RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADH7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000055301

Ensembl transcript IDs: ENSMUST00000090171.7

Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTCTTTCCCCAGCTCTGCTTCTGTGTGCTTCTGAGACAGACTTGTaGTCTCAGAGAACACTGTCAGGAGCAAGGCTTCAGGTCACGGTA +
Preference number: 1 (lower is better)
Translates to: CLSPALLLCASETDL*SQRTLSGARLQVTV
Trigger: TACCGTGACCTGAAGCCTTGCTCCTGACAGTGTTCTCTGAGATCACAAGTCTGTCTCAGAAGCACACAGAAGCAGAGCTGGGGAAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR GCA 90 bp TGGTGCTGGGAACTTGGGTCCTCTGCAAAGGCTTGTTCTCTTAATTaGTCAGCCAATCTCTCCAGTGCCTTGCTGAGATATTTTTCCTCC +
Preference number: 1 (lower is better)
Translates to: WCWELGSSAKACSLN*SANLSSALLRYFSS
Trigger: GGAGGAAAAATATCTCAGCAAGGCACTGGAGAGATTGGCTGAGCAATTAAGAGAACAAGCCTTTGCAGAGGACCCAAGTTCCCAGCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR GCA 90 bp ATAGCTTCATGTAGGAGAATGAGCATAGATTCATATCTATCACCCTaGACAAAACGCAACACCAAATGGATCAAGAACACCAATGTGAGA +
Preference number: 1 (lower is better)
Translates to: IASCRRMSIDSYLSP*TKRNTKWIKNTNVR
Trigger: TCTCACATTGGTGTTCTTGATCCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGAATCTATGCTCATTCTCCTACATGAAGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR CCA 90 bp AGCATAGATTCATATCTATCACCCTGCACAAAACGCAACACCAAATaGATCAAGAACACCAATGTGAGACCAGATAACTTGAATATGATA +
Preference number: 1 (lower is better)
Translates to: SIDSYLSPCTKRNTK*IKNTNVRPDNLNMI
Trigger: TATCATATTCAAGTTATCTGGTCTCACATTGGTGTTCTTGATCCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGAATCTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR CCA 90 bp ATAAATACTAACTGGAGAAGAGAAAGTATCTTCAACCAACAGTACTaGTCAAAGTGGATAGCTTCATGTAGGAGAATGAGCATAGATTCA +
Preference number: 1 (lower is better)
Translates to: INTNWRRESIFNQQY*SKWIASCRRMSIDS
Trigger: TGAATCTATGCTCATTCTCCTACATGAAGCTATCCACTTTGACCAGTACTGTTGGTTGAAGATACTTTCTCTTCTCCAGTTAGTATTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR CAA 90 bp GGGGTTACAATCAGCTCTGAGCCACTCAGTGTTGGTGCTGGGAACTaGGGTCCTCTGCAAAGGCTTGTTCTCTTAATTGCTCAGCCAATC +
Preference number: 2 (lower is better)
Translates to: GVTISSEPLSVGAGN*GPLQRLVLLIAQPI
Trigger: GATTGGCTGAGCAATTAAGAGAACAAGCCTTTGCAGAGGACCCAAGTTCCCAGCACCAACACTGAGTGGCTCAGAGCTGATTGTAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR-3UTR CCA 90 bp ACGCTTATGTACCATGAAAAAGACCACCATCTGAGCAAAAAGGCAGGCTGCATGTTGGTGCTGGGAACTTaGGTCCTCTGCAAAGGCTTG +
Preference number: 2 (lower is better)
Translates to: TLMYHEKDHHLSKKAGCMLVLGT*VLCKGL
