPWGMAHGFHVMSTWGTRG*STLYSL Trigger: CAAGGAATATAATGTGGATCACCCTCTTGTGCCCCA...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGGTCAGTATTCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | TATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCGTGCATTTTAGACCTTaGTTCCAGATCATCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YATVLALQCLVPQQVAASVHFRP*FQIIWV Trigger: AACCCAGATGATCTGGAAGCAAGGTCTAAAATGCAC...GCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCATCAAGTAGATGTGTAGCCACATCCTGCTGGAGCCTCCTGCCCTGCACAGCCAGCAAAAGCACTTaGCAAGTGCATTTTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: CPSSRCVATSCWSLLPCTASKST*QVHFRP Trigger: AGGTCTAAAATGCACTTGGCAAGTGCTTTTGCTGGC...TGTGCAGGGCAGGAGGCTCCAGCAGGATGTGGCTACACATCTACTTGATGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCTATAGTCCCTGCATCTCCAGAGCTCTGCTTCTGCCATCTCAACTTGGCGCATTTCCGAAGCCAATaGCAGCAAAAGCACTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VAIVPASPELCFCHLNLAHFRSQ*QQKHLP Trigger: TGGCAAGTGCTTTTGCTGGCATTGGCTTCGGAAATG...CGCCAAGTTGAGATGGCAGAAGCAGAGCTCTGGAGATGCAGGGACTATAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | ATACCCACATATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCCTTGGATCCTGGCAGTaGGGATGTTGGCTCCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: IPTYATVLALQCLVPQQVLGSWQ*GCWLLI Trigger: TATTAGGAGCCAACATCCGCACTGCCAGGATCCAAG...GACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATATGTGGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGTGTAACACTGCCCTGGGGTATGGCCCATGGGTTCCATGTAATGAGCACCAAAGCACTTGCCAAGTaGATTTTAGACCTTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSVTLPWGMAHGFHVMSTKALAK*ILDLAS Trigger: GGAAGCAAGGTCTAAAATGCACTTGGCAAGTGCTTT...GGTGCTCATTACATGGAACCCATGGGCCATACCCCAGGGCAGTGTTACACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | GAACTCAGAGTGAGGGCTGGATGCATACAGATTGGCGGCTTTACAGGTGTCCATAGTATGAGAATGAGTTaGGCACTGGCATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELRVRAGCIQIGGFTGVHSMRMS*ALACCA Trigger: AGCACAGCATGCCAGTGCCCAACTCATTCTCATACT...ATGGACACCTGTAAAGCCGCCAATCTGTATGCATCCAGCCCTCACTCTGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCAGCTGAAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTAGTATGAGAATGAGTTaGGCACTGGCATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSAEGRRGGKGEVFYAVASMRMS*ALACCA Trigger: AGCACAGCATGCCAGTGCCCAACTCATTCTCATACT...AGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTGTTCCAAGATGGCTGCCTGCATGCTTCCAGATCATCTaGGTTTCTGACAGCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VAREKFSMLWLVPRWLPACFQII*VSDSPL Trigger: AAGAGGGCTGTCAGAAACCCAGATGATCTGGAAGCA...TGCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCTCCCTTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR TCA 90 bp | TGTCCATCAAGTAGATGTGTAGCCACATCCTGCTGGAGCCTCCTGCCCTGCACATCCATATCTAATATTTaGGACAGCCATCTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPSSRCVATSCWSLLPCTSISNI*DSHLKG Trigger: GCCTTTGAGATGGCTGTCTCAAATATTAGATATGGA...TGTGCAGGGCAGGAGGCTCCAGCAGGATGTGGCTACACATCTACTTGATGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR TCA 90 bp | GACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCAAGAATCCATATCTAATATTTaGGACAGCCATCTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DCSCSTVSCAPAGRCQQESISNI*DSHLKG Trigger: GCCTTTGAGATGGCTGTCTCAAATATTAGATATGGA...TTCTTGCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | AGCTATAGTCCCTGCATCTCCAGAGCTCTGCTTCTGCCATCTCAACTTGGCGCTAAATTGGGTAAGACATaGCATGGCACAGATGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SYSPCISRALLLPSQLGAKLGKT*HGTDEH Trigger: GTGTTCATCTGTGCCATGGCATGTCTTACCCAATTT...AGCGCCAAGTTGAGATGGCAGAAGCAGAGCTCTGGAGATGCAGGGACTATAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATCCTGCCGTCTCCAGGTaGCGCTCTGGAAACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNPAVSR*RSGNIW Trigger: CCAGATGTTTCCAGAGCGGCACCTGGAGACGGCAGG...