Pregenerated sensors for ADH4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037797Ensembl transcript IDs: ENSMUST00000013458.9, ENSMUST00000161312.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCTGATACAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTaGGGTAATAAATCATCCAGACAGGCTCGGATCCAATCAGATAAC | + |
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Preference number: 1 (lower is better) Translates to: VLIQSVNAGFLWLIM*GNKSSRQARIQSDN Trigger: GTTATCTGATTGGATCCGAGCCTGTCTGGATGATTTATTACCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTGTATCAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| 3UTR TCA 72 bp | CAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTaGGGTAATAAATCATCCAGACAGGCTCGGATCCAA | + |
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Preference number: 3 (lower is better) Translates to: QSVNAGFLWLIM*GNKSSRQARIQ Trigger: TTGGATCCGAGCCTGTCTGGATGATTTATTACCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR TCA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCCTTTGTCACCTGGTTTaGAGTTGGTCACTCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: NHPDRLGSNQITFQVAPGLCHLV*SWSLPA Trigger: GGCCGGGAGTGACCAACTTCAAACCAGGTGACAAAG...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | CATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCATTTTGCTCCGACCACAGTaGACGACCCCCAGCCTAATA | + |
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Preference number: 4 (lower is better) Translates to: HPDRLGSNQITFQVAPGILLRPQ*TTPSLI Trigger: TATTAGGCTGGGGGTCGTGCACTGTGGTCGGAGCAA...AATGCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CCA 90 bp | CATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCATTTGGCTCCCAGGGCCTTaGCTTTTGGGAACTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: HPDRLGSNQITFQVAPGIWLPGP*LLGTSH Trigger: GTGAGAAGTTCCCAAAAGCCAAGGCCCTGGGAGCCA...AATGCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR TCA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCTTCCACAGAGGTTTGTaGGAGGGCTCAGACAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: NHPDRLGSNQITFQVAPGFHRGL*EGSDRA Trigger: AGCTCTGTCTGAGCCCTCTCACAAACCTCTGTGGAA...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR TCA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCGCTGCTTTCAAGGTCTaGGCTGTTCCTGCACAGTCA | + |
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Preference number: 4 (lower is better) Translates to: NHPDRLGSNQITFQVAPGAAFKV*AVPAQS Trigger: TGACTGTGCAGGAACAGCTCAGACCTTGAAAGCAGC...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CCA 90 bp | CATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCATTGTTTGTCTAGCTCCCTaGGATTCAGGCAGTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPDRLGSNQITFQVAPGIVCLAP*DSGSQW Trigger: CCACTGACTGCCTGAATCCCAGGGAGCTAGACAAAC...AATGCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCCACTCTCTCCAAGTTTaGCTCATCATCGACTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: NHPDRLGSNQITFQVAPGHSLQV*LIIDSG Trigger: GCCAGAGTCGATGATGAGGCAAACTTGGAGAGAGTG...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCAGTGCAGTCCACAGCTaGTTTCAAGGTCTGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NHPDRLGSNQITFQVAPGSAVHS*FQGLSC Trigger: ACAGCTCAGACCTTGAAAGCAGCTGTGGACTGCACT...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | CATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCATTCCCAGCCTAATACAGTaGAGTCCACAGCTGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: HPDRLGSNQITFQVAPGIPSLIQ*SPQLLS Trigger: TGAAAGCAGCTGTGGACTGCACTGTATTAGGCTGGG...AATGCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR TCA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCGGCAAGATTGGCCTCTaGAACCACAGTGTATTGAGA | + |