Trigger: CAAGCCTTTGCAGAGGACCCAAGTTCCCAGCACCAA...CATGCAGCCTGCCTTTTTGCTCAGATGGTGGTCTTTTTCATGGTACATAAGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR-3UTR CCA 90 bp ACGCTTATGTACCATGAAAAAGACCACCATCTGAGCAAAAAGGCAGGCTGCATGTTCTATGTCCTTTTATaGGAATCCCAAATGCCCCCT +
Preference number: 2 (lower is better)
Translates to: TLMYHEKDHHLSKKAGCMFYVLL*ESQMPP
Trigger: AGGGGGCATTTGGGATTCCCATAAAAGGACATAGAA...CATGCAGCCTGCCTTTTTGCTCAGATGGTGGTCTTTTTCATGGTACATAAGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR-3UTR TCA 90 bp ACGCTTATGTACCATGAAAAAGACCACCATCTGAGCAAAAAGGCAGGCTGCATGGAGCTCTGGTGGTTTTaGTGGTCATTTCTTGAAAAA +
Preference number: 2 (lower is better)
Translates to: TLMYHEKDHHLSKKAGCMELWWF*WSFLEK
Trigger: TTTTTCAAGAAATGACCATCAAAACCACCAGAGCTC...CATGCAGCCTGCCTTTTTGCTCAGATGGTGGTCTTTTTCATGGTACATAAGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR-3UTR GCA 90 bp TTTGCTATCAGAGAAACACAGGTTTCCCAAAATGAGTTCAGGAAAATTCCCATCCTCCAGACATGGCTGTaGTTTTCCCATGTCACAAAG +
Preference number: 2 (lower is better)
Translates to: FAIRETQVSQNEFRKIPILQTWL*FSHVTK
Trigger: CTTTGTGACATGGGAAAAGCACAGCCATGTCTGGAG...GATGGGAATTTTCCTGAACTCATTTTGGGAAACCTGTGTTTCTCTGATAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR-3UTR GCA 90 bp AGAATGAGCATAGATTCATATCTATCACCCTGCACAAAACGCAACACCAAATGGGCTTGTTCTCTTAATTaGTCAGCCAATCTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: RMSIDSYLSPCTKRNTKWACSLN*SANLSS
Trigger: ACTGGAGAGATTGGCTGAGCAATTAAGAGAACAAGC...CCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGAATCTATGCTCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR-3UTR CCA 90 bp AGAATGAGCATAGATTCATATCTATCACCCTGCACAAAACGCAACACCAAATGGAGTGTGTATGTGCCCTaGTCTGATTTTGCTATCAGA +
Preference number: 2 (lower is better)
Translates to: RMSIDSYLSPCTKRNTKWSVYVP*SDFAIR
Trigger: TCTGATAGCAAAATCAGACCAGGGCACATACACACT...CCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGAATCTATGCTCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR-3UTR TCA 90 bp TTGGCTTGTAGTTGCCTAGACTTTTCAACCTATTCTATGTCCTTTTATGGGAATTCTGAGACAGACTTGTaGTCTCAGAGAACACTGTCA +
Preference number: 2 (lower is better)
Translates to: LACSCLDFSTYSMSFYGNSETDL*SQRTLS
Trigger: TGACAGTGTTCTCTGAGATCACAAGTCTGTCTCAGA...ATTCCCATAAAAGGACATAGAATAGGTTGAAAAGTCTAGGCAACTACAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR-3UTR GCA 90 bp TTGGCTTGTAGTTGCCTAGACTTTTCAACCTATTCTATGTCCTTTTATGGGAATATCTCCACTGACAGATaGTGGTGCAATTACAGCAAA +
Preference number: 2 (lower is better)
Translates to: LACSCLDFSTYSMSFYGNISTDR*WCNYSK
Trigger: TTTGCTGTAATTGCACCAGCATCTGTCAGTGGAGAT...ATTCCCATAAAAGGACATAGAATAGGTTGAAAAGTCTAGGCAACTACAAGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR CAA 90 bp GCAAAGGCTTGTTCTCTTAATTGCTCAGCCAATCTCTCCAGTGCCTaGCTGAGATATTTTTCCTCCTATGTTATTAAGTATTTTAGTTTG +
