Pregenerated sensors for ADGRL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039167Ensembl transcript IDs: ENSMUST00000046977.12, ENSMUST00000129283.2, ENSMUST00000196970.3, ENSMUST00000238268.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACTGAGTGGAGGTCAGCTACCCTCCCTCCCCACAGGGCCCTCCTaGTCCTCGCCATCCACCACAGCCACAGGCTCTGAAGAGGAGCGT | + |
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Preference number: 1 (lower is better) Translates to: QLSGGQLPSLPTGPS*SSPSTTATGSEEER Trigger: ACGCTCCTCTTCAGAGCCTGTGGCTGTGGTGGATGGCGAGGAGCAGGAGGGCCCTGTGGGGAGGGAGGGTAGCTGACCTCCACTCAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR TCA 90 bp | CTGCAGAAGCAGCTGAAGCCCCCGTTCACGTTTTCACACACAGCATaGTCACCGCAGACAGAAGACTCGCTGCACTCATCTATATCTTGG | + |
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Preference number: 1 (lower is better) Translates to: LQKQLKPPFTFSHTA*SPQTEDSLHSSISW Trigger: CCAAGATATAGATGAGTGCAGCGAGTCTTCTGTCTGCGGTGATCATGCTGTGTGTGAAAACGTGAACGGGGGCTTCAGCTGCTTCTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR TCA 90 bp | CTGCAGAAGCAGCTGAAGCCCCCGTTCACGTTTTCACACACAGCATaGTCACCGCAGACAGAAGACTCGCTGCACTCATCTATATCAAAA | + |
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Preference number: 1 (lower is better) Translates to: LQKQLKPPFTFSHTA*SPQTEDSLHSSISK Trigger: TTTTGATATAGATGAGTGCAGCGAGTCTTCTGTCTGCGGTGATCATGCTGTGTGTGAAAACGTGAACGGGGGCTTCAGCTGCTTCTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR TCA 90 bp | ATTCATGCTTTCTTGGCAGTAAGAGCCATCATTAGGTGTGAACTGTaGCTTCCCCGTGGCGGTCTGATAACCTTCCCTGCAGAAGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: IHAFLAVRAIIRCEL*LPRGGLITFPAEAA Trigger: AGCTGCTTCTGCAGGGAAGGTTATCAGACCGCCACGGGGAAGTCACAGTTCACACCTAATGATGGCTCTTACTGCCAAGAAAGCATGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR TCA 90 bp | CTCATCTATATCTTGGCAGTAAGAGCCATCATTAGGTGTGAACTGTaGCTTCCCCGTAGCGGTCTGATAACCTTCCCTGCAGAAGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LIYILAVRAIIRCEL*LPRSGLITFPAEAA Trigger: AGCTGCTTCTGCAGGGAAGGTTATCAGACCGCTACGGGGAAGTCACAGTTCACACCTAATGATGGCTCTTACTGCCAAGATATAGATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR GCA 90 bp | ATGACAATTCCTTGTCAGAGAAGCCTTCGTCACTGCTTCATACTCTaGCCCTCCACGTCTCTTATGCTCTCCTTCCTGCAAAGGAACTCA | + |
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Preference number: 1 (lower is better) Translates to: MTIPCQRSLRHCFIL*PSTSLMLSFLQRNS Trigger: TGAGTTCCTTTGCAGGAAGGAGAGCATAAGAGACGTGGAGGGGCAGAGTATGAAGCAGTGACGAAGGCTTCTCTGACAAGGAATTGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR GCA 90 bp | CTTATAGCAGAGGAATGCAACTACTACATTGCCAGTTGTGCCATGTaGAGCCTTTCTCCTTGGGGATATTTTCACATAGCCTCCATCCAC | + |
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Preference number: 1 (lower is better) Translates to: LIAEECNYYIASCAM*SLSPWGYFHIASIH Trigger: GTGGATGGAGGCTATGTGAAAATATCCCCAAGGAGAAAGGCTGCACATGGCACAACTGGCAATGTAGTAGTTGCATTCCTCTGCTATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| 3UTR GCA 90 bp | GAGTGTCCAGTAAGAAGTTGTCAGATGAGGATAGCAAGGGACCAATaGTCTTATAGCAGAGGAATGCAACTACTACATTGCCAGTTGTGC | + |
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Preference number: 1 (lower is better) Translates to: ECPVRSCQMRIARDQ*SYSRGMQLLHCQLC Trigger: GCACAACTGGCAATGTAGTAGTTGCATTCCTCTGCTATAAGAGCATTGGTCCCTTGCTATCCTCATCTGACAACTTCTTACTGGACACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| 3UTR GCA 90 bp | TCACGTTTTCACACACAGCATGATCACCGCAGACAGAAGACTCGCTaGACTCATCTATATCAAAAGCAAGCTACATATTCAGATTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: SRFHTQHDHRRQKTR*THLYQKQATYSDSN Trigger: GTTTGAATCTGAATATGTAGCTTGCTTTTGATATAGATGAGTGCAGCGAGTCTTCTGTCTGCGGTGATCATGCTGTGTGTGAAAACGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR CAA 90 bp | GTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCTaGACAGGTGAGTGGTCTCTCCTGAGAGAACAACTCGGTCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VKVYHLTGSRNAKPF*TGEWSLLREQLGQA Trigger: TGCCTGACCGAGTTGTTCTCTCAGGAGAGACCACTCACCTGTCAAGAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR CAA 90 bp | ATGGTTTCCCCAAATTCAGTAAGAGTTGAGTTGAAGTGGGCATCCTaGTATGAAGTGGTGCTGTTCGGGTGGCCTAGTAGTGAGGATGAT | + |
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Preference number: 2 (lower is better) Translates to: MVSPNSVRVELKWAS*YEVVLFGWPSSEDD Trigger: ATCATCCTCACTACTAGGCCACCCGAACAGCACCACTTCATACAAGGATGCCCACTTCAACTCAACTCTTACTGAATTTGGGGAAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGATTTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCAGAAGCCTTCGTCACTaGTTCATACTCTGCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: RDLVKVYHLTGSRNAKPFRSLRH*FILCPS Trigger: GGAGGGGCAGAGTATGAAGCAGTGACGAAGGCTTCT...GAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAAATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR-3UTR CCA 90 bp | GGAGCGTACAGATATTTGTGGAGGGTCACTCTGTCTACCACGTGCAATAGTTTCTTCTTGACAGGTGAGTaGTCTCTCCTGAGAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: GAYRYLWRVTLSTTCNSFFLTGE*SLLREQ Trigger: TTGTTCTCTCAGGAGAGACCACTCACCTGTCAAGAA...GAAACTATTGCACGTGGTAGACAGAGTGACCCTCCACAAATATCTGTACGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR-3UTR CCA 90 bp | GGGACCAATGCTCTTATAGCAGAGGAATGCAACTACTACATTGCCAGTTGTGCCTGCAGCCTTTCTCCTTaGGGATATTTTCACATAGCC | + |
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Preference number: 2 (lower is better) Translates to: GTNALIAEECNYYIASCACSLSP*GYFHIA Trigger: GGCTATGTGAAAATATCCCCAAGGAGAAAGGCTGCA...GGCACAACTGGCAATGTAGTAGTTGCATTCCTCTGCTATAAGAGCATTGGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCGTACAGATATTTGTGGAGGGTCACTCTGTCTACCACGTGCAATAGTTTCAGCCAGTGGTTTCCTTaGGGACATTCATATATTTCT | + |
