Pregenerated sensors for ADH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074207Ensembl transcript IDs: ENSMUST00000004232.10, ENSMUST00000159159.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGTGCGTCCCAGCAGCAGCAACATGGGGTTCATGGAGAGGTTCTaGGCATTGGGAGGCACTCCTACGACGACGCTTACACCACATGCT | + |
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Preference number: 1 (lower is better) Translates to: QVRPSSSNMGFMERF*ALGGTPTTTLTPHA Trigger: AGCATGTGGTGTAAGCGTCGTCGTAGGAGTGCCTCCCAATGCCCAGAACCTCTCCATGAACCCCATGTTGCTGCTGCTGGGACGCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR GCA 90 bp | TGTGGCTGGTGCTTGAATCAGTCTGGTTTAGGGTTCAGAAACTGGTaGGTGGGAAGGCATCCACATGATCTCAGAAAGTCAGGACGGTAC | + |
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Preference number: 1 (lower is better) Translates to: CGWCLNQSGLGFRNW*VGRHPHDLRKSGRY Trigger: GTACCGTCCTGACTTTCTGAGATCATGTGGATGCCTTCCCACGCACCAGTTTCTGAACCCTAAACCAGACTGATTCAAGCACCAGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR CCA 90 bp | CCACATGCTGCATGGCAGCTCAGCAGGGCAGAAGTCATGGTGTCAAGGCGGCCGCCGTCGGTCATCTCCTaGAGAACTTCCTGGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: PHAAWQLSRAEVMVSRRPPSVIS*RTSWMG Trigger: ACCCATCCAGGAAGTTCTCCAGGAGATGACCGACGG...CGGCCGCCTTGACACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR GCA 90 bp | TTACACCACATGCTGCATGGCAGCTCAGCAGGGCAGAAGTCATGGTGTCAAGGCAGGAGAACCTGCTGGTaGCTTCGCGCAAAGTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: LHHMLHGSSAGQKSWCQGRRTCW*LRAKSP Trigger: GGGGGACTTTGCGCGAAGGCACCAGCAGGTTCTCCT...GCCTTGACACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGGTGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR GCA 90 bp | TACACCACATGCTGCATGGCAGCTCAGCAGGGCAGAAGTCATGGTGTCAAGGCGGGGTTCAGAAACTGGTaGGTGGGAAGGCATCCACAT | + |
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Preference number: 2 (lower is better) Translates to: YTTCCMAAQQGRSHGVKAGFRNW*VGRHPH Trigger: ATGTGGATGCCTTCCCACGCACCAGTTTCTGAACCC...CGCCTTGACACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR CCA 90 bp | CCACATGCTGCATGGCAGCTCAGCAGGGCAGAAGTCATGGTGTCAAGGCGGCCGATTAAGGCTGTGATGTaGCTGGTGCTTGAATCAGTC | + |
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Preference number: 2 (lower is better) Translates to: PHAAWQLSRAEVMVSRRPIKAVM*LVLESV Trigger: GACTGATTCAAGCACCAGCCACATCACAGCCTTAAT...CGGCCGCCTTGACACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR GCA 90 bp | CCACATGATCTCAGAAAGTCAGGACGGTACGGATGCTCTTTCCAGAACGAAGCAGCTTACACCACATGCTaGATGGCAGCTCAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PHDLRKSGRYGCSFQNEAAYTTC*MAAQQG Trigger: GCCCTGCTGAGCTGCCATGCAGCATGTGGTGTAAGC...TGCTTCGTTCTGGAAAGAGCATCCGTACCGTCCTGACTTTCTGAGATCATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR CCA 90 bp | CCACATGATCTCAGAAAGTCAGGACGGTACGGATGCTCTTTCCAGAACGAAGCAACACCACATGCTGCATaGCAGCTCAGCAGGGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PHDLRKSGRYGCSFQNEATPHAA*QLSRAE Trigger: TTCTGCCCTGCTGAGCTGCCATGCAGCATGTGGTGT...TGCTTCGTTCTGGAAAGAGCATCCGTACCGTCCTGACTTTCTGAGATCATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR GCA 90 bp | TACACCACATGCTGCATGGCAGCTCAGCAGGGCAGAAGTCATGGTGTCAAGGCGATCGATTTTGGCCACTaGTATATCATCTACCACGGT | + |
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Preference number: 2 (lower is better) Translates to: YTTCCMAAQQGRSHGVKAIDFGH*YIIYHG Trigger: ACCGTGGTAGATGATATAGCAGTGGCCAAAATCGAT...CGCCTTGACACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATGGGTTCAGAAACTGGTaGGTGGGAAGGCATCCACAT | + |
