RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRL3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037605

Ensembl transcript IDs: ENSMUST00000036068.15, ENSMUST00000072521.11, ENSMUST00000117253.8, ENSMUST00000117407.8, ENSMUST00000117985.8, ENSMUST00000118034.8, ENSMUST00000118078.8, ENSMUST00000118442.8, ENSMUST00000119385.8, ENSMUST00000119788.8, ENSMUST00000120128.8, ENSMUST00000120144.8, ENSMUST00000120292.8, ENSMUST00000120445.8, ENSMUST00000120673.8, ENSMUST00000121641.8, ENSMUST00000121707.8, ENSMUST00000122037.8, ENSMUST00000122356.8, ENSMUST00000124117.2, ENSMUST00000132375.8

Found 2519 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTCGGCGTCACCACCCTTGGCCGCTGCGGCTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCA +
Preference number: 1 (lower is better)
Translates to: LRRHHPWPLRLRSGC*WSHCLQRARRPGLA
Trigger: TGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGTGACGCCGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR GCA 90 bp CATCTTCGGCGTCACCACCCTTGGCCGCTGCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: HLRRHHPWPLRLRSG*WWSHCLQRARRPGL
Trigger: CAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGTGACGCCGAAGATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR GCA 90 bp CTTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTaGAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGA +
Preference number: 1 (lower is better)
Translates to: LGRCGFGLGAGGHTV*SGHAGQGWHAGVQR
Trigger: TCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 90 bp GGGCAGGTGTGTGGTGACGTCATCCAGCACCTCTACCGCGGGGGATaGCGTGCTGGTACTGCGGTTTCTTCTGCCCGGCAAGGATGCGGT +
Preference number: 1 (lower is better)
Translates to: GQVCGDVIQHLYRGG*RAGTAVSSARQGCG
Trigger: ACCGCATCCTTGCCGGGCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCGCGGTAGAGGTGCTGGATGACGTCACCACACACCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp TGCCCGGCAAGGATGCGGTGGTACTCCTGCCTATGTTCCAGGTTGTaGTCCGGAGGGTGGTGCTGGTGGTCGTGCTTCCCATACCCAGGG +
Preference number: 1 (lower is better)
Translates to: CPARMRWYSCLCSRL*SGGWCWWSCFPYPG
Trigger: CCCTGGGTATGGGAAGCACGACCACCAGCACCACCCTCCGGACCACAACCTGGAACATAGGCAGGAGTACCACCGCATCCTTGCCGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp GGGGGATGGCGTGCTGGTACTGCGGTTTCTTCTGCCCGGCAAGGATaGGGTGGTACTCCTGCCTATGTTCCAGGTTGTGGTCCGGAGGGT +
Preference number: 1 (lower is better)
Translates to: GGWRAGTAVSSARQG*GGTPAYVPGCGPEG
Trigger: ACCCTCCGGACCACAACCTGGAACATAGGCAGGAGTACCACCGCATCCTTGCCGGGCAGAAGAAACCGCAGTACCAGCACGCCATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp GCACCTCTACCGCGGGGGATGGCGTGCTGGTACTGCGGTTTCTTCTaGCCGGCAAGGATGCGGTGGTACTCCTGCCTATGTTCCAGGTTG +
Preference number: 1 (lower is better)
Translates to: APLPRGMACWYCGFF*PARMRWYSCLCSRL
Trigger: CAACCTGGAACATAGGCAGGAGTACCACCGCATCCTTGCCGGGCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCGCGGTAGAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp TCTCGGGCTTCCACAGCCTCGCAGCTCTCTTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGGTGTGTGGTGACGTCATCCAGCACC +
Preference number: 1 (lower is better)
Translates to: SRASTASQLSSIAGI*EAAEGRCVVTSSST
Trigger: GGTGCTGGATGACGTCACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGCTGCGAGGCTGTGGAAGCCCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp TGGTACTGCGGTTTCTTCTGCCCGGCAAGGATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGGTCCGGAGGGTGGTGCTGGTGGTCG +
Preference number: 1 (lower is better)
Translates to: WYCGFFCPARMRWYS*LCSRLWSGGWCWWS
Trigger: CGACCACCAGCACCACCCTCCGGACCACAACCTGGAACATAGGCAGGAGTACCACCGCATCCTTGCCGGGCAGAAGAAACCGCAGTACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp TTCCACAGCCTCGCAGCTCTCTTCCATAGCTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGTGACGTCATCCAGCACCTCTACCGC +
Preference number: 1 (lower is better)
Translates to: FHSLAALFHSWDLGG*RGQVCGDVIQHLYR
Trigger: GCGGTAGAGGTGCTGGATGACGTCACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGCTGCGAGGCTGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp GGGGGAACCGCCTCCTGCTGTAATGGTGTGGCTGGTGGTTATCCGTaGAGTAAACCCTCGGGGGCAGCAAGGGAGCATCGGATTCCTCGT +
Preference number: 1 (lower is better)
Translates to: GGTASCCNGVAGGYP*SKPSGAAREHRIPR
Trigger: ACGAGGAATCCGATGCTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 90 bp ATGGCGTGCTGGTACTGCGGTTTCTTCTGCCCGGCAAGGATGCGGTaGTACTCCTGCCTATGTTCCAGGTTGTGGTCCGGAGGGTGGTGC +
Preference number: 1 (lower is better)
Translates to: MACWYCGFFCPARMR*YSCLCSRLWSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCAGGAGTACCACCGCATCCTTGCCGGGCAGAAGAAACCGCAGTACCAGCACGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp GCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTC +
Preference number: 1 (lower is better)
Translates to: ARAGMLVYRESLCGD*RSSVCSSVSRGKKL
Trigger: GAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR GCA 90 bp CATGCTTTTGTAGTAAACATCTTCGGCGTCACCACCCTTGGCCGCTaGGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGG +
Preference number: 1 (lower is better)
Translates to: HAFVVNIFGVTTLGR*GFGLGAGGHTVCSG
Trigger: CCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGTGACGCCGAAGATGTTTACTACAAAAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR TCA 90 bp TCAAGCTGCGGGCTGCGCTGTCTTTTCCCCCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGCCAACCAGCTGGTCCATGGCACGGA +
Preference number: 1 (lower is better)
Translates to: SSCGLRCLFPLVSNS*AGHPRGQPAGPWHG
Trigger: TCCGTGCCATGGACCAGCTGGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGCGCAGCCCGCAGCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp AGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTTCGGCGTCACCACCCTTGGCCGCTG +
Preference number: 1 (lower is better)
Translates to: RRAAGARGFWSPGLA*FCSKHLRRHHPWPL
Trigger: CAGCGGCCAAGGGTGGTGACGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGCTTTTGTAGTAAACATCTTCGGCGT +
Preference number: 1 (lower is better)
Translates to: RAPAGSRRAAGARGF*SPGLACFCSKHLRR
Trigger: ACGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 90 bp CATGATTTCTCGGGCTTCCACAGCCTCGCAGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGAGGGCAGGTGTGTGGTGACGTCATC +
Preference number: 1 (lower is better)
Translates to: HDFSGFHSLAALFHS*DLGGCRGQVCGDVI
Trigger: GATGACGTCACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGCTGCGAGGCTGTGGAAGCCCGAGAAATCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR TCA 90 bp CTGTTCCGTAGCTCCTGTAGTCGACGGCCGCAGAAACGGCCACGATaGGCGCGGGCATCCCATAGCCGACCAGATAAAAGTACTTCCTAC +
Preference number: 1 (lower is better)
Translates to: LFRSSCSRRPQKRPR*ARASHSRPDKSTSY
Trigger: GTAGGAAGTACTTTTATCTGGTCGGCTATGGGATGCCCGCGCTCATCGTGGCCGTTTCTGCGGCCGTCGACTACAGGAGCTACGGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp GGTTTGGCATGCTTTTGTAGTAAACATCTTCGGCGTCACCACCCTTaGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTG +
Preference number: 1 (lower is better)
Translates to: GLACFCSKHLRRHHP*PLRLRSGCWWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGTGACGCCGAAGATGTTTACTACAAAAGCATGCCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR TCA 90 bp GCGCTCTCCTCCACAGTGTCAAGCAACATGGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCTCTCCAGGCATTCAAAGCTTGTGGC +
Preference number: 1 (lower is better)
Translates to: ALSSTVSSNMVAARS*SLVVRSLQAFKACG
Trigger: GCCACAAGCTTTGAATGCCTGGAGAGACCTGACGACAAGTGATCAACTGCGTGCGGCCACCATGTTGCTTGACACTGTGGAGGAGAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp GTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAGGTTTaGCATGCTTTTGTAGTAAACATCTTCGGCGTCACCACCCTTGGC +
Preference number: 1 (lower is better)
Translates to: VVGVQRVHVVSGAQV*HAFVVNIFGVTTLG
Trigger: GCCAAGGGTGGTGACGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 90 bp CAGCTAACACGAAAGCGCTCTCCTCCACAGTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCACTTGTCGTCAGGTCTCTCCAGGCAT +
Preference number: 1 (lower is better)
Translates to: QLTRKRSPPQCQATW*PHAVDHLSSGLSRH
Trigger: ATGCCTGGAGAGACCTGACGACAAGTGATCAACTGCGTGCGGCCACCATGTTGCTTGACACTGTGGAGGAGAGCGCTTTCGTGTTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp TATCAGCTAACACGAAAGCGCTCTCCTCCACAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGATCACTTGTCGTCAGGTCTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: YQLTRKRSPPQCQAT*WPHAVDHLSSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTGCGGCCACCATGTTGCTTGACACTGTGGAGGAGAGCGCTTTCGTGTTAGCTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR TCA 90 bp CATCCAAGAGGCCAACCAGCTGGTCCATGGCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGTGATTTCTTGTCTGTTCTGCTAGCT +
Preference number: 1 (lower is better)
Translates to: HPRGQPAGPWHGQSR*CPQRSSDFLSVLLA
Trigger: AGCTAGCAGAACAGACAAGAAATCACTTGAACGCTGGGGACATCACCTACTCTGTCCGTGCCATGGACCAGCTGGTTGGCCTCTTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR TCA 90 bp GCCTGTGGAGTACCGTCCTGGAGTTCGAGAACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGTGCTTTTCCCACTACAGCAATGCGT +
Preference number: 1 (lower is better)
Translates to: ACGVPSWSSRTRCFP*ANRTLRAFPTTAMR
Trigger: ACGCATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGTTCTCGAACTCCAGGACGGTACTCCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp AGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTaGCTAAGTTGTTCACCAGTTTGTTCATCATATTCCGGTTCTGTT +
Preference number: 1 (lower is better)
Translates to: RTRRHPGRWRHLHSR*LSCSPVCSSYSGSV
Trigger: AACAGAACCGGAATATGATGAACAAACTGGTGAACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTaGCATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCG +
Preference number: 1 (lower is better)
Translates to: LSTQNGPPGVSSPVG*HPRVIFYRLVTKCA
Trigger: CGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR GCA 90 bp ACCCCTTCTAGAAACATCCAGGTGAAGGCCGCCAAGAAGAAGAAATaGAAAAGAGCCGCGAACACTGCACAGGCAATTGGTTGGTCGGTT +
Preference number: 1 (lower is better)
Translates to: TPSRNIQVKAAKKKK*KRAANTAQAIGWSV
Trigger: AACCGACCAACCAATTGCCTGTGCAGTGTTCGCGGCTCTTTTGCATTTCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAGAAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp TTCCCTGAGCCAATCGAACTCTCCGTGCTTTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCATACTCTTTCCGTACCTTCTTCTGT +
Preference number: 1 (lower is better)
Translates to: FPEPIELSVLFPLQQ*VRRHFPYSFRTFFC
Trigger: ACAGAAGAAGGTACGGAAAGAGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTGGCTCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp GAGTTCGAGAACCAGATGTTTTCCCTGAGCCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAATGCGTGCGGAGGCATTTCCCATACT +
Preference number: 1 (lower is better)
Translates to: EFENQMFSLSQSNSP*FSHYSNACGGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGTTCTCGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp TCTTTCGAGAACAGCATCAGATGTCGGAGTACACACGATGACCACTaGTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTG +
Preference number: 1 (lower is better)
Translates to: SFENSIRCRSTHDDH*FYRLRMVHQVLAVL
Trigger: CAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACTCCGACATCTGATGCTGTTCTCGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR GCA 90 bp CTGAGCCAATCGAACTCTCCGTGCTTTTCCCACTACAGCAATGCGTaGGGAGGCATTTCCCATACTCTTTCCGTACCTTCTTCTGTAGAA +
Preference number: 1 (lower is better)
Translates to: LSQSNSPCFSHYSNA*GGISHTLSVPSSVE
Trigger: TTCTACAGAAGAAGGTACGGAAAGAGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTaGTTCTATGGCTGGGCAGCACTCCAATCTAGATGCAGCATTGTT +
Preference number: 1 (lower is better)
Translates to: QVASDHESLCDTVQL*FYGWAALQSRCSIV
Trigger: AACAATGCTGCATCTAGATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR TCA 90 bp TGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTTTCTCTAGGGCGGTCTCGTTGTGGT +
Preference number: 1 (lower is better)
Translates to: WSARGCSGMKGYSWK*VPLGSFSLGRSRCG
Trigger: ACCACAACGAGACCGCCCTAGAGAAAAAGATCCTAAAGGAACTCACTTCCAACTATATCCCTTCATACCTGAACAACCACGAGCGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR TCA 90 bp AATTGGTGGAGAGATGTAGGAGACTTGTCCATGATGTACCGGCCCTaGTCTACTATCCAGAGGCCCGAAGTCCAAAGAGTATTTCACAAC +
Preference number: 1 (lower is better)
Translates to: NWWRDVGDLSMMYRP*STIQRPEVQRVFHN
Trigger: GTTGTGAAATACTCTTTGGACTTCGGGCCTCTGGATAGTAGATCAGGGCCGGTACATCATGGACAAGTCTCCTACATCTCTCCACCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp CAGAAGAAGATCGTGGACTGCATCGCTGTGCTTAACTTCCACATGTaGCATCAATACTGCAAAGTTGGTGAGGTGGTTACAGGAGCATGT +
Preference number: 1 (lower is better)
Translates to: QKKIVDCIAVLNFHM*HQYCKVGEVVTGAC
Trigger: ACATGCTCCTGTAACCACCTCACCAACTTTGCAGTATTGATGGCACATGTGGAAGTTAAGCACAGCGATGCAGTCCACGATCTTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp AAATCCAGTGCCATCCACTCTGTGAGGGAGCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTCATCTTTGGACGAATACTCTGTCAG +
Preference number: 1 (lower is better)
Translates to: KSSAIHSVRELVGSC*PSSNEVIFGRILCQ
Trigger: CTGACAGAGTATTCGTCCAAAGATGACTTCATTGCTGGAAGGCCAACAACTACCTACAAGCTCCCTCACAGAGTGGATGGCACTGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp TTATACAGGACAAAAGCCACTCTAATCTCTCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAGAGCTGGATGGTACTTCCGTGGCCC +
Preference number: 1 (lower is better)
Translates to: LYRTKATLISPFRPF*FNVFAESWMVLPWP
Trigger: GGGCCACGGAAGTACCATCCAGCTCTCAGCAAACACATTAAAGCAAAATGGCCGGAATGGAGAGATTAGAGTGGCTTTTGTCCTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp TGTCCCCAGCGTTCAAGTGATTTCTTGTCTGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTTCTCCGGATTTCAGCTTCTGTGTTA +
Preference number: 1 (lower is better)
Translates to: CPQRSSDFLSVLLAL*QYWQLFLRISASVL
Trigger: TAACACAGAAGCTGAAATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAACAGACAAGAAATCACTTGAACGCTGGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp CTAAGTTGTTCACCAGTTTGTTCATCATATTCCGGTTCTGTTCGCTaGAGCGCTCGTGGTTGTTCAGGTATGAAGGGATATAGTTGGAAG +
Preference number: 1 (lower is better)
Translates to: LSCSPVCSSYSGSVR*SARGCSGMKGYSWK
Trigger: CTTCCAACTATATCCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGATGAACAAACTGGTGAACAACTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 90 bp ATCTCTCCATTCCGGCCATTTTGCTTTAATGTGTTTGCTGAGAGCTaGATGGTACTTCCGTGGCCCATGTTCTCTGGGAATTTTAGATCT +
Preference number: 1 (lower is better)
Translates to: ISPFRPFCFNVFAES*MVLPWPMFSGNFRS
Trigger: AGATCTAAAATTCCCAGAGAACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAAACACATTAAAGCAAAATGGCCGGAATGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp CCATTTTGCTTTAATGTGTTTGCTGAGAGCTGGATGGTACTTCCGTaGCCCATGTTCTCTGGGAATTTTAGATCTTCTAGGTTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: PFCFNVFAESWMVLP*PMFSGNFRSSRFPS
Trigger: GGAAGGAAACCTAGAAGATCTAAAATTCCCAGAGAACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAAACACATTAAAGCAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp CACCTCTTAGCTTCTAGAATCATAGCTACTGCCTTGGTGATGAACTaGTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAA +
Preference number: 1 (lower is better)
Translates to: HLLASRIIATALVMN*LPNMLCNTTYVPRK
Trigger: TTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAAGGCAGTAGCTATGATTCTAGAAGCTAAGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR GCA 90 bp TGTACTGGTAAGAGTTGGGAAAGGGTACATCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAATGTAGTCAATCTTATTACCGGTGG +
Preference number: 1 (lower is better)
Translates to: CTGKSWERVHPPSYP*FGQCCKCSQSYYRW
Trigger: CCACCGGTAATAAGATTGACTACATTTACAACACTGACCAAAGCAAGGATAGCTTGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp GACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTaGGCAGCACTCCAATCTAGATGCAGCATTGTTACTAATTTCAAA +
Preference number: 1 (lower is better)
Translates to: DHESLCDTVQLCFYG*AALQSRCSIVTNFK
Trigger: TTTGAAATTAGTAACAATGCTGCATCTAGATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR TCA 90 bp TGCTCAGTCTTGCAACTTCTAACTGAATATTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAAGGTTATCAGCTAACACGAAAGCGC +
Preference number: 1 (lower is better)
Translates to: CSVLQLLTEYCLYSP*QCRSSKGYQLTRKR
Trigger: GCGCTTTCGTGTTAGCTGATAACCTTTTGAAGACCGACATTGTCAGGGAGAATACAGACAATATTCAGTTAGAAGTTGCAAGACTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR TCA 90 bp TTATTTATTGCTGCTGTAATAACAGGGGAATTGACGATAACCGAGTaGTTTGTGGACATAGCTTCTGTGCCCAACTTCATACTGGCATTC +
Preference number: 1 (lower is better)
Translates to: LFIAAVITGELTITE*FVDIASVPNFILAF
Trigger: GAATGCCAGTATGAAGTTGGGCACAGAAGCTATGTCCACAAATCACTCGGTTATCGTCAATTCCCCTGTTATTACAGCAGCAATAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 90 bp ATCATAGCTACTGCCTTGGTGATGAACTGCTTGCCAAATATGCTTTaGAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTT +
Preference number: 1 (lower is better)
Translates to: IIATALVMNCLPNML*NTTYVPRKHKICPV
Trigger: AACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAAGGCAGTAGCTATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR TCA 90 bp ATATTGTCAAGACAGCCTGATTCAGGTTTCAGTATGGCAGTATGGTaGAACATTTTGTATAAAGCAATCCCAAGGAAGATGACATTCAGC +
Preference number: 1 (lower is better)
Translates to: ILSRQPDSGFSMAVW*NILYKAIPRKMTFS
Trigger: GCTGAATGTCATCTTCCTTGGGATTGCTTTATACAAAATGTTTCACCATACTGCCATACTGAAACCTGAATCAGGCTGTCTTGACAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 90 bp AAAGAAACTTTCTTCTTTGCCACTACATTAACAGGACTCAAATTCTaGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTA +
Preference number: 1 (lower is better)
Translates to: KETFFFATTLTGLKF*RNRKQTICAMLVSV
Trigger: TACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAATTTGAGTCCTGTTAATGTAGTGGCAAAGAAGAAAGTTTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 2 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWRTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 2 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 2 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: PARAGMLVYRESLCGDCRGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCATCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 2 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAACCACCCTTGGCCGCTaGGGCTTCGGTCTGGGTGCT +
Preference number: 2 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPTTLGR*GFGLGA
Trigger: AGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGT...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGRTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 2 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRARHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCACCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 2 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 2 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGATCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 2 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCCTGAGGGGAAAGGACTaGGAAAGATTGGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGLRGKD*ERLGHR
Trigger: CCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAG...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 2 (lower is better)
Translates to: PARAGMLVYRESLCGDCRRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTG +
Preference number: 2 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPAAASV*VLVVTL
Trigger: CAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGC...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 2 (lower is better)
Translates to: SHCLQRARRPGLACWCTERIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: HCLQRARRPGLACWCTESASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: SHCLQRARRPGLACWCTEASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 2 (lower is better)
Translates to: SHCLQRARRPGLACWCTESLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: PARAGMLVYRESLCGDCRRTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 2 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CAA 90 bp TTCTGCCCGGCAAGGATGCGGTGGTACTCCTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGCTGGTGGTCGTGCTTCCCATACCCA +