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Preference number: 2 (lower is better) Translates to: GAYRYLWRVTLSTTCNSFSQWFP*GHSYIS Trigger: AGAAATATATGAATGTCCTCAAGGAAACCACTGGCT...GAAACTATTGCACGTGGTAGACAGAGTGACCCTCCACAAATATCTGTACGCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTCCAAACCAGGAGACCCACACTGAAATACATCAGCAGCATGCTGACTTCCAATGTCCAGTAGATTaGATTATGCTTTCAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: RVPNQETHTEIHQQHADFQCPVD*IMLSGR Trigger: CCTTCCTGAAAGCATAATTCAATCTACTGGACATTG...GAAGTCAGCATGCTGCTGATGTATTTCAGTGTGGGTCTCCTGGTTTGGAACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR-3UTR TCA 90 bp | AGAGATTTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCGCCACACAGGTTATCTaGATCTTGGAATTTTCATCT | + |
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Preference number: 2 (lower is better) Translates to: RDLVKVYHLTGSRNAKPFATQVI*ILEFSS Trigger: AGATGAAAATTCCAAGATTCAGATAACCTGTGTGGC...GAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR-3UTR TCA 90 bp | CAGAATTTCTGTAGATTTCTTGGAGTAAAGTTGTCTGTTCTGTTATGGGTCCAATTTTCACACACAGCATaGTCACCGCAGACAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: QNFCRFLGVKLSVLLWVQFSHTA*SPQTED Trigger: GTCTTCTGTCTGCGGTGATCATGCTGTGTGTGAAAA...TTGGACCCATAACAGAACAGACAACTTTACTCCAAGAAATCTACAGAAATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCTTGACACACACTGTAGCTCTCTaGTCCATAATTTTATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LVKVYHLTGSRNAKPFLTHTVAL*SIILSH Trigger: GTGAGATAAAATTATGGACCAGAGAGCTACAGTGTG...TGTCAAGAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR-3UTR TCA 90 bp | GCCACAGACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAAGTGTACCATCTCCTGAGTTTATTGGAATaGCAATTCCTTGTCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: ATDLAQKKSRDLVKVYHLLSLLE*QFLVRE Trigger: TTCTCTGACAAGGAATTGTCATTCCAATAAACTCAG...GAGATGGTACACTTTGACTAAATCTCTGGATTTCTTCTGTGCTAAGTCTGTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGCTAATTGAGGCAGAAATCACTGAAGAAATGACTTTTTCCTTTCCTTCACTTATAGCAGAGGAATaGAACTACTACATTGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: FELIEAEITEEMTFSFPSLIAEE*NYYIAS Trigger: ACTGGCAATGTAGTAGTTGCATTCCTCTGCTATAAG...TGAAGGAAAGGAAAAAGTCATTTCTTCAGTGATTTCTGCCTCAATTAGCTCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| 3UTR TCA 72 bp | CTCCTGCTCCTCGCCATCCACCACAGCCACAGGCTCTaGAGAGGAGCGTACAGATATTTGTGGAGGGTCACT | + |
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Preference number: 3 (lower is better) Translates to: LLLLAIHHSHRL*RGAYRYLWRVT Trigger: AGTGACCCTCCACAAATATCTGTACGCTCCTCTTCAGAGCCTGTGGCTGTGGTGGATGGCGAGGAGCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR TCA 72 bp | ACTCGGTCAGGCAGCGATAGGGCTGCTTCATCCAGCTaGCTGTTCATTTTTCAGGAGAGGTCTCGACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: TRSGSDRAASSS*LFIFQERSRQA Trigger: AGCCTGTCGAGACCTCTCCTGAAAAATGAACAGTCAGCTGGATGAAGCAGCCCTATCGCTGCCTGACCGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR TCA 72 bp | CAGCTGAAGCCCCCGTTCACGTTTTCACACACAGCATaGTCACCGCAGACAGAAGACTCGCTGCACTCATCT | + |
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Preference number: 3 (lower is better) Translates to: QLKPPFTFSHTA*SPQTEDSLHSS Trigger: AGATGAGTGCAGCGAGTCTTCTGTCTGCGGTGATCATGCTGTGTGTGAAAACGTGAACGGGGGCTTCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR CCA 72 bp | GGCTCTAGAAATGCAAAGCCCTTCTTGACAGGTGAGTaGTCTCTCCTGAGAGAACAACTCGGTCAGGCAGCG | + |
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Preference number: 3 (lower is better) Translates to: GSRNAKPFLTGE*SLLREQLGQAA Trigger: CGCTGCCTGACCGAGTTGTTCTCTCAGGAGAGACCACTCACCTGTCAAGAAGGGCTTTGCATTTCTAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR TCA 72 bp | TTCTTGGCAGTAAGAGCCATCATTAGGTGTGAACTGTaGCTTCCCCGTGGCGGTCTGATAACCTTCCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: FLAVRAIIRCEL*LPRGGLITFPA Trigger: TGCAGGGAAGGTTATCAGACCGCCACGGGGAAGTCACAGTTCACACCTAATGATGGCTCTTACTGCCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR TCA 72 bp | ATCTTGGCAGTAAGAGCCATCATTAGGTGTGAACTGTaGCTTCCCCGTAGCGGTCTGATAACCTTCCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: ILAVRAIIRCEL*LPRSGLITFPA Trigger: TGCAGGGAAGGTTATCAGACCGCTACGGGGAAGTCACAGTTCACACCTAATGATGGCTCTTACTGCCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTTCCAAACCAGGAGACCCACACTGAAATACATCAGCAGCATGCTGACTTCAATGCAAAGCCCTTCTaGACAGGTGAGTGGTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: RVPNQETHTEIHQQHADFNAKPF*TGEWSL Trigger: GAGAGACCACTCACCTGTCAAGAAGGGCTTTGCATT...GAAGTCAGCATGCTGCTGATGTATTTCAGTGTGGGTCTCCTGGTTTGGAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR GCA 72 bp | CAATGCTCTTATAGCAGAGGAATGCAACTACTACATTaGCAGTTGTGCCATGTGCAGCCTTTCTCCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: QCSYSRGMQLLH*QLCHVQPFSLG Trigger: CCCCAAGGAGAAAGGCTGCACATGGCACAACTGGCAATGTAGTAGTTGCATTCCTCTGCTATAAGAGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| 3UTR GCA 72 bp | CACACACAGCATGATCACCGCAGACAGAAGACTCGCTaGACTCATCTATATCTTGGCAGTAAGAGCCATCAT | + |
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Preference number: 3 (lower is better) Translates to: HTQHDHRRQKTR*THLYLGSKSHH Trigger: ATGATGGCTCTTACTGCCAAGATATAGATGAGTGCAGCGAGTCTTCTGTCTGCGGTGATCATGCTGTGTGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR GCA 72 bp | GAGGAATGCAACTACTACATTGCCAGTTGTGCCATGTaGAGCCTTTCTCCTTGGGGATATTTTCACATAGCC | + |
