Pregenerated sensors for ADH6A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053054Ensembl transcript IDs: ENSMUST00000013455.13, ENSMUST00000106247.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGACAGTTAGAACTATTTGTAGCCAATGCAGAGGGCTGCAGGGATaGAGTCCTTGTGGATCATCACCCATGCTGAGGGGGCTTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: GTVRTICSQCRGLQG*SPCGSSPMLRGLLC Trigger: ACAGAGAAGCCCCCTCAGCATGGGTGATGATCCACAAGGACTGCATCCCTGCAGCCCTCTGCATTGGCTACAAATAGTTCTAACTGTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR TCA 90 bp | ATGCAGTCCTTGTGGATCATCACCCATGCTGAGGGGGCTTCTCTGTaGTGCAGCTGCTTGAGAGTCATCCCTGTTCCTGTGAATAACCCT | + |
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Preference number: 1 (lower is better) Translates to: MQSLWIITHAEGASL*CSCLRVIPVPVNNP Trigger: AGGGTTATTCACAGGAACAGGGATGACTCTCAAGCAGCTGCATCACAGAGAAGCCCCCTCAGCATGGGTGATGATCCACAAGGACTGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR-3UTR CCA 90 bp | CAATGCAGAGGGCTGCAGGGATGCAGTCCTTGTGGATCATCACCCATGCTGAGGAGCTGTGCCGATATGTaGATTGAGCATCATTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: QCRGLQGCSPCGSSPMLRSCADM*IEHHSE Trigger: TTCTGAATGATGCTCAATCCACATATCGGCACAGCT...CCTCAGCATGGGTGATGATCCACAAGGACTGCATCCCTGCAGCCCTCTGCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR-3UTR TCA 90 bp | AAAATTAAGCAAATGAAGTATGCAGGCAGGGTTGGGTGGGAACGTGTGATGAACGAGGGGGCTTCTCTGTaGTGCAGCTGCTTGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: KIKQMKYAGRVGWERVMNEGASL*CSCLRV Trigger: GACTCTCAAGCAGCTGCATCACAGAGAAGCCCCCTC...GTTCATCACACGTTCCCACCCAACCCTGCCTGCATACTTCATTTGCTTAATTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR-3UTR GCA 90 bp | GTGGGAACGTGTGATGAACTAGAGACCTGCTTCAAGGTGAAACAAGAAAAGCACACTATTTGTAGCCAATaGAGAGGGCTGCAGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: VGTCDELETCFKVKQEKHTICSQ*RGLQGC Trigger: GCATCCCTGCAGCCCTCTGCATTGGCTACAAATAGT...GTGCTTTTCTTGTTTCACCTTGAAGCAGGTCTCTAGTTCATCACACGTTCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGCACTTTCAGGGCAGCTTTGATTGGTTCTTTACTGTTTGTAACTTGCTCGTTCCCTTTCTGGGGTaGGTAGGGGTGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: EKHFQGSFDWFFTVCNLLVPFLG*VGVCVC Trigger: ACACACACACACCCCTACTCACCCCAGAAAGGGAAC...GAGCAAGTTACAAACAGTAAAGAACCAATCAAAGCTGCCCTGAAAGTGCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR-3UTR GCA 90 bp | GGAAGACAATTGATGGTCAGTTGTCTCCAAATTGAAACATTTGTTCCCAGAGGGAGAGGGCTGCAGGGATaGAGTCCTTGTGGATCATCA | + |
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Preference number: 2 (lower is better) Translates to: GRQLMVSCLQIETFVPRGRGLQG*SPCGSS Trigger: TGATGATCCACAAGGACTGCATCCCTGCAGCCCTCT...CCCTCTGGGAACAAATGTTTCAATTTGGAGACAACTGACCATCAATTGTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGCACTTTCAGGGCAGCTTTGATTGGTTCTTTACTGTTTGTAACTTGCTCTCATCCCTGTTCCTGTaGATAACCCTGTGCCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: EKHFQGSFDWFFTVCNLLSSLFL*ITLCPC Trigger: ACAGGGGCACAGGGTTATTCACAGGAACAGGGATGA...GAGCAAGTTACAAACAGTAAAGAACCAATCAAAGCTGCCCTGAAAGTGCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR CAA 90 bp | AAGCACTTTCAGGGCAGCTTTGATTGGTTCTTTACTGTTTGTAACTaGCTCTACACTGACTCTGCAACACTTGTAGCACTCCTGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: KHFQGSFDWFFTVCN*LYTDSATLVALLED Trigger: GTCTTCCAGGAGTGCTACAAGTGTTGCAGAGTCAGTGTAGAGCAAGTTACAAACAGTAAAGAACCAATCAAAGCTGCCCTGAAAGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR-3UTR TCA 90 bp | TGTCTAATACAAGTCCCCAGGAAATCTCTCACACAAGTCTGCCATCAATTCTTGTGCCGATATGTGGATTaGGCATCATTCAGAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: CLIQVPRKSLTQVCHQFLCRYVD*ASFRKD Trigger: ATCTTTTCTGAATGATGCTCAATCCACATATCGGCA...CAAGAATTGATGGCAGACTTGTGTGAGAGATTTCCTGGGGACTTGTATTAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR CAA 90 bp | ATACAAGTCCCCAGGAAATCTCTCACACAAGTCTGCCATCAATTCTaGAGCATTAAAAGAACATGTAAGCAGATTAGTACTGAAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: IQVPRKSLTQVCHQF*SIKRTCKQISTEGA Trigger: TGCTCCTTCAGTACTAATCTGCTTACATGTTCTTTTAATGCTCAAGAATTGATGGCAGACTTGTGTGAGAGATTTCCTGGGGACTTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGCACTTTCAGGGCAGCTTTGATTGGTTCTTTACTGTTTGTAACTTGCTCATCCTTCTGAAATTCTaGAGTTGGTTGTGTAGATGT | + |