Preference number: 2 (lower is better)
Translates to: FCPARMRWYSCLCSR*WSGGWCWWSCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCCGGACCACAACCTGGAACATAGGCAGGAGTACCACCGCATCCTTGCCGGGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CAA 90 bp TTCTCGGGCTTCCACAGCCTCGCAGCTCTCTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAGGTGTGTGGTGACGTCATCCAGCAC +
Preference number: 2 (lower is better)
Translates to: FSGFHSLAALFHSWD*GGCRGQVCGDVIQH
Trigger: GTGCTGGATGACGTCACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGCTGCGAGGCTGTGGAAGCCCGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCACTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 2 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTRLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 2 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 2 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGAATGAAGTCTCCATCTaGGGGGAAAGGACTGGGAAA +
Preference number: 2 (lower is better)
Translates to: PARAGMLVYRESLCGDCRNEVSI*GERTGK
Trigger: TTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATT...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTRVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 2 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACACACGATGACCACTaGTTCTATCGACTCAGAATG +
Preference number: 2 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGTHDDH*FYRLRM
Trigger: CATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGT...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 2 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 2 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 2 (lower is better)
Translates to: PLRRGPIFVRRNYESVAARLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCATCAACAAGGCCACAATaGGCGCCATTTTCTTCTTAT +
Preference number: 2 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPSTRPQ*APFSSY
Trigger: ATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGA...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTCTATTCCCGCTGTGGTaGACTCAGGTTGCGAGTGAC +
Preference number: 2 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTLFPLW*TQVASD
Trigger: GTCACTCGCAACCTGAGTTCACCACAGCGGGAATAG...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGACGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 2 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 2 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAARPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: CTESPCAVTAGLLCARRLGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 2 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYRLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTCTGAGGGGAAAGGACTaGGAAAGATTGGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTLRGKD*ERLGHR
Trigger: CCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAG...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 2 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GAGGGTGGTGCTGGTGGTCGTGCTTCCCATACCCAGGGATCCTGTGGTAGAAATCTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: EGGAGGRASHTQGSCGRNLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...ATTTCTACCACAGGATCCCTGGGTATGGGAAGCACGACCACCAGCACCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 2 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GAGGGTGGTGCTGGTGGTCGTGCTTCCCATACCCAGGGATCCTGTGGTAGAAATGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 2 (lower is better)
Translates to: EGGAGGRASHTQGSCGRNGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...ATTTCTACCACAGGATCCCTGGGTATGGGAAGCACGACCACCAGCACCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CCTGGTGTCAAATTCCTGAGCTGGACATCCAAGAGGCCAACCAGCTGGTCCATGGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 2 (lower is better)
Translates to: PGVKFLSWTSKRPTSWSMGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...CATGGACCAGCTGGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CAA 90 bp GGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAACATCTTCGGCGTCACCACCCTTGG +
Preference number: 2 (lower is better)
Translates to: GSRRAAGARGFWSPG*ACFCSKHLRRHHPW
Trigger: CCAAGGGTGGTGACGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 2 (lower is better)
Translates to: PLRRGPIFVRRNYESVAARIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 2 (lower is better)
Translates to: NGVAGGYPWSKPSGAARELSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 2 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGGTGCAGGTGCCCACGTaGGGGTCAGACTGCTCAGTC +
Preference number: 2 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGVQVPT*GSDCSV
Trigger: GACTGAGCAGTCTGACCCCCACGTGGGCACCTGCAC...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 2 (lower is better)
Translates to: PLRRGPIFVRRNYESVAASLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 2 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CCTGGTGTCAAATTCCTGAGCTGGACATCCAAGAGGCCAACCAGCTGGTCCATGCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 2 (lower is better)
Translates to: PGVKFLSWTSKRPTSWSMPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...CATGGACCAGCTGGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATTGCAGCGGGTGCACGTaGTTTCTGGAGCCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYCSGCT*FLEPRF
Trigger: AAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCA...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TACCTGCCCCTGTCTGGTCTTAAACCACATGATTTCTCGGGCTTCCACAGCCTCGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 2 (lower is better)
Translates to: YLPLSGLKPHDFSGFHSLGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...GAGGCTGTGGAAGCCCGAGAAATCATGTGGTTTAAGACCAGACAGGGGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGATCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 2 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CAA 90 bp AGCGCTCTCCTCCACAGTGTCAAGCAACATGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTCTCTCCAGGCATTCAAAGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: SALLHSVKQHGGRTQ*ITCRQVSPGIQSLW
Trigger: CCACAAGCTTTGAATGCCTGGAGAGACCTGACGACAAGTGATCAACTGCGTGCGGCCACCATGTTGCTTGACACTGTGGAGGAGAGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 2 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: CTESPCAVTAGLLCARRLASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYRTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMRTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TACCTGCCCCTGTCTGGTCTTAAACCACATGATTTCTCGGGCTTCCACAGCCTCCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 2 (lower is better)
Translates to: YLPLSGLKPHDFSGFHSLRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...GAGGCTGTGGAAGCCCGAGAAATCATGTGGTTTAAGACCAGACAGGGGCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 2 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CAA 90 bp CCTCCACAGTGTCAAGCAACATGGTGGCCGCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGGCATTCAAAGCTTGTGGCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: PPQCQATWWPHAVDH*SSGLSRHSKLVAEG
Trigger: TCCTTCAGCCACAAGCTTTGAATGCCTGGAGAGACCTGACGACAAGTGATCAACTGCGTGCGGCCACCATGTTGCTTGACACTGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCTATTCCCGCTGTGGTaGACTCAGGTTGCGAGTGAC +
Preference number: 2 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVLFPLW*TQVASD
Trigger: GTCACTCGCAACCTGAGTTCACCACAGCGGGAATAG...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGRVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 2 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAACTGCTTGCCAAATATaGTTTGCAATACAACATATG +
Preference number: 2 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPTACQI*FAIQHM
Trigger: CATATGTTGTATTGCAAAGCATATTTGGCAAGCAGT...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GCCAACATACTTTGTCTGTTCCGTAGCTCCTGTAGTCGACGGCCGCAGAAACGGTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 2 (lower is better)
Translates to: ANILCLFRSSCSRRPQKRYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...CCGTTTCTGCGGCCGTCGACTACAGGAGCTACGGAACAGACAAAGTATGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGGTTAGCTTTCTCCCCTaGGCTGACCTAAAAATTCAA +
Preference number: 2 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLVSFLP*ADLKIQ
Trigger: TTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAAC...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAGTTAGCTTTCTCCCCTaGGCTGACCTAAAAATTCAA +
Preference number: 2 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPVSFLP*ADLKIQ
Trigger: TTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAAC...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGACTGAGGGGAAAGGACTaGGAAAGATTGGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGLRGKD*ERLGHR
Trigger: CCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAG...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGTCAGCTCTGCTTCTATaGCTGGGCAGCACTCCAATC +
Preference number: 2 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMSALLL*LGSTPI
Trigger: GATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGA...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: DAASSRTMASSSLPLPKLVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...CAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLRVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGACTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCACACACGATGACCACTaGTTCTATCGACTCAGAATG +
Preference number: 2 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPTHDDH*FYRLRM
Trigger: CATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGT...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCACACACGATGACCACTaGTTCTATCGACTCAGAATG +
Preference number: 2 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPTHDDH*FYRLRM
Trigger: CATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGT...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLERTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCTGAGGGGAAAGGACTaGGAAAGATTGGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLRGKD*ERLGHR
Trigger: CCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCTCAGCTCTGCTTCTATaGCTGGGCAGCACTCCAATC +
Preference number: 2 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTSALLL*LGSTPI
Trigger: GATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGA...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 2 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTACTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CAA 90 bp ACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTG +
Preference number: 2 (lower is better)
Translates to: TMASSSLPLPKLFTS*FIIFRFCSLERSWL
Trigger: CAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGATGAACAAACTGGTGAACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CAA 90 bp GCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTaGTTCACCAGTTTGTTCATCATATTCCGGTTCTGTTCGCTGGAG +
Preference number: 2 (lower is better)
Translates to: ASSRTMASSSLPLPK*FTSLFIIFRFCSLE
Trigger: CTCCAGCGAACAGAACCGGAATATGATGAACAAACTGGTGAACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVRVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGACCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 2 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCCTCTGCTTCTATGGCTaGGCAGCACTCCAATCTAGA +
Preference number: 2 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTLCFYG*AALQSR
Trigger: TCTAGATTGGAGTGCTGCCCAGCCATAGAAGCAGAG...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCAATGAAGTCTCCATCTaGGGGGAAAGGACTGGGAAA +
Preference number: 2 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTNEVSI*GERTGK
Trigger: TTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATT...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCAATGAAGTCTCCATCTaGGGGGAAAGGACTGGGAAA +
Preference number: 2 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVNEVSI*GERTGK
Trigger: TTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATT...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: ELRLRVTMNRYVILFSSARTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVRTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 17 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CTTTGCTACCTGCCCCTGTCTGGTCTTAAACCACATGATTTCTCGGGCTTCCACCTCTGCTTCTATGGCTaGGCAGCACTCCAATCTAGA +
Preference number: 2 (lower is better)
Translates to: LCYLPLSGLKPHDFSGFHLCFYG*AALQSR
Trigger: TCTAGATTGGAGTGCTGCCCAGCCATAGAAGCAGAG...GTGGAAGCCCGAGAAATCATGTGGTTTAAGACCAGACAGGGGCAGGTAGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACTCAGCTCTGCTTCTATaGCTGGGCAGCACTCCAATC +
Preference number: 2 (lower is better)
Translates to: TMNRYVILFSSASMAGQHSALLL*LGSTPI
Trigger: GATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGA...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 2 (lower is better)
Translates to: QVASDHESLCDTVQLCFYPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 2 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp TCTTGTTGGTTGTCAGGAGTCGACAGCCTTGTGTTGACCAATAACCTGTCATTGCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 2 (lower is better)
Translates to: SCWLSGVDSLVLTNNLSLRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...CAATGACAGGTTATTGGTCAACACAAGGCTGTCGACTCCTGACAACCAACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTACCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: CTESPCAVTAGLLCARRLPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 2 (lower is better)
Translates to: PLRRGPIFVRRNYESVAASPGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTGGGCT...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: QVASDHESLCDTVQLCFYRTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTCAGCTCTGCTTCTATaGCTGGGCAGCACTCCAATC +
Preference number: 2 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVSALLL*LGSTPI
Trigger: GATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATATCAGCTCTGCTTCTATaGCTGGGCAGCACTCCAATC +
Preference number: 2 (lower is better)
Translates to: YSRCGELRLRVTMNRYVISALLL*LGSTPI
Trigger: GATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGA...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACGTGCAGGTGCCCACGTaGGGGTCAGACTGCTCAGTC +
Preference number: 2 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYVQVPT*GSDCSV
Trigger: GACTGAGCAGTCTGACCCCCACGTGGGCACCTGCAC...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCCTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGTGCAGCGGGTGCACGTaGTTTCTGGAGCCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRCSGCT*FLEPRF
Trigger: AAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCA...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGACATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 2 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAAATGAAGTCTCCATCTaGGGGGAAAGGACTGGGAAA +
Preference number: 2 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLNEVSI*GERTGK
Trigger: TTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATT...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGCTATTCCCGCTGTGGTaGACTCAGGTTGCGAGTGAC +
Preference number: 2 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRLFPLW*TQVASD
Trigger: GTCACTCGCAACCTGAGTTCACCACAGCGGGAATAG...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGATACTGTTCAGCTCTaGTTCTATGGCTGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVDTVQL*FYGWAA
Trigger: TGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCAGAAAGCAGACTATATaGGCAATGCTAGTATCTGTA +
Preference number: 2 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSRKQTI*AMLVSV
Trigger: TACAGATACTAGCATTGCGCATATAGTCTGCTTTCT...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRRTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGCTGAGGGGAAAGGACTaGGAAAGATTGGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRLRGKD*ERLGHR
Trigger: CCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAG...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR CAA 90 bp TTTGCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTaGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: FACVSHSYSRCGELR*RVTMNRYVILFSSA
Trigger: AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGTCAACAAGGCCACAATaGGCGCCATTTTCTTCTTAT +
Preference number: 2 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGSTRPQ*APFSSY
Trigger: ATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGA...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCACTGGTAGACAAACTTaGAAGACTAACACAAAAGAA +
Preference number: 2 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSTGRQT*KTNTKE
Trigger: TTCTTTTGTGTTAGTCTTGCAAGTTTGTCTACCAGT...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAACCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACGTTAGCTTTCTCCCCTaGGCTGACCTAAAAATTCAA +
Preference number: 2 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHVSFLP*ADLKIQ
Trigger: TTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAAC...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATCTGAGGGGAAAGGACTaGGAAAGATTGGGGCACAGG +
Preference number: 2 (lower is better)
Translates to: GQTAQSALLTPMEYSISHLRGKD*ERLGHR
Trigger: CCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAG...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGCAATCAGTTGTTTATTaGTCGGCAAACAAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMQSVVY*SANKFH
Trigger: GTGAAACTTGTTTGCCGACCAATAAACAACTGATTG...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 2 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAACGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 2 (lower is better)
Translates to: RNRKQTICAMLVSVHYIERSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTG +
Preference number: 2 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFAAASV*VLVVTL
Trigger: CAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGC...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 2 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 2 (lower is better)
Translates to: ERHFLLISFINIMKSPSESLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 2 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLSPGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTGGGCT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAATGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACAGGACTGGGAAAGATTaGGGCACAGGAGGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYRTGKD*GTGGAQ
Trigger: CTGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCT...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTCTCTGCTTCTATGGCTaGGCAGCACTCCAATCTAGA +
Preference number: 2 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSLCFYG*AALQSR
Trigger: TCTAGATTGGAGTGCTGCCCAGCCATAGAAGCAGAG...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TCTTGTTGGTTGTCAGGAGTCGACAGCCTTGTGTTGACCAATAACCTGTCATTGGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 2 (lower is better)
Translates to: SCWLSGVDSLVLTNNLSLALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...CAATGACAGGTTATTGGTCAACACAAGGCTGTCGACTCCTGACAACCAACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 2 (lower is better)
Translates to: GQTAQSALLTPMEYSISHQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CAA 90 bp CTGGTAAGAGTTGGGAAAGGGTACATCCACCAAGCTATCCTTGCTTaGGTCAGTGTTGTAAATGTAGTCAATCTTATTACCGGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LVRVGKGYIHQAILA*VSVVNVVNLITGGL
Trigger: GAGGCCACCGGTAATAAGATTGACTACATTTACAACACTGACCAAAGCAAGGATAGCTTGGTGGATGTACCCTTTCCCAACTCTTACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 2 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp AAATCCAGTGCCATCCACTCTGTGAGGGAGCTTGTAGGTAGTTGTTGGCCTTCCGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 2 (lower is better)
