Pregenerated sensors for ADH6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074206Ensembl transcript IDs: ENSMUST00000090166.5, ENSMUST00000199673.6
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCATTCTGAACCCACCATTTGGAAGCACTCATGGGTGGAAAGTTTaGTTTTATCCGTTTACCTTCCTACTTATTTGTTCTTTTAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: SILNPPFGSTHGWKV*FYPFTFLLICSFKP Trigger: TGGCTTAAAAGAACAAATAAGTAGGAAGGTAAACGGATAAAAGCAAACTTTCCACCCATGAGTGCTTCCAAATGGTGGGTTCAGAATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR-3UTR TCA 90 bp | CACTCCTTCATTGCCCCTCTATGGACACTGAAAATATTTGTAATCAGAGCCAGCGTACAGTTTACTCCATaGGCCCTTGCCACTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: HSFIAPLWTLKIFVIRASVQFTP*ALATPQ Trigger: CTGAGGAGTGGCAAGGGCTCATGGAGTAAACTGTAC...GCTGGCTCTGATTACAAATATTTTCAGTGTCCATAGAGGGGCAATGAAGGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGAACATGGGTGGAAAGTTTaGTTTTATCCGTTTACCTTC | + |
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Preference number: 2 (lower is better) Translates to: VSCSDLHSLQFNLQGGKEHGWKV*FYPFTF Trigger: GAAGGTAAACGGATAAAAGCAAACTTTCCACCCATG...TTCTTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR TCA 72 bp | TACAGTTTACTCCATGAGCCCTTGCCACTCCTCAGGTaGCTCCTCCCTAGTCTGGTGGGAGCTAGAGTAGTA | + |
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Preference number: 3 (lower is better) Translates to: YSLLHEPLPLLR*LLPSLVGARVV Trigger: TACTACTCTAGCTCCCACCAGACTAGGGAGGAGTCACCTGAGGAGTGGCAAGGGCTCATGGAGTAAACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR CCA 72 bp | AGCATTCTGAACCCACCATTTGGAAGCACTCATGGGTaGAAAGTTTGCTTTTATCCGTTTACCTTCCTACTT | + |
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Preference number: 3 (lower is better) Translates to: SILNPPFGSTHG*KVCFYPFTFLL Trigger: AAGTAGGAAGGTAAACGGATAAAAGCAAACTTTCCACCCATGAGTGCTTCCAAATGGTGGGTTCAGAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR-3UTR CAA 90 bp | CACTCCTTCATTGCCCCTCTATGGACACTGAAAATATTTGTAATCAGAGCCAGCAAGACAATCACTGAGTaGCAGTTTGAATGGAAATGC | + |
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Preference number: 3 (lower is better) Translates to: HSFIAPLWTLKIFVIRASKTITE*QFEWKC Trigger: GCATTTCCATTCAAACTGCAACTCAGTGATTGTCTT...GCTGGCTCTGATTACAAATATTTTCAGTGTCCATAGAGGGGCAATGAAGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR CCA 72 bp | ATAAAGCATTCTGAACCCACCATTTGGAAGCACTCATaGGTGGAAAGTTTGCTTTTATCCGTTTACCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: IKHSEPTIWKHS*VESLLLSVYLP Trigger: AGGAAGGTAAACGGATAAAAGCAAACTTTCCACCCATGAGTGCTTCCAAATGGTGGGTTCAGAATGCTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGAACTTGACATATTGCAGTaGAGGCTGGTGTTAGAGATC | + |
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Preference number: 3 (lower is better) Translates to: VSCSDLHSLQFNLQGGKELDILQ*RLVLEI Trigger: GATCTCTAACACCAGCCTCAACTGCAATATGTCAAG...TTCTTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR GCA 72 bp | AACCCACCATTTGGAAGCACTCATGGGTGGAAAGTTTaGTTTTATCCGTTTACCTTCCTACTTATTTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: NPPFGSTHGWKV*FYPFTFLLICS Trigger: AGAACAAATAAGTAGGAAGGTAAACGGATAAAAGCAAACTTTCCACCCATGAGTGCTTCCAAATGGTGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR GCA 72 bp | AAATGTGATATTCAAAAACTCATCAGGCAGGTTAATTaGCATTTACTGTCACAAGTCATCATGAGGGTAATG | + |