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Preference number: 2 (lower is better) Translates to: EKHFQGSFDWFFTVCNLLILLKF*SWLCRC Trigger: ACATCTACACAACCAACTTCAGAATTTCAGAAGGAT...GAGCAAGTTACAAACAGTAAAGAACCAATCAAAGCTGCCCTGAAAGTGCTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR TCA 72 bp | TTGTGGATCATCACCCATGCTGAGGGGGCTTCTCTGTaGTGCAGCTGCTTGAGAGTCATCCCTGTTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: LWIITHAEGASL*CSCLRVIPVPV Trigger: CACAGGAACAGGGATGACTCTCAAGCAGCTGCATCACAGAGAAGCCCCCTCAGCATGGGTGATGATCCACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR GCA 72 bp | AGAACTATTTGTAGCCAATGCAGAGGGCTGCAGGGATaGAGTCCTTGTGGATCATCACCCATGCTGAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: RTICSQCRGLQG*SPCGSSPMLRG Trigger: CCCCCTCAGCATGGGTGATGATCCACAAGGACTGCATCCCTGCAGCCCTCTGCATTGGCTACAAATAGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR GCA 72 bp | GGACAGTTAGAACTATTTGTAGCCAATGCAGAGGGCTaGAGGGATGCAGTCCTTGTGGATCATCACCCATGC | + |
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Preference number: 3 (lower is better) Translates to: GQLELFVANAEG*RDAVLVDHHPC Trigger: GCATGGGTGATGATCCACAAGGACTGCATCCCTGCAGCCCTCTGCATTGGCTACAAATAGTTCTAACTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR GCA 72 bp | AGCAGATTAGTACTGAAGGAGCAAATGAAGCGGACCTaGAGCTGTGCCGATATGTGGATTGAGCATCATTCA | + |
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Preference number: 3 (lower is better) Translates to: SRLVLKEQMKRT*SCADMWIEHHS Trigger: TGAATGATGCTCAATCCACATATCGGCACAGCTGCAGGTCCGCTTCATTTGCTCCTTCAGTACTAATCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR GCA 72 bp | CAGGGTTGGGTGGGAACGTGTGATGAACTAGAGACCTaGTTCAAGGTGAAACAAGAAAAGCACAACAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: QGWVGTCDELET*FKVKQEKHNKK Trigger: TTTCTTGTTGTGCTTTTCTTGTTTCACCTTGAAGCAGGTCTCTAGTTCATCACACGTTCCCACCCAACCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR-3UTR CAA 90 bp | GTGGGAACGTGTGATGAACTAGAGACCTGCTTCAAGGTGAAACAAGAAAAGCACTCAGTTGTCTCCAAATaGAAACATTTGTTCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: VGTCDELETCFKVKQEKHSVVSK*KHLFPE Trigger: CTCTGGGAACAAATGTTTCAATTTGGAGACAACTGA...GTGCTTTTCTTGTTTCACCTTGAAGCAGGTCTCTAGTTCATCACACGTTCCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR TCA 72 bp | GACTCTGCAACACTTGTAGCACTCCTGGAAGACAATTaGTGGTCAGTTGTCTCCAAATTGAAACATTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: DSATLVALLEDN*WSVVSKLKHLF Trigger: GAACAAATGTTTCAATTTGGAGACAACTGACCATCAATTGTCTTCCAGGAGTGCTACAAGTGTTGCAGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR GCA 90 bp | CTGCTCAGGGAGGTGAAACAGGAAGGAAGGAAAGCCCTTCTGGTTGCTCCCGAGTCCATCACAACCTCCTaGACAGGCTTCTCCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LLREVKQEGRKALLVAPESITTS*TGFSSL Trigger: CAAGCTGGAGAAGCCTGTGCAGGAGGTTGTGATGGA...CTCGGGAGCAACCAGAAGGGCTTTCCTTCCTTCCTGTTTCACCTCCCTGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR TCA 90 bp | CTGCTCAGGGAGGTGAAACAGGAAGGAAGGAAAGCCCTTCTGGTTGCTCCCGAGACGGATGGCTTTTCCTaGATGAAACAGCTCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LLREVKQEGRKALLVAPETDGFS*MKQLQG Trigger: GCCTTGGAGCTGTTTCATTCAGGAAAAGCCATCCGT...CTCGGGAGCAACCAGAAGGGCTTTCCTTCCTTCCTGTTTCACCTCCCTGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR GCA 90 bp | CTGCTCAGGGAGGTGAAACAGGAAGGAAGGAAAGCCCTTCTGGTTGCTCCCGAGAAATTTCCTTTGGGGTaGAAGCAGGCGTCACATTCT | + |
