RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADH5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028138

Ensembl transcript IDs: ENSMUST00000005964.7, ENSMUST00000160201.2, ENSMUST00000198126.2

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGAGAAAGAAAGAATATTCTGATTTCGGCTATTCTAAACCCATGTaGATGAATTCAAGATCAGCCTTCATTTTTGGGTTAGCACTGTTT +
Preference number: 1 (lower is better)
Translates to: LRKKEYSDFGYSKPM*MNSRSAFIFGLALF
Trigger: AAACAGTGCTAACCCAAAAATGAAGGCTGATCTTGAATTCATCCACATGGGTTTAGAATAGCCGAAATCAGAATATTCTTTCTTTCTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
3UTR-3UTR TCA 90 bp GACCTTCACGTTGCCAATGCACTCAAAGGAGTAATCCACGCCCCCATCTGTCATATCCCTTCCCCTGAGTaGCCCTTATTTTCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: DLHVANALKGVIHAPICHIPSPE*PLFSGK
Trigger: TTTGCCAGAAAATAAGGGTCACTCAGGGGAAGGGAT...ATGACAGATGGGGGCGTGGATTACTCCTTTGAGTGCATTGGCAACGTGAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000198126.2
3UTR-3UTR TCA 90 bp GACCTTCACGTTGCCAATGCACTCAAAGGAGTAATCCACGCCCCCATCTGTCATCTAGTCCCCATGAAGTaGAAAACAGACTTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: DLHVANALKGVIHAPICHLVPMK*KTDFPL
Trigger: CAAAGGAAAGTCTGTTTTTCACTTCATGGGGACTAG...ATGACAGATGGGGGCGTGGATTACTCCTTTGAGTGCATTGGCAACGTGAAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000198126.2
3UTR-3UTR CCA 90 bp GACCTTCACGTTGCCAATGCACTCAAAGGAGTAATCCACGCCCCCATCTGTCATTCAACGAGGACTTCCTaGATGGATTTACTGAAGTCT +
Preference number: 2 (lower is better)
Translates to: DLHVANALKGVIHAPICHSTRTS*MDLLKS
Trigger: AGACTTCAGTAAATCCATCCAGGAAGTCCTCGTTGA...ATGACAGATGGGGGCGTGGATTACTCCTTTGAGTGCATTGGCAACGTGAAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000198126.2
3UTR-3UTR CCA 90 bp ACTCAAAGGAGTAATCCACGCCCCCATCTGTCATCTCAACGAGGACTTCCTGGAGTGACCCTTATTTTCTaGCAAAGGTTTGTTTTAGGA +
Preference number: 2 (lower is better)
Translates to: TQRSNPRPHLSSQRGLPGVTLIF*QRFVLG
Trigger: TCCTAAAACAAACCTTTGCCAGAAAATAAGGGTCAC...TCCAGGAAGTCCTCGTTGAGATGACAGATGGGGGCGTGGATTACTCCTTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000198126.2
3UTR-3UTR GCA 90 bp ACACAGTTGACTGTCAATGAACTGGGATCCTACAAGATGACAAGATGTTCAACTAATCACAGGAAAGAGTaGAGGATGGACAGTGTTCTC +
Preference number: 2 (lower is better)
Translates to: TQLTVNELGSYKMTRCSTNHRKE*RMDSVL
Trigger: GAGAACACTGTCCATCCTGCACTCTTTCCTGTGATT...AGTTGAACATCTTGTCATCTTGTAGGATCCCAGTTCATTGACAGTCAACTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
3UTR-3UTR CCA 90 bp ACACAGTTGACTGTCAATGAACTGGGATCCTACAAGATGACAAGATGTTCAACTGGAAAGAGTGCAGGATaGACAGTGTTCTCTTCAGAA +
Preference number: 2 (lower is better)
Translates to: TQLTVNELGSYKMTRCSTGKSAG*TVFSSE
Trigger: TTCTGAAGAGAACACTGTCCATCCTGCACTCTTTCC...AGTTGAACATCTTGTCATCTTGTAGGATCCCAGTTCATTGACAGTCAACTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
3UTR-3UTR GCA 90 bp TCTGATTTCGGCTATTCTAAACCCATGTGGATGAATTCAAGATCAGCCTTCATTTTACAGTCTCGATTATaGACATTCCTTCTAGTCATT +
Preference number: 2 (lower is better)
Translates to: SDFGYSKPMWMNSRSAFILQSRL*TFLLVI
Trigger: AATGACTAGAAGGAATGTGCATAATCGAGACTGTAA...AATGAAGGCTGATCTTGAATTCATCCACATGGGTTTAGAATAGCCGAAATCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