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | GTACAGGAAAGACATTACTCACAGGCTCTACATCTGAAAGTCAACCAATTCCAAATGCTGGTCGTTGGATaGGGTTGGAAGGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQERHYSQALHLKVNQFQMLVVG*GWKGRG Trigger: GCCCCTGCCCTTCCAACCCCATCCAACGACCAGCAT...TTGGAATTGGTTGACTTTCAGATGTAGAGCCTGTGAGTAATGTCTTTCCTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTGTTCCAAGATGGCTGCCTGCCCCTCTTCAGATATTTaGCAACAATCTGCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGKGEVFYAVACSKMAACPSSDI*QQSAVH Trigger: ATGCACTGCAGATTGTTGCCAAATATCTGAAGAGGG...GCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCTCCCTTGCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | GACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCAAGAAGTACAGTTTCATGGATaGTTCAAACAAAGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: DCSCSTVSCAPAGRCQQEVQFHG*FKQSRQ Trigger: TTGTCTGCTTTGTTTGAAGCATCCATGAAACTGTAC...TTCTTGCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CCA 90 bp | CCCACCCACAGCAACATAGGCATCAAACGCTCCCTTTTTGGCAAATTCAATTGCAGTATGAGAATGAGTTaGGCACTGGCATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTHSNIGIKRSLFGKFNCSMRMS*ALACCA Trigger: AGCACAGCATGCCAGTGCCCAACTCATTCTCATACT...GCAATTGAATTTGCCAAAAAGGGAGCGTTTGATGCCTATGTTGCTGTGGGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027044.15 ENSMUST00000130927.8 ENSMUST00000186467.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTGAAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTGTTAAGGAATGTCATCCTTaGAATAACCAAGAGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLKADVVAREKFSMLWLVKECHP*NNQEQP Trigger: TGGCTGCTCTTGGTTATTCCAAGGATGACATTCCTT...AACAAGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGTTTTCTATGCTGTGGCTTGTTCCAAGATGGCTGCCTGCAAATCAGCCTGTTCCTTTCACCAATaGAGGAATGTCATCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEVFYAVACSKMAACKSACSFHQ*RNVILG Trigger: TCCAAGGATGACATTCCTTCATTGGTGAAAGGAACA...GGCTGATTTGCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATAGACAAATCCTCTTCTaGCTGGGCACGAGGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNRQILF*LGTRCE Trigger: CTCGCACCTCGTGCCCAGTCAGAAGAGGATTTGTCT...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATCAGCATCTTGGATCCTaGCAGTGCGGATGTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNQHLGS*QCGCWL Trigger: GAGCCAACATCCGCACTGCCAGGATCCAAGATGCTG...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR CAA 72 bp | CCGAACTCAAATCTTCACATATGGATGGCAAGCACTTaGCCTACTAAGTCATCATCCCAACCCTGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNSNLHIWMAST*PTKSSSQPCLS Trigger: GGAAAGGCAGGGTTGGGATGATGACTTAGTAGGCAAAGTGCTTGCCATCCATATGTGAAGATTTGAGTTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCTGAAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTGTTTTGGCAAATTCAATTaGATCCATGAAGCTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SAEGRRGGKGEVFYAVACFGKFN*IHEASI Trigger: GATGGAAGCTTCATGGATGCAATTGAATTTGCCAAA...ACAAGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATACTGGGCATGTGGAGAGTGTaGAGGGGATCAACCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLEIGIFMYLMGFGTGILGMWRV*RGSTSP Trigger: GGGACTGGTTGATCCCCTGCACACTCTCCACATGCC...CAGTATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATTGTGAAGGTGAACACTaGAGGAGAGGTGAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNCEGEH*RRGEHH Trigger: GTGGTGCTCACCTCTCCTGCAGTGTTCACCTTCACA...