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Preference number: 4 (lower is better) Translates to: LLREVKQEGRKALLVAPEKFPLG*KQASHS Trigger: AGAATGTGACGCCTGCTTGCACCCCAAAGGAAATTT...CTCGGGAGCAACCAGAAGGGCTTTCCTTCCTTCCTGTTTCACCTCCCTGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR GCA 90 bp | CTAGAAGTCCTCGTTTCAGGAGAACAGCTGCACTCTGTTTCTGTCTCTTCCCGCCCCGATGATTCTAGATaGACCAGAGGCTTTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LEVLVSGEQLHSVSVSSRPDDSR*TRGFAA Trigger: GGCTGCAAAGCCTCTGGTGCATCTAGAATCATCGGG...GCGGGAAGAGACAGAAACAGAGTGCAGCTGTTCTCCTGAAACGAGGACTTCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR GCA 90 bp | GTATGGTCTAGAAGTCCTCGTTTCAGGAGAACAGCTGCACTCTGTTTCTGTCTCGACCCCCAAGGCTCTTaGCCGAGGAAACTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VWSRSPRFRRTAALCFCLDPQGS*PRKLLL Trigger: GAGGAGAAGTTTCCTCGGGCAAGAGCCTTGGGGGTC...GAGACAGAAACAGAGTGCAGCTGTTCTCCTGAAACGAGGACTTCTAGACCATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR TCA 90 bp | GAAGTCCTCGTTTCAGGAGAACAGCTGCACTCTGTTTCTGTCTCTTCCCGCTGCATTCCCGCTCCTTCATaGCCCGGAATTAAAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: EVLVSGEQLHSVSVSSRCIPAPS*PGIKGK Trigger: CTTTCCTTTAATTCCGGGTCATGAAGGAGCGGGAAT...GCAGCGGGAAGAGACAGAAACAGAGTGCAGCTGTTCTCCTGAAACGAGGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR GCA 90 bp | CTAGAAGTCCTCGTTTCAGGAGAACAGCTGCACTCTGTTTCTGTCTCTTCCCGCCGCCATAGCTGTTGTTaGAGGAGTTCCAAGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LEVLVSGEQLHSVSVSSRRHSCC*RSSKQQ Trigger: TTGCTGCTTGGAACTCCTGCAACAACAGCTATGGCG...GCGGGAAGAGACAGAAACAGAGTGCAGCTGTTCTCCTGAAACGAGGACTTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR CCA 90 bp | CAGGAAGGAAGGAAAGCCCTTCTGGTTGCTCCCGAGCTCTTCTTTATCACTGAGAGCAGAAATTTCCTTTaGGGTGCAAGCAGGCGTCAC | + |
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Preference number: 4 (lower is better) Translates to: QEGRKALLVAPELFFITESRNFL*GASRRH Trigger: GTGACGCCTGCTTGCACCCCAAAGGAAATTTCTGCT...CTCAGTGATAAAGAAGAGCTCGGGAGCAACCAGAAGGGCTTTCCTTCCTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR CCA 90 bp | CTAGAAGTCCTCGTTTCAGGAGAACAGCTGCACTCTGTTTCTGTCTCTTCCCGCAGCTCCAAGGCTTCATaGAGCTGGTTAAAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LEVLVSGEQLHSVSVSSRSSKAS*SWLKGS Trigger: GCTGCCTTTTAACCAGCTCCATGAAGCCTTGGAGCT...GCGGGAAGAGACAGAAACAGAGTGCAGCTGTTCTCCTGAAACGAGGACTTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR CCA 90 bp | CTGTCTCTTCCCGCTGCTCAGGGAGGTGAAACAGGAAGGAAGGAAAGCCCTTCTTATCAACCAGTCCAATaGCCTCAAAGGCAAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LSLPAAQGGETGRKESPSYQPVQ*PQRQSQ Trigger: TTGACTTTGCCTTTGAGGCCATTGGACTGGTTGATA...AGAAGGGCTTTCCTTCCTTCCTGTTTCACCTCCCTGAGCAGCGGGAAGAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR TCA 90 bp | GAAACAGGAAGGAAGGAAAGCCCTTCTGGTTGCTCCCGAGCTCTTCTTTATCACTCTCCTTTCAGCACGTaGTCATCAGAACCACAGATC | + |
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Preference number: 4 (lower is better) Translates to: ETGRKESPSGCSRALLYHSPFST*SSEPQI Trigger: GATCTGTGGTTCTGATGATCACGTGCTGAAAGGAGA...GTGATAAAGAAGAGCTCGGGAGCAACCAGAAGGGCTTTCCTTCCTTCCTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR GCA 90 bp | GTGGGAACGTGTGATGAACTAGAGACCTGCTTCAAGGTGAAACAAGAAAAGCACCCCGATGATTCTAGATaGACCAGAGGCTTTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VGTCDELETCFKVKQEKHPDDSR*TRGFAA Trigger: GGCTGCAAAGCCTCTGGTGCATCTAGAATCATCGGG...GTGCTTTTCTTGTTTCACCTTGAAGCAGGTCTCTAGTTCATCACACGTTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR GCA 90 bp | GGAAGACAATTGATGGTCAGTTGTCTCCAAATTGAAACATTTGTTCCCAGAGGGGACCCCCAAGGCTCTTaGCCGAGGAAACTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GRQLMVSCLQIETFVPRGDPQGS*PRKLLL Trigger: GAGGAGAAGTTTCCTCGGGCAAGAGCCTTGGGGGTC...CCCTCTGGGAACAAATGTTTCAATTTGGAGACAACTGACCATCAATTGTCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR CCA 90 bp | GAAGTCCTCGTTTCAGGAGAACAGCTGCACTCTGTTTCTGTCTCTTCCCGCTGCTATCTCCTGGTTTCATaGAGCAAACTCCATCACCAA | + |