Translates to: KSSAIHSVRELVGSCWPSGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...GGAAGGCCAACAACTACCTACAAGCTCCCTCACAGAGTGGATGGCACTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATGATACTGTTCAGCTCTaGTTCTATGGCTGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GQTAQSALLTPMEYSISHDTVQL*FYGWAA
Trigger: TGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATC...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAACTGGTAGACAAACTTaGAAGACTAACACAAAAGAA +
Preference number: 2 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGTGRQT*KTNTKE
Trigger: TTCTTTTGTGTTAGTCTTGCAAGTTTGTCTACCAGT...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATAGTTAGCTTTCTCCCCTaGGCTGACCTAAAAATTCAA +
Preference number: 2 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIVSFLP*ADLKIQ
Trigger: TTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAAC...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGTTAGCTTTCTCCCCTaGGCTGACCTAAAAATTCAA +
Preference number: 2 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVVSFLP*ADLKIQ
Trigger: TTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAAC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 17 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 2 (lower is better)
Translates to: GHNERHFLLISFINIMKSSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 2 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATTCAACAAGGCCACAATaGGCGCCATTTTCTTCTTAT +
Preference number: 2 (lower is better)
Translates to: QVASDHESLCDTVQLCFYSTRPQ*APFSSY
Trigger: ATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGA...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 2 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCGCCTTGGTGATGAACTaGTTGCCAAATATGCTTTGC +
Preference number: 2 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSALVMN*LPNMLC
Trigger: GCAAAGCATATTTGGCAAGCAGTTCATCACCAAGGC...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAATACAGCATTTCACATaGAGAAGCCCGTCTAGCTCT +
Preference number: 2 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSAIQHFT*RSPSSS
Trigger: AGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTAT...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACCTCTGCTTCTATGGCTaGGCAGCACTCCAATCTAGA +
Preference number: 2 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYLCFYG*AALQSR
Trigger: TCTAGATTGGAGTGCTGCCCAGCCATAGAAGCAGAG...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAATCAGCTCTGCTTCTATaGCTGGGCAGCACTCCAATC +
Preference number: 2 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKSALLL*LGSTPI
Trigger: GATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGA...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp TCATTAATATACATGAGTCCAAAGGCCCAGGTCAATCCTAACAGGCAGAGCAGACAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 2 (lower is better)
Translates to: SLIYMSPKAQVNPNRQSRQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...TCTGCTCTGCCTGTTAGGATTGACCTGGGCCTTTGGACTCATGTATATTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGTCAACAAGGCCACAATaGGCGCCATTTTCTTCTTAT +
Preference number: 2 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRSTRPQ*APFSSY
Trigger: ATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGA...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGGATACTGTTCAGCTCTaGTTCTATGGCTGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: QQGHNERHFLLISFINIMDTVQL*FYGWAA
Trigger: TGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATC...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCCTTGGTGATGAACTaGTTGCCAAATATGCTTTGC +
Preference number: 2 (lower is better)
Translates to: GQTAQSALLTPMEYSISHALVMN*LPNMLC
Trigger: GCAAAGCATATTTGGCAAGCAGTTCATCACCAAGGC...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAACTCTGCTTCTATGGCTaGGCAGCACTCCAATCTAGA +
Preference number: 2 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKLCFYG*AALQSR
Trigger: TCTAGATTGGAGTGCTGCCCAGCCATAGAAGCAGAG...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAATCAGCTCTGCTTCTATaGCTGGGCAGCACTCCAATC +
Preference number: 2 (lower is better)
Translates to: RNRKQTICAMLVSVHYIESALLL*LGSTPI
Trigger: GATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGA...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGAATGAAGTCTCCATCTaGGGGGAAAGGACTGGGAAA +
Preference number: 2 (lower is better)
Translates to: ERHFLLISFINIMKSPSENEVSI*GERTGK
Trigger: TTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 17 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAGATACTGTTCAGCTCTaGTTCTATGGCTGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEDTVQL*FYGWAA
Trigger: TGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATC...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACGCCTTGGTGATGAACTaGTTGCCAAATATGCTTTGC +
Preference number: 2 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYALVMN*LPNMLC
Trigger: GCAAAGCATATTTGGCAAGCAGTTCATCACCAAGGC...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 2 (lower is better)
Translates to: KIVRESLFREQHQMSEYTPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 2 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAACTCACTAGGAGGGAGTaGATTTCCTCTAACAACTGG +
Preference number: 2 (lower is better)
Translates to: RNRKQTICAMLVSVHYIELTRRE*ISSNNW
Trigger: CCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAG...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTACACACGATGACCACTaGTTCTATCGACTCAGAATG +
Preference number: 2 (lower is better)
Translates to: GHNERHFLLISFINIMKSTHDDH*FYRLRM
Trigger: CATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAACACACGATGACCACTaGTTCTATCGACTCAGAATG +
Preference number: 2 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKTHDDH*FYRLRM
Trigger: CATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGT...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGTGATTTCTTGTCTGTTCTGCTAGCTCTCTGGCAATATTGGCAGCTGTTTCTCATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 2 (lower is better)
Translates to: SDFLSVLLALWQYWQLFLMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...GAGAAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAACAGACAAGAAATCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 2 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTCAACAAGGCCACAATaGGCGCCATTTTCTTCTTAT +
Preference number: 2 (lower is better)
Translates to: ERHFLLISFINIMKSPSESTRPQ*APFSSY
Trigger: ATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCAAAGGAAGGAAACTTTaGTCTTTTACTGGTAGACAA +
Preference number: 2 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSKGRKL*SFTGRQ
Trigger: TTGTCTACCAGTAAAAGAGCAAAGTTTCCTTCCTTT...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTACTGCTTGCCAAATATaGTTTGCAATACAACATATG +
Preference number: 2 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSTACQI*FAIQHM
Trigger: CATATGTTGTATTGCAAAGCATATTTGGCAAGCAGT...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCACTGCTTGCCAAATATaGTTTGCAATACAACATATG +
Preference number: 2 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSTACQI*FAIQHM
Trigger: CATATGTTGTATTGCAAAGCATATTTGGCAAGCAGT...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 2 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 2 (lower is better)
Translates to: ERHFLLISFINIMKSPSEGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAGAAAGCAGACTATATaGGCAATGCTAGTATCTGTA +
Preference number: 2 (lower is better)
Translates to: QQGHNERHFLLISFINIMRKQTI*AMLVSV
Trigger: TACAGATACTAGCATTGCGCATATAGTCTGCTTTCT...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR TCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 2 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGACTGGTAGACAAACTTaGAAGACTAACACAAAAGAA +
Preference number: 2 (lower is better)
Translates to: ERHFLLISFINIMKSPSETGRQT*KTNTKE
Trigger: TTCTTTTGTGTTAGTCTTGCAAGTTTGTCTACCAGT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR GCA 72 bp CGTCACCACCCTTGGCCGCTGCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTGCAGCGGGCACGCCGG +
Preference number: 3 (lower is better)
Translates to: RHHPWPLRLRSG*WWSHCLQRARR
Trigger: CCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGTGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR GCA 72 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTaGAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGT +
Preference number: 3 (lower is better)
Translates to: CGFGLGAGGHTV*SGHAGQGWHAG
Trigger: ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 72 bp TCGGCGTCACCACCCTTGGCCGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACG +
Preference number: 3 (lower is better)
Translates to: SASPPLAAAASV*VLVVTLSAAGT
Trigger: CGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGTGACGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 72 bp CGTCATCCAGCACCTCTACCGCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGCCCGGCAAGGATGCGG +
Preference number: 3 (lower is better)
Translates to: RHPAPLPRGMAC*YCGFFCPARMR
Trigger: CCGCATCCTTGCCGGGCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCGCGGTAGAGGTGCTGGATGACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp CCGCGGGGGATGGCGTGCTGGTACTGCGGTTTCTTCTaGCCGGCAAGGATGCGGTGGTACTCCTGCCTATGT +
Preference number: 3 (lower is better)
Translates to: PRGMACWYCGFF*PARMRWYSCLC
Trigger: ACATAGGCAGGAGTACCACCGCATCCTTGCCGGGCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp GTGGTCCTGGGGGAACCGCCTCCTGCTGTAATGGTGTaGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGG +
Preference number: 3 (lower is better)
Translates to: VVLGEPPPAVMV*LVVIRGVNPRG
Trigger: CCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCCAGGACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 72 bp TGTGGTGACGTCATCCAGCACCTCTACCGCGGGGGATaGCGTGCTGGTACTGCGGTTTCTTCTGCCCGGCAA +
Preference number: 3 (lower is better)
Translates to: CGDVIQHLYRGG*RAGTAVSSARQ
Trigger: TTGCCGGGCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCGCGGTAGAGGTGCTGGATGACGTCACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp TCGGGCTTCCACAGCCTCGCAGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGAGGGCAGGTGTGTGGT +
Preference number: 3 (lower is better)
Translates to: SGFHSLAALFHS*DLGGCRGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGCTGCGAGGCTGTGGAAGCCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp TCCTGCCTATGTTCCAGGTTGTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCATACCCAGGGATCCTG +
Preference number: 3 (lower is better)
Translates to: SCLCSRLWSGGW*WWSCFPYPGIL
Trigger: CAGGATCCCTGGGTATGGGAAGCACGACCACCAGCACCACCCTCCGGACCACAACCTGGAACATAGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp GGTTTCTTCTGCCCGGCAAGGATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGGTCCGGAGGGTGGTGC +
Preference number: 3 (lower is better)
Translates to: GFFCPARMRWYS*LCSRLWSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCAGGAGTACCACCGCATCCTTGCCGGGCAGAAGAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp GCCTCCTGCTGTAATGGTGTGGCTGGTGGTTATCCGTaGAGTAAACCCTCGGGGGCAGCAAGGGAGCATCGG +
Preference number: 3 (lower is better)
Translates to: ASCCNGVAGGYP*SKPSGAAREHR
Trigger: CCGATGCTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGCAGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 72 bp TGCCTATGTTCCAGGTTGTGGTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATACCCAGGGATCCTGTGG +
Preference number: 3 (lower is better)
Translates to: CLCSRLWSGGWC*WSCFPYPGILW
Trigger: CCACAGGATCCCTGGGTATGGGAAGCACGACCACCAGCACCACCCTCCGGACCACAACCTGGAACATAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp AGGATGCGGTGGTACTCCTGCCTATGTTCCAGGTTGTaGTCCGGAGGGTGGTGCTGGTGGTCGTGCTTCCCA +
Preference number: 3 (lower is better)
Translates to: RMRWYSCLCSRL*SGGWCWWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCACAACCTGGAACATAGGCAGGAGTACCACCGCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 3 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR TCA 72 bp AGCTCCTGTAGTCGACGGCCGCAGAAACGGCCACGATaGGCGCGGGCATCCCATAGCCGACCAGATAAAAGT +
Preference number: 3 (lower is better)
Translates to: SSCSRRPQKRPR*ARASHSRPDKS
Trigger: ACTTTTATCTGGTCGGCTATGGGATGCCCGCGCTCATCGTGGCCGTTTCTGCGGCCGTCGACTACAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp GGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: GMLVYRESLCGD*RSSVCSSVSRG
Trigger: CCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 72 bp TACTCCTGCCTATGTTCCAGGTTGTGGTCCGGAGGGTaGTGCTGGTGGTCGTGCTTCCCATACCCAGGGATC +
Preference number: 3 (lower is better)
Translates to: YSCLCSRLWSGG*CWWSCFPYPGI
Trigger: GATCCCTGGGTATGGGAAGCACGACCACCAGCACCACCCTCCGGACCACAACCTGGAACATAGGCAGGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: SHCLQRARRPGLACWCTEATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCATTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 3 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR TCA 72 bp GGGCTGCGCTGTCTTTTCCCCCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGCCAACCAGCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: GLRCLFPLVSNS*AGHPRGQPAGP
Trigger: TGGACCAGCTGGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGCGCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: HPRVIFYRLVTK*AGPLEVPSGEA
Trigger: GGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR GCA 72 bp CGTGCTGGTACTGCGGTTTCTTCTGCCCGGCAAGGATaGGGTGGTACTCCTGCCTATGTTCCAGGTTGTGGT +
Preference number: 3 (lower is better)
Translates to: RAGTAVSSARQG*GGTPAYVPGCG
Trigger: ACCACAACCTGGAACATAGGCAGGAGTACCACCGCATCCTTGCCGGGCAGAAGAAACCGCAGTACCAGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp TGGTACTGCGGTTTCTTCTGCCCGGCAAGGATGCGGTaGTACTCCTGCCTATGTTCCAGGTTGTGGTCCGGA +
Preference number: 3 (lower is better)
Translates to: WYCGFFCPARMR*YSCLCSRLWSG
Trigger: TCCGGACCACAACCTGGAACATAGGCAGGAGTACCACCGCATCCTTGCCGGGCAGAAGAAACCGCAGTACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGAAGGACTGGGAAAGATaGGGGCACAGGAGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWKDWER*GHRRSS
Trigger: TGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCTT...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTTGTGGTGAACTCAGGTaGCGAGTGACCATGAATCGC +
Preference number: 3 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTCGELR*RVTMNR
Trigger: GCGATTCATGGTCACTCGCAACCTGAGTTCACCACA...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 3 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPLERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 3 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 3 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 72 bp CTTGTTCAAGCTGCGGGCTGCGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTGGACATCCAAGAGGCC +
Preference number: 3 (lower is better)
Translates to: LVQAAGCAVFSP*CQIPELDIQEA
Trigger: GGCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGCGCAGCCCGCAGCTTGAACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp CGAAAGCGCTCTCCTCCACAGTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCACTTGTCGTCAGGTCTC +
Preference number: 3 (lower is better)
Translates to: RKRSPPQCQATW*PHAVDHLSSGL
Trigger: GAGACCTGACGACAAGTGATCAACTGCGTGCGGCCACCATGTTGCTTGACACTGTGGAGGAGAGCGCTTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCCTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 3 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVILERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 3 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 3 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp GCGGGTGCACGTGGTTTCTGGAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTTCGGCGTCACCACCCT +
Preference number: 3 (lower is better)
Translates to: AGARGFWSPGLA*FCSKHLRRHHP
Trigger: AGGGTGGTGACGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAAACCACGTGCACCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CCA 72 bp ACACGAAAGCGCTCTCCTCCACAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGATCACTTGTCGTCAGGT +
Preference number: 3 (lower is better)
Translates to: TRKRSPPQCQAT*WPHAVDHLSSG
Trigger: ACCTGACGACAAGTGATCAACTGCGTGCGGCCACCATGTTGCTTGACACTGTGGAGGAGAGCGCTTTCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTACTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 3 (lower is better)
Translates to: CTESPCAVTAGLLCARRLLERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR TCA 72 bp GGCCAACCAGCTGGTCCATGGCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGTGATTTCTTGTCTGTT +
Preference number: 3 (lower is better)
Translates to: GQPAGPWHGQSR*CPQRSSDFLSV
Trigger: AACAGACAAGAAATCACTTGAACGCTGGGGACATCACCTACTCTGTCCGTGCCATGGACCAGCTGGTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR TCA 72 bp GGAGACAGACAAGGGACAGCAAGATGCCAACCCACGTaGTCACATCCAGAAGAAGATCGTGGACTGCATCGC +
Preference number: 3 (lower is better)
Translates to: GDRQGTARCQPT*SHPEEDRGLHR
Trigger: GCGATGCAGTCCACGATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCTTGCTGTCCCTTGTCTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 3 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVLERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCTTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 3 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR TCA 72 bp TCCACAGTGTCAAGCAACATGGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCTCTCCAGGCATTCAAA +
Preference number: 3 (lower is better)
Translates to: STVSSNMVAARS*SLVVRSLQAFK
Trigger: TTTGAATGCCTGGAGAGACCTGACGACAAGTGATCAACTGCGTGCGGCCACCATGTTGCTTGACACTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR TCA 72 bp GGCATTGTTCAGAAGCCCCTCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGTGATGAAGGACGACTC +
Preference number: 3 (lower is better)
Translates to: GIVQKPLSVERC*AVYVSGDEGRL
Trigger: GAGTCGTCCTTCATCACCGGAGACATAAACAGCTCAGCATCGCTCAACAGAGAGGGGCTTCTGAACAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp CAACTGGTAGTGCAGGTGCCCACGTGGGGGTCAGACTaGTCAGTCAGCACTTTTAACTCCTATGGAATACAG +
Preference number: 3 (lower is better)
Translates to: QLVVQVPTWGSD*SVSTFNSYGIQ
Trigger: CTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTACCAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR CCA 72 bp ACCCAAGGAGAAGAGCAGTTGCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCAGGAGCAAGACATAGG +
Preference number: 3 (lower is better)
Translates to: TQGEEQLLRSGP*GSHIPSGARHR
Trigger: CCTATGTCTTGCTCCTGATGGAATATGGGACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTCCTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTGTGGTGAACTCAGGTaGCGAGTGACCATGAATCGC +
Preference number: 3 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLCGELR*RVTMNR
Trigger: GCGATTCATGGTCACTCGCAACCTGAGTTCACCACA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACTGTGGTGAACTCAGGTaGCGAGTGACCATGAATCGC +
Preference number: 3 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHCGELR*RVTMNR
Trigger: GCGATTCATGGTCACTCGCAACCTGAGTTCACCACA...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAGGACTGGGAAAGATaGGGGCACAGGAGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVKDWER*GHRRSS
Trigger: TGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCTT...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 17 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTAAGGACTGGGAAAGATaGGGGCACAGGAGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAKDWER*GHRRSS
Trigger: TGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCTT...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAATGAAGTCATCTTaGGACGAATACTCTGTCAGG +
Preference number: 3 (lower is better)
Translates to: CTESPCAVTAGLLCARRLAMKSS*DEYSVR
Trigger: CCTGACAGAGTATTCGTCCAAAGATGACTTCATTGC...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp CAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTaGCATCCCCGTGTCATCTTCTATAGACTAGTGACC +