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATACCTGGCAAGGCATGTaGAGAGTGTGCAGGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: AVFGDRHFYVFDGVWYRNTWQGM*RVCRGS Trigger: TGATCCCCTGCACACTCTCCACATGCCTTGCCAGGT...ATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | GCAAATTCAATTGCATCCATGAAGCTTCCATCTGTAGGTTCCACCCTTACATCAAGTATGAGAATGAGTTaGGCACTGGCATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ANSIASMKLPSVGSTLTSSMRMS*ALACCA Trigger: AGCACAGCATGCCAGTGCCCAACTCATTCTCATACT...TGATGTAAGGGTGGAACCTACAGATGGAAGCTTCATGGATGCAATTGAATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027044.15 ENSMUST00000130927.8 ENSMUST00000186467.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATATGCCATGGCACAGATaGACACCAGCATTTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVFGDRHFYVFDGVWYRNMPWHR*TPAFPK Trigger: CTTCGGAAATGCTGGTGTTCATCTGTGCCATGGCAT...ATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATAGAGTGAGGGCTGGATaGATACAGATTGGCGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AVFGDRHFYVFDGVWYRNRVRAG*IQIGGF Trigger: AAAGCCGCCAATCTGTATGCATCCAGCCCTCACTCT...ATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATCATTTCCGAAGCCAATaGCAGCAAAAGCACTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNHFRSQ*QQKHLP Trigger: TGGCAAGTGCTTTTGCTGGCATTGGCTTCGGAAATG...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | GTACAGGAAAGACATTACTCACAGGCTCTACATCTGAAAGTCAACCAATTCCAAAGTATGAGAATGAGTTaGGCACTGGCATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQERHYSQALHLKVNQFQSMRMS*ALACCA Trigger: AGCACAGCATGCCAGTGCCCAACTCATTCTCATACT...TTGGAATTGGTTGACTTTCAGATGTAGAGCCTGTGAGTAATGTCTTTCCTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATTGGATGCATACAGATTaGCGGCTTTACAGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNWMHTD*RLYRCP Trigger: TGGACACCTGTAAAGCCGCCAATCTGTATGCATCCA...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATTGCTTCCAGATCATCTaGGTTTCTGACAGCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNCFQII*VSDSPL Trigger: AAGAGGGCTGTCAGAAACCCAGATGATCTGGAAGCA...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCCACTTGTTTCCTGACACCAGCTTTTATGAAACAGACATATTTTCAAGATTCGTGACCCTTTCCTaGGGCAGTGTTCCTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: FCHLFPDTSFYETDIFSRFVTLS*GSVPFT Trigger: GGTGAAAGGAACACTGCCCCAGGAAAGGGTCACGAA...TCTTGAAAATATGTCTGTTTCATAAAAGCTGGTGTCAGGAAACAAGTGGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGCCACTTGTTTCCTGACACCAGCTTTTATGAAACAGACATATTTTCAAGATCAAGGAACTCAGAGTaGGGGCTGGATGCATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCHLFPDTSFYETDIFSRSRNSE*GLDAYR Trigger: TCTGTATGCATCCAGCCCTCACTCTGAGTTCCTTGA...TCTTGAAAATATGTCTGTTTCATAAAAGCTGGTGTCAGGAAACAAGTGGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATTCCCAATGGGGGCATTaGCATAATCAAGGAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVFGDRHFYVFDGVWYRNSQWGH*HNQGTQ Trigger: CTGAGTTCCTTGATTATGTCAATGCCCCCATTGGGA...ATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCACTTGTTTCCTGACACCAGCTTTTATGAAACAGACATATTTTCAAGACTTGGATCCTGGCAGTaGGGATGTTGGCTCCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: FCHLFPDTSFYETDIFSRLGSWQ*GCWLLI Trigger: TATTAGGAGCCAACATCCGCACTGCCAGGATCCAAG...TCTTGAAAATATGTCTGTTTCATAAAAGCTGGTGTCAGGAAACAAGTGGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| 3UTR CAA 72 bp | ATTCCTTGGCTTTATATGTCTTCACTAAACCTGAAATaGGGTAAGACATGCCATGGCACAGATGAACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPWLYMSSLNLK*GKTCHGTDEHQ Trigger: CTGGTGTTCATCTGTGCCATGGCATGTCTTACCCAATTTCAGGTTTAGTGAAGACATATAAAGCCAAGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