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Preference number: 4 (lower is better) Translates to: EVLVSGEQLHSVSVSSRCYLLVS*SKLHHQ Trigger: TTGGTGATGGAGTTTGCTCCATGAAACCAGGAGATA...GCAGCGGGAAGAGACAGAAACAGAGTGCAGCTGTTCTCCTGAAACGAGGACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR CCA 90 bp | GAAACAGGAAGGAAGGAAAGCCCTTCTGGTTGCTCCCGAGCTCTTCTTTATCACGAGGACTTTATCTCCTaGTTTCATGGAGCAAACTCC | + |
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Preference number: 4 (lower is better) Translates to: ETGRKESPSGCSRALLYHEDFIS*FHGANS Trigger: GGAGTTTGCTCCATGAAACCAGGAGATAAAGTCCTC...GTGATAAAGAAGAGCTCGGGAGCAACCAGAAGGGCTTTCCTTCCTTCCTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR CCA 90 bp | GTGGGAACGTGTGATGAACTAGAGACCTGCTTCAAGGTGAAACAAGAAAAGCACAGCAGAAATTTCCTTTaGGGTGCAAGCAGGCGTCAC | + |
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Preference number: 4 (lower is better) Translates to: VGTCDELETCFKVKQEKHSRNFL*GASRRH Trigger: GTGACGCCTGCTTGCACCCCAAAGGAAATTTCTGCT...GTGCTTTTCTTGTTTCACCTTGAAGCAGGTCTCTAGTTCATCACACGTTCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR TCA 90 bp | GTGGGAACGTGTGATGAACTAGAGACCTGCTTCAAGGTGAAACAAGAAAAGCACTCTCCTTTCAGCACGTaGTCATCAGAACCACAGATC | + |
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Preference number: 4 (lower is better) Translates to: VGTCDELETCFKVKQEKHSPFST*SSEPQI Trigger: GATCTGTGGTTCTGATGATCACGTGCTGAAAGGAGA...GTGCTTTTCTTGTTTCACCTTGAAGCAGGTCTCTAGTTCATCACACGTTCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR CCA 90 bp | GTATGGTCTAGAAGTCCTCGTTTCAGGAGAACAGCTGCACTCTGTTTCTGTCTCGGGGTATGCAGTCTCTaGTTTTATAATCTCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: VWSRSPRFRRTAALCFCLGVCSL*FYNLPD Trigger: GTCTGGGAGATTATAAAACCAGAGACTGCATACCCC...GAGACAGAAACAGAGTGCAGCTGTTCTCCTGAAACGAGGACTTCTAGACCATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR CCA 90 bp | GAAACAGGAAGGAAGGAAAGCCCTTCTGGTTGCTCCCGAGCTCTTCTTTATCACGCAGAACACAACGGATaGCTTTTCCTGAATGAAACA | + |
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Preference number: 4 (lower is better) Translates to: ETGRKESPSGCSRALLYHAEHNG*LFLNET Trigger: TGTTTCATTCAGGAAAAGCCATCCGTTGTGTTCTGC...GTGATAAAGAAGAGCTCGGGAGCAACCAGAAGGGCTTTCCTTCCTTCCTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR TCA 90 bp | AAAATTAAGCAAATGAAGTATGCAGGCAGGGTTGGGTGGGAACGTGTGATGAACATTCCCGCTCCTTCATaGCCCGGAATTAAAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KIKQMKYAGRVGWERVMNIPAPS*PGIKGK Trigger: CTTTCCTTTAATTCCGGGTCATGAAGGAGCGGGAAT...GTTCATCACACGTTCCCACCCAACCCTGCCTGCATACTTCATTTGCTTAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR TCA 90 bp | TTAAAAGAACATGTAAGCAGATTAGTACTGAAGGAGCAAATGAAGCGGACCTGCCCACAGTGTACTCTGTaGATGAGCTTGTTCGGAACG | + |
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Preference number: 4 (lower is better) Translates to: LKEHVSRLVLKEQMKRTCPQCTL*MSLFGT Trigger: CGTTCCGAACAAGCTCATTCACAGAGTACACTGTGG...GCAGGTCCGCTTCATTTGCTCCTTCAGTACTAATCTGCTTACATGTTCTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR GCA 90 bp | GTGCCGATATGTGGATTGAGCATCATTCAGAAAAGATGTGTAAGAATTTGTGCCCGCCATAGCTGTTGTTaGAGGAGTTCCAAGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: VPICGLSIIQKRCVRICARHSCC*RSSKQQ Trigger: TTGCTGCTTGGAACTCCTGCAACAACAGCTATGGCG...GGCACAAATTCTTACACATCTTTTCTGAATGATGCTCAATCCACATATCGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR CCA 90 bp | GAAAAGCACTTTCAGGGCAGCTTTGATTGGTTCTTTACTGTTTGTAACTTGCTCAGCTCCAAGGCTTCATaGAGCTGGTTAAAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: EKHFQGSFDWFFTVCNLLSSKAS*SWLKGS Trigger: GCTGCCTTTTAACCAGCTCCATGAAGCCTTGGAGCT...GAGCAAGTTACAAACAGTAAAGAACCAATCAAAGCTGCCCTGAAAGTGCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| 3UTR CAA 72 bp | CAGGGCAGCTTTGATTGGTTCTTTACTGTTTGTAACTaGCTCTACACTGACTCTGCAACACTTGTAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: QGSFDWFFTVCN*LYTDSATLVAL Trigger: GAGTGCTACAAGTGTTGCAGAGTCAGTGTAGAGCAAGTTACAAACAGTAAAGAACCAATCAAAGCTGCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR GCA 90 bp | ATATGTGGATTGAGCATCATTCAGAAAAGATGTGTAAGAATTTGTGCCCTTAGCTCCATCACAACCTCCTaGACAGGCTTCTCCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: ICGLSIIQKRCVRICALSSITTS*TGFSSL Trigger: CAAGCTGGAGAAGCCTGTGCAGGAGGTTGTGATGGA...GCTAAGGGCACAAATTCTTACACATCTTTTCTGAATGATGCTCAATCCACATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR CCA 90 bp | AAAATTAAGCAAATGAAGTATGCAGGCAGGGTTGGGTGGGAACGTGTGATGAACTATCTCCTGGTTTCATaGAGCAAACTCCATCACCAA | + |
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Preference number: 4 (lower is better) Translates to: KIKQMKYAGRVGWERVMNYLLVS*SKLHHQ Trigger: TTGGTGATGGAGTTTGCTCCATGAAACCAGGAGATA...GTTCATCACACGTTCCCACCCAACCCTGCCTGCATACTTCATTTGCTTAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR CCA 90 bp | GGAAGACAATTGATGGTCAGTTGTCTCCAAATTGAAACATTTGTTCCCAGAGGGGAGGACTTTATCTCCTaGTTTCATGGAGCAAACTCC | + |
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Preference number: 4 (lower is better) Translates to: GRQLMVSCLQIETFVPRGEDFIS*FHGANS Trigger: GGAGTTTGCTCCATGAAACCAGGAGATAAAGTCCTC...CCCTCTGGGAACAAATGTTTCAATTTGGAGACAACTGACCATCAATTGTCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR GCA 90 bp | GAAAAGCACTTTCAGGGCAGCTTTGATTGGTTCTTTACTGTTTGTAACTTGCTCAAATTTCCTTTGGGGTaGAAGCAGGCGTCACATTCT | + |
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Preference number: 4 (lower is better) Translates to: EKHFQGSFDWFFTVCNLLKFPLG*KQASHS Trigger: AGAATGTGACGCCTGCTTGCACCCCAAAGGAAATTT...GAGCAAGTTACAAACAGTAAAGAACCAATCAAAGCTGCCCTGAAAGTGCTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR CCA 90 bp | TTAAAAGAACATGTAAGCAGATTAGTACTGAAGGAGCAAATGAAGCGGACCTGCGGGGTATGCAGTCTCTaGTTTTATAATCTCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LKEHVSRLVLKEQMKRTCGVCSL*FYNLPD Trigger: GTCTGGGAGATTATAAAACCAGAGACTGCATACCCC...GCAGGTCCGCTTCATTTGCTCCTTCAGTACTAATCTGCTTACATGTTCTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR CCA 90 bp | AAGATACTAAGGGTTCAAGTTCATACCCCGCCCCCACTTAATGAAATATCTGACACATTCTCTACACTGTaGAATAATGAGGATGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KILRVQVHTPPPLNEISDTFSTL*NNEDED Trigger: GTCCTCATCCTCATTATTCCACAGTGTAGAGAATGT...GTCAGATATTTCATTAAGTGGGGGCGGGGTATGAACTTGAACCCTTAGTATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR CCA 90 bp | GTGCCGATATGTGGATTGAGCATCATTCAGAAAAGATGTGTAAGAATTTGTGCCTATCAACCAGTCCAATaGCCTCAAAGGCAAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: VPICGLSIIQKRCVRICAYQPVQ*PQRQSQ Trigger: TTGACTTTGCCTTTGAGGCCATTGGACTGGTTGATA...GGCACAAATTCTTACACATCTTTTCTGAATGATGCTCAATCCACATATCGGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR GCA 90 bp | GAAAAGCACTTTCAGGGCAGCTTTGATTGGTTCTTTACTGTTTGTAACTTGCTCTTCGGTGGCTCAACTTaGACTTCTTCAATTGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: EKHFQGSFDWFFTVCNLLFGGST*TSSIER Trigger: TCTTTCAATTGAAGAAGTGCAAGTTGAGCCACCGAA...GAGCAAGTTACAAACAGTAAAGAACCAATCAAAGCTGCCCTGAAAGTGCTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR GCA 90 bp | TTTTATTATCAGTATGGTCTAGAAGTCCTCGTTTCAGGAGAACAGCTGCACTCTTTCGGTGGCTCAACTTaGACTTCTTCAATTGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: FYYQYGLEVLVSGEQLHSFGGST*TSSIER Trigger: TCTTTCAATTGAAGAAGTGCAAGTTGAGCCACCGAA...AGAGTGCAGCTGTTCTCCTGAAACGAGGACTTCTAGACCATACTGATAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR GCA 90 bp | GTGCCGATATGTGGATTGAGCATCATTCAGAAAAGATGTGTAAGAATTTGTGCCTTTATCCATAGGAGCTaGGTCATCAATTTTTACCGC | + |
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Preference number: 4 (lower is better) Translates to: VPICGLSIIQKRCVRICAFIHRS*VINFYR Trigger: GCGGTAAAAATTGATGACGCAGCTCCTATGGATAAA...GGCACAAATTCTTACACATCTTTTCTGAATGATGCTCAATCCACATATCGGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS GCA 90 bp | CTCCAGCTTGTTAGGGTTGAGACAGTCGGTGACCCCCAAGGCTCTTaGCCGAGGAAACTTCTCCTCATTGATGTCAACCCCGATGATTCT | + |