Preference number: 3 (lower is better)
Translates to: QNGPPGVSSPVG*HPRVIFYRLVT
Trigger: GGTCACTAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR GCA 72 bp AACCAGATGTTTTCCCTGAGCCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAATGCGTGCGGAGGCATT +
Preference number: 3 (lower is better)
Translates to: NQMFSLSQSNSP*FSHYSNACGGI
Trigger: AATGCCTCCGCACGCATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp ATGCCAACCCACGTGATCACATCCAGAAGAAGATCGTaGACTGCATCGCTGTGCTTAACTTCCACATGTGCC +
Preference number: 3 (lower is better)
Translates to: MPTHVITSRRRS*TASLCLTSTCA
Trigger: GGCACATGTGGAAGTTAAGCACAGCGATGCAGTCCACGATCTTCTTCTGGATGTGATCACGTGGGTTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATAAGGACTGGGAAAGATaGGGGCACAGGAGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: QVASDHESLCDTVQLCFYKDWER*GHRRSS
Trigger: TGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCTT...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGATCATAGCTACTGCCTaGGTGATGAACTGCTTGCCA +
Preference number: 3 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGIIATA*VMNCLP
Trigger: TGGCAAGCAGTTCATCACCAAGGCAGTAGCTATGAT...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp CTTTGCTACCTGCCCCTGTCTGGTCTTAAACCACATGATTTCTCGGGCTTCCACGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: LCYLPLSGLKPHDFSGFHATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...GTGGAAGCCCGAGAAATCATGTGGTTTAAGACCAGACAGGGGCAGGTAGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCTAAATCTCAATCAGTaGTTTATTGGTCGGCAAACA +
Preference number: 3 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPLNLNQ*FIGRQT
Trigger: TGTTTGCCGACCAATAAACAACTGATTGAGATTTAG...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120128.8
3UTR TCA 72 bp AGAGATGTAGGAGACTTGTCCATGATGTACCGGCCCTaGTCTACTATCCAGAGGCCCGAAGTCCAAAGAGTA +
Preference number: 3 (lower is better)
Translates to: RDVGDLSMMYRP*STIQRPEVQRV
Trigger: TACTCTTTGGACTTCGGGCCTCTGGATAGTAGATCAGGGCCGGTACATCATGGACAAGTCTCCTACATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR TCA 72 bp CGAACACTGCACAGGCAATTGGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCAGTTCTGCCACGAACA +
Preference number: 3 (lower is better)
Translates to: RTLHRQLVGRFC*FQSGRAVLPRT
Trigger: TGTTCGTGGCAGAACTGCTCTTCCTGATTGGAATCAACAGAACCGACCAACCAATTGCCTGTGCAGTGTTCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp CGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTaGCTAAGTTGTTCACCAGTTTGTTCATCATATTCC +
Preference number: 3 (lower is better)
Translates to: RHPGRWRHLHSR*LSCSPVCSSYS
Trigger: GGAATATGATGAACAAACTGGTGAACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR GCA 72 bp CGCCAAGAAGAAGAAATGCAAAAGAGCCGCGAACACTaGACAGGCAATTGGTTGGTCGGTTCTGTTGATTCC +
Preference number: 3 (lower is better)
Translates to: RQEEEMQKSREH*TGNWLVGSVDS
Trigger: GGAATCAACAGAACCGACCAACCAATTGCCTGTGCAGTGTTCGCGGCTCTTTTGCATTTCTTCTTCTTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp TGCAAAAGAGCCGCGAACACTGCACAGGCAATTGGTTaGTCGGTTCTGTTGATTCCAATCAGGAAGAGCAGT +
Preference number: 3 (lower is better)
Translates to: CKRAANTAQAIG*SVLLIPIRKSS
Trigger: ACTGCTCTTCCTGATTGGAATCAACAGAACCGACCAACCAATTGCCTGTGCAGTGTTCGCGGCTCTTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGCTTGCCAAATATGCTTaGCAATACAACATATGTGCC +
Preference number: 3 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMLAKYA*QYNICA
Trigger: GGCACATATGTTGTATTGCAAAGCATATTTGGCAAG...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp GCCAACATACTTTGTCTGTTCCGTAGCTCCTGTAGTCGACGGCCGCAGAAACGGATGAGGTCATCCAACTaGAGACCATACAAAATGGAT +
Preference number: 3 (lower is better)
Translates to: ANILCLFRSSCSRRPQKRMRSSN*RPYKMD
Trigger: ATCCATTTTGTATGGTCTCAAGTTGGATGACCTCAT...CCGTTTCTGCGGCCGTCGACTACAGGAGCTACGGAACAGACAAAGTATGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 3 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 3 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp AACAGCATCAGATGTCGGAGTACACACGATGACCACTaGTTCTATCGACTCAGAATGGTCCACCAGGTGTTA +
Preference number: 3 (lower is better)
Translates to: NSIRCRSTHDDH*FYRLRMVHQVL
Trigger: TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACTCCGACATCTGATGCTGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR GCA 72 bp AGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTaGTTCTATGGCTGGGCAGCACTCCAATCTAGATGC +
Preference number: 3 (lower is better)
Translates to: SDHESLCDTVQL*FYGWAALQSRC
Trigger: GCATCTAGATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR CCA 72 bp GCCATCCACTCTGTGAGGGAGCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTCATCTTTGGACGAATA +
Preference number: 3 (lower is better)
Translates to: AIHSVRELVGSC*PSSNEVIFGRI
Trigger: TATTCGTCCAAAGATGACTTCATTGCTGGAAGGCCAACAACTACCTACAAGCTCCCTCACAGAGTGGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp TTCCGGCCATTTTGCTTTAATGTGTTTGCTGAGAGCTaGATGGTACTTCCGTGGCCCATGTTCTCTGGGAAT +
Preference number: 3 (lower is better)
Translates to: FRPFCFNVFAES*MVLPWPMFSGN
Trigger: ATTCCCAGAGAACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAAACACATTAAAGCAAAATGGCCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACTTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 3 (lower is better)
Translates to: TMNRYVILFSSASMAGQHFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 3 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR TCA 72 bp TTTTGCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTaGACTCAGGTTGCGAGTGACCATGAATCGCTATGT +
Preference number: 3 (lower is better)
Translates to: FCLCFSQLFPLW*TQVASDHESLC
Trigger: ACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR TCA 72 bp TGTCTTGTTGGTTGTCAGGAGTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGTGCGCTTGGAATAGCT +
Preference number: 3 (lower is better)
Translates to: CLVGCQESTALC*PITCHCALGIA
Trigger: AGCTATTCCAAGCGCACAATGACAGGTTATTGGTCAACACAAGGCTGTCGACTCCTGACAACCAACAAGACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp ATCGTGGACTGCATCGCTGTGCTTAACTTCCACATGTaGCATCAATACTGCAAAGTTGGTGAGGTGGTTACA +
Preference number: 3 (lower is better)
Translates to: IVDCIAVLNFHM*HQYCKVGEVVT
Trigger: TGTAACCACCTCACCAACTTTGCAGTATTGATGGCACATGTGGAAGTTAAGCACAGCGATGCAGTCCACGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp TCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTaGGCAGCACTCCAATCTAGATGCAGCATTGTTACT +
Preference number: 3 (lower is better)
Translates to: SLCDTVQLCFYG*AALQSRCSIVT
Trigger: AGTAACAATGCTGCATCTAGATTGGAGTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR CCA 72 bp TCACCAGTTTGTTCATCATATTCCGGTTCTGTTCGCTaGAGCGCTCGTGGTTGTTCAGGTATGAAGGGATAT +
Preference number: 3 (lower is better)
Translates to: SPVCSSYSGSVR*SARGCSGMKGY
Trigger: ATATCCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGATGAACAAACTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTAAGGACTGGGAAAGATaGGGGCACAGGAGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: GHNERHFLLISFINIMKSKDWER*GHRRSS
Trigger: TGAGCTCCTCCTGTGCCCCAATCTTTCCCAGTCCTT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGTTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 3 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR GCA 72 bp ATCGCTGTGCTTAACTTCCACATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTTACAGGAGCATGTAGT +
Preference number: 3 (lower is better)
Translates to: IAVLNFHMCHQY*KVGEVVTGACS
Trigger: ACTACATGCTCCTGTAACCACCTCACCAACTTTGCAGTATTGATGGCACATGTGGAAGTTAAGCACAGCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp CGTTCAAGTGATTTCTTGTCTGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTTCTCCGGATTTCAGCT +
Preference number: 3 (lower is better)
Translates to: RSSDFLSVLLAL*QYWQLFLRISA
Trigger: AGCTGAAATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp GGCCATTTTGCTTTAATGTGTTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGTTCTCTGGGAATTTTA +
Preference number: 3 (lower is better)
Translates to: GHFALMCLLRAG*YFRGPCSLGIL
Trigger: TAAAATTCCCAGAGAACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAAACACATTAAAGCAAAATGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTGTGGTGAACTCAGGTaGCGAGTGACCATGAATCGC +
Preference number: 3 (lower is better)
Translates to: ERHFLLISFINIMKSPSECGELR*RVTMNR
Trigger: GCGATTCATGGTCACTCGCAACCTGAGTTCACCACA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR TCA 72 bp CGTGGTTGTTCAGGTATGAAGGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTTTCTCTAGGGCGGTCT +
Preference number: 3 (lower is better)
Translates to: RGCSGMKGYSWK*VPLGSFSLGRS
Trigger: AGACCGCCCTAGAGAAAAAGATCCTAAAGGAACTCACTTCCAACTATATCCCTTCATACCTGAACAACCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR TCA 72 bp GCTGCTGTAATAACAGGGGAATTGACGATAACCGAGTaGTTTGTGGACATAGCTTCTGTGCCCAACTTCATA +
Preference number: 3 (lower is better)
Translates to: AAVITGELTITE*FVDIASVPNFI
Trigger: TATGAAGTTGGGCACAGAAGCTATGTCCACAAATCACTCGGTTATCGTCAATTCCCCTGTTATTACAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp GATTTCTTGTCTGTTCTGCTAGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATTTCAGCTTCTGTGTTA +
Preference number: 3 (lower is better)
Translates to: DFLSVLLALWQY*QLFLRISASVL
Trigger: TAACACAGAAGCTGAAATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAACAGACAAGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CCA 72 bp TTTAATGTGTTTGCTGAGAGCTGGATGGTACTTCCGTaGCCCATGTTCTCTGGGAATTTTAGATCTTCTAGG +
Preference number: 3 (lower is better)
Translates to: FNVFAESWMVLP*PMFSGNFRSSR
Trigger: CCTAGAAGATCTAAAATTCCCAGAGAACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAAACACATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCTGTGGTGAACTCAGGTaGCGAGTGACCATGAATCGC +
Preference number: 3 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFCGELR*RVTMNR
Trigger: GCGATTCATGGTCACTCGCAACCTGAGTTCACCACA...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR GCA 72 bp ACAAAAGCCACTCTAATCTCTCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAGAGCTGGATGGTACTT +
Preference number: 3 (lower is better)
Translates to: TKATLISPFRPF*FNVFAESWMVL
Trigger: AAGTACCATCCAGCTCTCAGCAAACACATTAAAGCAAAATGGCCGGAATGGAGAGATTAGAGTGGCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAATCATAGCTACTGCCTaGGTGATGAACTGCTTGCCA +
Preference number: 3 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEIIATA*VMNCLP
Trigger: TGGCAAGCAGTTCATCACCAAGGCAGTAGCTATGAT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR GCA 72 bp ACTGCCTTGGTGATGAACTGCTTGCCAAATATGCTTTaGAATACAACATATGTGCCCCGGAAACATAAAATT +
Preference number: 3 (lower is better)
Translates to: TALVMNCLPNML*NTTYVPRKHKI
Trigger: AATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAAGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR CCA 72 bp TTCTTCTTTGCCACTACATTAACAGGACTCAAATTCTaGAGGAACAGAAAGCAGACTATATGCGCAATGCTA +
Preference number: 3 (lower is better)
Translates to: FFFATTLTGLKF*RNRKQTICAML
Trigger: TAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAATTTGAGTCCTGTTAATGTAGTGGCAAAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR TCA 72 bp TCTGTTATCCTCATAGTTGATATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGCAGTATGGTGAAACAT +
Preference number: 3 (lower is better)
Translates to: SVILIVDIVKTA*FRFQYGSMVKH
Trigger: ATGTTTCACCATACTGCCATACTGAAACCTGAATCAGGCTGTCTTGACAATATCAACTATGAGGATAACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAATGAGGTCATCCAACTaGAGACCATACAAAATGGAT +
Preference number: 3 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEMRSSN*RPYKMD
Trigger: ATCCATTTTGTATGGTCTCAAGTTGGATGACCTCAT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR TCA 72 bp TTGCAACTTCTAACTGAATATTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAAGGTTATCAGCTAACA +
Preference number: 3 (lower is better)
Translates to: LQLLTEYCLYSP*QCRSSKGYQLT
Trigger: TGTTAGCTGATAACCTTTTGAAGACCGACATTGTCAGGGAGAATACAGACAATATTCAGTTAGAAGTTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAATCAATCAGTTGTTTATaGGTCGGCAAACAAGTTTCA +
Preference number: 3 (lower is better)
Translates to: RNRKQTICAMLVSVHYIESISCL*VGKQVS
Trigger: TGAAACTTGTTTGCCGACCAATAAACAACTGATTGA...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR-3UTR CAA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTATAAAGTGGGCATGTTaGCAATGGGACACATGTTTA +
Preference number: 3 (lower is better)
Translates to: GWYDMLNGYDYVADALKLIKWAC*QWDTCL
Trigger: TAAACATGTGTCCCATTGCAAACATGCCCACTTTAT...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCATGCTCCTGGGGCACCTaGTCCACGGACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRACSWGT*STDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCA...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCTGCTCCTGGGGCACCTaGTCCACGGACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGCSWGT*STDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCA...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCTTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGLGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCATGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RSGCWWSHCLQRARRPGLEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...CAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGAESLG*NLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGC...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAAGGGAGAGCGCCTCCTaGGCTGCGCTCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPRESAS*AALSVS
Trigger: CGACACGCTGAGCGCAGCCCAGGAGGCGCTCTCCCT...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSGCWWSHCLQRARRPGLDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...CAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: HCLQRARRPGLACWCTESSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGACGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGATCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGAATTGGGGCGCGGCTaGAAGCTTGGGCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTEELGRG*KLGLQS
Trigger: AGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTEAESLG*NLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCACCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTEEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAALSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCATACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCATTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGATCTGGCAGCTCCGCGTaGCCCCTGTCCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRSGSSA*PLSSMS
Trigger: GCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGA...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGTCTGGCAGCTCCGCGTaGCCCCTGTCCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAARESGSSA*PLSSMS
Trigger: GCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGA...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: RSGCWWSHCLQRARRPGLHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...CAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCATTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: HCLQRARRPGLACWCTESLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRALETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTERPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTEEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGACAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTEFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTATGCTCCTGGGGCACCTaGTCCACGGACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLCSWGT*STDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCA...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: HCLQRARRPGLACWCTESDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCCAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: RSGCWWSHCLQRARRPGLCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...CAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAASGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: DAASSRTMASSSLPLPKLGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...CAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: HCLQRARRPGLACWCTESCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
3UTR CAA 72 bp GCAAGGATGCGGTGGTACTCCTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGCTGGTGGTCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: ARMRWYSCLCSR*WSGGWCWWSCF
Trigger: GAAGCACGACCACCAGCACCACCCTCCGGACCACAACCTGGAACATAGGCAGGAGTACCACCGCATCCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CAA 72 bp TTCCACAGCCTCGCAGCTCTCTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAGGTGTGTGGTGACGTC +
Preference number: 4 (lower is better)
Translates to: FHSLAALFHSWD*GGCRGQVCGDV
Trigger: GACGTCACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGCTGCGAGGCTGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
CDS-3UTR TCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: DAASSRTMASSSLPLPKLVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...CAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: RSGCWWSHCLQRARRPGLPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...CAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGATACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGACACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: HCLQRARRPGLACWCTESHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAACCACCCTTGGCCGCTaGGGCTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSTTLGR*GFGLGA
Trigger: AGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTGCTCCTGGGGCACCTaGTCCACGGACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRCSWGT*STDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCACACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTELRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTEVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: HCLQRARRPGLACWCTESCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVRSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLAAASV*VLVVTL
Trigger: CAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCATTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGGTCTCTCATTGTGCTTaGCACCATGAACTACAGGTG +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRVSHCA*HHELQV
Trigger: CACCTGTAGTTCATGGTGGCAAGCACAATGAGAGAC...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCGTCTCTCATTGTGCTTaGCACCATGAACTACAGGTG +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVVSHCA*HHELQV
Trigger: CACCTGTAGTTCATGGTGGCAAGCACAATGAGAGAC...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTAESLG*NLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGC...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNREACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLRLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCACCACCCTTGGCCGCTaGGGCTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPTTLGR*GFGLGA
Trigger: AGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTGGCAGCTCCGCGTaGCCCCTGTCCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSSGSSA*PLSSMS
Trigger: GCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTGCTCCTGGGGCACCTaGTCCACGGACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSCSWGT*STDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTATCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAACGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAASIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSRSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRRSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGCGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMRSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGAATTGGGGCGCGGCTaGAAGCTTGGGCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLELGRG*KLGLQS
Trigger: AGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGAATTGGGGCGCGGCTaGAAGCTTGGGCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAELGRG*KLGLQS