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Preference number: 4 (lower is better) Translates to: NHPDRLGSNQITFQVAPGGKIGL*NHSVLR Trigger: TCTCAATACACTGTGGTTTCAGAGGCCAATCTTGCC...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | CATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCATTAGAGCTTGCACCTTTTaGACTGTGGTGCAAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: HPDRLGSNQITFQVAPGIRACTF*TVVQRM Trigger: CATTCTTTGCACCACAGTGCAAAAGGTGCAAGCTCT...AATGCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCCCTCAATTTCTTCAATaGAAAGGGGACTGCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: NHPDRLGSNQITFQVAPGPQFLQ*KGDCQF Trigger: AAACTGGCAGTCCCCTTTGCATTGAAGAAATTGAGG...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CCA 90 bp | CATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCATTGTCAGAAACCAGGTTTaGGACAGAGTCTACACTTTT | + |
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Preference number: 4 (lower is better) Translates to: HPDRLGSNQITFQVAPGIVRNQV*DRVYTF Trigger: AAAAGTGTAGACTCTGTCCCAAACCTGGTTTCTGAC...AATGCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CCA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCCCTTCATCAGGTCAATaGCATCATTTATGCTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: NHPDRLGSNQITFQVAPGPSSGQ*HHLCSR Trigger: TCGAGAGCATAAATGATGCCATTGACCTGATGAAGG...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | CATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCATTCCTTTTGCACTGTGGTaGAAAGAATGGGATTACTTT | + |
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Preference number: 4 (lower is better) Translates to: HPDRLGSNQITFQVAPGIPFALW*KEWDYF Trigger: AAAGTAATCCCATTCTTTGCACCACAGTGCAAAAGG...AATGCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | CATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCATTTCAGGATTGTTCGGATaGTTTTTCCTTCCTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: HPDRLGSNQITFQVAPGISGLFG*FFLPSS Trigger: TGATGAAGGAAGGAAAAAGCATCCGAACAATCCTGA...AATGCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCTTTCCAGGCAATGGCTaGCTTGCATTTAATAACTTT | + |
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Preference number: 4 (lower is better) Translates to: NHPDRLGSNQITFQVAPGFPGNG*LAFNNF Trigger: AAAGTTATTAAATGCAAGGCAGCCATTGCCTGGAAA...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | ATTTGTGCTGATACAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTGAGGCATTTTGTCAACCTTTaGTCCGACCACAGTGCACGA | + |
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Preference number: 4 (lower is better) Translates to: ICADTKCKCRLSLAHHVRHFVNL*SDHSAR Trigger: TCGTGCACTGTGGTCGGAGCAAAGGTTGACAAAATG...CCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTGTATCAGCACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CCA 90 bp | ATTTGTGCTGATACAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTGAGGCCTCATCATCGACTCTaGCAAGATTGGCCTCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: ICADTKCKCRLSLAHHVRPHHRL*QDWPLK Trigger: TTTCAGAGGCCAATCTTGCCAGAGTCGATGATGAGG...CCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTGTATCAGCACAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CCA 90 bp | ATTTGTGCTGATACAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTGAGGCTGTGGTGCAAAGAATaGGATTACTTTGTCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: ICADTKCKCRLSLAHHVRLWCKE*DYFVTW Trigger: CCAGGTGACAAAGTAATCCCATTCTTTGCACCACAG...CCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTGTATCAGCACAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR GCA 90 bp | ATTTGTGCTGATACAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTGAGGACTTTCTACAATTCCTaGACACTCATGACCAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: ICADTKCKCRLSLAHHVRTFYNS*TLMTKD Trigger: GTCCTTGGTCATGAGTGTGCAGGAATTGTAGAAAGT...CCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTGTATCAGCACAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CCA 90 bp | ATTTGTGCTGATACAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTGAGGGATTACTTTGTCACCTaGTTTGAAGTTGGTCACTCC | + |