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Preference number: 5 (lower is better) Translates to: LQLVRVETVGDPQGS*PRKLLLIDVNPDDS Trigger: AGAATCATCGGGGTTGACATCAATGAGGAGAAGTTTCCTCGGGCAAGAGCCTTGGGGGTCACCGACTGTCTCAACCCTAACAAGCTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS GCA 90 bp | AAGGCAAAGTCAACACCGACACCCGTCATTTCCATCACAACCTCCTaGACAGGCTTCTCCAGCTTGTTAGGGTTGAGACAGTCGGTGACC | + |
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Preference number: 5 (lower is better) Translates to: KAKSTPTPVISITTS*TGFSSLLGLRQSVT Trigger: GGTCACCGACTGTCTCAACCCTAACAAGCTGGAGAAGCCTGTGCAGGAGGTTGTGATGGAAATGACGGGTGTCGGTGTTGACTTTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CCA 90 bp | AATCTCCCAGACACACGCCCTTCAGGGTTTTCCCAGACAAAATCTTaGGTGCTTCAAGGGATAACTGTGCATCTGATGGAGCGAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: NLPDTRPSGFSQTKS*VLQGITVHLMERAQ Trigger: CTGGGCTCGCTCCATCAGATGCACAGTTATCCCTTGAAGCACCCAAGATTTTGTCTGGGAAAACCCTGAAGGGCGTGTGTCTGGGAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CCA 90 bp | GACAGACGCCATAGCTGTTGTTGCAGGAGTTCCAAGCAGCAACCATaGTATCAACCAGTCCAATGGCCTCAAAGGCAAAGTCAACACCGA | + |
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Preference number: 5 (lower is better) Translates to: DRRHSCCCRSSKQQP*YQPVQWPQRQSQHR Trigger: TCGGTGTTGACTTTGCCTTTGAGGCCATTGGACTGGTTGATACCATGGTTGCTGCTTGGAACTCCTGCAACAACAGCTATGGCGTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCAGGGAGGTGAAACAGGAAGGAAGGAAAGCCCTTCTGGTTGCTCCCGAGATAATCAGTCACTATTaGGGGTATGCAGTCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: LLREVKQEGRKALLVAPEIISHY*GYAVSG Trigger: ACCAGAGACTGCATACCCCAAATAGTGACTGATTAT...CTCGGGAGCAACCAGAAGGGCTTTCCTTCCTTCCTGTTTCACCTCCCTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS CCA 90 bp | TGTTGCAGGAGTTCCAAGCAGCAACCATGGTATCAACCAGTCCAATaGCCTCAAAGGCAAAGTCAACACCGACACCCGTCATTTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: CCRSSKQQPWYQPVQ*PQRQSQHRHPSFPS Trigger: TGATGGAAATGACGGGTGTCGGTGTTGACTTTGCCTTTGAGGCCATTGGACTGGTTGATACCATGGTTGCTGCTTGGAACTCCTGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS-3UTR CAA 90 bp | AAAATTAAGCAAATGAAGTATGCAGGCAGGGTTGGGTGGGAACGTGTGATGAACTCCAGCTTGTTAGGGTaGAGACAGTCGGTGACCCCC | + |
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Preference number: 5 (lower is better) Translates to: KIKQMKYAGRVGWERVMNSSLLG*RQSVTP Trigger: GGGGGTCACCGACTGTCTCAACCCTAACAAGCTGGA...GTTCATCACACGTTCCCACCCAACCCTGCCTGCATACTTCATTTGCTTAATTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS GCA 90 bp | AGTAGGGAAGCCACAGCTTATGAGACAAACTTTATCCATAGGAGCTaGGTCATCAATTTTTACCGCGGCGATCTCGGGCACCACAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: SREATAYETNFIHRS*VINFYRGDLGHHSV Trigger: TACACTGTGGTGCCCGAGATCGCCGCGGTAAAAATTGATGACGCAGCTCCTATGGATAAAGTTTGTCTCATAAGCTGTGGCTTCCCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS-3UTR CAA 90 bp | AAGTCCTCGTTTCAGGAGAACAGCTGCACTCTGTTTCTGTCTCTTCCCGCTGCTGGAAACTTCTCCTCATaGATGTCAACCCCGATGATT | + |
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Preference number: 5 (lower is better) Translates to: KSSFQENSCTLFLSLPAAGNFSS*MSTPMI Trigger: AATCATCGGGGTTGACATCAATGAGGAGAAGTTTCC...AGCAGCGGGAAGAGACAGAAACAGAGTGCAGCTGTTCTCCTGAAACGAGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS-3UTR CAA 90 bp | AAGTCCTCGTTTCAGGAGAACAGCTGCACTCTGTTTCTGTCTCTTCCCGCTGCTACAAGGCAGAACATCTaGCTTGTAGCAGAAATTTCC | + |