Trigger: AGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTC...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCCTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: DAASSRTMASSSLPLPKLLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...CAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGCATTGCTTATAAGATaGTTAGCCATGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTEALLIR*LAMAPL
Trigger: CAGAGGAGCCATGGCTAATCATCTTATAAGCAATGC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGGCATTGCTTATAAGATaGTTAGCCATGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRALLIR*LAMAPL
Trigger: CAGAGGAGCCATGGCTAATCATCTTATAAGCAATGC...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGCATTGCTTATAAGATaGTTAGCCATGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRALLIR*LAMAPL
Trigger: CAGAGGAGCCATGGCTAATCATCTTATAAGCAATGC...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATTTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYLGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSLGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLAESLG*NLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCCTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSRLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRRLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTACCACCCTTGGCCGCTaGGGCTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGTTLGR*GFGLGA
Trigger: AGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACACCACCCTTGGCCGCTaGGGCTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHTTLGR*GFGLGA
Trigger: AGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGT...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGAGGGAGAGCGCCTCCTaGGCTGCGCTCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQERESAS*AALSVS
Trigger: CGACACGCTGAGCGCAGCCCAGGAGGCGCTCTCCCT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTCTGGCAGCTCCGCGTaGCCCCTGTCCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLSGSSA*PLSSMS
Trigger: GCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: HCLQRARRPGLACWCTESHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAATYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTEAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSRSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPAAASV*VLVVTL
Trigger: CAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTGCAGCGGGTGCACGTaGTTTCTGGAGCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVCSGCT*FLEPRF
Trigger: AAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
3UTR CAA 72 bp GGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GPLEVPSGEAPS*LGGTMNPSLLP
Trigger: CGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGAATTGGGGCGCGGCTaGAAGCTTGGGCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSELGRG*KLGLQS
Trigger: AGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTEPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVIEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTECLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAALETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMRVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAGTCTCTCATTGTGCTTaGCACCATGAACTACAGGTG +
Preference number: 4 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPVSHCA*HHELQV
Trigger: CACCTGTAGTTCATGGTGGCAAGCACAATGAGAGAC...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVISLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: HCLQRARRPGLACWCTESSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGACCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGATACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRANNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGACCACCCTTGGCCGCTaGGGCTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQETTLGR*GFGLGA
Trigger: AGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTCTGGCAGCTCCGCGTaGCCCCTGTCCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAISGSSA*PLSSMS
Trigger: GCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGA...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGATGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCRSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGCGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILRSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGRSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGAAASV*VLVVTL
Trigger: CAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLAAASV*VLVVTL
Trigger: CAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGAATTGGGGCGCGGCTaGAAGCTTGGGCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSELGRG*KLGLQS
Trigger: AGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTATTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVILPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: DAASSRTMASSSLPLPKLVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...CAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVIRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAARPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAARETRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSRVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCATCAGAAGCCCCTATTTaGTATGCAATGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPSEAPI*YAMFSF
Trigger: AAAGCTAAACATTGCATATCAAATAGGGGCTTCTGA...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCTCAGAAGCCCCTATTTaGTATGCAATGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGSEAPI*YAMFSF
Trigger: AAAGCTAAACATTGCATATCAAATAGGGGCTTCTGA...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACTTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHLGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCTTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCLGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGAESLG*NLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGC...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTAESLG*NLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGC...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQELSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAILSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVIMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVIYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGRLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATATCTGGCAGCTCCGCGTaGCCCCTGTCCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVISGSSA*PLSSMS
Trigger: GCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGA...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTGCTCCTGGGGCACCTaGTCCACGGACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVCSWGT*STDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHRSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIAAASV*VLVVTL
Trigger: CAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
3UTR CAA 72 bp CGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAACATCTTCGGCGTCAC +
Preference number: 4 (lower is better)
Translates to: RAAGARGFWSPG*ACFCSKHLRRH
Trigger: GTGACGCCGAAGATGTTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: DAASSRTMASSSLPLPKLSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...CAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGACTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: HCLQRARRPGLACWCTESGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: PARAGMLVYRESLCGDCRGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAARERCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAACTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAATRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHRVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGATCAGAAGCCCCTATTTaGTATGCAATGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRSEAPI*YAMFSF
Trigger: AAAGCTAAACATTGCATATCAAATAGGGGCTTCTGA...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHLGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGAESLG*NLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAACACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: HCLQRARRPGLACWCTESMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHRLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQERLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIRLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: SHCLQRARRPGLACWCTENLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAALVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGCAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: DAASSRTMASSSLPLPKLQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...CAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAARERADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: DAASSRTMASSSLPLPKLVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...CAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAATGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCAGCGGGTGCACGTaGTTTCTGGAGCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGCSGCT*FLEPRF
Trigger: AAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACTGCAGCGGGTGCACGTaGTTTCTGGAGCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHCSGCT*FLEPRF
Trigger: AAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCA...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
3UTR CAA 72 bp CTCCACAGTGTCAAGCAACATGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTCTCTCCAGGCATTCAA +
Preference number: 4 (lower is better)
Translates to: LHSVKQHGGRTQ*ITCRQVSPGIQ
Trigger: TTGAATGCCTGGAGAGACCTGACGACAAGTGATCAACTGCGTGCGGCCACCATGTTGCTTGACACTGTGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
CDS-3UTR TCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGATTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAACACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DAASSRTMASSSLPLPKLLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...CAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGATCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: CTESPCAVTAGLLCARRLTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTGTAGGGCTCTCTGTTaGGCGATGCTGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRCRALC*AMLSCL
Trigger: TAAACAGCTCAGCATCGCTCAACAGAGAGCCCTACA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQERVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIRVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAGCATTGCTTATAAGATaGTTAGCCATGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRALLIR*LAMAPL
Trigger: CAGAGGAGCCATGGCTAATCATCTTATAAGCAATGC...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVLGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEAESLG*NLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATATGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAARELGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQESLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLRLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGGGAGAGCGCCTCCTaGGCTGCGCTCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHRESAS*AALSVS
Trigger: CGACACGCTGAGCGCAGCCCAGGAGGCGCTCTCCCT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATCTGGCAGCTCCGCGTaGCCCCTGTCCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKSGSSA*PLSSMS
Trigger: GCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATGCTCCTGGGGCACCTaGTCCACGGACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKCSWGT*STDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSASGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CTESPCAVTAGLLCARRLAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTGCAGCGGGTGCACGTaGTTTCTGGAGCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQECSGCT*FLEPRF
Trigger: AAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTGCAGCGGGTGCACGTaGTTTCTGGAGCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAICSGCT*FLEPRF
Trigger: AAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCA...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
3UTR CAA 72 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: IFYRLVTKCAGP*EVPSGEAPSLL
Trigger: TAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CAA 72 bp TGTCAAGCAACATGGTGGCCGCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGGCATTCAAAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: CQATWWPHAVDH*SSGLSRHSKLV
Trigger: CACAAGCTTTGAATGCCTGGAGAGACCTGACGACAAGTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTATTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATAGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGATCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTGTAGGGCTCTCTGTTaGGCGATGCTGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSCRALC*AMLSCL
Trigger: TAAACAGCTCAGCATCGCTCAACAGAGAGCCCTACA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSARVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGCATTGCTTATAAGATaGTTAGCCATGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLALLIR*LAMAPL
Trigger: CAGAGGAGCCATGGCTAATCATCTTATAAGCAATGC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR TCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGCATTGCTTATAAGATaGTTAGCCATGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVALLIR*LAMAPL
Trigger: CAGAGGAGCCATGGCTAATCATCTTATAAGCAATGC...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR GCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATAGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIAESLG*NLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGC...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGACCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAATTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR GCA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: CTESPCAVTAGLLCARRLGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACTCTGGCAGCTCCGCGTaGCCCCTGTCCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHSGSSA*PLSSMS
Trigger: GCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGA...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATGCTCCTGGGGCACCTaGTCCACGGACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTCSWGT*STDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACTGCTCCTGGGGCACCTaGTCCACGGACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHCSWGT*STDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCA...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTACACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: CTESPCAVTAGLLCARRLHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAACTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: NGVAGGYPWSKPSGAARELSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQESLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKAAASV*VLVVTL
Trigger: CAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTGCAGCGGGTGCACGTaGTTTCTGGAGCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSACSGCT*FLEPRF
Trigger: AAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCA...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQELSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTATTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVIPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQELVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTAGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTATGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVILTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTATTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAILPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQERPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTCAGAAGCCCCTATTTaGTATGCAATGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAASEAPI*YAMFSF
Trigger: AAAGCTAAACATTGCATATCAAATAGGGGCTTCTGA...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCATTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSALGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAACCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSAGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAAGGGAGAGCGCCTCCTaGGCTGCGCTCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKRESAS*AALSVS
Trigger: CGACACGCTGAGCGCAGCCCAGGAGGCGCTCTCCCT...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTACAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: CTESPCAVTAGLLCARRLQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATCAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATAGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQETYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAICQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAILLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQELLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAALSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAATGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLECGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATATCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVISLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATCGGTCTGGGTGCTGGTaGTCACACTGTCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GQTAQSALLTPMEYSISHRSGCW*SHCLQR
Trigger: CCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
3UTR CAA 72 bp GGCGGTCTCGTTGTGGTTATAGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTATTCGCCGCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: GGLVVVIATVYN*HTVAQVFAASN
Trigger: ATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACCGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CAA 72 bp GCGAACACTGCACAGGCAATTGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGCAGTTCTGCCACGAAC +
Preference number: 4 (lower is better)
Translates to: ANTAQAIGWSVL*IPIRKSSSATN
Trigger: GTTCGTGGCAGAACTGCTCTTCCTGATTGGAATCAACAGAACCGACCAACCAATTGCCTGTGCAGTGTTCGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTCTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLERCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTACTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQELETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAITRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAISVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGGGTGGTGCTGGTGGTCGTGCTTCCCATACCCAGGGATCCTGTGGTAGAAATTCTGTTATTGCATCATaGACTACAGGTGCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: EGGAGGRASHTQGSCGRNSVIAS*TTGAKS
Trigger: GCTTTTAGCACCTGTAGTTCATGATGCAATAACAGA...ATTTCTACCACAGGATCCCTGGGTATGGGAAGCACGACCACCAGCACCACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGTCTCTCATTGTGCTTaGCACCATGAACTACAGGTG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGVSHCA*HHELQV
Trigger: CACCTGTAGTTCATGGTGGCAAGCACAATGAGAGAC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTLGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTATCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: CTESPCAVTAGLLCARRLSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGCTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHRLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTACCACCCTTGGCCGCTaGGGCTTCGGTCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSTTLGR*GFGLGA
Trigger: AGCACCCAGACCGAAGCCGCAGCGGCCAAGGGTGGT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAAGGGAGAGCGCCTCCTaGGCTGCGCTCAGCGTGTCG +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIERESAS*AALSVS
Trigger: CGACACGCTGAGCGCAGCCCAGGAGGCGCTCTCCCT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTCTGGCAGCTCCGCGTaGCCCCTGTCCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSESGSSA*PLSSMS
Trigger: GCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGTCTGGCAGCTCCGCGTaGCCCCTGTCCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMSGSSA*PLSSMS