Preference number: 2 (lower is better)
Translates to: AKACSLNCSANLSSA*LRYFSSYVIKYFSL
Trigger: CAAACTAAAATACTTAATAACATAGGAGGAAAAATATCTCAGCAAGGCACTGGAGAGATTGGCTGAGCAATTAAGAGAACAAGCCTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR-3UTR TCA 90 bp TTGGCTTGTAGTTGCCTAGACTTTTCAACCTATTCTATGTCCTTTTATGGGAATCTCCAAGTTAATCATTaGAAAATGTGCCCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: LACSCLDFSTYSMSFYGNLQVNH*KMCPSL
Trigger: AAGGGAAGGGCACATTTTTCAATGATTAACTTGGAG...ATTCCCATAAAAGGACATAGAATAGGTTGAAAAGTCTAGGCAACTACAAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR TCA 72 bp TGCTGGATCCCCTGGAGCTGGGGTTACAATCAGCTCTaGGCCACTCAGTGTTGGTGCTGGGAACTTGGGTCC +
Preference number: 3 (lower is better)
Translates to: CWIPWSWGYNQL*ATQCWCWELGS
Trigger: GGACCCAAGTTCCCAGCACCAACACTGAGTGGCTCAGAGCTGATTGTAACCCCAGCTCCAGGGGATCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR-3UTR CAA 90 bp ACGCTTATGTACCATGAAAAAGACCACCATCTGAGCAAAAAGGCAGGCTGCATGAATCTCTCCAGTGCCTaGCTGAGATATTTTTCCTCC +
Preference number: 3 (lower is better)
Translates to: TLMYHEKDHHLSKKAGCMNLSSA*LRYFSS
Trigger: GGAGGAAAAATATCTCAGCAAGGCACTGGAGAGATT...CATGCAGCCTGCCTTTTTGCTCAGATGGTGGTCTTTTTCATGGTACATAAGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR GCA 72 bp TGTAGGAGAATGAGCATAGATTCATATCTATCACCCTaGACAAAACGCAACACCAAATGGATCAAGAACACC +
Preference number: 3 (lower is better)
Translates to: CRRMSIDSYLSP*TKRNTKWIKNT
Trigger: GGTGTTCTTGATCCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGAATCTATGCTCATTCTCCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR CCA 72 bp TCATATCTATCACCCTGCACAAAACGCAACACCAAATaGATCAAGAACACCAATGTGAGACCAGATAACTTG +
Preference number: 3 (lower is better)
Translates to: SYLSPCTKRNTK*IKNTNVRPDNL
Trigger: CAAGTTATCTGGTCTCACATTGGTGTTCTTGATCCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR TCA 72 bp TATTCTAAAAATGTCTTGTCTTATATTGATAAACACTaGCTAACATCTCCAGACATGGCTGTGCTTTTCCCA +
Preference number: 3 (lower is better)
Translates to: YSKNVLSYIDKH*LTSPDMAVLFP
Trigger: TGGGAAAAGCACAGCCATGTCTGGAGATGTTAGTCAGTGTTTATCAATATAAGACAAGACATTTTTAGAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR CAA 72 bp ATCAGCTCTGAGCCACTCAGTGTTGGTGCTGGGAACTaGGGTCCTCTGCAAAGGCTTGTTCTCTTAATTGCT +
Preference number: 4 (lower is better)
Translates to: ISSEPLSVGAGN*GPLQRLVLLIA
Trigger: AGCAATTAAGAGAACAAGCCTTTGCAGAGGACCCAAGTTCCCAGCACCAACACTGAGTGGCTCAGAGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR TCA 90 bp TTGCTCAGCCAATCTCTCCAGTGCCTTGCTGAGATATTTTTCCTCCTATGTTATAGGTGCTGGTGTTCATaGAGTGCTGGACCGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LLSQSLQCLAEIFFLLCYRCWCS*SAGPVC