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Preference number: 3 (lower is better) Translates to: EECNYYIASCAM*SLSPWGYFHIA Trigger: GGCTATGTGAAAATATCCCCAAGGAGAAAGGCTGCACATGGCACAACTGGCAATGTAGTAGTTGCATTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| 3UTR CCA 72 bp | ATGGTTTCCCCAAATTCAGTAAGAGTTGAGTTGAAGTaGGCATCCTTGTATGAAGTGGTGCTGTTCGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: MVSPNSVRVELK*ASLYEVVLFGW Trigger: CCACCCGAACAGCACCACTTCATACAAGGATGCCCACTTCAACTCAACTCTTACTGAATTTGGGGAAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR TCA 72 bp | GTTTTGATATCCTATTTCTACAGTCCCAACCCAGAATaGCAATGGCAGTCATGGGCCACAGACTTAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: VLISYFYSPNPE*QWQSWATDLAQ Trigger: CTGTGCTAAGTCTGTGGCCCATGACTGCCATTGTCATTCTGGGTTGGGACTGTAGAAATAGGATATCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR CCA 72 bp | TACATTGCCAGTTGTGCCATGTGCAGCCTTTCTCCTTaGGGATATTTTCACATAGCCTCCATCCACATTCAT | + |
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Preference number: 3 (lower is better) Translates to: YIASCAMCSLSP*GYFHIASIHIH Trigger: ATGAATGTGGATGGAGGCTATGTGAAAATATCCCCAAGGAGAAAGGCTGCACATGGCACAACTGGCAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTTCCAAACCAGGAGACCCACACTGAAATACATCAGCAGCATGCTGACTTCAAACAGGCTCATTTTTaGCCACACAGGTTATCTGAA | + |
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Preference number: 3 (lower is better) Translates to: RVPNQETHTEIHQQHADFKQAHF*PHRLSE Trigger: TTCAGATAACCTGTGTGGCAAAAAATGAGCCTGTTT...GAAGTCAGCATGCTGCTGATGTATTTCAGTGTGGGTCTCCTGGTTTGGAACTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR GCA 72 bp | TATAGCAGAGGAATGCAACTACTACATTGCCAGTTGTaGCATGTGCAGCCTTTCTCCTTGGGGATATTTTCA | + |
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Preference number: 3 (lower is better) Translates to: YSRGMQLLHCQL*HVQPFSLGIFS Trigger: TGAAAATATCCCCAAGGAGAAAGGCTGCACATGGCACAACTGGCAATGTAGTAGTTGCATTCCTCTGCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| 3UTR GCA 72 bp | GTAAGAAGTTGTCAGATGAGGATAGCAAGGGACCAATaGTCTTATAGCAGAGGAATGCAACTACTACATTGC | + |
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Preference number: 3 (lower is better) Translates to: VRSCQMRIARDQ*SYSRGMQLLHC Trigger: GCAATGTAGTAGTTGCATTCCTCTGCTATAAGAGCATTGGTCCCTTGCTATCCTCATCTGACAACTTCTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| 3UTR TCA 72 bp | GTAGTGAGGATGATTCAGTTAGGATCTCTATGTATGTaGCTATATCCATCAGAGAGAGCTCAGCCTCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: VVRMIQLGSLCM*LYPSERAQPQN Trigger: ATTCTGAGGCTGAGCTCTCTCTGATGGATATAGTCACATACATAGAGATCCTAACTGAATCATCCTCACTAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
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| 3UTR-3UTR CAA 90 bp | GCCACAGACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAAGTGTACCATCTCAAGCCAGTGGTTTCCTaGAGGACATTCATATATTTC | + |
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Preference number: 3 (lower is better) Translates to: ATDLAQKKSRDLVKVYHLKPVVS*RTFIYF Trigger: GAAATATATGAATGTCCTCAAGGAAACCACTGGCTT...GAGATGGTACACTTTGACTAAATCTCTGGATTTCTTCTGTGCTAAGTCTGTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR-3UTR CAA 90 bp | TTTGAGCTAATTGAGGCAGAAATCACTGAAGAAATGACTTTTTCCTTTCCTTCAGTGCAGCCTTTCTCCTaGGGGATATTTTCACATAGC | + |
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Preference number: 3 (lower is better) Translates to: FELIEAEITEEMTFSFPSVQPFS*GIFSHS Trigger: GCTATGTGAAAATATCCCCAAGGAGAAAGGCTGCAC...TGAAGGAAAGGAAAAAGTCATTTCTTCAGTGATTTCTGCCTCAATTAGCTCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGAGCTAATTGAGGCAGAAATCACTGAAGAAATGACTTTTTCCTTTCCTTCACATGCTTCATGTGAGTaGAATCAAAAGCAAAAACCT | + |
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Preference number: 3 (lower is better) Translates to: FELIEAEITEEMTFSFPSHASCE*NQKQKP Trigger: AGGTTTTTGCTTTTGATTCAACTCACATGAAGCATG...TGAAGGAAAGGAAAAAGTCATTTCTTCAGTGATTTCTGCCTCAATTAGCTCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| CDS-3UTR TCA 90 bp | AGAGTTCCAAACCAGGAGACCCACACTGAAATACATCAGCAGCATGCTGACTTCCCCTGCAGAAGCAGCTaGAGCCCCCGTTCACGTTTT | + |
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Preference number: 4 (lower is better) Translates to: RVPNQETHTEIHQQHADFPCRSS*SPRSRF Trigger: AAAACGTGAACGGGGGCTTCAGCTGCTTCTGCAGGG...GAAGTCAGCATGCTGCTGATGTATTTCAGTGTGGGTCTCCTGGTTTGGAACTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CCA 90 bp | ACTTCCCTCAGGGTAGTGAGAGTGCTCCAACTGAGTGGAGGTCAGCTACCCTCCAGCTGCCATTGTTCATaGCATCAACTGAGTAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TSLRVVRVLQLSGGQLPSSCHCS*HQLSSS Trigger: GGAACTACTCAGTTGATGCCATGAACAATGGCAGCT...GGAGGGTAGCTGACCTCCACTCAGTTGGAGCACTCTCACTACCCTGAGGGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR GCA 90 bp | CTCATTACTAAGGTGGTAGGGAACTCGTTTGAAAGGCAACATGAGTCACAAAGACAGAGTACCCCTGGCTaGAGAAGCAGGCTTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: LITKVVGNSFERQHESQRQSTPG*RSRLPH Trigger: GTGTGGAAGCCTGCTTCTGCAGCCAGGGGTACTCTG...TCTTTGTGACTCATGTTGCCTTTCAAACGAGTTCCCTACCACCTTAGTAATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| 3UTR CAA 72 bp | TACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCTaGACAGGTGAGTGGTCTCTCCTGAGAGAACAACTC | + |