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Preference number: 2 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDGFRNW*VGRHPH Trigger: ATGTGGATGCCTTCCCACGCACCAGTTTCTGAACCC...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004232.10 ENSMUST00000159159.2 |
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| 3UTR TCA 72 bp | CGGCACATGTGGAGCCTGGGGTCACCTTGGCGACTTTaGCGGCAGAGCCATAGCCAGTTGAGAACCCACAGC | + |
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Preference number: 3 (lower is better) Translates to: RHMWSLGSPWRL*RQSHSQLRTHS Trigger: GCTGTGGGTTCTCAACTGGCTATGGCTCTGCCGTCAAAGTCGCCAAGGTGACCCCAGGCTCCACATGTGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR GCA 72 bp | GGGAGGCACTCCTACGACGACGCTTACACCACATGCTaGATGGCAGCTCAGCAGGGCAGAAGTCATGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: GRHSYDDAYTTC*MAAQQGRSHGV Trigger: GACACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGGTGTAAGCGTCGTCGTAGGAGTGCCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR CCA 72 bp | GGCACTCCTACGACGACGCTTACACCACATGCTGCATaGCAGCTCAGCAGGGCAGAAGTCATGGTGTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: GTPTTTLTPHAA*QLSRAEVMVSR Trigger: CCTTGACACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGGTGTAAGCGTCGTCGTAGGAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR CCA 72 bp | CCCAGCAGCAGCAACATGGGGTTCATGGAGAGGTTCTaGGCATTGGGAGGCACTCCTACGACGACGCTTACA | + |
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Preference number: 3 (lower is better) Translates to: PSSSNMGFMERF*ALGGTPTTTLT Trigger: TGTAAGCGTCGTCGTAGGAGTGCCTCCCAATGCCCAGAACCTCTCCATGAACCCCATGTTGCTGCTGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR CAA 90 bp | ACGACGCTTACACCACATGCTGCATGGCAGCTCAGCAGGGCAGAAGTCATGGTGCCGATGAGGCAGACTTaGTCCAGTGGTGAAGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: TTLTPHAAWQLSRAEVMVPMRQT*SSGEAP Trigger: TGGAGCTTCACCACTGGACAAAGTCTGCCTCATCGG...CACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGGTGTAAGCGTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR CAA 90 bp | ACGACGCTTACACCACATGCTGCATGGCAGCTCAGCAGGGCAGAAGTCATGGTGCTGGTGCTGATAAAGTaGTGGATCTGCTTTCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: TTLTPHAAWQLSRAEVMVLVLIK*WICFPL Trigger: CAAGGGAAAGCAGATCCACAACTTTATCAGCACCAG...CACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGGTGTAAGCGTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR GCA 72 bp | AGGGACAGAATCTTTACTCTTAAACCCGCCAAATATTaGTCCCTTCCAGGTGCGTCCCAGCAGCAGCAACAT | + |
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Preference number: 3 (lower is better) Translates to: RDRIFTLKPAKY*SLPGASQQQQH Trigger: ATGTTGCTGCTGCTGGGACGCACCTGGAAGGGAGCAATATTTGGCGGGTTTAAGAGTAAAGATTCTGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR CCA 72 bp | TGGTGCTTGAATCAGTCTGGTTTAGGGTTCAGAAACTaGTGCGTGGGAAGGCATCCACATGATCTCAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: WCLNQSGLGFRN*CVGRHPHDLRK Trigger: CTTTCTGAGATCATGTGGATGCCTTCCCACGCACCAGTTTCTGAACCCTAAACCAGACTGATTCAAGCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR CAA 90 bp | CCACATGATCTCAGAAAGTCAGGACGGTACGGATGCTCTTTCCAGAACGAAGCAGCAAACTTGTCCTTGTaGATGTCCACAGCAATGATC | + |