Trigger: GCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGA...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGATGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQELRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSALLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISAAASV*VLVVTL
Trigger: CAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGC...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACGCTGCGGCTTCGGTCTaGGTGCTGGTGGTCACACTG +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYAAASV*VLVVTL
Trigger: CAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGC...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
3UTR CAA 72 bp TCATCTTCACTCCCGCTGCCTAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTCTGTTCGCTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SSSLPLPKLFTS*FIIFRFCSLER
Trigger: GCGCTCCAGCGAACAGAACCGGAATATGATGAACAAACTGGTGAACAACTTAGGCAGCGGGAGTGAAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000132375.8
3UTR CAA 72 bp ATGCAAAAGAGCCGCGAACACTGCACAGGCAATTGGTaGGTCGGTTCTGTTGATTCCAATCAGGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: MQKSREHCTGNW*VGSVDSNQEEQ
Trigger: CTGCTCTTCCTGATTGGAATCAACAGAACCGACCAACCAATTGCCTGTGCAGTGTTCGCGGCTCTTTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPREKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSAEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAATCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLESTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTATCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATGTAGGGCTCTCTGTTaGGCGATGCTGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLCRALC*AMLSCL
Trigger: TAAACAGCTCAGCATCGCTCAACAGAGAGCCCTACA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTGTAGGGCTCTCTGTTaGGCGATGCTGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVCRALC*AMLSCL
Trigger: TAAACAGCTCAGCATCGCTCAACAGAGAGCCCTACA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHRVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGCATTGCTTATAAGATaGTTAGCCATGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGALLIR*LAMAPL
Trigger: CAGAGGAGCCATGGCTAATCATCTTATAAGCAATGC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR TCA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAATCAGAAGCCCCTATTTaGTATGCAATGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQSEAPI*YAMFSF
Trigger: AAAGCTAAACATTGCATATCAAATAGGGGCTTCTGA...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTACCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTCTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: PLRRGPIFVRRNYESVAALNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSSPGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTGGGCT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRSPGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTGGGCT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCTGCTCCTGGGGCACCTaGTCCACGGACTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFCSWGT*STDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCA...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTAGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAACATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGGGAGGGTGGTGCTGGTaGTCGTGCTTCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISGGWCW*SCFPYP
Trigger: TGGGTATGGGAAGCACGACCACCAGCACCACCCTCC...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGGTTCCTGCTGGGCATaGCTGCTTTGCTACCTGCCC +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGGSCWA*LLCYLP
Trigger: GGGCAGGTAGCAAAGCAGCCATGCCCAGCAGGAACC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATATGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVICGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGGCTCTGCGAGCCTGTaGAGTACCGTCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGGSASL*STVLEF
Trigger: GAACTCCAGGACGGTACTCCACAGGCTCGCAGAGCC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATTGCAGCGGGTGCACGTaGTTTCTGGAGCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GQTAQSALLTPMEYSISHCSGCT*FLEPRF
Trigger: AAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCA...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATGCAGCGGGTGCACGTaGTTTCTGGAGCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTCSGCT*FLEPRF
Trigger: AAACCTGGGCTCCAGAAACCACGTGCACCCGCTGCA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGCCACCACTGCACACTaGGTTCTGTTATTGCATCAT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEATTAH*VLLLHH
Trigger: ATGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CAA 72 bp GTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTaGCGAGTGACCATGAATCGCTATGTGATACTGTTC +
Preference number: 4 (lower is better)
Translates to: VSHSYSRCGELR*RVTMNRYVILF
Trigger: GAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
3UTR CAA 72 bp GTGTCTTGTTGGTTGTCAGGAGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTGTGCGCTTGGAATAGC +
Preference number: 4 (lower is better)
Translates to: VSCWLSGVDSLV*TNNLSLCAWNS
Trigger: GCTATTCCAAGCGCACAATGACAGGTTATTGGTCAACACAAGGCTGTCGACTCCTGACAACCAACAAGACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
3UTR CAA 72 bp GTGAGGTGGTTACAGGAGCATGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAGCCTTGTGTTGACCAA +
Preference number: 4 (lower is better)
Translates to: VRWLQEHVVCVL*VVRSRQPCVDQ
Trigger: TTGGTCAACACAAGGCTGTCGACTCCTGACAACCAACAAGACACATACTACATGCTCCTGTAACCACCTCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GQTAQSALLTPMEYSISHEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQESFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAISFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAISTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQESTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATAAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTRIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGTCTCTCATTGTGCTTaGCACCATGAACTACAGGTG +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLVSHCA*HHELQV
Trigger: CACCTGTAGTTCATGGTGGCAAGCACAATGAGAGAC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCTCTCTGCGGACCACTaGCATGGGAATTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFLSADH*HGNWGA
Trigger: CGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAACCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTACCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTACTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQELGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SRCGELRLRVTMNRYVILPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTGGGGGAACCGCCTCCTaGTGTAATGGTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSGGTAS*CNGVAG
Trigger: ACCAGCCACACCATTACAGCAGGAGGCGGTTCCCCC...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPSPGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTGGGCT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATTCGCCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GQTAQSALLTPMEYSISHSPCSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGGCGA...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: CTESPCAVTAGLLCARRLNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAILVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQECTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSESGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAATCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSERGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSESIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTACTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGCTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISLRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACGGTGCACGTGGTTTCTaGAGCCCAGGTTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYGARGF*SPGLAC
Trigger: GCATGCCAAACCTGGGCTCCAGAAACCACGTGCACC...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGTGGCCGCACGCAGTTaGTCACTTGTCGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEVAARS*SLVVRS
Trigger: AGACCTGACGACAAGTGATCAACTGCGTGCGGCCAC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAICLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSASTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: GQTAQSALLTPMEYSISHLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGAGAGTCCCTGTGCGGTaGCTGCAGGTCTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSERVPVR*LQVFCV
Trigger: CACACAGAAGACCTGCAGTCACCGCACAGGGACTCT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCTCAGAAGCCCCTATTTaGTATGCAATGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVSEAPI*YAMFSF
Trigger: AAAGCTAAACATTGCATATCAAATAGGGGCTTCTGA...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCTTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFLGCNL*SWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAA...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQESIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTTGGTCCGGAGGGTGGTaGTGGTGGTCGTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLWSGGW*WWSCFP
Trigger: TGGGAAGCACGACCACCAGCACCACCCTCCGGACCA...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCCTGCTGGGCATGGCTaGTTTGCTACCTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFPAGHG*FATCPC
Trigger: ACAGGGGCAGGTAGCAAAGCAGCCATGCCCAGCAGG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTACTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAISMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCATACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSAYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGTCCCTGTGCGGTGACTaGAGGTCTTCTGTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMSLCGD*RSSVCS
Trigger: CGAGCACACAGAAGACCTGCAGTCACCGCACAGGGA...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAACGGCTTCGGTCTGGGTaGTGGTGGTCACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIERLRSG*WWSHCL
Trigger: CAGACAGTGTGACCACCAGCACCCAGACCGAAGCCG...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGSPGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTGGGCT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTTCCGGAGGGTGGTGCTaGTGGTCGTGCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFSGGWC*WSCFPY
Trigger: GTATGGGAAGCACGACCACCAGCACCACCCTCCGGA...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAACGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIERGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCGGGGGATGGCGTGCTaGTACTGCGGTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFRGMAC*YCGFFC
Trigger: GCAGAAGAAACCGCAGTACCAGCACGCCATCCCCCG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTTCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFSIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAATCCATAGCTGGGATTTaGGAGGCTGCCGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIESIAGI*EAAEGR
Trigger: CCTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGA...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATAGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSRHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCGTCATCCAGGACGATaGCGTCATCTTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSERHPGR*RHLHSR
Trigger: GCGGGAGTGAAGATGACGCCATCGTCCTGGATGACG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGCCCAGACTCTCCTCGTaGTTAAAGGACGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMPRLSS*LKDAAS
Trigger: TGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGG...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCTTCGGTCTGGGTGCTaGTGGTCACACTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSELRSGC*WSHCLQ
Trigger: CTGCAGACAGTGTGACCACCAGCACCCAGACCGAAG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSACLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGCTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSALTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTAGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATAGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCGGATTCCTCGTGAATaGGTTCCAGGCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSERIPRE*VPGPDS
Trigger: AGAGTCTGGGCCTGGAACTCATTCACGAGGAATCCG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTGCATCGGATTCCTCGTaGATGAGTTCCAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSASDSS*MSSRPR
Trigger: TCTGGGCCTGGAACTCATTCACGAGGAATCCGATGC...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEAESLG*NLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGC...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCACAGGAGAGCTCTCTaGGGACCACTGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFHRRAL*GPLPWE
Trigger: TTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTAATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: TMNRYVILFSSASMAGQHSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSESLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: ELRLRVTMNRYVILFSSASIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATATCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVISIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTTGGGATTTGGGAGGCTaGCGAGGGCAGGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLWDLGG*RGQVCG
Trigger: ACCACACACCTGCCCTCGGCAGCCTCCCAAATCCCA...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGAAGCTTGTTCAAGCTaGGGGCTGCGCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGEACSS*GLRCLF
Trigger: GAAAAGACAGCGCAGCCCGCAGCTTGAACAAGCTTC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATCCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GQTAQSALLTPMEYSISHPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAINNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQENNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGATTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTACAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHSPGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTGGGCT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGAGACTAGTGACCAAGTaGGCGGGTCCTTTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISRLVTK*AGPLEV
Trigger: GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSAATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTGCTCTCTTCCATAGCTaGGATTTGGGAGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSALFHS*DLGGCR
Trigger: TCGGCAGCCTCCCAAATCCCAGCTATGGAAGAGAGC...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSAALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSESLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAATCGCTGGAGCGCTCGTaGTTGTTCAGGTATGAAGGG +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKSLERS*LFRYEG
Trigger: CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGA...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSELSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAILATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTATTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSELPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACTGTAGGGCTCTCTGTTaGGCGATGCTGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYCRALC*AMLSCL
Trigger: TAAACAGCTCAGCATCGCTCAACAGAGAGCCCTACA...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCCTGTAGAGGGTCCTTaGACCATGCCCCAGATTGGT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFPVEGP*TMPQIG
Trigger: ACCAATCTGGGGCATGGTGCAAGGACCCTCTACAGG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTAGTCTATGTCGGACTTaGCACCCCATCGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFSLCRT*HPIGMG
Trigger: CCCCATACCGATGGGGTGGCAAGTCCGACATAGACT...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTATGCGGTGGTACTCCTaGCTATGTTCCAGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSMRWYS*LCSRLW
Trigger: CCACAACCTGGAACATAGGCAGGAGTACCACCGCAT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAGGCTGCTTTGCTACCTaGCCCTGTCTGGTCTTAAAC +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKGCFAT*PCLVLN
Trigger: GTTTAAGACCAGACAGGGGCAGGTAGCAAAGCAGCC...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAATACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACCTGGACATAGGCTCTaGAAGAGCGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGPGHRL*KSALFS
Trigger: AGAAAAGAGAGCGCTCTTGCAGAGCCTATGTCCAGG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGATACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLSPGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTGGGCT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAINLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCAGTGTCAAGCAACATaGTGGCCGCACGCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSQCQAT*WPHAVD
Trigger: ATCAACTGCGTGCGGCCACCATGTTGCTTGACACTG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTTTGTCCGCTCCTTGTTaGAGAAGAGGGCACCATCGT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFLSAPC*RRGHHR
Trigger: ACGATGGTGCCCTCTTCTTCAACAAGGAGCGGACAA...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTGAGAAGAGCAGTTGCTaGGATCTGGTCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLEKSSC*DLVLGG
Trigger: ACCCCCAAGGACCAGATCTCAGCAACTGCTCTTCTC...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR TCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTCACGGACAGAGTAGGTaGTGTCCCCAGCGTTCAAGT +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLHGQSR*CPQRSS
Trigger: ACTTGAACGCTGGGGACATCACCTACTCTGTCCGTG...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCCTGGTGTCAAATTCCTaGGCTGGACATCCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFLVSNS*AGHPRG
Trigger: GCCTCTTGGATGTCCAGCTCAGGAATTTGACACCAG...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGAGCGCTCTCTTTTCTaGAGCTTGTTCAAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFERSLF*SLFKLR
Trigger: CCGCAGCTTGAACAAGCTTCAGAAAAGAGAGCGCTC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCATGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSACLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSELETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTAGACCTCCACCAGCATaGTATACAGCTGCACCCCTT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFRPPPA*YTAAPL
Trigger: AAGGGGTGCAGCTGTATATCATGCTGGTGGAGGTCT...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSETRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTGTAGGGCTCTCTGTTaGGCGATGCTGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSECRALC*AMLSCL
Trigger: TAAACAGCTCAGCATCGCTCAACAGAGAGCCCTACA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTTGTAGGGCTCTCTGTTaGGCGATGCTGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSCRALC*AMLSCL
Trigger: TAAACAGCTCAGCATCGCTCAACAGAGAGCCCTACA...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTCAGAAGCCCCTATTTaGTATGCAATGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVSEAPI*YAMFSF
Trigger: AAAGCTAAACATTGCATATCAAATAGGGGCTTCTGA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: QVASDHESLCDTVQLCFYSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTAAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR GCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTTACACCTATGGTTCCTaGTGGGCATGGCTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFYTYGS*WAWLLC
Trigger: GCAAAGCAGCCATGCCCAGCAGGAACCATAGGTGTA...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCACCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSAPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCCAGGAAGAGCAGTTCTaGCACGAACAGGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFQEEQF*HEQADA
Trigger: TGCATCAGCCTGTTCGTGGCAGAACTGCTCTTCCTG...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTACTTCCTACGGGAATaGTCGCTCTCAAAGACCTCC +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEYFLRE*SLSKTS
Trigger: GGAGGTCTTTGAGAGCGAGCATTCCCGTAGGAAGTA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAATTCCCACTACAGCAATaGGTGCGGAGGCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEFPLQQ*VRRHFP