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Preference number: 4 (lower is better) Translates to: YHLTGSRNAKPF*TGEWSLLREQL Trigger: GAGTTGTTCTCTCAGGAGAGACCACTCACCTGTCAAGAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR TCA 90 bp | CTCATTACTAAGGTGGTAGGGAACTCGTTTGAAAGGCAACATGAGTCACAAAGAGTGGGCATCCTTGTATaGAGTGGTGCTGTTCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LITKVVGNSFERQHESQRVGILV*SGAVRV Trigger: CACCCGAACAGCACCACTTCATACAAGGATGCCCAC...TCTTTGTGACTCATGTTGCCTTTCAAACGAGTTCCCTACCACCTTAGTAATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR TCA 90 bp | GGGACCAATGCTCTTATAGCAGAGGAATGCAACTACTACATTGCCAGTTGTGCCCCAGACAGTAAGAGTTaGGTTGAAGTGGGCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: GTNALIAEECNYYIASCAPDSKS*VEVGIL Trigger: AAGGATGCCCACTTCAACTCAACTCTTACTGTCTGG...GGCACAACTGGCAATGTAGTAGTTGCATTCCTCTGCTATAAGAGCATTGGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| CDS-3UTR CCA 90 bp | AGAGATTTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCACTGTGACTTCCCCGTaGCGGTCTGATAACCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDLVKVYHLTGSRNAKPFTVTSP*RSDNLP Trigger: GGGAAGGTTATCAGACCGCCACGGGGAAGTCACAGT...GAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAAATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR TCA 90 bp | CTCATTACTAAGGTGGTAGGGAACTCGTTTGAAAGGCAACATGAGTCACAAAGACAGCACAGGTTCTTGTaGATCGTGGTCCTGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LITKVVGNSFERQHESQRQHRFL*IVVLVL Trigger: AAGCACCAGGACCACGATTCACAAGAACCTGTGCTG...TCTTTGTGACTCATGTTGCCTTTCAAACGAGTTCCCTACCACCTTAGTAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR GCA 90 bp | CTCATTACTAAGGTGGTAGGGAACTCGTTTGAAAGGCAACATGAGTCACAAAGAGGTGAATGCCTTCGATaGACATCCAGGCAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LITKVVGNSFERQHESQRGECLR*TSRQRQ Trigger: CTGCCTTTGCCTGGATGTGCATCGAAGGCATTCACC...TCTTTGTGACTCATGTTGCCTTTCAAACGAGTTCCCTACCACCTTAGTAATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | GACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAAGTGTACCATCTCACAGGCCCCCAAAGATCCAGGTaGTACCCAGAAGGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLAQKKSRDLVKVYHLTGPQRSR*YPEGRG Trigger: TCCTCTTCCTTCTGGGTACCACCTGGATCTTTGGGG...GCCTGTGAGATGGTACACTTTGACTAAATCTCTGGATTTCTTCTGTGCTAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| 3UTR CAA 72 bp | CTACATTGCCAGTTGTGCCATGTGCAGCCTTTCTCCTaGGGGATATTTTCACATAGCCTCCATCCACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHCQLCHVQPFS*GIFSHSLHPHS Trigger: TGAATGTGGATGGAGGCTATGTGAAAATATCCCCAAGGAGAAAGGCTGCACATGGCACAACTGGCAATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTGCCACACAGGTTATCTGAATCTTGGAATTTTCATCTCATTGCAGCTGTAGGTGTGGGTGTCGTTTaGGTGTGTCAGCTCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLPHRLSESWNFHLIAAVGVGVV*VCQLTA Trigger: GGCTGTGAGCTGACACACTCAAACGACACCCACACC...TACAGCTGCAATGAGATGAAAATTCCAAGATTCAGATAACCTGTGTGGCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGGTTATCTGAATCTTGGAATTTTCATCTCATTGCAGCTGTATTCCCAGAGTACCCCTaGCTGCAGAAGCAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLPHRLSESWNFHLIAAVFPEYP*LQKQAS Trigger: GGAAGCCTGCTTCTGCAGCCAGGGGTACTCTGGGAA...TACAGCTGCAATGAGATGAAAATTCCAAGATTCAGATAACCTGTGTGGCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR TCA 90 bp | GACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAAGTGTACCATCTCACAGGCTTTTCACACACAGCATaGTCACCGCAGACAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DLAQKKSRDLVKVYHLTGFSHTA*SPQTED Trigger: GTCTTCTGTCTGCGGTGATCATGCTGTGTGTGAAAA...GCCTGTGAGATGGTACACTTTGACTAAATCTCTGGATTTCTTCTGTGCTAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGGCAACATGAGTCACAAAGATATCAAGCCAGTGGTTTCCTTGAGGACAGGAGACACGTTGTCTTaGTGCAGTTTTGTGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKGNMSHKDIKPVVSLRTGDTLS*CSFVCR Trigger: CCTACACACAAAACTGCAGCAAGACAACGTGTCTCC...TGTCCTCAAGGAAACCACTGGCTTGATATCTTTGTGACTCATGTTGCCTTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR GCA 90 bp | AGAGATTTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCCTGCAAGAAAGAGGCTaGAGCACAGGTTCTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RDLVKVYHLTGSRNAKPFLQERG*STGSCE Trigger: TTCACAAGAACCTGTGCTGCAGCCTCTTTCTTGCAG...GAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAAATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR GCA 90 bp | CTCATTACTAAGGTGGTAGGGAACTCGTTTGAAAGGCAACATGAGTCACAAAGAGTCACAACAGATGCATaGACTACATGGAGAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LITKVVGNSFERQHESQRVTTDA*TTWRTP Trigger: TGGGGTTCTCCATGTAGTGCATGCATCTGTTGTGAC...TCTTTGTGACTCATGTTGCCTTTCAAACGAGTTCCCTACCACCTTAGTAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| 3UTR CAA 72 bp | TCTTATAGCAGAGGAATGCAACTACTACATTGCCAGTaGTGCCATGTGCAGCCTTTCTCCTTGGGGATATTT | + |
|
Preference number: 4 (lower is better) Translates to: SYSRGMQLLHCQ*CHVQPFSLGIF Trigger: AAATATCCCCAAGGAGAAAGGCTGCACATGGCACAACTGGCAATGTAGTAGTTGCATTCCTCTGCTATAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
||
| 3UTR CAA 72 bp | TGTTTGCAGCGATGCAGGCATGCTCTAAGTGGCAATTaGAATTCATGCTTTCTTGGCAGTAAGAGCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLQRCRHALSGN*NSCFLGSKSHH Trigger: ATGATGGCTCTTACTGCCAAGAAAGCATGAATTCAAATTGCCACTTAGAGCATGCCTGCATCGCTGCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
||
| CDS-3UTR TCA 90 bp | CAATGGCAGTCATGGGCCACAGACTTAGCACAGAAGAAATCCAGAGATTTAGTCGGATCTCTATGTATGTaGCTATATCCATCAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QWQSWATDLAQKKSRDLVGSLCM*LYPSER Trigger: TCTCTCTGATGGATATAGTCACATACATAGAGATCC...GACTAAATCTCTGGATTTCTTCTGTGCTAAGTCTGTGGCCCATGACTGCCATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR TCA 90 bp | CAATGGCAGTCATGGGCCACAGACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAATTCAGTAAGAGTTaGGTTGAAGTGGGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QWQSWATDLAQKKSRDLVKFSKS*VEVGIL Trigger: AAGGATGCCCACTTCAACTCAACTCTTACTGAATTT...GACTAAATCTCTGGATTTCTTCTGTGCTAAGTCTGTGGCCCATGACTGCCATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCCAAACCAGGAGACCCACACTGAAATACATCAGCAGCATGCTGACTTCGAATTCATATCAAACTaGGAATTCTTCTGGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVPNQETHTEIHQQHADFEFISN*EFFWVF Trigger: GAACACCCAGAAGAATTCTCAGTTTGATATGAATTC...GAAGTCAGCATGCTGCTGATGTATTTCAGTGTGGGTCTCCTGGTTTGGAACTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR TCA 90 bp | GCCACAGACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAAGTGTACCATCTCGTTCATGGCATCAACTaGGTAGTTCCAAAAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ATDLAQKKSRDLVKVYHLVHGIN*VVPKGT