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Preference number: 4 (lower is better) Translates to: ICADTKCKCRLSLAHHVRDYFVT*FEVGHS Trigger: GGAGTGACCAACTTCAAACCAGGTGACAAAGTAATC...CCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTGTATCAGCACAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CCA 90 bp | ATTTGTGCTGATACAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTGAGGTTTTACACCCAATTATaGCAGAAAGACCTACACACC | + |
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Preference number: 4 (lower is better) Translates to: ICADTKCKCRLSLAHHVRFYTQL*QKDLHT Trigger: GGTGTGTAGGTCTTTCTGCCATAATTGGGTGTAAAA...CCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTGTATCAGCACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CAA 90 bp | CATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCATTTCACCTGGTTTGAAGTaGGTCACTCCCGGCCCAACA | + |
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Preference number: 5 (lower is better) Translates to: HPDRLGSNQITFQVAPGISPGLK*VTPGPT Trigger: TGTTGGGCCGGGAGTGACCAACTTCAAACCAGGTGA...AATGCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CAA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCACTTTGTCACCTGGTTaGAAGTTGGTCACTCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: NHPDRLGSNQITFQVAPGTLSPG*KLVTPG Trigger: GCCGGGAGTGACCAACTTCAAACCAGGTGACAAAGT...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CAA 90 bp | AATCATCCAGACAGGCTCGGATCCAATCAGATAACATTCCAAGTTGCTCCTGGCACACTCTCTCCAAGTTaGCCTCATCATCGACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: NHPDRLGSNQITFQVAPGTLSPS*PHHRLW Trigger: CCAGAGTCGATGATGAGGCAAACTTGGAGAGAGTGT...GCCAGGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CCA 90 bp | GAGGTTTGTGAGAGGGCTCAGACAGAGCTTGCACCTTTTGCACTGTaGTGCAAAGAATGGGATTACTTTGTCACCTGGTTTGAAGTTGGT | + |
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Preference number: 5 (lower is better) Translates to: EVCERAQTELAPFAL*CKEWDYFVTWFEVG Trigger: ACCAACTTCAAACCAGGTGACAAAGTAATCCCATTCTTTGCACCACAGTGCAAAAGGTGCAAGCTCTGTCTGAGCCCTCTCACAAACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS-3UTR CAA 90 bp | ATTTGTGCTGATACAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTGAGGGTGGCTCCCAGGGCCTaGGCTTTTGGGAACTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: ICADTKCKCRLSLAHHVRVAPRA*AFGNFS Trigger: TGAGAAGTTCCCAAAAGCCAAGGCCCTGGGAGCCAC...CCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTGTATCAGCACAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS TCA 90 bp | CTTCCTTTGCAGGTAAACCTGCTGGTTCTGTCTTCCATGAGCTCCTaGTCAATAGTGGGGTATTTGAAGTTTCGGAGTTTTCCACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LPLQVNLLVLSSMSS*SIVGYLKFRSFPQR Trigger: CCTCTGTGGAAAACTCCGAAACTTCAAATACCCCACTATTGATCAGGAGCTCATGGAAGACAGAACCAGCAGGTTTACCTGCAAAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS GCA 90 bp | TTCGGATGCTTTTTCCTTCCTTCATCAGGTCAATGGCATCATTTATaGTCTCGAAAGGTAGGGCATGGGTCACCAGTAAGTCCAGATCGA | + |
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Preference number: 5 (lower is better) Translates to: FGCFFLPSSGQWHHL*SRKVGHGSPVSPDR Trigger: TCGATCTGGACTTACTGGTGACCCATGCCCTACCTTTCGAGAGCATAAATGATGCCATTGACCTGATGAAGGAAGGAAAAAGCATCCGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CCA 90 bp | AGGTCAGGATTGTTCGGATGCTTTTTCCTTCCTTCATCAGGTCAATaGCATCATTTATGCTCTCGAAAGGTAGGGCATGGGTCACCAGTA | + |
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Preference number: 5 (lower is better) Translates to: RSGLFGCFFLPSSGQ*HHLCSRKVGHGSPV Trigger: TACTGGTGACCCATGCCCTACCTTTCGAGAGCATAAATGATGCCATTGACCTGATGAAGGAAGGAAAAAGCATCCGAACAATCCTGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CAA 90 bp | ATTTGTGCTGATACAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTGAGGAGTCAGAAACCAGGTTaGGGACAGAGTCTACACTTT | + |