Trigger: GCAAACCGGTCCAGCACTTCATGAACACCAGCACCT...ATAACATAGGAGGAAAAATATCTCAGCAAGGCACTGGAGAGATTGGCTGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR TCA 90 bp TTGCTCAGCCAATCTCTCCAGTGCCTTGCTGAGATATTTTTCCTCCTATGTTATGCATTGGGTCATAGGTaGGCATCTTGGCTGACGGAG +
Preference number: 4 (lower is better)
Translates to: LLSQSLQCLAEIFFLLCYALGHR*ASWLTE
Trigger: CTCCGTCAGCCAAGATGCTCACCTATGACCCAATGC...ATAACATAGGAGGAAAAATATCTCAGCAAGGCACTGGAGAGATTGGCTGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp TATGTGCCCTGGTCTGATTTTGCTATCAGAGAAACACAGGTTTCCCAAAATGAGGACTTCCTTAGCCTTTaGTGGGGCCACCTCGATTTC +
Preference number: 4 (lower is better)
Translates to: YVPWSDFAIRETQVSQNEDFLSL*WGHLDF
Trigger: GAAATCGAGGTGGCCCCACCAAAGGCTAAGGAAGTC...CTCATTTTGGGAAACCTGTGTTTCTCTGATAGCAAAATCAGACCAGGGCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR TCA 90 bp TTGCTCAGCCAATCTCTCCAGTGCCTTGCTGAGATATTTTTCCTCCTATGTTATGTAGAAAGAGGGGGATaGCTTTGTCACCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LLSQSLQCLAEIFFLLCYVERGG*LCHLVS
Trigger: TGAGACCAGGTGACAAAGTCATCCCCCTCTTTCTAC...ATAACATAGGAGGAAAAATATCTCAGCAAGGCACTGGAGAGATTGGCTGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR GCA 90 bp AGAATGAGCATAGATTCATATCTATCACCCTGCACAAAACGCAACACCAAATGGCTGGTGTTCATGAAGTaGTGGACCGGTTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RMSIDSYLSPCTKRNTKWLVFMK*WTGLPL
Trigger: CAAGGGCAAACCGGTCCAGCACTTCATGAACACCAG...CCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGAATCTATGCTCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp TTGCTCAGCCAATCTCTCCAGTGCCTTGCTGAGATATTTTTCCTCCTATGTTATTCAATGGAGAAAGGCTaGTTCACTCCCCATAGGACA +
Preference number: 4 (lower is better)
Translates to: LLSQSLQCLAEIFFLLCYSMEKG*FTPHRT
Trigger: TGTCCTATGGGGAGTGAACCAGCCTTTCTCCATTGA...ATAACATAGGAGGAAAAATATCTCAGCAAGGCACTGGAGAGATTGGCTGAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp ACGCTTATGTACCATGAAAAAGACCACCATCTGAGCAAAAAGGCAGGCTGCATGATGTCCCACAATCACTaGAAACTTAGACACCATCGA +
Preference number: 4 (lower is better)
Translates to: TLMYHEKDHHLSKKAGCMMSHNH*KLRHHR
Trigger: TCGATGGTGTCTAAGTTTCCAGTGATTGTGGGACAT...CATGCAGCCTGCCTTTTTGCTCAGATGGTGGTCTTTTTCATGGTACATAAGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp TTTGCTATCAGAGAAACACAGGTTTCCCAAAATGAGTTCAGGAAAATTCCCATCGTGTTCATGAAGTGCTaGACCGGTTTGCCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FAIRETQVSQNEFRKIPIVFMKC*TGLPLQ
Trigger: CTGCAAGGGCAAACCGGTCCAGCACTTCATGAACAC...GATGGGAATTTTCCTGAACTCATTTTGGGAAACCTGTGTTTCTCTGATAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR TCA 90 bp AGAATGAGCATAGATTCATATCTATCACCCTGCACAAAACGCAACACCAAATGGGTTCATATGGCAAGATaGGAGGGCATCAACCATGGT +