Trigger: TGTGCCTTTTGGAACTACTCAGTTGATGCCATGAAC...GAGATGGTACACTTTGACTAAATCTCTGGATTTCTTCTGTGCTAAGTCTGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR GCA 90 bp | CAATGGCAGTCATGGGCCACAGACTTAGCACAGAAGAAATCCAGAGATTTAGTCGGCAATTTGAATTCATaGTTTCTTGGCAGTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QWQSWATDLAQKKSRDLVGNLNS*FLGSKS Trigger: GCTCTTACTGCCAAGAAAGCATGAATTCAAATTGCC...GACTAAATCTCTGGATTTCTTCTGTGCTAAGTCTGTGGCCCATGACTGCCATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR GCA 90 bp | AGAGATTTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCATGCAACTACTACATTaGCAGTTGTGCCATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDLVKVYHLTGSRNAKPFMQLLH*QLCHVQ Trigger: CTGCACATGGCACAACTGGCAATGTAGTAGTTGCAT...GAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAAATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGGCAACATGAGTCACAAAGATATCAAGCCAGTGGTTTCCTTGAGGACAGGTTCTTGTGAATCGTaGTCCTGGTGCTTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LKGNMSHKDIKPVVSLRTGSCES*SWCFGF Trigger: AAATCCAAAGCACCAGGACCACGATTCACAAGAACC...TGTCCTCAAGGAAACCACTGGCTTGATATCTTTGTGACTCATGTTGCCTTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR TCA 90 bp | TTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCTTGACAAGAGATTCACAAGAATaGTTAGACACGCTGGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVKVYHLTGSRNAKPFLTRDSQE*LDTLVL Trigger: TAGGACCAGCGTGTCTAATCATTCTTGTGAATCTCT...TGTCAAGAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | AGAGATTTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCAACAATTCAGCAAAGTaGAGAAACCCACTAGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RDLVKVYHLTGSRNAKPFNNSAK*RNPLEA Trigger: CGCTTCTAGTGGGTTTCTCCACTTTGCTGAATTGTT...GAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAAATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | GCAATGTCCAGTAGATTGAATTATGCTTTCAGGAAGGTTCAGAACAATGACTCAGTGGTCCTGGTGCTTTaGATTTCACTGAAGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: AMSSRLNYAFRKVQNNDSVVLVL*ISLKNQ Trigger: CTGGTTCTTCAGTGAAATCCAAAGCACCAGGACCAC...TGAGTCATTGTTCTGAACCTTCCTGAAAGCATAATTCAATCTACTGGACATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | TTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCTTGACATTCAGTCCAGCAGTGTaGCGGAAAACTTTGTATATG | + |
|
Preference number: 4 (lower is better) Translates to: LVKVYHLTGSRNAKPFLTFSPAV*RKTLYM Trigger: CATATACAAAGTTTTCCGCCACACTGCTGGACTGAA...TGTCAAGAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | GCCACAGACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAAGTGTACCATCTCATAGCAACTAACTTCTaGTTTCAGTCCAGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATDLAQKKSRDLVKVYHLIATNF*FQSSSV Trigger: CACACTGCTGGACTGAAACCAGAAGTTAGTTGCTAT...GAGATGGTACACTTTGACTAAATCTCTGGATTTCTTCTGTGCTAAGTCTGTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| 3UTR CAA 72 bp | TTATTGATGGTTTCCCCAAATTCAGTAAGAGTTGAGTaGAAGTGGGCATCCTTGTATGAAGTGGTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLMVSPNSVRVE*KWASLYEVVLF Trigger: GAACAGCACCACTTCATACAAGGATGCCCACTTCAACTCAACTCTTACTGAATTTGGGGAAACCATCAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238268.2 |
||
| CDS-3UTR TCA 90 bp | GACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAAGTGTACCATCTCACAGGCTGTGCATCAGTTTTGTaGGATGAAGTCTTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLAQKKSRDLVKVYHLTGCASVL*DEVFCD Trigger: ATCACAGAAGACTTCATCTCACAAAACTGATGCACA...GCCTGTGAGATGGTACACTTTGACTAAATCTCTGGATTTCTTCTGTGCTAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR GCA 90 bp | GCAATGTCCAGTAGATTGAATTATGCTTTCAGGAAGGTTCAGAACAATGACTCAGACACGTTGTCTTGCTaGAGTTTTGTGTGTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AMSSRLNYAFRKVQNNDSDTLSC*SFVCRN Trigger: GTTCCTACACACAAAACTGCAGCAAGACAACGTGTC...TGAGTCATTGTTCTGAACCTTCCTGAAAGCATAATTCAATCTACTGGACATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | AGAGATTTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCCAGGCATGCTCTAAGTaGCAATTTGAATTCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDLVKVYHLTGSRNAKPFQACSK*QFEFML Trigger: AAGCATGAATTCAAATTGCCACTTAGAGCATGCCTG...GAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAAATCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | GCAATGTCCAGTAGATTGAATTATGCTTTCAGGAAGGTTCAGAACAATGACTCATGCAGCCTTTCTCCTTaGGGATATTTTCACATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AMSSRLNYAFRKVQNNDSCSLSP*GYFHIA Trigger: GGCTATGTGAAAATATCCCCAAGGAGAAAGGCTGCA...TGAGTCATTGTTCTGAACCTTCCTGAAAGCATAATTCAATCTACTGGACATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGGTTATCTGAATCTTGGAATTTTCATCTCATTGCAGCTGTAGATGCATGCACTACATaGAGAACCCCAAAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPHRLSESWNFHLIAAVDACTT*RTPKIQ Trigger: CTGGATCTTTGGGGTTCTCCATGTAGTGCATGCATC...TACAGCTGCAATGAGATGAAAATTCCAAGATTCAGATAACCTGTGTGGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | TTTTTGCCACACAGGTTATCTGAATCTTGGAATTTTCATCTCATTGCAGCTGTATCCAACAACTACAGCTaGGCTGAGATAGCCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLPHRLSESWNFHLIAAVSNNYS*AEIAKD Trigger: ATCTTTGGCTATCTCAGCCCAGCTGTAGTTGTTGGA...TACAGCTGCAATGAGATGAAAATTCCAAGATTCAGATAACCTGTGTGGCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CCA 90 bp | GAACATGGATGTAGCAAATTTAGATCTGGGGCTTTTTACTTCAGACCAATTCCCAAAATGAACATCCCTTaGAAAGCATTGCTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EHGCSKFRSGAFYFRPIPKMNIP*KALLTV Trigger: CACAGTCAGCAATGCTTTCCAAGGGATGTTCATTTT...GGGAATTGGTCTGAAGTAAAAAGCCCCAGATCTAAATTTGCTACATCCATGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR GCA 90 bp | GCAATGTCCAGTAGATTGAATTATGCTTTCAGGAAGGTTCAGAACAATGACTCACTTATAGCAGAGGAATaGAACTACTACATTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AMSSRLNYAFRKVQNNDSLIAEE*NYYIAS Trigger: ACTGGCAATGTAGTAGTTGCATTCCTCTGCTATAAG...TGAGTCATTGTTCTGAACCTTCCTGAAAGCATAATTCAATCTACTGGACATTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR TCA 90 bp | GTTGAATCAAAAGCAAAAACCTTGAGAGCCAAGTCAGTAGAATTCATATCAAACGGATCTCTATGTATGTaGCTATATCCATCAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VESKAKTLRAKSVEFISNGSLCM*LYPSER Trigger: TCTCTCTGATGGATATAGTCACATACATAGAGATCC...GTTTGATATGAATTCTACTGACTTGGCTCTCAAGGTTTTTGCTTTTGATTCAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