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Preference number: 3 (lower is better) Translates to: KCDIQKLIRQVN*HLLSQVIMRVM Trigger: CATTACCCTCATGATGACTTGTGACAGTAAATGGCAATTAACCTGCCTGATGAGTTTTTGAATATCACATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| CDS-3UTR TCA 90 bp | TGGAAGTCACATGTATGTCACCACACCCAGGAATGTCTTGTACACACACACACAAGGCTTTGCAGGCCATaGCGATGGCAGAGCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: WKSHVCHHTQECLVHTHTRLCRP*RWQSQF Trigger: GAATTGGCTCTGCCATCGTCATGGCCTGCAAAGCCT...TGTGTGTGTGTGTACAAGACATTCCTGGGTGTGGTGACATACATGTGACTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR CAA 72 bp | GGAAGTCACATGTATGTCACCACACCCAGGAATGTCTaGTACACACACACACACACACACACACACACACAC | + |
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Preference number: 4 (lower is better) Translates to: GSHMYVTTPRNV*YTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAAGACATTCCTGGGTGTGGTGACATACATGTGACTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| CDS-3UTR TCA 90 bp | TGTGTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTACCTCGTGGCCCAGGATaGCAGGAAATGGCGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: CVFPVLISIVCSLISKEVPRGPG*QEMAFS Trigger: TGAAAACGCCATTTCCTGTCATCCTGGGCCACGAGG...TACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTTCCTTCACCACCTCCTaGACAGGCTTCTTCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VCVSCSDLHSLQFNLQGGSFTTS*TGFFSL Trigger: CAAGCTGAAGAAGCCTGTGCAGGAGGTGGTGAAGGA...ACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR TCA 90 bp | TGTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGAGCCAGGGGTGACCTaGGCTGTGTTAAACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: CVSCSDLHSLQFNLQGGKEPGVT*AVLNTA Trigger: AGCTGTGTTTAACACAGCTCAGGTCACCCCTGGCTC...TTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR GCA 90 bp | TGTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGGTCCAGGCAACAGCTaGCCGGCATCTGATGACATT | + |
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Preference number: 4 (lower is better) Translates to: CVSCSDLHSLQFNLQGGKGPGNS*PASDDI Trigger: AATGTCATCAGATGCCGGGCAGCTGTTGCCTGGACC...TTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGCTCACCAGCCTTTGGTaGATCAACTTCAACCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VCVFPVLISIVCSLISKELTSLW*INFNLL Trigger: GAGGAGGTTGAAGTTGATCCACCAAAGGCTGGTGAG...CTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS-3UTR TCA 90 bp | AAATTGTGTGTGTGTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCAGGCTTTGCAGGCCATaGCGATGGCAGAGCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: KLCVCVSCSDLHSLQFNLRLCRP*RWQSQF Trigger: GAATTGGCTCTGCCATCGTCATGGCCTGCAAAGCCT...GAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACACACACACACAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR GCA 90 bp | CTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGAAGCATAGAAGATCCTTCACCACCTCCTaGACAGGCTTCTTCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LISIVCSLISKEVKKHRRSFTTS*TGFFSL Trigger: CAAGCTGAAGAAGCCTGTGCAGGAGGTGGTGAAGGA...TCTTCTATGCTTCTTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR CCA 90 bp | TTAATCTCCAAGGAGGTAAAGAAGCATAGAAGAGCACTGCTGAGATGCCCGTGTCAGGATGACAGGAAATaGCGTTTTCATTTTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LISKEVKKHRRALLRCPCQDDRK*RFHFPF Trigger: GAAGGGAAAATGAAAACGCCATTTCCTGTCATCCTG...ACACGGGCATCTCAGCAGTGCTCTTCTATGCTTCTTTACCTCCTTGGAGATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS-3UTR TCA 90 bp | TTTACCTTCCTACTTATTTGTTCTTTTAAGCCAAAGCTTATTCCTGACCAATGCGAGCCAGGGGTGACCTaGGCTGTGTTAAACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: FTFLLICSFKPKLIPDQCEPGVT*AVLNTA Trigger: AGCTGTGTTTAACACAGCTCAGGTCACCCCTGGCTC...GCATTGGTCAGGAATAAGCTTTGGCTTAAAAGAACAAATAAGTAGGAAGGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| CDS-3UTR TCA 90 bp | GTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGAACAACCATGGTTTCAATaGGTCCGATGGCCTCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VSCSDLHSLQFNLQGGKEQPWFQ*VRWPQR Trigger: CCTTTGAGGCCATCGGACTCATTGAAACCATGGTTG...TTCTTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR GCA 90 bp | GTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGGCCACTGCAATCTCATaGACCACAGTATATTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: VFPVLISIVCSLISKEVKATAIS*TTVYSV Trigger: CACGGAATATACTGTGGTGCATGAGATTGCAGTGGC...CTTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAGGTATGATTATCAGTaGCACAGATCCCAGAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: VCVSCSDLHSLQFNLQGGRYDYQ*HRSQRL Trigger: TAGCCTCTGGGATCTGTGGCACTGATAATCATACCT...ACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS-3UTR GCA 90 bp | TGTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGCCACTGCAATCTCATaGACCACAGTATATTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: CVSCSDLHSLQFNLQGGKATAIS*TTVYSV Trigger: CACGGAATATACTGTGGTGCATGAGATTGCAGTGGC...TTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR GCA 90 bp | TGGAAGTCACATGTATGTCACCACACCCAGGAATGTCTTGTACACACACACACATACCATTTTCCCTCTTaGAACAATCTGAATCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: WKSHVCHHTQECLVHTHTYHFPS*NNLNPS Trigger: TGAAGGATTCAGATTGTTGCAAGAGGGAAAATGGTA...TGTGTGTGTGTGTACAAGACATTCCTGGGTGTGGTGACATACATGTGACTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| 3UTR CAA 72 bp | GAACCCACCATTTGGAAGCACTCATGGGTGGAAAGTTaGCTTTTATCCGTTTACCTTCCTACTTATTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: EPTIWKHSWVES*LLSVYLPTYLF Trigger: GAACAAATAAGTAGGAAGGTAAACGGATAAAAGCAAACTTTCCACCCATGAGTGCTTCCAAATGGTGGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| CDS-3UTR TCA 90 bp | GTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGAATTCCCTTCTAAGGTATaGTTATCAGTGCCACAGATC | + |
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Preference number: 4 (lower is better) Translates to: VSCSDLHSLQFNLQGGKEFPSKV*LSVPQI Trigger: GATCTGTGGCACTGATAATCATACCTTAGAAGGGAA...TTCTTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS-3UTR CCA 90 bp | TGTGTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTATCCTTCATTGATTTTTaGGAAAGGCAGTCTATGGGT | + |
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Preference number: 4 (lower is better) Translates to: CVFPVLISIVCSLISKEVSFIDF*ERQSMG Trigger: ACCCATAGACTGCCTTTCCCAAAAATCAATGAAGGA...TACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR CCA 90 bp | CTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGAAGCATAGAAGATCCTTCATTGATTTTTaGGAAAGGCAGTCTATGGGT | + |