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Preference number: 3 (lower is better) Translates to: PHDLRKSGRYGCSFQNEAANLSL*MSTAMI Trigger: GATCATTGCTGTGGACATCAACAAGGACAAGTTTGC...TGCTTCGTTCTGGAAAGAGCATCCGTACCGTCCTGACTTTCTGAGATCATGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR GCA 72 bp | TGCTTGAATCAGTCTGGTTTAGGGTTCAGAAACTGGTaGGTGGGAAGGCATCCACATGATCTCAGAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: CLNQSGLGFRNW*VGRHPHDLRKS Trigger: TGACTTTCTGAGATCATGTGGATGCCTTCCCACGCACCAGTTTCTGAACCCTAAACCAGACTGATTCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR-3UTR CAA 90 bp | CCACATGATCTCAGAAAGTCAGGACGGTACGGATGCTCTTTCCAGAACGAAGCATACACAAGTACTTTATaGGCTGTGTCTCTAAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: PHDLRKSGRYGCSFQNEAYTSTL*AVSLKS Trigger: GCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTA...TGCTTCGTTCTGGAAAGAGCATCCGTACCGTCCTGACTTTCTGAGATCATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| 3UTR TCA 72 bp | ATTGGCTGTGTCTCTAAAGAGCAAAGATTAAGGCTGTaGTGTGGCTGGTGCTTGAATCAGTCTGGTTTAGGG | + |
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Preference number: 3 (lower is better) Translates to: IGCVSKEQRLRL*CGWCLNQSGLG Trigger: CCCTAAACCAGACTGATTCAAGCACCAGCCACATCACAGCCTTAATCTTTGCTCTTTAGAGACACAGCCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004232.10 ENSMUST00000159159.2 |
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| CDS-3UTR GCA 90 bp | CCACATGCTGCATGGCAGCTCAGCAGGGCAGAAGTCATGGTGTCAAGGCGGCCGGGTGCTTGCAAATCCTaGATTCTCCACACTGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PHAAWQLSRAEVMVSRRPGACKS*ILHTEG Trigger: CCCCTCAGTGTGGAGAATGCAGGATTTGCAAGCACC...CGGCCGCCTTGACACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| CDS-3UTR TCA 90 bp | ACGACGCTTACACCACATGCTGCATGGCAGCTCAGCAGGGCAGAAGTCATGGTGGGGAAAAGAGTGGAATaGCTTTATCACCGCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: TTLTPHAAWQLSRAEVMVGKRVE*LYHRSF Trigger: AAAGCTGCGGTGATAAAGTCATTCCACTCTTTTCCC...CACCATGACTTCTGCCCTGCTGAGCTGCCATGCAGCATGTGGTGTAAGCGTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| CDS-3UTR GCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATAGGAGAACCTGCTGGTaGCTTCGCGCAAAGTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDRRTCW*LRAKSP Trigger: GGGGGACTTTGCGCGAAGGCACCAGCAGGTTCTCCT...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR GCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATGCTTACACCACATGCTaGATGGCAGCTCAGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDAYTTC*MAAQQG Trigger: GCCCTGCTGAGCTGCCATGCAGCATGTGGTGTAAGC...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR TCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATGTTCCACTAACCACGTaGTCGTCTGAGCGGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDVPLTT*SSERQT Trigger: TGTCTGCCGCTCAGACGATCACGTGGTTAGTGGAAC...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR CCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATCCGTCGGTCATCTCCTaGAGAACTTCCTGGATGGGT | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDPSVIS*RTSWMG Trigger: ACCCATCCAGGAAGTTCTCCAGGAGATGACCGACGG...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR CCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATACACCACATGCTGCATaGCAGCTCAGCAGGGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDTPHAA*QLSRAE Trigger: TTCTGCCCTGCTGAGCTGCCATGCAGCATGTGGTGT...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR GCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATGGTGCTTGCAAATCCTaGATTCTCCACACTGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDGACKS*ILHTEG Trigger: CCCCTCAGTGTGGAGAATGCAGGATTTGCAAGCACC...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004232.10 ENSMUST00000159159.2 |