Preference number: 4 (lower is better)
Translates to: RMSIDSYLSPCTKRNTKWVHMAR*EGINHG
Trigger: ACCATGGTTGATGCCCTCTCATCTTGCCATATGAAC...CCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGAATCTATGCTCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp TTGGCTTGTAGTTGCCTAGACTTTTCAACCTATTCTATGTCCTTTTATGGGAATTTCCTTAGCCTTTGGTaGGGCCACCTCGATTTCCTC +
Preference number: 4 (lower is better)
Translates to: LACSCLDFSTYSMSFYGNFLSLW*GHLDFL
Trigger: GAGGAAATCGAGGTGGCCCCACCAAAGGCTAAGGAA...ATTCCCATAAAAGGACATAGAATAGGTTGAAAAGTCTAGGCAACTACAAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp TTTGCTATCAGAGAAACACAGGTTTCCCAAAATGAGTTCAGGAAAATTCCCATCCCTCGATTTCCTCAATaGAGAAAGGCTGGTTCACTC +
Preference number: 4 (lower is better)
Translates to: FAIRETQVSQNEFRKIPIPRFPQ*RKAGSL
Trigger: GAGTGAACCAGCCTTTCTCCATTGAGGAAATCGAGG...GATGGGAATTTTCCTGAACTCATTTTGGGAAACCTGTGTTTCTCTGATAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp TATGTGCCCTGGTCTGATTTTGCTATCAGAGAAACACAGGTTTCCCAAAATGAGGTGTGGGTTATCAACTaGTCCAGGTCAAACTTCTTT +
Preference number: 4 (lower is better)
Translates to: YVPWSDFAIRETQVSQNEVWVIN*SRSNFF
Trigger: AAAGAAGTTTGACCTGGACCAGTTGATAACCCACAC...CTCATTTTGGGAAACCTGTGTTTCTCTGATAGCAAAATCAGACCAGGGCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp ACGCTTATGTACCATGAAAAAGACCACCATCTGAGCAAAAAGGCAGGCTGCATGGATCCTTTTATTATATaGTCATCTGTGCGACAGATT +
Preference number: 4 (lower is better)
Translates to: TLMYHEKDHHLSKKAGCMDPFII*SSVRQI
Trigger: AATCTGTCGCACAGATGACCATATAATAAAAGGATC...CATGCAGCCTGCCTTTTTGCTCAGATGGTGGTCTTTTTCATGGTACATAAGCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp AGAATGAGCATAGATTCATATCTATCACCCTGCACAAAACGCAACACCAAATGGACGGCCAGAGCTTTCTaGAATTTGTCTTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: RMSIDSYLSPCTKRNTKWTARAF*NLSLLM
Trigger: CATCAACAAAGACAAATTCCAGAAAGCTCTGGCCGT...CCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGAATCTATGCTCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp TTCTTTCTCTTAAATCACTTTGTTTCCAGATACTTCAACACTCTACCACCACTACACCAACCACCACACTaGTCCCATAGTTCATATGGC +
Preference number: 4 (lower is better)
Translates to: FFLLNHFVSRYFNTLPPLHQPPH*SHSSYG
Trigger: GCCATATGAACTATGGGACCAGTGTGGTGGTTGGTG...TAGTGGTGGTAGAGTGTTGAAGTATCTGGAAACAAAGTGATTTAAGAGAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CCA 90 bp TTGGCTTGTAGTTGCCTAGACTTTTCAACCTATTCTATGTCCTTTTATGGGAATAGTGAAGAGCAGCATTaGGTCATAGGTGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: LACSCLDFSTYSMSFYGNSEEQH*VIGEHL