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Preference number: 4 (lower is better) Translates to: LISIVCSLISKEVKKHRRSFIDF*ERQSMG Trigger: ACCCATAGACTGCCTTTCCCAAAAATCAATGAAGGA...TCTTCTATGCTTCTTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR GCA 90 bp | GTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGAAATGCATTTTCCCTCTTaGAACAATCTGAATCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VSCSDLHSLQFNLQGGKEMHFPS*NNLNPS Trigger: TGAAGGATTCAGATTGTTGCAAGAGGGAAAATGCAT...TTCTTTACCTCCTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS GCA 90 bp | AACCTCCTCAATGGACAGCGGGGCATTAGTGGTCCAGGCAACAGCTaGCCGGCATCTGATGACATTGCTGGATGTTTTTGTGGCGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: NLLNGQRGISGPGNS*PASDDIAGCFCGEA Trigger: AGCCTCGCCACAAAAACATCCAGCAATGTCATCAGATGCCGGGCAGCTGTTGCCTGGACCACTAATGCCCCGCTGTCCATTGAGGAGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS GCA 90 bp | CCGAGGAAATTTCTCCTCATTGATGTCAACCCCGATGATTCTACATaGTCCAGAGGCTTTGCAGGCCATGACGATGGCAGAGCCAATTCC | + |
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Preference number: 5 (lower is better) Translates to: PRKFLLIDVNPDDST*SRGFAGHDDGRANS Trigger: GGAATTGGCTCTGCCATCGTCATGGCCTGCAAAGCCTCTGGAGCATGTAGAATCATCGGGGTTGACATCAATGAGGAGAAATTTCCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS GCA 90 bp | CTTCAGCTTGTTAGGGTTGAGACAGTCGGTGACCCCCAAGGCTCTTaGCCGAGGAAATTTCTCCTCATTGATGTCAACCCCGATGATTCT | + |
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Preference number: 5 (lower is better) Translates to: LQLVRVETVGDPQGS*PRKFLLIDVNPDDS Trigger: AGAATCATCGGGGTTGACATCAATGAGGAGAAATTTCCTCGGGCAAGAGCCTTGGGGGTCACCGACTGTCTCAACCCTAACAAGCTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTTTCCTGTTCTGATCTCCATAGTTTGCAGTTTAATCTCCAAGTTCAGCTTGTTAGGGTaGAGACAGTCGGTGACCCCC | + |
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Preference number: 5 (lower is better) Translates to: CVCVFPVLISIVCSLISKFSLLG*RQSVTP Trigger: GGGGGTCACCGACTGTCTCAACCCTAACAAGCTGAA...CTTGGAGATTAAACTGCAAACTATGGAGATCAGAACAGGAAACACACACACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS-3UTR CAA 90 bp | ATAGTTTGCAGTTTAATCTCCAAGGAGGTAAAGAAGCATAGAAGAGCACTGCTGTTCAGCTTGTTAGGGTaGAGACAGTCGGTGACCCCC | + |
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Preference number: 5 (lower is better) Translates to: IVCSLISKEVKKHRRALLFSLLG*RQSVTP Trigger: GGGGGTCACCGACTGTCTCAACCCTAACAAGCTGAA...CAGCAGTGCTCTTCTATGCTTCTTTACCTCCTTGGAGATTAAACTGCAAACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS TCA 90 bp | CCCAGGATGACAGGAAATGGCGTTTTCATTTTCCCTTCTAAGGTATaGTTATCAGTGCCACAGATCCCAGAGGCTATAATCTTAACTCGA | + |
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Preference number: 5 (lower is better) Translates to: PRMTGNGVFIFPSKV*LSVPQIPEAIILTR Trigger: TCGAGTTAAGATTATAGCCTCTGGGATCTGTGGCACTGATAATCATACCTTAGAAGGGAAAATGAAAACGCCATTTCCTGTCATCCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS-3UTR CAA 90 bp | TCCATAACATTTTTCTATTTCCTAACTGTGAACGGCCGTGGGAAGACAATCACTTTACCATTTTCCCTCTaGCAACAATCTGAATCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SITFFYFLTVNGRGKTITLPFSL*QQSESF Trigger: GAAGGATTCAGATTGTTGCAAGAGGGAAAATGGTAA...AGTGATTGTCTTCCCACGGCCGTTCACAGTTAGGAAATAGAAAAATGTTATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090166.5 |
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| CDS CAA 72 bp | GTGGTCCAGGCAACAGCTGCCCGGCATCTGATGACATaGCTGGATGTTTTTGTGGCGAGGCTGGCTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: VVQATAARHLMT*LDVFVARLACS Trigger: GGAACAAGCCAGCCTCGCCACAAAAACATCCAGCAATGTCATCAGATGCCGGGCAGCTGTTGCCTGGACCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS CAA 72 bp | ATGTCAACCCCGATGATTCTACATGCTCCAGAGGCTTaGCAGGCCATGACGATGGCAGAGCCAATTCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: MSTPMILHAPEA*QAMTMAEPIPP Trigger: CGGAGGAATTGGCTCTGCCATCGTCATGGCCTGCAAAGCCTCTGGAGCATGTAGAATCATCGGGGTTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS CAA 72 bp | ATTTCCTTCACCACCTCCTGCACAGGCTTCTTCAGCTaGTTAGGGTTGAGACAGTCGGTGACCCCCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ISFTTSCTGFFS*LGLRQSVTPKA Trigger: AGCCTTGGGGGTCACCGACTGTCTCAACCCTAACAAGCTGAAGAAGCCTGTGCAGGAGGTGGTGAAGGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS CAA 90 bp | CAGTCGGTGACCCCCAAGGCTCTTGCCCGAGGAAATTTCTCCTCATaGATGTCAACCCCGATGATTCTACATGCTCCAGAGGCTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: QSVTPKALARGNFSS*MSTPMILHAPEALQ Trigger: CTGCAAAGCCTCTGGAGCATGTAGAATCATCGGGGTTGACATCAATGAGGAGAAATTTCCTCGGGCAAGAGCCTTGGGGGTCACCGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS CAA 90 bp | ATTTCCTTCACCACCTCCTGCACAGGCTTCTTCAGCTTGTTAGGGTaGAGACAGTCGGTGACCCCCAAGGCTCTTGCCCGAGGAAATTTC | + |
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Preference number: 6 (lower is better) Translates to: ISFTTSCTGFFSLLG*RQSVTPKALARGNF Trigger: GAAATTTCCTCGGGCAAGAGCCTTGGGGGTCACCGACTGTCTCAACCCTAACAAGCTGAAGAAGCCTGTGCAGGAGGTGGTGAAGGAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS CCA 72 bp | CTTCCAGGGAGAAGTACCAATGGGTCAAAAGAGAGCTaGGAACCGGTCGGAGCTACTCCCATAATCACACAC | + |
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Preference number: 6 (lower is better) Translates to: LPGRSTNGSKES*EPVGATPIITH Trigger: GTGTGTGATTATGGGAGTAGCTCCGACCGGTTCCCAGCTCTCTTTTGACCCATTGGTACTTCTCCCTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS CAA 90 bp | TCCTCATTGATGTCAACCCCGATGATTCTACATGCTCCAGAGGCTTaGCAGGCCATGACGATGGCAGAGCCAATTCCTCCGAGTCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SSLMSTPMILHAPEA*QAMTMAEPIPPSPN Trigger: GTTTGGACTCGGAGGAATTGGCTCTGCCATCGTCATGGCCTGCAAAGCCTCTGGAGCATGTAGAATCATCGGGGTTGACATCAATGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS GCA 72 bp | TTTCTCCTCATTGATGTCAACCCCGATGATTCTACATaGTCCAGAGGCTTTGCAGGCCATGACGATGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: FLLIDVNPDDST*SRGFAGHDDGR Trigger: TCTGCCATCGTCATGGCCTGCAAAGCCTCTGGAGCATGTAGAATCATCGGGGTTGACATCAATGAGGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS TCA 72 bp | TATTGCATGACTTCAAAGCCGCAACCATGGTTTCAATaGGTCCGATGGCCTCAAAGGCAAAGTCAACACCAA | + |
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Preference number: 6 (lower is better) Translates to: YCMTSKPQPWFQ*VRWPQRQSQHQ Trigger: TTGGTGTTGACTTTGCCTTTGAGGCCATCGGACTCATTGAAACCATGGTTGCGGCTTTGAAGTCATGCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090166.5 ENSMUST00000199673.6 |
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| CDS TCA 72 bp | ACAGGAAATGGCGTTTTCATTTTCCCTTCTAAGGTATaGTTATCAGTGCCACAGATCCCAGAGGCTATAATC | + |
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Preference number: 6 (lower is better) Translates to: TGNGVFIFPSKV*LSVPQIPEAII Trigger: GATTATAGCCTCTGGGATCTGTGGCACTGATAATCATACCTTAGAAGGGAAAATGAAAACGCCATTTCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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| CDS CAA 90 bp | ACACAACGGATGCATTTTCCCTCTTGCAACAATCTGAATCCTTCATaGATTTTTGGGAAAGGCAGTCTATGGGTTATAAGAGGATCTATA | + |
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Preference number: 6 (lower is better) Translates to: TQRMHFPSCNNLNPS*IFGKGSLWVIRGSI Trigger: TATAGATCCTCTTATAACCCATAGACTGCCTTTCCCAAAAATCAATGAAGGATTCAGATTGTTGCAAGAGGGAAAATGCATCCGTTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199673.6 |
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