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Preference number: 5 (lower is better) Translates to: ICADTKCKCRLSLAHHVRSQKPG*GQSLHF Trigger: AAAGTGTAGACTCTGTCCCAAACCTGGTTTCTGACT...CCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTGTATCAGCACAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS-3UTR CAA 90 bp | ATTTGTGCTGATACAAAGTGTAAATGCAGGCTTTCTTTGGCTCATCATGTGAGGTCAATAGTGGGGTATTaGAAGTTTCGGAGTTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: ICADTKCKCRLSLAHHVRSIVGY*KFRSFP Trigger: TGGAAAACTCCGAAACTTCAAATACCCCACTATTGA...CCTCACATGATGAGCCAAAGAAAGCCTGCATTTACACTTTGTATCAGCACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CAA 90 bp | TCCACACCTCCAGCTGTCAGCTCAGTGATGACATCCTGGACAGGTTaGTCTAGCTCCCTGGGATTCAGGCAGTCAGTGGCTCCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: STPPAVSSVMTSWTG*SSSLGFRQSVAPRA Trigger: GGCCCTGGGAGCCACTGACTGCCTGAATCCCAGGGAGCTAGACAAACCTGTCCAGGATGTCATCACTGAGCTGACAGCTGGAGGTGTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS GCA 72 bp | CTCCGACCACAGTGCACGACCCCCAGCCTAATACAGTaGAGTCCACAGCTGCTTTCAAGGTCTGAGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LRPQCTTPSLIQ*SPQLLSRSELF Trigger: GAACAGCTCAGACCTTGAAAGCAGCTGTGGACTGCACTGTATTAGGCTGGGGGTCGTGCACTGTGGTCGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CCA 72 bp | TCCACACCTCCAGCTGTCAGCTCAGTGATGACATCCTaGACAGGTTTGTCTAGCTCCCTGGGATTCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: STPPAVSSVMTS*TGLSSSLGFRQ Trigger: CTGCCTGAATCCCAGGGAGCTAGACAAACCTGTCCAGGATGTCATCACTGAGCTGACAGCTGGAGGTGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CAA 72 bp | CCAGCTGTCAGCTCAGTGATGACATCCTGGACAGGTTaGTCTAGCTCCCTGGGATTCAGGCAGTCAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PAVSSVMTSWTG*SSSLGFRQSVA Trigger: AGCCACTGACTGCCTGAATCCCAGGGAGCTAGACAAACCTGTCCAGGATGTCATCACTGAGCTGACAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS GCA 72 bp | GCAGTCCACAGCTGCTTTCAAGGTCTGAGCTGTTCCTaGACAGTCAAGGGAGTAATCCACACCTCCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AVHSCFQGLSCS*TVKGVIHTSSC Trigger: ACAGCTGGAGGTGTGGATTACTCCCTTGACTGTGCAGGAACAGCTCAGACCTTGAAAGCAGCTGTGGACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CAA 90 bp | TTGTCTAGCTCCCTGGGATTCAGGCAGTCAGTGGCTCCCAGGGCCTaGGCTTTTGGGAACTTCTCACCGTTGATGTCAATAGCTATGATT | + |
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Preference number: 6 (lower is better) Translates to: LSSSLGFRQSVAPRA*AFGNFSPLMSIAMI Trigger: AATCATAGCTATTGACATCAACGGTGAGAAGTTCCCAAAAGCCAAGGCCCTGGGAGCCACTGACTGCCTGAATCCCAGGGAGCTAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CAA 90 bp | AGCCTGATGAGAACCCACATCCAATCAGACACACTCTCTCCAAGTTaGCCTCATCATCGACTCTGGCAAGATTGGCCTCTGAAACCACAG | + |
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Preference number: 6 (lower is better) Translates to: SLMRTHIQSDTLSPS*PHHRLWQDWPLKPQ Trigger: CTGTGGTTTCAGAGGCCAATCTTGCCAGAGTCGATGATGAGGCAAACTTGGAGAGAGTGTGTCTGATTGGATGTGGGTTCTCATCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS CAA 72 bp | CACCTTTTGCACTGTGGTGCAAAGAATGGGATTACTTaGTCACCTGGTTTGAAGTTGGTCACTCCCGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: HLLHCGAKNGIT*SPGLKLVTPGP Trigger: TGGGCCGGGAGTGACCAACTTCAAACCAGGTGACAAAGTAATCCCATTCTTTGCACCACAGTGCAAAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS CAA 90 bp | CAGAGCTTGCACCTTTTGCACTGTGGTGCAAAGAATGGGATTACTTaGTCACCTGGTTTGAAGTTGGTCACTCCCGGCCCAACACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: QSLHLLHCGAKNGIT*SPGLKLVTPGPTLS Trigger: AGAAAGTGTTGGGCCGGGAGTGACCAACTTCAAACCAGGTGACAAAGTAATCCCATTCTTTGCACCACAGTGCAAAAGGTGCAAGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS CCA 72 bp | GAGAGGGCTCAGACAGAGCTTGCACCTTTTGCACTGTaGTGCAAAGAATGGGATTACTTTGTCACCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: ERAQTELAPFAL*CKEWDYFVTWF Trigger: AAACCAGGTGACAAAGTAATCCCATTCTTTGCACCACAGTGCAAAAGGTGCAAGCTCTGTCTGAGCCCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS CAA 72 bp | TTTCCACAGAGGTTTGTGAGAGGGCTCAGACAGAGCTaGCACCTTTTGCACTGTGGTGCAAAGAATGGGATT | + |