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Preference number: 5 (lower is better) Translates to: KSSFQENSCTLFLSLPAATRQNI*LVAEIS Trigger: GGAAATTTCTGCTACAAGCAAGATGTTCTGCCTTGT...AGCAGCGGGAAGAGACAGAAACAGAGTGCAGCTGTTCTCCTGAAACGAGGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS CCA 90 bp | GAAATTTCCTTTGGGGTGCAAGCAGGCGTCACATTCTCTACACTGTaGAATAATGAGGATGAGGACTTTATCTCCTGGTTTCATGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: EISFGVQAGVTFSTL*NNEDEDFISWFHGA Trigger: TGCTCCATGAAACCAGGAGATAAAGTCCTCATCCTCATTATTCCACAGTGTAGAGAATGTGACGCCTGCTTGCACCCCAAAGGAAATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS-3UTR CAA 90 bp | TGTCTAATACAAGTCCCCAGGAAATCTCTCACACAAGTCTGCCATCAATTCTTGGGAAACTTCTCCTCATaGATGTCAACCCCGATGATT | + |
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Preference number: 5 (lower is better) Translates to: CLIQVPRKSLTQVCHQFLGNFSS*MSTPMI Trigger: AATCATCGGGGTTGACATCAATGAGGAGAAGTTTCC...CAAGAATTGATGGCAGACTTGTGTGAGAGATTTCCTGGGGACTTGTATTAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR CAA 90 bp | TTAAAAGAACATGTAAGCAGATTAGTACTGAAGGAGCAAATGAAGCGGACCTGCACAAGGCAGAACATCTaGCTTGTAGCAGAAATTTCC | + |
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Preference number: 5 (lower is better) Translates to: LKEHVSRLVLKEQMKRTCTRQNI*LVAEIS Trigger: GGAAATTTCTGCTACAAGCAAGATGTTCTGCCTTGT...GCAGGTCCGCTTCATTTGCTCCTTCAGTACTAATCTGCTTACATGTTCTTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS-3UTR CAA 90 bp | GAAAAGCACTTTCAGGGCAGCTTTGATTGGTTCTTTACTGTTTGTAACTTGCTCATAATCAGTCACTATTaGGGGTATGCAGTCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: EKHFQGSFDWFFTVCNLLIISHY*GYAVSG Trigger: ACCAGAGACTGCATACCCCAAATAGTGACTGATTAT...GAGCAAGTTACAAACAGTAAAGAACCAATCAAAGCTGCCCTGAAAGTGCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013455.13 |
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| CDS CAA 72 bp | ACAACCTCCTGCACAGGCTTCTCCAGCTTGTTAGGGTaGAGACAGTCGGTGACCCCCAAGGCTCTTGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: TTSCTGFSSLLG*RQSVTPKALAR Trigger: TCGGGCAAGAGCCTTGGGGGTCACCGACTGTCTCAACCCTAACAAGCTGGAGAAGCCTGTGCAGGAGGTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CAA 90 bp | ACACCCGTCATTTCCATCACAACCTCCTGCACAGGCTTCTCCAGCTaGTTAGGGTTGAGACAGTCGGTGACCCCCAAGGCTCTTGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: TPVISITTSCTGFSS*LGLRQSVTPKALAR Trigger: TCGGGCAAGAGCCTTGGGGGTCACCGACTGTCTCAACCCTAACAAGCTGGAGAAGCCTGTGCAGGAGGTTGTGATGGAAATGACGGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CAA 90 bp | CCGGGAGGTCCCGTCGAGCATCACCCCAGAACAAGGCAGAACATCTaGCTTGTAGCAGAAATTTCCTTTGGGGTGCAAGCAGGCGTCACA | + |
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Preference number: 6 (lower is better) Translates to: PGGPVEHHPRTRQNI*LVAEISFGVQAGVT Trigger: TGTGACGCCTGCTTGCACCCCAAAGGAAATTTCTGCTACAAGCAAGATGTTCTGCCTTGTTCTGGGGTGATGCTCGACGGGACCTCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CAA 90 bp | CAGTCGGTGACCCCCAAGGCTCTTGCCCGAGGAAACTTCTCCTCATaGATGTCAACCCCGATGATTCTAGATGCACCAGAGGCTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: QSVTPKALARGNFSS*MSTPMILDAPEALQ Trigger: CTGCAAAGCCTCTGGTGCATCTAGAATCATCGGGGTTGACATCAATGAGGAGAAGTTTCCTCGGGCAAGAGCCTTGGGGGTCACCGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CAA 90 bp | ATTTCCATCACAACCTCCTGCACAGGCTTCTCCAGCTTGTTAGGGTaGAGACAGTCGGTGACCCCCAAGGCTCTTGCCCGAGGAAACTTC | + |
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Preference number: 6 (lower is better) Translates to: ISITTSCTGFSSLLG*RQSVTPKALARGNF Trigger: GAAGTTTCCTCGGGCAAGAGCCTTGGGGGTCACCGACTGTCTCAACCCTAACAAGCTGGAGAAGCCTGTGCAGGAGGTTGTGATGGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CAA 72 bp | ATTTCCATCACAACCTCCTGCACAGGCTTCTCCAGCTaGTTAGGGTTGAGACAGTCGGTGACCCCCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ISITTSCTGFSS*LGLRQSVTPKA Trigger: AGCCTTGGGGGTCACCGACTGTCTCAACCCTAACAAGCTGGAGAAGCCTGTGCAGGAGGTTGTGATGGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS GCA 72 bp | TCAACACCGACACCCGTCATTTCCATCACAACCTCCTaGACAGGCTTCTCCAGCTTGTTAGGGTTGAGACAG | + |