||
| 3UTR CAA 72 bp | AACAGCACAAGAATTAAAATTGCAATGTCCAGTAGATaGAATTATGCTTTCAGGAAGGTTCAGAACAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: NSTRIKIAMSSR*NYAFRKVQNND Trigger: GTCATTGTTCTGAACCTTCCTGAAAGCATAATTCAATCTACTGGACATTGCAATTTTAATTCTTGTGCTGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS-3UTR CAA 90 bp | ACTTCCCTCAGGGTAGTGAGAGTGCTCCAACTGAGTGGAGGTCAGCTACCCTCCGCTCACAGCCCTCCGTaGACCAGCTGCCATTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSLRVVRVLQLSGGQLPSAHSPP*TSCHCS Trigger: TGAACAATGGCAGCTGGTCAACGGAGGGCTGTGAGC...GGAGGGTAGCTGACCTCCACTCAGTTGGAGCACTCTCACTACCCTGAGGGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS CCA 90 bp | TCACAACAGATGCATGCACTACATGGAGAACCCCAAAGATCCAGGTaGTACCCAGAAGGAAGAGGAGGGCTAGGGCACCTCTGGCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SQQMHALHGEPQRSR*YPEGRGGLGHLWHK Trigger: CTTGTGCCAGAGGTGCCCTAGCCCTCCTCTTCCTTCTGGGTACCACCTGGATCTTTGGGGTTCTCCATGTAGTGCATGCATCTGTTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS TCA 90 bp | CGCAGACAGAAGACTCGCTGCACTCATCTATATCTTCACAAATCGTaGCGCCATTCCCAGAGTACCCCTGGCTGCAGAAGCAGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRQKTRCTHLYLHKS*RHSQSTPGCRSRLP Trigger: TGGAAGCCTGCTTCTGCAGCCAGGGGTACTCTGGGAATGGCGTCACGATTTGTGAAGATATAGATGAGTGCAGCGAGTCTTCTGTCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
||
| CDS GCA 90 bp | GGGTGTCGTTTGAGTGTGTCAGCTCACAGCCCTCCGTTGACCAGCTaGCATTGTTCATGGCATCAACTGAGTAGTTCCAAAAGGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: GCRLSVSAHSPPLTS*HCSWHQLSSSKRHT Trigger: AGTGTGCCTTTTGGAACTACTCAGTTGATGCCATGAACAATGGCAGCTGGTCAACGGAGGGCTGTGAGCTGACACACTCAAACGACACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS TCA 90 bp | CTGCAGAAGCAGCTGAAGCCCCCGTTCACGTTTTCACACACAGCATaGTCACCGCAGACAGAAGACTCGCTGCACTCATCTATATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQKQLKPPFTFSHTA*SPQTEDSLHSSISS Trigger: TGAAGATATAGATGAGTGCAGCGAGTCTTCTGTCTGCGGTGATCATGCTGTGTGTGAAAACGTGAACGGGGGCTTCAGCTGCTTCTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
||
| CDS TCA 90 bp | CCAATGGAAGAAGTAGAGGACATCAAAATCGCAAAGTGTGTCAGGTaGCTACAGCGGCAGGAGGTGTGGGTGTCGTTTGAGTGTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PMEEVEDIKIAKCVR*LQRQEVWVSFECVS Trigger: GCTGACACACTCAAACGACACCCACACCTCCTGCCGCTGTAGTCACCTGACACACTTTGCGATTTTGATGTCCTCTACTTCTTCCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS GCA 90 bp | TTGGAAAGCATTGCTGACTGTGAAGAGGTAGGCTGTCACAACAGATaGATGCACTACATGGAGAACCCCAAAGATCCAGGTGGTACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LESIADCEEVGCHNR*MHYMENPKDPGGTQ Trigger: CTGGGTACCACCTGGATCTTTGGGGTTCTCCATGTAGTGCATGCATCTGTTGTGACAGCCTACCTCTTCACAGTCAGCAATGCTTTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
||
| CDS GCA 90 bp | CATTGTGCACTTCGCACTTGGCATTGGGGAGACACGTTGTCTTGCTaGAGTTTTGTGTGTAGGAACAATTCAGCAAAGTGGAGAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: HCALRTWHWGDTLSC*SFVCRNNSAKWRNP Trigger: TGGGTTTCTCCACTTTGCTGAATTGTTCCTACACACAAAACTGCAGCAAGACAACGTGTCTCCCCAATGCCAAGTGCGAAGTGCACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
||
| CDS GCA 90 bp | CACCATTGTGCACTTCGCACTTGGCATTGGGGAGACACGTTGTCTTaGTGCAGTTTTGTGTGTAGGAACAATTCAGCAAAGTGGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HHCALRTWHWGDTLS*CSFVCRNNSAKWRN Trigger: GTTTCTCCACTTTGCTGAATTGTTCCTACACACAAAACTGCAGCAAGACAACGTGTCTCCCCAATGCCAAGTGCGAAGTGCACAATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
||
| CDS-3UTR CAA 90 bp | TTAGTCAAAGTGTACCATCTCACAGGCTCTAGAAATGCAAAGCCCTTCTTGACAAGGTGTGGGTGTCGTTaGAGTGTGTCAGCTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVKVYHLTGSRNAKPFLTRCGCR*SVSAHS Trigger: GCTGTGAGCTGACACACTCAAACGACACCCACACCT...TGTCAAGAAGGGCTTTGCATTTCTAGAGCCTGTGAGATGGTACACTTTGACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | GGAGCGTACAGATATTTGTGGAGGGTCACTCTGTCTACCACGTGCAATAGTTTCGTGTCCAGTAAGAAGTaGTCAGATGAGGATAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GAYRYLWRVTLSTTCNSFVSSKK*SDEDSK Trigger: CTTGCTATCCTCATCTGACAACTTCTTACTGGACAC...GAAACTATTGCACGTGGTAGACAGAGTGACCCTCCACAAATATCTGTACGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | AGAGTTCCAAACCAGGAGACCCACACTGAAATACATCAGCAGCATGCTGACTTCTGTCTTGCTGCAGTTTaGTGTGTAGGAACAATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVPNQETHTEIHQQHADFCLAAV*CVGTIQ Trigger: CTGAATTGTTCCTACACACAAAACTGCAGCAAGACA...GAAGTCAGCATGCTGCTGATGTATTTCAGTGTGGGTCTCCTGGTTTGGAACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | TTGAAAGGCAACATGAGTCACAAAGATATCAAGCCAGTGGTTTCCTTGAGGACACATTGGGGAGACACGTaGTCTTGCTGCAGTTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LKGNMSHKDIKPVVSLRTHWGDT*SCCSFV Trigger: CACAAAACTGCAGCAAGACAACGTGTCTCCCCAATG...TGTCCTCAAGGAAACCACTGGCTTGATATCTTTGTGACTCATGTTGCCTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | CAGATGAGGATAGCAAGGGACCAATGCTCTTATAGCAGAGGAATGCAACTACTAGAAGTCTTCTGTGATTaGTCGGTAACTGGTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QMRIARDQCSYSRGMQLLEVFCD*SVTGPT Trigger: TGTGGGACCAGTTACCGACAAATCACAGAAGACTTC...TAGTAGTTGCATTCCTCTGCTATAAGAGCATTGGTCCCTTGCTATCCTCATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| CDS-3UTR CAA 90 bp | TTGAAAGGCAACATGAGTCACAAAGATATCAAGCCAGTGGTTTCCTTGAGGACACTACTACATTGCCAGTaGTGCCATGTGCAGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKGNMSHKDIKPVVSLRTLLHCQ*CHVQPF Trigger: GAAAGGCTGCACATGGCACAACTGGCAATGTAGTAG...TGTCCTCAAGGAAACCACTGGCTTGATATCTTTGTGACTCATGTTGCCTTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | GACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAAGTGTACCATCTCACAGGCGTTGACCAGCTGCCATaGTTCATGGCATCAACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DLAQKKSRDLVKVYHLTGVDQLP*FMASTE Trigger: CTCAGTTGATGCCATGAACAATGGCAGCTGGTCAAC...GCCTGTGAGATGGTACACTTTGACTAAATCTCTGGATTTCTTCTGTGCTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | GACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAAGTGTACCATCTCACAGGCCGTGGTCCTGGTGCTTaGGATTTCACTGAAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: DLAQKKSRDLVKVYHLTGRGPGA*DFTEEP Trigger: TGGTTCTTCAGTGAAATCCAAAGCACCAGGACCACG...GCCTGTGAGATGGTACACTTTGACTAAATCTCTGGATTTCTTCTGTGCTAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | AGAGTTCCAAACCAGGAGACCCACACTGAAATACATCAGCAGCATGCTGACTTCAAGCTCCAAATGAAGTaGTTTTCAGTGCTCAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RVPNQETHTEIHQQHADFKLQMK*FSVLSQ Trigger: TTGGCTGAGCACTGAAAACAACTTCATTTGGAGCTT...GAAGTCAGCATGCTGCTGATGTATTTCAGTGTGGGTCTCCTGGTTTGGAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS CCA 90 bp | GGCACCTCTGGCACAAGACCTTATGTTCTCATAGCAACTAACTTCTaGTTTCAGTCCAGCAGTGTGGCGGAAAACTTTGTATATGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: GTSGTRPYVLIATNF*FQSSSVAENFVYDN Trigger: GTTATCATATACAAAGTTTTCCGCCACACTGCTGGACTGAAACCAGAAGTTAGTTGCTATGAGAACATAAGGTCTTGTGCCAGAGGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | GGAGCGTACAGATATTTGTGGAGGGTCACTCTGTCTACCACGTGCAATAGTTTCTCAAAAGCAAAAACCTaGAGAGCCAAGTCAGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GAYRYLWRVTLSTTCNSFSKAKT*RAKSVE Trigger: TTCTACTGACTTGGCTCTCAAGGTTTTTGCTTTTGA...GAAACTATTGCACGTGGTAGACAGAGTGACCCTCCACAAATATCTGTACGCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | GACTTAGCACAGAAGAAATCCAGAGATTTAGTCAAAGTGTACCATCTCACAGGCGTGCAGCCTTTCTCCTaGGGGATATTTTCACATAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLAQKKSRDLVKVYHLTGVQPFS*GIFSHS Trigger: GCTATGTGAAAATATCCCCAAGGAGAAAGGCTGCAC...GCCTGTGAGATGGTACACTTTGACTAAATCTCTGGATTTCTTCTGTGCTAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS CCA 90 bp | AAATTCCTATTTAAGGAAAACCAGACAGTAAGAGTTGAGTTGAAGTaGGCATCCTTGTATGAAGTGGTGCTGTTCGGGTGGCCTAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: KFLFKENQTVRVELK*ASLYEVVLFGWPSS Trigger: ACTACTAGGCCACCCGAACAGCACCACTTCATACAAGGATGCCCACTTCAACTCAACTCTTACTGTCTGGTTTTCCTTAAATAGGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| CDS-3UTR CAA 90 bp | GAACATGGATGTAGCAAATTTAGATCTGGGGCTTTTTACTTCAGACCAATTCCCGAAGTCTTCTGTGATTaGTCGGTAACTGGTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: EHGCSKFRSGAFYFRPIPEVFCD*SVTGPT Trigger: TGTGGGACCAGTTACCGACAAATCACAGAAGACTTC...GGGAATTGGTCTGAAGTAAAAAGCCCCAGATCTAAATTTGCTACATCCATGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | CAGATGAGGATAGCAAGGGACCAATGCTCTTATAGCAGAGGAATGCAACTACTAACAGTAAGAGTTGAGTaGAAGTGGGCATCCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QMRIARDQCSYSRGMQLLTVRVE*KWASLY Trigger: ATACAAGGATGCCCACTTCAACTCAACTCTTACTGT...TAGTAGTTGCATTCCTCTGCTATAAGAGCATTGGTCCCTTGCTATCCTCATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| CDS-3UTR CAA 90 bp | TTGAAAGGCAACATGAGTCACAAAGATATCAAGCCAGTGGTTTCCTTGAGGACATTTCTTGGAGTAAAGTaGTCTGTTCTGTTATGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKGNMSHKDIKPVVSLRTFLGVK*SVLLWV Trigger: GACCCATAACAGAACAGACAACTTTACTCCAAGAAA...TGTCCTCAAGGAAACCACTGGCTTGATATCTTTGTGACTCATGTTGCCTTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | GAACATGGATGTAGCAAATTTAGATCTGGGGCTTTTTACTTCAGACCAATTCCCTCAGTAAGAGTTGAGTaGAAGTGGGCATCCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: EHGCSKFRSGAFYFRPIPSVRVE*KWASLY Trigger: ATACAAGGATGCCCACTTCAACTCAACTCTTACTGA...GGGAATTGGTCTGAAGTAAAAAGCCCCAGATCTAAATTTGCTACATCCATGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | GCAATGTCCAGTAGATTGAATTATGCTTTCAGGAAGGTTCAGAACAATGACTCAGCTCTAAGTGGCAATTaGAATTCATGCTTTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AMSSRLNYAFRKVQNNDSALSGN*NSCFLG Trigger: GCCAAGAAAGCATGAATTCAAATTGCCACTTAGAGC...TGAGTCATTGTTCTGAACCTTCCTGAAAGCATAATTCAATCTACTGGACATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | CTCATTACTAAGGTGGTAGGGAACTCGTTTGAAAGGCAACATGAGTCACAAAGACATGCTTCATGTGAGTaGAATCAAAAGCAAAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LITKVVGNSFERQHESQRHASCE*NQKQKP Trigger: AGGTTTTTGCTTTTGATTCAACTCACATGAAGCATG...TCTTTGTGACTCATGTTGCCTTTCAAACGAGTTCCCTACCACCTTAGTAATGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS-3UTR CAA 90 bp | GCAATGTCCAGTAGATTGAATTATGCTTTCAGGAAGGTTCAGAACAATGACTCAGTGTGGCGGAAAACTTaGTATATGATAACTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AMSSRLNYAFRKVQNNDSVWRKT*YMITPK Trigger: TTTTGGAGTTATCATATACAAAGTTTTCCGCCACAC...TGAGTCATTGTTCTGAACCTTCCTGAAAGCATAATTCAATCTACTGGACATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS GCA 72 bp | TACCCCTGGCTGCAGAAGCAGGCTTCCACACCATTGTaGACTTCGCACTTGGCATTGGGGAGACACGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YPWLQKQASTPL*TSHLALGRHVV Trigger: GACAACGTGTCTCCCCAATGCCAAGTGCGAAGTGCACAATGGTGTGGAAGCCTGCTTCTGCAGCCAGGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
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| CDS CAA 72 bp | GAGTACCCCTGGCTGCAGAAGCAGGCTTCCACACCATaGTGCACTTCGCACTTGGCATTGGGGAGACACGTT | + |
|
Preference number: 6 (lower is better) Translates to: EYPWLQKQASTP*CTSHLALGRHV Trigger: AACGTGTCTCCCCAATGCCAAGTGCGAAGTGCACAATGGTGTGGAAGCCTGCTTCTGCAGCCAGGGGTACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