Trigger: AAGATGCTCACCTATGACCCAATGCTGCTCTTCACT...ATTCCCATAAAAGGACATAGAATAGGTTGAAAAGTCTAGGCAACTACAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
3UTR CAA 72 bp TGTTCTCTTAATTGCTCAGCCAATCTCTCCAGTGCCTaGCTGAGATATTTTTCCTCCTATGTTATTAAGTAT +
Preference number: 4 (lower is better)
Translates to: CSLNCSANLSSA*LRYFSSYVIKY
Trigger: ATACTTAATAACATAGGAGGAAAAATATCTCAGCAAGGCACTGGAGAGATTGGCTGAGCAATTAAGAGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS TCA 90 bp ACGCCCAGTGAAGAGCAGCATTGGGTCATAGGTGAGCATCTTGGCTaGCGGAGGAGCACCAACCACCACACTGGTCCCATAGTTCATATG +
Preference number: 5 (lower is better)
Translates to: TPSEEQHWVIGEHLG*RRSTNHHTGPIVHM
Trigger: CATATGAACTATGGGACCAGTGTGGTGGTTGGTGCTCCTCCGTCAGCCAAGATGCTCACCTATGACCCAATGCTGCTCTTCACTGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CAA 90 bp TATGTGCCCTGGTCTGATTTTGCTATCAGAGAAACACAGGTTTCCCAAAATGAGCTCCTAATGCAGAGATaGCCCTCTGGGTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: YVPWSDFAIRETQVSQNELLMQR*PSGFRQ
Trigger: CTGCCTGAACCCAGAGGGCAATCTCTGCATTAGGAG...CTCATTTTGGGAAACCTGTGTTTCTCTGATAGCAAAATCAGACCAGGGCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CAA 90 bp TTGCTCAGCCAATCTCTCCAGTGCCTTGCTGAGATATTTTTCCTCCTATGTTATACCTCACTGATGGGCTaGGTAGAGTCCTTGGGACTG +
Preference number: 5 (lower is better)
Translates to: LLSQSLQCLAEIFFLLCYTSLMG*VESLGL
Trigger: CAGTCCCAAGGACTCTACCAAGCCCATCAGTGAGGT...ATAACATAGGAGGAAAAATATCTCAGCAAGGCACTGGAGAGATTGGCTGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CAA 90 bp AGAATGAGCATAGATTCATATCTATCACCCTGCACAAAACGCAACACCAAATGGGAGCCAGGGGTGACCTaGGCAGTTTTAACAGCAGCT +
Preference number: 5 (lower is better)
Translates to: RMSIDSYLSPCTKRNTKWEPGVT*AVLTAA
Trigger: AGCTGCTGTTAAAACTGCCAAGGTCACCCCTGGCTC...CCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGAATCTATGCTCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CAA 90 bp AGAATGAGCATAGATTCATATCTATCACCCTGCACAAAACGCAACACCAAATGGGGCTTGGTAGAGTCCTaGGGACTGATACACTCTGTG +
Preference number: 5 (lower is better)
Translates to: RMSIDSYLSPCTKRNTKWGLVES*GLIHSV
Trigger: CACAGAGTGTATCAGTCCCAAGGACTCTACCAAGCC...CCATTTGGTGTTGCGTTTTGTGCAGGGTGATAGATATGAATCTATGCTCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CCA 90 bp CCCACAATCACTGGAAACTTAGACACCATCGATCCTTTTATTATATaGTCATCTGTGCGACAGATTCCTGTGGCCAAAATCTTAACACGG +
Preference number: 5 (lower is better)
Translates to: PTITGNLDTIDPFII*SSVRQIPVAKILTR
Trigger: CCGTGTTAAGATTTTGGCCACAGGAATCTGTCGCACAGATGACCATATAATAAAAGGATCGATGGTGTCTAAGTTTCCAGTGATTGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS-3UTR CAA 90 bp TATGTGCCCTGGTCTGATTTTGCTATCAGAGAAACACAGGTTTCCCAAAATGAGTGGAATTTGTCTTTGTaGATGTCGATTCCAATGATC +