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Preference number: 6 (lower is better) Translates to: STPTPVISITTS*TGFSSLLGLRQ Trigger: CTGTCTCAACCCTAACAAGCTGGAGAAGCCTGTGCAGGAGGTTGTGATGGAAATGACGGGTGTCGGTGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CAA 72 bp | ACCCCCAAGGCTCTTGCCCGAGGAAACTTCTCCTCATaGATGTCAACCCCGATGATTCTAGATGCACCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TPKALARGNFSS*MSTPMILDAPE Trigger: CTCTGGTGCATCTAGAATCATCGGGGTTGACATCAATGAGGAGAAGTTTCCTCGGGCAAGAGCCTTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CAA 72 bp | CCCGTCGAGCATCACCCCAGAACAAGGCAGAACATCTaGCTTGTAGCAGAAATTTCCTTTGGGGTGCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: PVEHHPRTRQNI*LVAEISFGVQA Trigger: TGCTTGCACCCCAAAGGAAATTTCTGCTACAAGCAAGATGTTCTGCCTTGTTCTGGGGTGATGCTCGACGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS TCA 72 bp | TTACCGCGGCGATCTCGGGCACCACAGTGTACTCTGTaGATGAGCTTGTTCGGAACGAGTGATAAATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPRRSRAPQCTL*MSLFGTSDKSS Trigger: AGAAGATTTATCACTCGTTCCGAACAAGCTCATTCACAGAGTACACTGTGGTGCCCGAGATCGCCGCGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CCA 72 bp | GACACACGCCCTTCAGGGTTTTCCCAGACAAAATCTTaGGTGCTTCAAGGGATAACTGTGCATCTGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: DTRPSGFSQTKS*VLQGITVHLME Trigger: CTCCATCAGATGCACAGTTATCCCTTGAAGCACCCAAGATTTTGTCTGGGAAAACCCTGAAGGGCGTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CCA 72 bp | CATAGCTGTTGTTGCAGGAGTTCCAAGCAGCAACCATaGTATCAACCAGTCCAATGGCCTCAAAGGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: HSCCCRSSKQQP*YQPVQWPQRQS Trigger: ACTTTGCCTTTGAGGCCATTGGACTGGTTGATACCATGGTTGCTGCTTGGAACTCCTGCAACAACAGCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CAA 72 bp | AGACACACGCCCTTCAGGGTTTTCCCAGACAAAATCTaGGGTGCTTCAAGGGATAACTGTGCATCTGATGGA | + |
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Preference number: 6 (lower is better) Translates to: RHTPFRVFPDKI*GASRDNCASDG Trigger: TCCATCAGATGCACAGTTATCCCTTGAAGCACCCAAGATTTTGTCTGGGAAAACCCTGAAGGGCGTGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS TCA 72 bp | AAAGGAAAGTTCACCACGAGTTCTCCTTTCAGCACGTaGTCATCAGAACCACAGATCCCTGACGAGATCATC | + |
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Preference number: 6 (lower is better) Translates to: KGKFTTSSPFST*SSEPQIPDEII Trigger: GATGATCTCGTCAGGGATCTGTGGTTCTGATGATCACGTGCTGAAAGGAGAACTCGTGGTGAACTTTCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CCA 72 bp | GGAGATAATCAGTCACTATTTGGGGTATGCAGTCTCTaGTTTTATAATCTCCCAGACACACGCCCTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GDNQSLFGVCSL*FYNLPDTRPSG Trigger: CCCTGAAGGGCGTGTGTCTGGGAGATTATAAAACCAGAGACTGCATACCCCAAATAGTGACTGATTATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS TCA 72 bp | CAGAAGAGCAGAACACAACGGATGGCTTTTCCTGAATaGAACAGCTCCAAGGCTTCATGGAGCTGGTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: QKSRTQRMAFPE*NSSKASWSWLK Trigger: TTTTAACCAGCTCCATGAAGCCTTGGAGCTGTTTCATTCAGGAAAAGCCATCCGTTGTGTTCTGCTCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106247.2 |
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| CDS CCA 72 bp | TTTGGGGTGCAAGCAGGCGTCACATTCTCTACACTGTaGAATAATGAGGATGAGGACTTTATCTCCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: FGVQAGVTFSTL*NNEDEDFISWF Trigger: AAACCAGGAGATAAAGTCCTCATCCTCATTATTCCACAGTGTAGAGAATGTGACGCCTGCTTGCACCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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| CDS CCA 72 bp | ACACTGTGGAATAATGAGGATGAGGACTTTATCTCCTaGTTTCATGGAGCAAACTCCATCACCAACACTCTC | + |
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Preference number: 6 (lower is better) Translates to: TLWNNEDEDFIS*FHGANSITNTL Trigger: GAGAGTGTTGGTGATGGAGTTTGCTCCATGAAACCAGGAGATAAAGTCCTCATCCTCATTATTCCACAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013455.13 ENSMUST00000106247.2 |
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