||
| CDS-3UTR TCA 90 bp | GCAGTGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATGATCATCTGGGTTTCTaGCAGCCCTCTTCAGATATT | + |
|
Preference number: 4 (lower is better) Translates to: AVFGDRHFYVFDGVWYRNDHLGF*QPSSDI Trigger: AATATCTGAAGAGGGCTGTCAGAAACCCAGATGATC...ATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR TCA 90 bp | GTACAGGAAAGACATTACTCACAGGCTCTACATCTGAAAGTCAACCAATTCCAATGTTCCTTTCACCAATaGAGGAATGTCATCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VQERHYSQALHLKVNQFQCSFHQ*RNVILG Trigger: TCCAAGGATGACATTCCTTCATTGGTGAAAGGAACA...TTGGAATTGGTTGACTTTCAGATGTAGAGCCTGTGAGTAATGTCTTTCCTGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATAAAGCACTTGCCAAGTaGATTTTAGACCTTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNKALAK*ILDLAS Trigger: GGAAGCAAGGTCTAAAATGCACTTGGCAAGTGCTTT...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATAAATTGGGTAAGACATaGCATGGCACAGATGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNKLGKT*HGTDEH Trigger: GTGTTCATCTGTGCCATGGCATGTCTTACCCAATTT...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATGTGCATTTTAGACCTTaGTTCCAGATCATCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AVFGDRHFYVFDGVWYRNVHFRP*FQIIWV Trigger: AACCCAGATGATCTGGAAGCAAGGTCTAAAATGCAC...ATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACACTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATTGGCTCGTGAAGCAATaGCAGTTTTTACTTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNWLVKQ*QFLLSN Trigger: ATTTGAAAGTAAAAACTGGCATTGCTTCACGAGCCA...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | GTACAGGAAAGACATTACTCACAGGCTCTACATCTGAAAGTCAACCAATTCCAAGTACAGTTTCATGGATaGTTCAAACAAAGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: VQERHYSQALHLKVNQFQVQFHG*FKQSRQ Trigger: TTGTCTGCTTTGTTTGAAGCATCCATGAAACTGTAC...TTGGAATTGGTTGACTTTCAGATGTAGAGCCTGTGAGTAATGTCTTTCCTGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATACTGCCCTCTTCAGATATTTaGCAACAATCTGCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLEIGIFMYLMGFGTGILPSSDI*QQSAVH Trigger: ATGCACTGCAGATTGTTGCCAAATATCTGAAGAGGG...CAGTATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATACTGAAGGAATGTCATCCTTaGAATAACCAAGAGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLEIGIFMYLMGFGTGILKECHP*NNQEQP Trigger: TGGCTGCTCTTGGTTATTCCAAGGATGACATTCCTT...CAGTATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCCACTTGTTTCCTGACACCAGCTTTTATGAAACAGACATATTTTCAAGATTTGGCAAATTCAATTaGATCCATGAAGCTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FCHLFPDTSFYETDIFSRFGKFN*IHEASI Trigger: GATGGAAGCTTCATGGATGCAATTGAATTTGCCAAA...TCTTGAAAATATGTCTGTTTCATAAAAGCTGGTGTCAGGAAACAAGTGGCAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CAA 90 bp | TACAGATTGGCGGCTTTACAGGTGTCCATGGTGGAGCCCCCACCCACAGCAACAAAGTATGAGAATGAGTaGGGCACTGGCATGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YRLAALQVSMVEPPPTATKYENE*GTGMLC Trigger: GCACAGCATGCCAGTGCCCAACTCATTCTCATACTT...TGTTGCTGTGGGTGGGGGCTCCACCATGGACACCTGTAAAGCCGCCAATCTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCATCAAGTAGATGTGTAGCCACATCCTGCTGGAGCCTCCTGCCCTGCACACGAAGGTCCAGGGGCTaGGGAGTAAGTATGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: CPSSRCVATSCWSLLPCTRRSRG*GVSMRM Trigger: CATTCTCATACTTACTCCCAAGCCCCTGGACCTTCG...TGTGCAGGGCAGGAGGCTCCAGCAGGATGTGGCTACACATCTACTTGATGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTGTTCCAAGATGGCTGCCTGCAGTCCCAGGGTGGGTTaGATGGCTCGTGAAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GGKGEVFYAVACSKMAACSPRVG*MAREAM Trigger: CATTGCTTCACGAGCCATCAAACCCACCCTGGGACT...GCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCTCCCTTGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCAGCTGAAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTCACAAGCCCAGCATCTaGGATCCTGGCAGTGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MSAEGRRGGKGEVFYAVAHKPSI*DPGSAD Trigger: ATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGTG...AGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCATCAAGTAGATGTGTAGCCACATCCTGCTGGAGCCTCCTGCCCTGCACAAAGTATGAGAATGAGTaGGGCACTGGCATGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CPSSRCVATSCWSLLPCTKYENE*GTGMLC Trigger: GCACAGCATGCCAGTGCCCAACTCATTCTCATACTT...TGTGCAGGGCAGGAGGCTCCAGCAGGATGTGGCTACACATCTACTTGATGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CAA 90 bp | TATGCGACTGTTCTTGCTCTACAGTGTCTTGTGCCCCAGCAGGTCGCTGCCAGCGGAATCCATAACTATTaGTACAGGAGGGAGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: YATVLALQCLVPQQVAASGIHNY*YRRELG Trigger: TCCCAGCTCCCTCCTGTACAAATAGTTATGGATTCC...GCTGGCAGCGACCTGCTGGGGCACAAGACACTGTAGAGCAAGAACAGTCGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTGAAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTGTTCGAAGGTCCAGGGGCTaGGGAGTAAGTATGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: QLKADVVAREKFSMLWLVRRSRG*GVSMRM Trigger: CATTCTCATACTTACTCCCAAGCCCCTGGACCTTCG...AACAAGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCATCAAGTAGATGTGTAGCCACATCCTGCTGGAGCCTCCTGCCCTGCACAGGAATCCATAACTATTaGTACAGGAGGGAGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CPSSRCVATSCWSLLPCTGIHNY*YRRELG Trigger: TCCCAGCTCCCTCCTGTACAAATAGTTATGGATTCC...TGTGCAGGGCAGGAGGCTCCAGCAGGATGTGGCTACACATCTACTTGATGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTGTTCCAAGATGGCTGCCTGCACTGGATGCATACAGATaGGCGGCTTTACAGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VAREKFSMLWLVPRWLPALDAYR*AALQVS Trigger: GGACACCTGTAAAGCCGCCAATCTGTATGCATCCAG...TGCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCTCCCTTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| CDS-3UTR CAA 90 bp | GGAGAAGTTTTCTATGCTGTGGCTTGTTCCAAGATGGCTGCCTGCAAATCAGCCCTGGCAGTGCGGATGTaGGCTCCTAATATTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: GEVFYAVACSKMAACKSALAVRM*APNIPA Trigger: GGCAGGAATATTAGGAGCCAACATCCGCACTGCCAG...GGCTGATTTGCAGGCAGCCATCTTGGAACAAGCCACAGCATAGAAAACTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| CDS-3UTR CAA 90 bp | ATGTCAGCTGAAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTAAGTATGAGAATGAGTaGGGCACTGGCATGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: MSAEGRRGGKGEVFYAVAKYENE*GTGMLC Trigger: GCACAGCATGCCAGTGCCCAACTCATTCTCATACTT...AGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| CDS-3UTR CAA 90 bp | CTGCAGTGCATGGACTGCCCAGATGTCGCTGATTGGGTTGCTACCCTGGTATGCTTTGAGACAGCCATCTaGGGAGTAAGTATGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: LQCMDCPDVADWVATLVCFETAI*GVSMRM Trigger: CATTCTCATACTTACTCCCAAGATGGCTGTCTCAAA...GCATACCAGGGTAGCAACCCAATCAGCGACATCTGGGCAGTCCATGCACTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027044.15 |
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| CDS-3UTR CAA 90 bp | AATCAGAGGTTTAAGAGGCACAGTTACTGGCTTCCCCTTCCCAATGGGGGCATTAAGTATGAGAATGAGTaGGGCACTGGCATGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: NQRFKRHSYWLPLPNGGIKYENE*GTGMLC Trigger: GCACAGCATGCCAGTGCCCAACTCATTCTCATACTT...AATGCCCCCATTGGGAAGGGGAAGCCAGTAACTGTGCCTCTTAAACCTCTGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027044.15 ENSMUST00000186467.2 |
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| CDS-3UTR CAA 90 bp | TGTCCATCAAGTAGATGTGTAGCCACATCCTGCTGGAGCCTCCTGCCCTGCACATCAAACGCTCCCTTTTaGGCAAATTCAATTGCATCC | + |