Trigger: TGGGAAATGCCTCCGCACGCATTGCTGTAGTGGGAA...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCCCACGGTCTATAATTTaGACACAGTTGCTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSPRSII*TQLLRY
Trigger: ATACCTGAGCAACTGTGTGCAAATTATAGACCGTGG...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CCA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATAAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: YSRCGELRLRVTMNRYVINLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: GQTAQSALLTPMEYSISHCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGRADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTACCTATGGTTCCTGCTaGGCATGGCTGCTTTGCTAC +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFTYGSC*AWLLCY
Trigger: GTAGCAAAGCAGCCATGCCCAGCAGGAACCATAGGT...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSELRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCTGAGATCTGGTCCTTaGGGGTCCCATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSLRSGP*GSHIPS
Trigger: TGATGGAATATGGGACCCCCAAGGACCAGATCTCAG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGCAGTTGCTGAGATCTaGTCCTTGGGGGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFAVAEI*SLGVPY
Trigger: ATATGGGACCCCCAAGGACCAGATCTCAGCAACTGC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSECGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGATTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGATCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGATACTGCAAAGTTGGTaGGGTGGTTACAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEILQSW*GGYRSM
Trigger: CATGCTCCTGTAACCACCTCACCAACTTTGCAGTAT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSERCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTCTGCCACGAACAGGCTaGTGCAGAGGTTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLLPRTG*CRGSCE
Trigger: TTCACAAGAACCTCTGCATCAGCCTGTTCGTGGCAG...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFSVERC*AVYVSG
Trigger: ACCGGAGACATAAACAGCTCAGCATCGCTCAACAGA...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAAAATACATCAGGACCTaGCACCACTGCACACTGGGT +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEKYIRT*HHCTLG
Trigger: ACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000132375.8
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: GQTAQSALLTPMEYSISHMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCAGCCCAGGTTTGGCATaGTTTTGTAGTAAACATCTT +
Preference number: 4 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSSPGLA*FCSKHL
Trigger: AAGATGTTTACTACAAAAGCATGCCAAACCTGGGCT...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTGACAACGGAGCTCAATaGGGTAGCTCTCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLDNGAQ*GSSHRR
Trigger: TCTCCTGTGAGAGCTACCCCATTGAGCTCCGTTGTC...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACATGCCCCAGATTGGTaGTCAGATTCAAACAAGTGT +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGHAPDW*SDSNKC
Trigger: ACACTTGTTTGAATCTGACCACCAATCTGGGGCATG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGCACCATGCCCCAGATTaGTGGTCAGATTCAAACAAG +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMHHAPD*WSDSNK
Trigger: CTTGTTTGAATCTGACCACCAATCTGGGGCATGGTG...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGTCAAATTCCTGAGCTaGACATCCAAGAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFVKFLS*TSKRPT
Trigger: GGTTGGCCTCTTGGATGTCCAGCTCAGGAATTTGAC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGCTGTCTTTTCCCCCTaGTGTCAAATTCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFAVFSP*CQIPEL
Trigger: CAGCTCAGGAATTTGACACCAGGGGGAAAAGACAGC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGGCATTCAAAGCTTGTaGCTGAAGGAGGTTGTTAAC +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGGIQSL*LKEVVN
Trigger: GTTAACAACCTCCTTCAGCCACAAGCTTTGAATGCC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTTGTCAAGCAACATGGTaGCCGCACGCAGTTGATCAC +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLCQATW*PHAVDH
Trigger: GTGATCAACTGCGTGCGGCCACCATGTTGCTTGACA...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTTTGCTGAGAGCTGGATaGTACTTCCGTGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLLLRAG*YFRGPC
Trigger: ACATGGGCCACGGAAGTACCATCCAGCTCTCAGCAA...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
3UTR CAA 72 bp AGACACCTCTTAGCTTCTAGAATCATAGCTACTGCCTaGGTGATGAACTGCTTGCCAAATATGCTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: RHLLASRIIATA*VMNCLPNMLCN
Trigger: ATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAAGGCAGTAGCTATGATTCTAGAAGCTAAGAGGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
ENSMUST00000132375.8
CDS-3UTR TCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTCTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGATTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMSTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTCGACAGCCTTGTGTTaGCCAATAACCTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSESTALC*PITCHC
Trigger: ACAATGACAGGTTATTGGTCAACACAAGGCTGTCGA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTAGATGCCAACCCACGTaGTCACATCCAGAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFRCQPT*SHPEED
Trigger: ATCTTCTTCTGGATGTGATCACGTGGGTTGGCATCT...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGTTGGTCGGTTCTGTTaGTTCCAATCAGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFVGRFC*FQSGRA
Trigger: TGCTCTTCCTGATTGGAATCAACAGAACCGACCAAC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTCTAGAAACATCCAGGTaGAGGCCGCCAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLLETSR*RPPRRR
Trigger: TCTTCTTCTTGGCGGCCTTCACCTGGATGTTTCTAG...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTACCAGATGTTTTCCCTaGGCCAATCGAACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLTRCFP*ANRTLR
Trigger: ACGGAGAGTTCGATTGGCTCAGGGAAAACATCTGGT...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: KHNITQQGHNERHFLLISSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTCACTACAGCAATGCGTaGGGAGGCATTTCCCATACT +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLHYSNA*GGISHT
Trigger: AGTATGGGAAATGCCTCCGCACGCATTGCTGTAGTG...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCAATCGAACTCTCCGTaGTTTTCCCACTACAGCAAT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSQSNSP*FSHYSN
Trigger: ATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGGATTGTTAGTACCATaGGGACGAAGCAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFGLLVP*GRSRAL
Trigger: CAATGCTCTGCTTCGTCCGCATGGTACTAACAATCC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGCCACCACTGCACACTaGGTTCTGTTATTGCATCTT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFATTAH*VLLLHL
Trigger: AAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSECTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAAGAGCAGATTGTCCCTaGGATTGTAATCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIERADCP*DCNPQL
Trigger: CAGCTGTGGATTACAATCCCAGGGACAATCTGCTCT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAAAGTTGATACACCTATaGTTCCTGCTGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEKLIHL*FLLGMA
Trigger: AGCCATGCCCAGCAGGAACCATAGGTGTATCAACTT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGCTCTCTGGCAATATTaGCAGCTGTTTCTCCGGATT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFALWQY*QLFLRI
Trigger: AATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTTGTGGAGTACCGTCCTaGAGTTCGAGAACCAGATGT +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLCGVPS*SSRTRC
Trigger: ACATCTGGTTCTCGAACTCCAGGACGGTACTCCACA...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCTTCAAAGCTTGTGGCTaGAGGAGGTTGTTAACTGTC +
Preference number: 4 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFFKACG*RRLLTV
Trigger: GACAGTTAACAACCTCCTTCAGCCACAAGCTTTGAA...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTTTGACGATAACCGAGTaGTTTGTGGACATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSLTITE*FVDIAS
Trigger: AGAAGCTATGTCCACAAATCACTCGGTTATCGTCAA...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGGAATACAGCATTTCACATGGATATAGTTGGAAGTaGGTTCCTTTAGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: GQTAQSALLTPMEYSISHGYSWK*VPLGSF
Trigger: AAAAGATCCTAAAGGAACTCACTTCCAACTATATCC...ATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR TCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTGTGGTTGTTCAGGTATaGAGGGATATAGTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSVVVQV*RDIVGS
Trigger: ACTTCCAACTATATCCCTTCATACCTGAACAACCAC...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSESIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAACCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCACCAAGCTATCCTTaGTTTGGTCAGTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSPPSYP*FGQCCK
Trigger: TTTACAACACTGACCAAAGCAAGGATAGCTTGGTGG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCTAGGTTTCCTTCCGTaGTCAGTCTTGCAACTTCTA +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFLGFLP*SVLQLL
Trigger: TAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSAEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSSMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCAATCTTATTACCGGTaGCCTCGTTGTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFQSYYR*PRCHHP
Trigger: AGGATGATGACAACGAGGCCACCGGTAATAAGATTG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAATGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIECTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTTGTACTGGTAAGAGTTaGGAAAGGGTACATCCACCA +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFCTGKS*ERVHPP
Trigger: TGGTGGATGTACCCTTTCCCAACTCTTACCAGTACA...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: QQGHNERHFLLISFINIMLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGCAAAGTTGGTGAGGTaGTTACAGGAGCATGTAGTA +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFAKLVR*LQEHVV
Trigger: TACTACATGCTCCTGTAACCACCTCACCAACTTTGC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCCTCATATACAGATTTaGCCACATACAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFPHIQI*PHTESH
Trigger: GTGGGATTCTGTATGTGGTCAAATCTGTATATGAGG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTAGCTTCTGTGTTATGTaGTTGACCCAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLSFCVM*LTQGEE
Trigger: CTCTTCTCCTTGGGTCAATCACATAACACAGAAGCT...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTGGAAGAAGCAGAATGTaGAGATGCAAATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLGRSRM*RCKSGD
Trigger: GTCTCCTGATTTGCATCTTCACATTCTGCTTCTTCC...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTATTGTCAAGACAGCCTaGTTCAGGTTTCAGTATGGC +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLIVKTA*FRFQYG
Trigger: GCCATACTGAAACCTGAATCAGGCTGTCTTGACAAT...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGCATTGCTTATAAGATaGTTAGCCATGGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFALLIR*LAMAPT
Trigger: TGTAGGAGCCATGGCTAATCATCTTATAAGCAATGC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTATACTACAAATCCAGTaGCATCCACTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLILQIQ*HPLCEG
Trigger: TCCCTCACAGAGTGGATGGCACTGGATTTGTAGTAT...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTTCCATTTTCATCCACTaGCAAGTCTATGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFSIFIH*QVYVGL
Trigger: AAGTCCGACATAGACTTGGCAGTGGATGAAAATGGA...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAACCATTCCGGCCATTTTaGTTTAATGTGTTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEPFRPF*FNVFAE
Trigger: CTCAGCAAACACATTAAAGCAAAATGGCCGGAATGG...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: KIVRESLFREQHQMSEYTEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAAATAACCTGTCATTGTaGGCTTGGAATAGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKNNLSL*AWNSSK
Trigger: TTTGGAGCTATTCCAAGCGCACAATGACAGGTTATT...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAATGTGCCATCAATACTaGAAAGTTGGTGAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEMCHQY*KVGEVV
Trigger: AACCACCTCACCAACTTTGCAGTATTGATGGCACAT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAAGCATGATATACAGCTaGACCCCTTCTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIESMIYS*TPSRNI
Trigger: GATGTTTCTAGAAGGGGTGCAGCTGTATATCATGCT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTCTTGTAGGTAGTTGTTaGCCTTCCAGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLLVGSC*PSSNEV
Trigger: GACTTCATTGCTGGAAGGCCAACAACTACCTACAAG...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTGTTCTGCTAGCTCTCTaGCAATATTGGCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLVLLAL*QYWQLF
Trigger: AAACAGCTGCCAATATTGCCAGAGAGCTAGCAGAAC...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCTGTCATTGTGCGCTTaGAATAGCTCCAAAATGAAC +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFLSLCA*NSSKMN
Trigger: GTTCATTTTGGAGCTATTCCAAGCGCACAATGACAG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
3UTR CAA 72 bp ATTTTAGATCTTCTAGGTTTCCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATATTGTCTGTATTCTCCC +
Preference number: 4 (lower is better)
Translates to: ILDLLGFLPCSV*QLLTEYCLYSP
Trigger: GGGAGAATACAGACAATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAGGAAACCTAGAAGATCTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
CDS-3UTR TCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTTGTCTGTATTCTCCCTaGCAATGTCGGTCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLCLYSP*QCRSSK
Trigger: TTTTGAAGACCGACATTGTCAGGGAGAATACAGACA...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSEIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAACTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKLNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CCA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: GHNERHFLLISFINIMKSNLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CCA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGAATCTTATAGGCATCTaGCAGATAACACCGAATGTT +
Preference number: 4 (lower is better)
Translates to: ERHFLLISFINIMKSPSENLIGI*QITPNV
Trigger: AACATTCGGTGTTATCTGCCAGATGCCTATAAGATT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCTTGCAACTTCTAACTaGATATTGTCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFLATSN*ILSVFS
Trigger: GGAGAATACAGACAATATTCAGTTAGAAGTTGCAAG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR TCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGGAATAGCTCCAAAATaGACAGTTAGGGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFGIAPK*TVRVEI
Trigger: AATTTCAACCCTAACTGTTCATTTTGGAGCTATTCC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTAGCATTTGCTATGATTaGCTCTCCACTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLSICYD*LSTLYP
Trigger: AGGATAAAGAGTGGAGAGGCAATCATAGCAAATGCT...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR GCA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTATTGTAATCCACAGCTaGTATGTACTGGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFIVIHS*YVLVRV
Trigger: AACTCTTACCAGTACATAGCAGCTGTGGATTACAAT...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAACTTAACTTCCACATGTaGCATCAATACTGCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RNRKQTICAMLVSVHYIELNFHM*HQYCKV
Trigger: AACTTTGCAGTATTGATGGCACATGTGGAAGTTAAG...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR GCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTATGGTAATTAGCATTTaGTATGATTGCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLMVISI*YDCLST
Trigger: AGTGGAGAGGCAATCATAGCAAATGCTAATTACCAT...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR GCA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTGAATTCCTTATTTATTaGTGCTGTAATAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: GWYDMLNGYDYVADALKLEFLIY*CCNNRG
Trigger: TCCCCTGTTATTACAGCAGCAATAAATAAGGAATTC...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS CCA 90 bp TGCCGCTGGCTGCTGAAGGAGATGTCTGGGAGGGAGAGCGCCTCCTaGGCTGCGCTCAGCGTGTCGCAGTGGAGCAGCGAGGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: CRWLLKEMSGRESAS*AALSVSQWSSEGWM
Trigger: CATCCAGCCCTCGCTGCTCCACTGCGACACGCTGAGCGCAGCCCAGGAGGCGCTCTCCCTCCCAGACATCTCCTTCAGCAGCCAGCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS CCA 90 bp GGGAATTGGGGCGCGGCTGAAAGCTTGGGCTGCAATCTGTGCTCCTaGGGCACCTGGTCCACGGACTCCTCTGGCAGCTCCGCGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GNWGAAESLGCNLCS*GTWSTDSSGSSAWP
Trigger: GGGCCACGCGGAGCTGCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RSGCWWSHCLQRARRPGLFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...CAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS TCA 90 bp GACTCCTCTGGCAGCTCCGCGTGGCCCCTGTCCTCGATGAGCCGTTaGGCGCTCTGCCGCTGGCTGCTGAAGGAGATGTCTGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: DSSGSSAWPLSSMSR*ALCRWLLKEMSGRE
Trigger: CTCCCTCCCAGACATCTCCTTCAGCAGCCAGCGGCAGAGCGCTCAACGGCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGAGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS GCA 90 bp CTGGCTGCTGAAGGAGATGTCTGGGAGGGAGAGCGCCTCCTGGGCTaGGCTCAGCGTGTCGCAGTGGAGCAGCGAGGGCTGGATGTCTCT +
Preference number: 5 (lower is better)
Translates to: LAAEGDVWEGERLLG*AQRVAVEQRGLDVS
Trigger: AGAGACATCCAGCCCTCGCTGCTCCACTGCGACACGCTGAGCGCAGCCCAGGAGGCGCTCTCCCTCCCAGACATCTCCTTCAGCAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS GCA 90 bp TGCCATGGGAATTGGGGCGCGGCTGAAAGCTTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCCACGGACTCCTCTGGCAGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: CHGNWGAAESLGCNL*SWGTWSTDSSGSSA
Trigger: CGCGGAGCTGCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTCCCATGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS GCA 90 bp GCGGACCACTGCCATGGGAATTGGGGCGCGGCTGAAAGCTTGGGCTaGAATCTGTGCTCCTGGGGCACCTGGTCCACGGACTCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: ADHCHGNWGAAESLG*NLCSWGTWSTDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTCCCATGGCAGTGGTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: HCLQRARRPGLACWCTESFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PARAGMLVYRESLCGDCRFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS TCA 90 bp AGGAGAGCTCTCTGCGGACCACTGCCATGGGAATTGGGGCGCGGCTaGAAGCTTGGGCTGCAATCTGTGCTCCTGGGGCACCTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: RRALCGPLPWELGRG*KLGLQSVLLGHLVH
Trigger: GTGGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS CCA 90 bp TCTCTGCGGACCACTGCCATGGGAATTGGGGCGCGGCTGAAAGCTTaGGCTGCAATCTGTGCTCCTGGGGCACCTGGTCCACGGACTCCT +
Preference number: 5 (lower is better)
Translates to: SLRTTAMGIGARLKA*AAICAPGAPGPRTP
Trigger: AGGAGTCCGTGGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTATGCTGATAGAAGGGTaGTTACAGACCGCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGMLIEG*LQTAGS
Trigger: GGAACCGGCGGTCTGTAACAACCCTTCTATCAGCAT...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS CCA 90 bp GTAGCTCTCACAGGAGAGCTCTCTGCGGACCACTGCCATGGGAATTaGGGCGCGGCTGAAAGCTTGGGCTGCAATCTGTGCTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: VALTGELSADHCHGN*GAAESLGCNLCSWG
Trigger: GCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAGCTCTCCTGTGAGAGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGTTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: RSGCWWSHCLQRARRPGLLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...CAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGACACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: GLGAGGHTVCSGHAGQGWVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...CCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGCCATGGCTCCTCTGTaGAGCGATGCTGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: SHCLQRARRPGLACWCTEAMAPL*SDAELF
Trigger: AAACAGCTCAGCATCGCTCAACAGAGGAGCCATGGC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAATGCTGATAGAAGGGTaGTTACAGACCGCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAMLIEG*LQTAGS