3UTR-3UTR CAA 90 bp ACTCAAAGGAGTAATCCACGCCCCCATCTGTCATCTCAACGAGGACTTCCTGGACAGCCCCGTAGCCAGTaGAAATACCACAGCCGAGAA +
Preference number: 3 (lower is better)
Translates to: TQRSNPRPHLSSQRGLPGQPRSQ*KYHSRE
Trigger: TTCTCGGCTGTGGTATTTCAACTGGCTACGGGGCTG...TCCAGGAAGTCCTCGTTGAGATGACAGATGGGGGCGTGGATTACTCCTTTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000198126.2
3UTR CCA 72 bp TCCACGCCCCCATCTGTCATCTCAACGAGGACTTCCTaGATGGATTTACTGAAGTCTTGGGGGCTAATACAT +
Preference number: 3 (lower is better)
Translates to: STPPSVISTRTS*MDLLKSWGLIH
Trigger: ATGTATTAGCCCCCAAGACTTCAGTAAATCCATCCAGGAAGTCCTCGTTGAGATGACAGATGGGGGCGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000198126.2
3UTR TCA 72 bp GGGTTAGCACTGTTTCTAGACACAGTTGACTGTCAATaGACTGGGATCCTACAAGATGACAAGATGTTCAAC +
Preference number: 3 (lower is better)
Translates to: GLALFLDTVDCQ*TGILQDDKMFN
Trigger: GTTGAACATCTTGTCATCTTGTAGGATCCCAGTTCATTGACAGTCAACTGTGTCTAGAAACAGTGCTAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
3UTR TCA 72 bp GAGCAGCAATTGTTTATGTGGAATTTGCCTAGTTCATaGTTACAGTCTCGATTATGCACATTCCTTCTAGTC +
Preference number: 3 (lower is better)
Translates to: EQQLFMWNLPSS*LQSRLCTFLLV
Trigger: GACTAGAAGGAATGTGCATAATCGAGACTGTAATCATGAACTAGGCAAATTCCACATAAACAATTGCTGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
3UTR GCA 72 bp TGTTGCACAATGAGCAGCAATTGTTTATGTGGAATTTaGCTAGTTCATGATTACAGTCTCGATTATGCACAT +
Preference number: 3 (lower is better)
Translates to: CCTMSSNCLCGI*LVHDYSLDYAH
Trigger: ATGTGCATAATCGAGACTGTAATCATGAACTAGGCAAATTCCACATAAACAATTGCTGCTCATTGTGCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
3UTR CCA 72 bp AAAGAATATTCTGATTTCGGCTATTCTAAACCCATGTaGATGAATTCAAGATCAGCCTTCATTTTTGGGTTA +
Preference number: 3 (lower is better)
Translates to: KEYSDFGYSKPM*MNSRSAFIFGL
Trigger: TAACCCAAAAATGAAGGCTGATCTTGAATTCATCCACATGGGTTTAGAATAGCCGAAATCAGAATATTCTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR GCA 90 bp CGCGCTCCAAATCTGATCCTGCAACCCGGGCGCGACCCGGGCAAGTTCTTCCGTAGCAGAAAGCAGAGCTaGTCTCCAAGCGCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RAPNLILQPGRDPGKFFRSRKQS*SPSAAP
Trigger: CGGCGCCGCGCTTGGAGAGCAGCTCTGCTTTCTGCT...ACGGAAGAACTTGCCCGGGTCGCGCCCGGGTTGCAGGATCAGATTTGGAGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160201.2
CDS-3UTR GCA 90 bp AAATCTGATCCTGCAACCCGGGCGCGACCCGGGCAAGTTCTTCCGTCCCGCGTGGAAACAAAGCCTCCATaGCCTCGCTGCGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KSDPATRARPGQVLPSRVETKPP*PRCGCA
Trigger: AGCGCAGCCGCAGCGAGGGCATGGAGGCTTTGTTTC...CACGCGGGACGGAAGAACTTGCCCGGGTCGCGCCCGGGTTGCAGGATCAGATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160201.2
CDS-3UTR GCA 90 bp GACCTTCACGTTGCCAATGCACTCAAAGGAGTAATCCACGCCCCCATCTGTCATCGCCTCCCAGGCGACTaGAGCCTTACACCTGATCAC +
Preference number: 4 (lower is better)
Translates to: DLHVANALKGVIHAPICHRLPGD*SLTPDH
Trigger: GTGATCAGGTGTAAGGCTGCAGTCGCCTGGGAGGCG...ATGACAGATGGGGGCGTGGATTACTCCTTTGAGTGCATTGGCAACGTGAAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000198126.2