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Preference number: 5 (lower is better) Translates to: CPSSRCVATSCWSLLPCTSNAPF*ANSIAS Trigger: GGATGCAATTGAATTTGCCAAAAAGGGAGCGTTTGA...TGTGCAGGGCAGGAGGCTCCAGCAGGATGTGGCTACACATCTACTTGATGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| CDS-3UTR CAA 90 bp | ATGTCAGCTGAAGGCAGACGTGGTGGCAAGGGAGAAGTTTTCTATGCTGTGGCTTCACTAAACCTGAAATaGGGTAAGACATGCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: MSAEGRRGGKGEVFYAVASLNLK*GKTCHG Trigger: GCCATGGCATGTCTTACCCAATTTCAGGTTTAGTGA...AGCCACAGCATAGAAAACTTCTCCCTTGCCACCACGTCTGCCTTCAGCTGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| CDS-3UTR CAA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATCACAAGCCCAGCATCTaGGATCCTGGCAGTGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNHKPSI*DPGSAD Trigger: ATCCGCACTGCCAGGATCCAAGATGCTGGGCTTGTG...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| CDS-3UTR CAA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATCTGGCAGTGCGGATGTaGGCTCCTAATATTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNLAVRM*APNIPA Trigger: GGCAGGAATATTAGGAGCCAACATCCGCACTGCCAG...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| CDS TCA 90 bp | ATCCATGCCTACTTCCTTCGTAACCCCTGCTCCATATCTAATATTTaGGACAGCCATCTCAAAGGCGTAATCTGCTGTTTTTCCCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: IHAYFLRNPCSISNI*DSHLKGVICCFSRR Trigger: CCTTCGGGAAAAACAGCAGATTACGCCTTTGAGATGGCTGTCTCAAATATTAGATATGGAGCAGGGGTTACGAAGGAAGTAGGCATGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144177.8 ENSMUST00000190654.2 |
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| CDS-3UTR CAA 90 bp | TTCAAGCTAACGAGGGGTTGGTTAAATAAAGGTTCAGGTGACAGGAACAGAAATCTGGATGCATACAGATaGGCGGCTTTACAGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: FKLTRGWLNKGSGDRNRNLDAYR*AALQVS Trigger: GGACACCTGTAAAGCCGCCAATCTGTATGCATCCAG...ATTTCTGTTCCTGTCACCTGAACCTTTATTTAACCAACCCCTCGTTAGCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| CDS-3UTR CAA 90 bp | AAATTCAATTGCATCCATGAAGCTTCCATCTGTAGGTTCCACCCTTACATCATCAAGTATGAGAATGAGTaGGGCACTGGCATGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: KFNCIHEASICRFHPYIIKYENE*GTGMLC Trigger: GCACAGCATGCCAGTGCCCAACTCATTCTCATACTT...GATGATGTAAGGGTGGAACCTACAGATGGAAGCTTCATGGATGCAATTGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027044.15 ENSMUST00000130927.8 ENSMUST00000186467.2 |
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| CDS-3UTR CAA 90 bp | TGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATACTGAGTCCCAGGGTGGGTTaGATGGCTCGTGAAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: CLEIGIFMYLMGFGTGILSPRVG*MAREAM Trigger: CATTGCTTCACGAGCCATCAAACCCACCCTGGGACT...CAGTATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| CDS-3UTR CAA 90 bp | AACATAGGCATCAAACGCTCCCTTTTTGGCAAATTCAATTGCATCCATGAAGCTCCAGAAGAGCAGTTTTaGTGTCAACCACGTGACATC | + |
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Preference number: 5 (lower is better) Translates to: NIGIKRSLFGKFNCIHEAPEEQF*CQPRDI Trigger: GATGTCACGTGGTTGACACAAAAACTGCTCTTCTGG...AGCTTCATGGATGCAATTGAATTTGCCAAAAAGGGAGCGTTTGATGCCTATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130927.8 |
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| CDS-3UTR CAA 90 bp | AACATAGGCATCAAACGCTCCCTTTTTGGCAAATTCAATTGCATCCATGAAGCTATGGACCTCAGAGTCTaGGGAGTAAGTATGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: NIGIKRSLFGKFNCIHEAMDLRV*GVSMRM Trigger: CATTCTCATACTTACTCCCAAGACTCTGAGGTCCAT...AGCTTCATGGATGCAATTGAATTTGCCAAAAAGGGAGCGTTTGATGCCTATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130927.8 |