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Preference number: 6 (lower is better) Translates to: FPQRFVRGLRQS*HLLHCGAKNGI Trigger: AATCCCATTCTTTGCACCACAGTGCAAAAGGTGCAAGCTCTGTCTGAGCCCTCTCACAAACCTCTGTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS CAA 90 bp | TTTCGGAGTTTTCCACAGAGGTTTGTGAGAGGGCTCAGACAGAGCTaGCACCTTTTGCACTGTGGTGCAAAGAATGGGATTACTTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: FRSFPQRFVRGLRQS*HLLHCGAKNGITLS Trigger: TGACAAAGTAATCCCATTCTTTGCACCACAGTGCAAAAGGTGCAAGCTCTGTCTGAGCCCTCTCACAAACCTCTGTGGAAAACTCCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS TCA 72 bp | AATGGCTGCCTTGCATTTAATAACCTGAAAGAGCGATaGTGGAGAGGGGTAAGGTGGAGATTTTCCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: NGCLAFNNLKER*WRGVRWRFSLG Trigger: ACCCAGGGAAAATCTCCACCTTACCCCTCTCCATCATCGCTCTTTCAGGTTATTAAATGCAAGGCAGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161312.8 |
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| CDS CAA 72 bp | AGGTTTGTGAGAGGGCTCAGACAGAGCTTGCACCTTTaGCACTGTGGTGCAAAGAATGGGATTACTTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: RFVRGLRQSLHL*HCGAKNGITLS Trigger: TGACAAAGTAATCCCATTCTTTGCACCACAGTGCAAAAGGTGCAAGCTCTGTCTGAGCCCTCTCACAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS CCA 72 bp | ACAGAGCTTGCACCTTTTGCACTGTGGTGCAAAGAATaGGATTACTTTGTCACCTGGTTTGAAGTTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: TELAPFALWCKE*DYFVTWFEVGH Trigger: GTGACCAACTTCAAACCAGGTGACAAAGTAATCCCATTCTTTGCACCACAGTGCAAAAGGTGCAAGCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS CCA 72 bp | TCTCCAAGTTTGCCTCATCATCGACTCTGGCAAGATTaGCCTCTGAAACCACAGTGTATTGAGAGAATGAAC | + |
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Preference number: 6 (lower is better) Translates to: SPSLPHHRLWQD*PLKPQCIERMN Trigger: GTTCATTCTCTCAATACACTGTGGTTTCAGAGGCCAATCTTGCCAGAGTCGATGATGAGGCAAACTTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013458.9 ENSMUST00000161312.8 |
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| CDS CCA 72 bp | TTGTTCGGATGCTTTTTCCTTCCTTCATCAGGTCAATaGCATCATTTATGCTCTCGAAAGGTAGGGCATGGG | + |
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Preference number: 6 (lower is better) Translates to: LFGCFFLPSSGQ*HHLCSRKVGHG Trigger: CCCATGCCCTACCTTTCGAGAGCATAAATGATGCCATTGACCTGATGAAGGAAGGAAAAAGCATCCGAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS GCA 72 bp | TTTTTCCTTCCTTCATCAGGTCAATGGCATCATTTATaGTCTCGAAAGGTAGGGCATGGGTCACCAGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: FFLPSSGQWHHL*SRKVGHGSPVS Trigger: ACTTACTGGTGACCCATGCCCTACCTTTCGAGAGCATAAATGATGCCATTGACCTGATGAAGGAAGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CCA 72 bp | TCAATGGCATCATTTATGCTCTCGAAAGGTAGGGCATaGGTCACCAGTAAGTCCAGATCGAATTTCTTATTC | + |
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Preference number: 6 (lower is better) Translates to: SMASFMLSKGRA*VTSKSRSNFLF Trigger: GAATAAGAAATTCGATCTGGACTTACTGGTGACCCATGCCCTACCTTTCGAGAGCATAAATGATGCCATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CAA 90 bp | GTAAGTCCAGATCGAATTTCTTATTCTTGTAGTCAGAAACCAGGTTaGGGACAGAGTCTACACTTTTCCAACCACCAAAGAATGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: VSPDRISYSCSQKPG*GQSLHFSNHQRMFH Trigger: ATGGAACATTCTTTGGTGGTTGGAAAAGTGTAGACTCTGTCCCAAACCTGGTTTCTGACTACAAGAATAAGAAATTCGATCTGGACTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CAA 72 bp | GATCGAATTTCTTATTCTTGTAGTCAGAAACCAGGTTaGGGACAGAGTCTACACTTTTCCAACCACCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: DRISYSCSQKPG*GQSLHFSNHQR Trigger: TCTTTGGTGGTTGGAAAAGTGTAGACTCTGTCCCAAACCTGGTTTCTGACTACAAGAATAAGAAATTCGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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| CDS CCA 72 bp | ATCGAATTTCTTATTCTTGTAGTCAGAAACCAGGTTTaGGACAGAGTCTACACTTTTCCAACCACCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: IEFLILVVRNQV*DRVYTFPTTKE Trigger: TTCTTTGGTGGTTGGAAAAGTGTAGACTCTGTCCCAAACCTGGTTTCTGACTACAAGAATAAGAAATTCGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013458.9 |
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