CDS-3UTR TCA 90 bp ACTCAAAGGAGTAATCCACGCCCCCATCTGTCATCTCAACGAGGACTTCCTGGATTAATCCGAACTTCATaGGCCTTTGGAGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: TQRSNPRPHLSSQRGLPGLIRTS*AFGGAT
Trigger: AGTGGCCCCTCCAAAGGCTCATGAAGTTCGGATTAA...TCCAGGAAGTCCTCGTTGAGATGACAGATGGGGGCGTGGATTACTCCTTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000198126.2
CDS-3UTR TCA 90 bp CAGTTGACTGTCAATGAACTGGGATCCTACAAGATGACAAGATGTTCAACTCACCTCCCACTACCACACTaGCACCCCAGCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: QLTVNELGSYKMTRCSTHLPLPH*HPSLCG
Trigger: CCCACAAAGGCTGGGGTGTCAGTGTGGTAGTGGGAG...GTGAGTTGAACATCTTGTCATCTTGTAGGATCCCAGTTCATTGACAGTCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR CCA 90 bp ACACAGTTGACTGTCAATGAACTGGGATCCTACAAGATGACAAGATGTTCAACTACACCCCAGCCTTTGTaGGCTGCCTCAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: TQLTVNELGSYKMTRCSTTPQPL*AASRAD
Trigger: ATCAGCCCTTGAGGCAGCCCACAAAGGCTGGGGTGT...AGTTGAACATCTTGTCATCTTGTAGGATCCCAGTTCATTGACAGTCAACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR GCA 90 bp TCCTACAAGATGACAAGATGTTCAACTCACACACACATGCAGAAAGTATTTTTACGCCTCCCAGGCGACTaGAGCCTTACACCTGATCAC +
Preference number: 4 (lower is better)
Translates to: SYKMTRCSTHTHMQKVFLRLPGD*SLTPDH
Trigger: GTGATCAGGTGTAAGGCTGCAGTCGCCTGGGAGGCG...TAAAAATACTTTCTGCATGTGTGTGTGAGTTGAACATCTTGTCATCTTGTAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR TCA 90 bp TCTGATTTCGGCTATTCTAAACCCATGTGGATGAATTCAAGATCAGCCTTCATTCAAGGGCTGATCTCATaGCCTTCACGTTGCCAATGC +
Preference number: 4 (lower is better)
Translates to: SDFGYSKPMWMNSRSAFIQGLIS*PSRCQC
Trigger: GCATTGGCAACGTGAAGGTCATGAGATCAGCCCTTG...AATGAAGGCTGATCTTGAATTCATCCACATGGGTTTAGAATAGCCGAAATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR TCA 90 bp TCTGATTTCGGCTATTCTAAACCCATGTGGATGAATTCAAGATCAGCCTTCATTATCCCTTCCCCTGAGTaGCCCTTATTTTCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SDFGYSKPMWMNSRSAFIIPSPE*PLFSGK
Trigger: TTTGCCAGAAAATAAGGGTCACTCAGGGGAAGGGAT...AATGAAGGCTGATCTTGAATTCATCCACATGGGTTTAGAATAGCCGAAATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR TCA 90 bp CAGTTGACTGTCAATGAACTGGGATCCTACAAGATGACAAGATGTTCAACTCACCTAGTCCCCATGAAGTaGAAAACAGACTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QLTVNELGSYKMTRCSTHLVPMK*KTDFPL
Trigger: CAAAGGAAAGTCTGTTTTTCACTTCATGGGGACTAG...GTGAGTTGAACATCTTGTCATCTTGTAGGATCCCAGTTCATTGACAGTCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR TCA 90 bp TCCTACAAGATGACAAGATGTTCAACTCACACACACATGCAGAAAGTATTTTTATTAATCCGAACTTCATaGGCCTTTGGAGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: SYKMTRCSTHTHMQKVFLLIRTS*AFGGAT
Trigger: AGTGGCCCCTCCAAAGGCTCATGAAGTTCGGATTAA...TAAAAATACTTTCTGCATGTGTGTGTGAGTTGAACATCTTGTCATCTTGTAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR CCA 90 bp ACACAGTTGACTGTCAATGAACTGGGATCCTACAAGATGACAAGATGTTCAACTTCAACGAGGACTTCCTaGATGGATTTACTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: TQLTVNELGSYKMTRCSTSTRTS*MDLLKS
Trigger: AGACTTCAGTAAATCCATCCAGGAAGTCCTCGTTGA...AGTTGAACATCTTGTCATCTTGTAGGATCCCAGTTCATTGACAGTCAACTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR CCA 90 bp TTAGCTTGTAAATCCTGTCTGTTTCTAGCCAATCACAGGAAAGAGTGCAGGATGGTGACCCTTATTTTCTaGCAAAGGTTTGTTTTAGGA +