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| CDS-3UTR CAA 90 bp | AATTGGTTTGAGTTAGTCTGCCCTATGCAGATTGATCTGCCAGGCAATATAGTCTCAAACGCTCCCTTTTaGGCAAATTCAATTGCATCC | + |
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Preference number: 5 (lower is better) Translates to: NWFELVCPMQIDLPGNIVSNAPF*ANSIAS Trigger: GGATGCAATTGAATTTGCCAAAAAGGGAGCGTTTGA...GACTATATTGCCTGGCAGATCAATCTGCATAGGGCAGACTAACTCAAACCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190654.2 |
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| CDS-3UTR CAA 90 bp | TGTTTGGAGATAGGCATTTTTATGTATTTGATGGGGTTTGGTACAGGAATACTGTCACTAAACCTGAAATaGGGTAAGACATGCCATGGC | + |
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Preference number: 5 (lower is better) Translates to: CLEIGIFMYLMGFGTGILSLNLK*GKTCHG Trigger: GCCATGGCATGTCTTACCCAATTTCAGGTTTAGTGA...CAGTATTCCTGTACCAAACCCCATCAAATACATAAAAATGCCTATCTCCAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144177.8 |
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| CDS-3UTR CAA 90 bp | ATCTGTAGGTTCCACCCTTACATCATCATAAACCTGAAAACTGATGCCATTCTTATATTCTGTAGATCCTaGGGAGTAAGTATGAGAATG | + |
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Preference number: 5 (lower is better) Translates to: ICRFHPYIIINLKTDAILIFCRS*GVSMRM Trigger: CATTCTCATACTTACTCCCAAGGATCTACAGAATAT...AAGAATGGCATCAGTTTTCAGGTTTATGATGATGTAAGGGTGGAACCTACAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186467.2 |
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| CDS CAA 72 bp | AAGGTCCAGGGGCTTGGGAGTAAGTATGAGAATGAGTaGGGCACTGGCATGCTGTGCTTTGTAGGTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: KVQGLGSKYENE*GTGMLCFVGAS Trigger: TGAGGCACCTACAAAGCACAGCATGCCAGTGCCCAACTCATTCTCATACTTACTCCCAAGCCCCTGGACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144177.8 ENSMUST00000190654.2 |
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| CDS CAA 90 bp | TTTTTCCCGAAGGTCCAGGGGCTTGGGAGTAAGTATGAGAATGAGTaGGGCACTGGCATGCTGTGCTTTGTAGGTGCCTCAGCAAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: FFPKVQGLGSKYENE*GTGMLCFVGASASV Trigger: CACACTTGCTGAGGCACCTACAAAGCACAGCATGCCAGTGCCCAACTCATTCTCATACTTACTCCCAAGCCCCTGGACCTTCGGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144177.8 ENSMUST00000190654.2 |
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| CDS CAA 72 bp | GGACCTCAGAGTCTTGGGAGTAAGTATGAGAATGAGTaGGGCACTGGCATGCTGTGCTTTGTAGGTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: GPQSLGSKYENE*GTGMLCFVGAS Trigger: TGAGGCACCTACAAAGCACAGCATGCCAGTGCCCAACTCATTCTCATACTTACTCCCAAGACTCTGAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130927.8 |
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| CDS CAA 90 bp | GAACTTTATGGACCTCAGAGTCTTGGGAGTAAGTATGAGAATGAGTaGGGCACTGGCATGCTGTGCTTTGTAGGTGCCTCAGCAAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: ELYGPQSLGSKYENE*GTGMLCFVGASASV Trigger: CACACTTGCTGAGGCACCTACAAAGCACAGCATGCCAGTGCCCAACTCATTCTCATACTTACTCCCAAGACTCTGAGGTCCATAAAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130927.8 |
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| CDS TCA 72 bp | TACTTCCTTCGTAACCCCTGCTCCATATCTAATATTTaGGACAGCCATCTCAAAGGCGTAATCTGCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: YFLRNPCSISNI*DSHLKGVICCF Trigger: AAAACAGCAGATTACGCCTTTGAGATGGCTGTCTCAAATATTAGATATGGAGCAGGGGTTACGAAGGAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144177.8 ENSMUST00000190654.2 |
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