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| CDS CCA 72 bp | ATGCATGCACTACATGGAGAACCCCAAAGATCCAGGTaGTACCCAGAAGGAAGAGGAGGGCTAGGGCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: MHALHGEPQRSR*YPEGRGGLGHL Trigger: GAGGTGCCCTAGCCCTCCTCTTCCTTCTGGGTACCACCTGGATCTTTGGGGTTCTCCATGTAGTGCATGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS CCA 72 bp | TCTTCACAAATCGTGACGCCATTCCCAGAGTACCCCTaGCTGCAGAAGCAGGCTTCCACACCATTGTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: SSQIVTPFPEYP*LQKQASTPLCT Trigger: AGTGCACAATGGTGTGGAAGCCTGCTTCTGCAGCCAGGGGTACTCTGGGAATGGCGTCACGATTTGTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
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| CDS CAA 90 bp | AGGAGGTGTGGGTGTCGTTTGAGTGTGTCAGCTCACAGCCCTCCGTaGACCAGCTGCCATTGTTCATGGCATCAACTGAGTAGTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RRCGCRLSVSAHSPP*TSCHCSWHQLSSSK Trigger: TTTGGAACTACTCAGTTGATGCCATGAACAATGGCAGCTGGTCAACGGAGGGCTGTGAGCTGACACACTCAAACGACACCCACACCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS TCA 72 bp | AAGACTCGCTGCACTCATCTATATCTTCACAAATCGTaGCGCCATTCCCAGAGTACCCCTGGCTGCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: KTRCTHLYLHKS*RHSQSTPGCRS Trigger: GCTTCTGCAGCCAGGGGTACTCTGGGAATGGCGTCACGATTTGTGAAGATATAGATGAGTGCAGCGAGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
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| CDS TCA 72 bp | GAAGTAGAGGACATCAAAATCGCAAAGTGTGTCAGGTaGCTACAGCGGCAGGAGGTGTGGGTGTCGTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: EVEDIKIAKCVR*LQRQEVWVSFE Trigger: CTCAAACGACACCCACACCTCCTGCCGCTGTAGTCACCTGACACACTTTGCGATTTTGATGTCCTCTACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS GCA 72 bp | TTGAGTGTGTCAGCTCACAGCCCTCCGTTGACCAGCTaGCATTGTTCATGGCATCAACTGAGTAGTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSVSAHSPPLTS*HCSWHQLSSSK Trigger: TTTGGAACTACTCAGTTGATGCCATGAACAATGGCAGCTGGTCAACGGAGGGCTGTGAGCTGACACACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS CAA 90 bp | CTTCCACACCATTGTGCACTTCGCACTTGGCATTGGGGAGACACGTaGTCTTGCTGCAGTTTTGTGTGTAGGAACAATTCAGCAAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPHHCALRTWHWGDT*SCCSFVCRNNSAKW Trigger: CCACTTTGCTGAATTGTTCCTACACACAAAACTGCAGCAAGACAACGTGTCTCCCCAATGCCAAGTGCGAAGTGCACAATGGTGTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
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| CDS GCA 72 bp | CTTCGCACTTGGCATTGGGGAGACACGTTGTCTTGCTaGAGTTTTGTGTGTAGGAACAATTCAGCAAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRTWHWGDTLSC*SFVCRNNSAKW Trigger: CCACTTTGCTGAATTGTTCCTACACACAAAACTGCAGCAAGACAACGTGTCTCCCCAATGCCAAGTGCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
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| CDS GCA 72 bp | ATTGCTGACTGTGAAGAGGTAGGCTGTCACAACAGATaGATGCACTACATGGAGAACCCCAAAGATCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: IADCEEVGCHNR*MHYMENPKDPG Trigger: ACCTGGATCTTTGGGGTTCTCCATGTAGTGCATGCATCTGTTGTGACAGCCTACCTCTTCACAGTCAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS CAA 72 bp | CTTGGCATTGGGGAGACACGTTGTCTTGCTGCAGTTTaGTGTGTAGGAACAATTCAGCAAAGTGGAGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: LGIGETRCLAAV*CVGTIQQSGET Trigger: GGTTTCTCCACTTTGCTGAATTGTTCCTACACACAAAACTGCAGCAAGACAACGTGTCTCCCCAATGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
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| CDS CAA 72 bp | CATTGTGCACTTCGCACTTGGCATTGGGGAGACACGTaGTCTTGCTGCAGTTTTGTGTGTAGGAACAATTCA | + |
|
Preference number: 6 (lower is better) Translates to: HCALRTWHWGDT*SCCSFVCRNNS Trigger: TGAATTGTTCCTACACACAAAACTGCAGCAAGACAACGTGTCTCCCCAATGCCAAGTGCGAAGTGCACAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046977.12 ENSMUST00000196970.3 |
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| CDS CAA 90 bp | TTTAAGGAAAACCAGACAGTAAGAGTTGAGTTGAAGTGGGCATCCTaGTATGAAGTGGTGCTGTTCGGGTGGCCTAGTAGTGAGGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: FKENQTVRVELKWAS*YEVVLFGWPSSEDD Trigger: ATCATCCTCACTACTAGGCCACCCGAACAGCACCACTTCATACAAGGATGCCCACTTCAACTCAACTCTTACTGTCTGGTTTTCCTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| CDS CAA 90 bp | TTCCCCAAATTCCTATTTAAGGAAAACCAGACAGTAAGAGTTGAGTaGAAGTGGGCATCCTTGTATGAAGTGGTGCTGTTCGGGTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: FPKFLFKENQTVRVE*KWASLYEVVLFGWP Trigger: AGGCCACCCGAACAGCACCACTTCATACAAGGATGCCCACTTCAACTCAACTCTTACTGTCTGGTTTTCCTTAAATAGGAATTTGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| CDS CAA 72 bp | GATGGCGAGGCAGATCAGGGAGATGATTATCCCGAGTaGAGTGATCCTCGTCAGGATATTATAATCCTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: DGEADQGDDYPE*SDPRQDIIILN Trigger: ATTAAGGATTATAATATCCTGACGAGGATCACTCAACTCGGGATAATCATCTCCCTGATCTGCCTCGCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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| CDS CAA 72 bp | TTCCTATTTAAGGAAAACCAGACAGTAAGAGTTGAGTaGAAGTGGGCATCCTTGTATGAAGTGGTGCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLFKENQTVRVE*KWASLYEVVLF Trigger: GAACAGCACCACTTCATACAAGGATGCCCACTTCAACTCAACTCTTACTGTCTGGTTTTCCTTAAATAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129283.2 |
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| CDS TCA 72 bp | CTAAAGATGCTGAGAATCCAACAACTACAGCTGGGCTaGGATAGCCAAAGATATAAAAGTTCTTGTGTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LKMLRIQQLQLG*DSQRYKSSCVK Trigger: TTTTACACAAGAACTTTTATATCTTTGGCTATCTCAGCCCAGCTGTAGTTGTTGGATTCTCAGCATCTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046977.12 |
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