Preference number: 5 (lower is better)
Translates to: YVPWSDFAIRETQVSQNEWNLSL*MSIPMI
Trigger: GATCATTGGAATCGACATCAACAAAGACAAATTCCA...CTCATTTTGGGAAACCTGTGTTTCTCTGATAGCAAAATCAGACCAGGGCACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CAA 90 bp CCTGTCATGTCGGATAGCACCTCACTGATGGGCTTGGTAGAGTCCTaGGGACTGATACACTCTGTGGCACCTACGGCCAGAGCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: PVMSDSTSLMGLVES*GLIHSVAPTARAFW
Trigger: CCAGAAAGCTCTGGCCGTAGGTGCCACAGAGTGTATCAGTCCCAAGGACTCTACCAAGCCCATCAGTGAGGTGCTATCCGACATGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS TCA 72 bp GAAGAGCAGCATTGGGTCATAGGTGAGCATCTTGGCTaGCGGAGGAGCACCAACCACCACACTGGTCCCATA +
Preference number: 6 (lower is better)
Translates to: EEQHWVIGEHLG*RRSTNHHTGPI
Trigger: TATGGGACCAGTGTGGTGGTTGGTGCTCCTCCGTCAGCCAAGATGCTCACCTATGACCCAATGCTGCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CCA 72 bp GCCTGTCAGATCGCTCCTAATGCAGAGATTGCCCTCTaGGTTCAGGCAGGCGTTGCATTCTCTACACTGTGG +
Preference number: 6 (lower is better)
Translates to: ACQIAPNAEIAL*VQAGVAFSTLW
Trigger: CCACAGTGTAGAGAATGCAACGCCTGCCTGAACCCAGAGGGCAATCTCTGCATTAGGAGCGATCTGACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CAA 72 bp ACTCCACGGCCTGTCAGATCGCTCCTAATGCAGAGATaGCCCTCTGGGTTCAGGCAGGCGTTGCATTCTCTA +
Preference number: 6 (lower is better)
Translates to: TPRPVRSLLMQR*PSGFRQALHSL
Trigger: TAGAGAATGCAACGCCTGCCTGAACCCAGAGGGCAATCTCTGCATTAGGAGCGATCTGACAGGCCGTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CAA 72 bp TCGGATAGCACCTCACTGATGGGCTTGGTAGAGTCCTaGGGACTGATACACTCTGTGGCACCTACGGCCAGA +
Preference number: 6 (lower is better)
Translates to: SDSTSLMGLVES*GLIHSVAPTAR
Trigger: TCTGGCCGTAGGTGCCACAGAGTGTATCAGTCCCAAGGACTCTACCAAGCCCATCAGTGAGGTGCTATCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CAA 90 bp TCAGCCAATACTCCACGGCCTGTCAGATCGCTCCTAATGCAGAGATaGCCCTCTGGGTTCAGGCAGGCGTTGCATTCTCTACACTGTGGT +
Preference number: 6 (lower is better)
Translates to: SANTPRPVRSLLMQR*PSGFRQALHSLHCG
Trigger: ACCACAGTGTAGAGAATGCAACGCCTGCCTGAACCCAGAGGGCAATCTCTGCATTAGGAGCGATCTGACAGGCCGTGGAGTATTGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CAA 90 bp TGTATGGTGTTGCCTGTCATGTCGGATAGCACCTCACTGATGGGCTaGGTAGAGTCCTTGGGACTGATACACTCTGTGGCACCTACGGCC +
Preference number: 6 (lower is better)
Translates to: CMVLPVMSDSTSLMG*VESLGLIHSVAPTA
Trigger: GGCCGTAGGTGCCACAGAGTGTATCAGTCCCAAGGACTCTACCAAGCCCATCAGTGAGGTGCTATCCGACATGACAGGCAACACCATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CCA 72 bp GCATCTTGGCTGACGGAGGAGCACCAACCACCACACTaGTCCCATAGTTCATATGGCAAGATGAGAGGGCAT +
Preference number: 6 (lower is better)