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| CDS-3UTR GCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATAAACCCGCCAAATATTaGTCCCTTCCAGGTGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDKPAKY*SLPGAS Trigger: GGACGCACCTGGAAGGGAGCAATATTTGGCGGGTTT...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR CCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATGAACTTCATGGGCCTTaGGGGGTGCGACTTCTATGT | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDELHGP*GVRLLC Trigger: ACATAGAAGTCGCACCCCCCAAGGCCCATGAAGTTC...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR CCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATTTCATGGAGAGGTTCTaGGCATTGGGAGGCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDFMERF*ALGGTP Trigger: AGGAGTGCCTCCCAATGCCCAGAACCTCTCCATGAA...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR CCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATCCAGCAGCAGCAACATaGGGTTCATGGAGAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDPAAAT*GSWRGS Trigger: AGAACCTCTCCATGAACCCCATGTTGCTGCTGCTGG...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR TCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATGGGAAAAGAGTGGAATaGCTTTATCACCTGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDGKRVE*LYHLVS Trigger: TGAAACCAGGTGATAAAGTCATTCCACTCTTTTCCC...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR GCA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATATCGATTTTGGCCACTaGTATATCATCTACCACGGT | + |
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Preference number: 4 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDIDFGH*YIIYHG Trigger: ACCGTGGTAGATGATATAGCAGTGGCCAAAATCGAT...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR CAA 90 bp | CCACATGATCTCAGAAAGTCAGGACGGTACGGATGCTCTTTCCAGAACGAAGCAACCGCAGCTTTGCATTaGATCACTTTTCCCGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PHDLRKSGRYGCSFQNEATAALH*ITFPAV Trigger: CACTGCGGGAAAAGTGATCAAATGCAAAGCTGCGGT...TGCTTCGTTCTGGAAAGAGCATCCGTACCGTCCTGACTTTCTGAGATCATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159159.2 |
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| CDS-3UTR CAA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATCCGATGAGGCAGACTTaGTCCAGTGGTGAAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDPMRQT*SSGEAP Trigger: TGGAGCTTCACCACTGGACAAAGTCTGCCTCATCGG...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR CAA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATACCGCAGCTTTGCATTaGATCACTTTTCCCGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDTAALH*ITFPAV Trigger: CACTGCGGGAAAAGTGATCAAATGCAAAGCTGCGGT...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004232.10 ENSMUST00000159159.2 |
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| CDS-3UTR CAA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATCTGGTGCTGATAAAGTaGTGGATCTGCTTTCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDLVLIK*WICFPL Trigger: CAAGGGAAAGCAGATCCACAACTTTATCAGCACCAG...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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| CDS-3UTR CAA 90 bp | TTGTGGAGAGCTTACACAAGTACTTTATTGGCTGTGTCTCTAAAGAGCAAAGATGCAAACTTGTCCTTGTaGATGTCCACAGCAATGATC | + |
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Preference number: 5 (lower is better) Translates to: LWRAYTSTLLAVSLKSKDANLSL*MSTAMI Trigger: GATCATTGCTGTGGACATCAACAAGGACAAGTTTGC...ATCTTTGCTCTTTAGAGACACAGCCAATAAAGTACTTGTGTAAGCTCTCCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004232.10 |
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