Preference number: 4 (lower is better)
Translates to: LACKSCLFLANHRKECRMVTLIF*QRFVLG
Trigger: TCCTAAAACAAACCTTTGCCAGAAAATAAGGGTCAC...CATCCTGCACTCTTTCCTGTGATTGGCTAGAAACAGACAGGATTTACAAGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR GCA 90 bp TCCTACAAGATGACAAGATGTTCAACTCACACACACATGCAGAAAGTATTTTTATTAGAACAGTTCGAATaGTGTCTCCCGAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: SYKMTRCSTHTHMQKVFLLEQFE*CLPSAS
Trigger: TGATGCACTCGGGAGACAGCATTCGAACTGTTCTAA...TAAAAATACTTTCTGCATGTGTGTGTGAGTTGAACATCTTGTCATCTTGTAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS GCA 90 bp CTGCTCTCCAAGCGCGGCGCCGAAACAAAGCCTCCATGCCCTCGCTaGGGCTGCGCTCGCCTTCCCCGGCGGGCGGCAGCGGGCCACCCG +
Preference number: 5 (lower is better)
Translates to: LLSKRGAETKPPCPR*GCARLPRRAAAGHP
Trigger: CGGGTGGCCCGCTGCCGCCCGCCGGGGAAGGCGAGCGCAGCCGCAGCGAGGGCATGGAGGCTTTGTTTCGGCGCCGCGCTTGGAGAGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000160201.2
CDS GCA 90 bp AAAGCAGAGCTGCTCTCCAAGCGCGGCGCCGAAACAAAGCCTCCATaGCCTCGCTGCGGCTGCGCTCGCCTTCCCCGGCGGGCGGCAGCG +
Preference number: 5 (lower is better)
Translates to: KAELLSKRGAETKPP*PRCGCARLPRRAAA
Trigger: CGCTGCCGCCCGCCGGGGAAGGCGAGCGCAGCCGCAGCGAGGGCATGGAGGCTTTGTTTCGGCGCCGCGCTTGGAGAGCAGCTCTGCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000160201.2
CDS-3UTR CAA 90 bp ATCCTACAAGATGACAAGATGTTCAACTCACACACACATGCAGAAAGTATTTTTCTGACACCCCAGCCTTaGTGGGCTGCCTCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: ILQDDKMFNSHTHAESIFLTPQP*WAASRA
Trigger: AGCCCTTGAGGCAGCCCACAAAGGCTGGGGTGTCAG...AAAAATACTTTCTGCATGTGTGTGTGAGTTGAACATCTTGTCATCTTGTAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS-3UTR CAA 90 bp ATCCTACAAGATGACAAGATGTTCAACTCACACACACATGCAGAAAGTATTTTTCAGCCCCGTAGCCAGTaGAAATACCACAGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: ILQDDKMFNSHTHAESIFQPRSQ*KYHSRE
Trigger: TTCTCGGCTGTGGTATTTCAACTGGCTACGGGGCTG...AAAAATACTTTCTGCATGTGTGTGTGAGTTGAACATCTTGTCATCTTGTAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005964.7
CDS GCA 72 bp GGCGCCGAAACAAAGCCTCCATGCCCTCGCTGCGGCTaGGCTCGCCTTCCCCGGCGGGCGGCAGCGGGCCAC +
Preference number: 6 (lower is better)
Translates to: GAETKPPCPRCG*ARLPRRAAAGH
Trigger: GTGGCCCGCTGCCGCCCGCCGGGGAAGGCGAGCGCAGCCGCAGCGAGGGCATGGAGGCTTTGTTTCGGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000160201.2
CDS GCA 72 bp AAGCGCGGCGCCGAAACAAAGCCTCCATGCCCTCGCTaGGGCTGCGCTCGCCTTCCCCGGCGGGCGGCAGCG +
Preference number: 6 (lower is better)
Translates to: KRGAETKPPCPR*GCARLPRRAAA
Trigger: CGCTGCCGCCCGCCGGGGAAGGCGAGCGCAGCCGCAGCGAGGGCATGGAGGCTTTGTTTCGGCGCCGCGCTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000160201.2
CDS GCA 72 bp CACCGGGCTCCGGCGGAGCAGAGCAGAAAGCAGAGCTaGTCTCCAAGCGCGGCGCCGAAACAAAGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: HRAPAEQSRKQS*SPSAAPKQSLH
Trigger: ATGGAGGCTTTGTTTCGGCGCCGCGCTTGGAGAGCAGCTCTGCTTTCTGCTCTGCTCCGCCGGAGCCCGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160201.2