Translates to: ASWLTEEHQPPH*SHSSYGKMRGH
Trigger: ATGCCCTCTCATCTTGCCATATGAACTATGGGACCAGTGTGGTGGTTGGTGCTCCTCCGTCAGCCAAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CAA 72 bp CTAATGCAGAGATTGCCCTCTGGGTTCAGGCAGGCGTaGCATTCTCTACACTGTGGTAGAAAGAGGGGGATG +
Preference number: 6 (lower is better)
Translates to: LMQRLPSGFRQA*HSLHCGRKRGM
Trigger: CATCCCCCTCTTTCTACCACAGTGTAGAGAATGCAACGCCTGCCTGAACCCAGAGGGCAATCTCTGCATTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CAA 72 bp GTGCTGGTGTTCATGAAGTGCTGGACCGGTTTGCCCTaGCAGGTGAATCTGGTAGTGCCATCAGCCAATACT +
Preference number: 6 (lower is better)
Translates to: VLVFMKCWTGLP*QVNLVVPSANT
Trigger: AGTATTGGCTGATGGCACTACCAGATTCACCTGCAAGGGCAAACCGGTCCAGCACTTCATGAACACCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CAA 72 bp TTGCCTGTCATGTCGGATAGCACCTCACTGATGGGCTaGGTAGAGTCCTTGGGACTGATACACTCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: LPVMSDSTSLMG*VESLGLIHSVA
Trigger: TGCCACAGAGTGTATCAGTCCCAAGGACTCTACCAAGCCCATCAGTGAGGTGCTATCCGACATGACAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS TCA 72 bp AACCACCACACTGGTCCCATAGTTCATATGGCAAGATaGGAGGGCATCAACCATGGTCTCAAGACGCCCAAT +
Preference number: 6 (lower is better)
Translates to: NHHTGPIVHMAR*EGINHGLKTPN
Trigger: ATTGGGCGTCTTGAGACCATGGTTGATGCCCTCTCATCTTGCCATATGAACTATGGGACCAGTGTGGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CAA 90 bp ATGGTCTCAAGACGCCCAATAACTTCAAAAGTATACTGTATGGTGTaGCCTGTCATGTCGGATAGCACCTCACTGATGGGCTTGGTAGAG +
Preference number: 6 (lower is better)
Translates to: MVSRRPITSKVYCMV*PVMSDSTSLMGLVE
Trigger: CTCTACCAAGCCCATCAGTGAGGTGCTATCCGACATGACAGGCAACACCATACAGTATACTTTTGAAGTTATTGGGCGTCTTGAGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CAA 72 bp AGACGCCCAATAACTTCAAAAGTATACTGTATGGTGTaGCCTGTCATGTCGGATAGCACCTCACTGATGGGC +
Preference number: 6 (lower is better)
Translates to: RRPITSKVYCMV*PVMSDSTSLMG
Trigger: GCCCATCAGTGAGGTGCTATCCGACATGACAGGCAACACCATACAGTATACTTTTGAAGTTATTGGGCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CCA 72 bp ACTGGAAACTTAGACACCATCGATCCTTTTATTATATaGTCATCTGTGCGACAGATTCCTGTGGCCAAAATC +
Preference number: 6 (lower is better)
Translates to: TGNLDTIDPFII*SSVRQIPVAKI
Trigger: GATTTTGGCCACAGGAATCTGTCGCACAGATGACCATATAATAAAAGGATCGATGGTGTCTAAGTTTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7
CDS CCA 72 bp TTGATGTTATTAAAAGGCAAGGTGTGGGTTATCAACTaGTCCAGGTCAAACTTCTTTTCCAGGAACTCAGTC +
Preference number: 6 (lower is better)
Translates to: LMLLKGKVWVIN*SRSNFFSRNSV
Trigger: GACTGAGTTCCTGGAAAAGAAGTTTGACCTGGACCAGTTGATAACCCACACCTTGCCTTTTAATAACATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090171.7