Trigger: GGAACCGGCGGTCTGTAACAACCCTTCTATCAGCAT...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CGCGCCCCAGCTGGTAGTAGGCGTGCAGCGGGTGCACGTGGTTTCTGGAGCCCAAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: RAPAGSRRAAGARGFWSPSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...TGGGCTCCAGAAACCACGTGCACCCGCTGCACGCCTACTACCAGCTGGGGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: AGGHTVCSGHAGQGWHAGVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...ACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: VWVLVVTLSAAGTPARAGHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...GCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGCCTATAACCCATGACTaGATGAAGGGTCTGTTATCC +
Preference number: 5 (lower is better)
Translates to: RSGCWWSHCLQRARRPGLPITHD*MKGLLS
Trigger: GGATAACAGACCCTTCATCAAGTCATGGGTTATAGG...CAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCATGCTGATAGAAGGGTaGTTACAGACCGCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVMLIEG*LQTAGS
Trigger: GGAACCGGCGGTCTGTAACAACCCTTCTATCAGCAT...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGATGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: SHCLQRARRPGLACWCTESSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: PARAGMLVYRESLCGDCRSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: HCLQRARRPGLACWCTESPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRATNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCAGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCGCCATGGCTCCTCTGTaGAGCGATGCTGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRAMAPL*SDAELF
Trigger: AAACAGCTCAGCATCGCTCAACAGAGGAGCCATGGC...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCCTTGTATCCCTGGCATaGTTCAGAAGCCCCTATTTG +
Preference number: 5 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGLVSLA*FRSPYL
Trigger: CAAATAGGGGCTTCTGAACAATGCCAGGGATACAAG...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTTTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: HCLQRARRPGLACWCTESLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...ACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVICLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp TTGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LAAAASVWVLVVTLSAAGRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...GCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVIGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACGCCGGCCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: CGFGLGAGGHTVCSGHAGLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...GCCGGCGTGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: PARAGMLVYRESLCGDCRTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: SHCLQRARRPGLACWCTEVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRKCAGP*EVPSGE
Trigger: CTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCTTGTATCCCTGGCATaGTTCAGAAGCCCCTATTTG +
Preference number: 5 (lower is better)
Translates to: TVCSGHAGQGWHAGVQRVLVSLA*FRSPYL
Trigger: CAAATAGGGGCTTCTGAACAATGCCAGGGATACAAG...GACTCTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp TGGCCGCTGCGGCTTCGGTCTGGGTGCTGGTGGTCACACTGTCTGCAGCGGGCACAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: WPLRLRSGCWWSHCLQRAQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...TGCCCGCTGCAGACAGTGTGACCACCAGCACCCAGACCGAAGCCGCAGCGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GTCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGACGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: VTLSAAGTPARAGMLVYRRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...TCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: CTESPCAVTAGLLCARRLGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCACACTGTCTGCAGCGGGCACGCCGGCCAGGGCTGGCATGCTGGTGTACAGAGCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: SHCLQRARRPGLACWCTEHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...CTCTGTACACCAGCATGCCAGCCCTGGCCGGCGTGCCCGCTGCAGACAGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSKCAGP*EVPSGE
Trigger: CTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAGCCATGGCTCCTCTGTaGAGCGATGCTGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRAMAPL*SDAELF
Trigger: AAACAGCTCAGCATCGCTCAACAGAGGAGCCATGGC...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGATGCTGATAGAAGGGTaGTTACAGACCGCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: DAASSRTMASSSLPLPKLMLIEG*LQTAGS
Trigger: GGAACCGGCGGTCTGTAACAACCCTTCTATCAGCAT...CAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAAGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: SRCGELRLRVTMNRYVILKCAGP*EVPSGE
Trigger: CTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTT...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGKCAGP*EVPSGE
Trigger: CTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGCCATGGCTCCTCTGTaGAGCGATGCTGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLAMAPL*SDAELF
Trigger: AAACAGCTCAGCATCGCTCAACAGAGGAGCCATGGC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TGTACAGAGAGTCCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTACACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CTESPCAVTAGLLCARRLHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...TAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGGACTCTCTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCCTATAACCCATGACTaGATGAAGGGTCTGTTATCC +
Preference number: 5 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRPITHD*MKGLLS
Trigger: GGATAACAGACCCTTCATCAAGTCATGGGTTATAGG...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118442.8
ENSMUST00000120128.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEKCAGP*EVPSGE
Trigger: CTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCCATGGCTCCTCTGTaGAGCGATGCTGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRAMAPL*SDAELF
Trigger: AAACAGCTCAGCATCGCTCAACAGAGGAGCCATGGC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS TCA 90 bp TCTCTGCGGACCACTGCCATGGGAATTGGGGCGCGGCTGAAAGCATaGACTACAGGTGCTAAAAGCATCGTGAGGATGAGTAGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SLRTTAMGIGARLKA*TTGAKSIVRMSSCG
Trigger: ACCACAGCTACTCATCCTCACGATGCTTTTAGCACCTGTAGTTCATGCTTTCAGCCGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117253.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000122037.8
CDS-3UTR CAA 90 bp CCGGCCAGGGCTGGCATGCTGGTGTACAGAGAGTCCCTGTGCGGTGACTGCAGGCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: PARAGMLVYRESLCGDCRQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...CCTGCAGTCACCGCACAGGGACTCTCTGTACACCAGCATGCCAGCCCTGGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQECLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: TMNRYVILFSSASMAGQHCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTATGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp TCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCTCCTGCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: SVSRGKKLSLWSWGNRLLQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...CAGGAGGCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCACAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGTCCTGGGGGAACCGCCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: CSSVSRGKKLSLWSWGNRQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...GCGGTTCCCCCAGGACCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: PLRRGPIFVRRNYESVAAGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLKCAGP*EVPSGE
Trigger: CTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCAACCCATGACTTGATATaGTCAAGACAGCCTGATTCA +
Preference number: 5 (lower is better)
Translates to: RLVTKCAGPLEVPSGEAPTHDLI*SRQPDS
Trigger: TGAATCAGGCTGTCTTGACAATATCAAGTCATGGGT...TGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000119385.8
ENSMUST00000120144.8
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGAGCCCCTCTTGTGTGTaGTACATGCTGATAGAAGGG +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVSPSCV*YMLIEG
Trigger: CCCTTCTATCAGCATGTACAACACACAAGAGGGGCT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CAA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCTTGTATCCCTGGCATaGTTCAGAAGCCCCTATTTG +
Preference number: 5 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPLVSLA*FRSPYL
Trigger: CAAATAGGGGCTTCTGAACAATGCCAGGGATACAAG...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTCTTGTATCCCTGGCATaGTTCAGAAGCCCCTATTTG +
Preference number: 5 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCLVSLA*FRSPYL
Trigger: CAAATAGGGGCTTCTGAACAATGCCAGGGATACAAG...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCTCTCTGTAGGGCTCTaGTGTGTTGTACATGCTGAT +
Preference number: 5 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPLSVGL*CVVHAD
Trigger: ATCAGCATGTACAACACACAAGAGCCCTACAGAGAG...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTCTCTCTGTAGGGCTCTaGTGTGTTGTACATGCTGAT +
Preference number: 5 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCLSVGL*CVVHAD
Trigger: ATCAGCATGTACAACACACAAGAGCCCTACAGAGAG...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CTCGTGGTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCAATGAAGTCATCTTaGGACGAATACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LVVKGRGVIQDDGVIFTPAMKSS*DEYSVR
Trigger: CCTGACAGAGTATTCGTCCAAAGATGACTTCATTGC...GGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAACCACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTATTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAATTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAACACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLEHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATAGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVIVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTGGGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: CRSSVCSSVSRGKKLSLWVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...CCACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 5 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTATGCTGATAGAAGGGTaGTTACAGACCGCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSMLIEG*LQTAGS
Trigger: GGAACCGGCGGTCTGTAACAACCCTTCTATCAGCAT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CAA 90 bp GTGAATGAGTTCCAGGCCCAGACTCTCCTCGTGGTTAAAGGACGCGGCGTCATCCTTGTATCCCTGGCATaGTTCAGAAGCCCCTATTTG +
Preference number: 5 (lower is better)
Translates to: VNEFQAQTLLVVKGRGVILVSLA*FRSPYL
Trigger: CAAATAGGGGCTTCTGAACAATGCCAGGGATACAAG...GATGACGCCGCGTCCTTTAACCACGAGGAGAGTCTGGGCCTGGAACTCATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GCTGTAATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAACTTGTATCCCTGGCATaGTTCAGAAGCCCCTATTTG +
Preference number: 5 (lower is better)
Translates to: AVMVWLVVIRGVNPRGQQLVSLA*FRSPYL
Trigger: CAAATAGGGGCTTCTGAACAATGCCAGGGATACAAG...TTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATTACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: TMNRYVILFSSASMAGQHKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp TGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCTATGTTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: CRCPRGGQTAQSALLTPMLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...CATAGGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GCTTGTGTTTCTCACAGCTATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: ACVSHSYSRCGELRLRVTPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...GGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGTGAGAAACACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GCGGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: AGPLEVPSGEAPSLLGGTFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...AGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCCTGTGCGGTGACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGATTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: PCAVTAGLLCARRLAEGRFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...TCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGTCACCGCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: RGPIFVRRNYESVAAAAPFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...GGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GTAGTGCAGGTGCCCACGTGGGGGTCAGACTGCTCAGTCAGCACTTTTAACTCCCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: VVQVPTWGSDCSVSTFNSHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...GGAGTTAAAAGTGCTGACTGAGCAGTCTGACCCCCACGTGGGCACCTGCACTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGLERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCLERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKKCAGP*EVPSGE
Trigger: CTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTT...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGCCATGGCTCCTCTGTaGAGCGATGCTGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEAMAPL*SDAELF
Trigger: AAACAGCTCAGCATCGCTCAACAGAGGAGCCATGGC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CAA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAGCCATGGCTCCTCTGTaGAGCGATGCTGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLAMAPL*SDAELF
Trigger: AAACAGCTCAGCATCGCTCAACAGAGGAGCCATGGC...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGCCATGGCTCCTCTGTaGAGCGATGCTGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIAMAPL*SDAELF
Trigger: AAACAGCTCAGCATCGCTCAACAGAGGAGCCATGGC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGATGCTGATAGAAGGGTaGTTACAGACCGCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLMLIEG*LQTAGS
Trigger: GGAACCGGCGGTCTGTAACAACCCTTCTATCAGCAT...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAGCCCCTCTTGTGTGTaGTACATGCTGATAGAAGGG +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSSPSCV*YMLIEG
Trigger: CCCTTCTATCAGCATGTACAACACACAAGAGGGGCT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CAA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCATTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSAFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTACAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: SRCGELRLRVTMNRYVILPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: PLRRGPIFVRRNYESVAALPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...AGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTATTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GTTAAAGGACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: VKGRGVIQDDGVIFTPAANEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...GGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGTCCTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SRCGELRLRVTMNRYVILGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 5 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGACTCTCTGTAGGGCTCTaGTGTGTTGTACATGCTGAT +
Preference number: 5 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGLSVGL*CVVHAD
Trigger: ATCAGCATGTACAACACACAAGAGCCCTACAGAGAG...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AATGGTGTGGCTGGTGGTTATCCGTGGAGTAAACCCTCGGGGGCAGCAAGGGAGCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: NGVAGGYPWSKPSGAAREQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...CTCCCTTGCTGCCCCCGAGGGTTTACTCCACGGATAACCACCAGCCACACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCCATCTTTGTTAGGAGGAACTATGAATCCGTCGCTGCTGCCGCGCCCCAGCTGCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: PIFVRRNYESVAAAAPQLQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...CAGCTGGGGCGCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAATTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLELPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGTTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQESSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAISSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GGGTCCTTTGGAAGTCCCCTCCGGAGAGGCCCCATCTTTGTTAGGAGGAACTATCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: GSFGSPLRRGPIFVRRNYLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...ATAGTTCCTCCTAACAAAGATGGGGCCTCTCCGGAGGGGACTTCCAAAGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ACGCGGCGTCATCCAGGACGATGGCGTCATCTTCACTCCCGCTGCCTAAGTTGTAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: TRRHPGRWRHLHSRCLSCNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...ACAACTTAGGCAGCGGGAGTGAAGATGACGCCATCGTCCTGGATGACGCCGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: SRCGELRLRVTMNRYVILVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGATTGGGGCACAGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: RLGHRRSSAVSFLPWADLKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...TAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCTGTGCCCCAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTACCCATGACTTGATATaGTCAAGACAGCCTGATTCA +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRTHDLI*SRQPDS
Trigger: TGAATCAGGCTGTCTTGACAATATCAAGTCATGGGT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000117407.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000119385.8
ENSMUST00000120144.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAACTTGTATCCCTGGCATaGTTCAGAAGCCCCTATTTG +
Preference number: 5 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLELVSLA*FRSPYL
Trigger: CAAATAGGGGCTTCTGAACAATGCCAGGGATACAAG...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACGCAATGAAGTCATCTTaGGACGAATACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHAMKSS*DEYSVR
Trigger: CCTGACAGAGTATTCGTCCAAAGATGACTTCATTGC...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTATTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGATTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp CCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PRVIFYRLVTKCAGPLEVQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...GACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp ATCATATTCCGGTTCTGTTCGCTGGAGCGCTCGTGGTTGTTCAGGTATGAAGGGCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: IIFRFCSLERSWLFRYEGRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...CCCTTCATACCTGAACAACCACGAGCGCTCCAGCGAACAGAACCGGAATATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CATCCCCGTGTCATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAACGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: HPRVIFYRLVTKCAGPLERSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...TTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGATGACACGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: RLRMVHQVLAVLLVAIPVNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...CACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQETNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAITNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCCTATAACCCATGACTaGATGAAGGGTCTGTTATCC +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLPITHD*MKGLLS
Trigger: GGATAACAGACCCTTCATCAAGTCATGGGTTATAGG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
CDS-3UTR CAA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGCCTATAACCCATGACTaGATGAAGGGTCTGTTATCC +
Preference number: 5 (lower is better)
Translates to: SRCGELRLRVTMNRYVILPITHD*MKGLLS
Trigger: GGATAACAGACCCTTCATCAAGTCATGGGTTATAGG...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000120128.8
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACTTGTATCCCTGGCATaGTTCAGAAGCCCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLVSLA*FRSPFV
Trigger: GACAAAGGGGCTTCTGAACAATGCCAGGGATACAAG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCAAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCTTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEKCAGP*EVPSGE
Trigger: CTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: QQGHNERHFLLISFINIMKCAGP*EVPSGE
Trigger: CTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTT...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTAAGTGCGCGGGTCCTTaGGAAGTCCCCTCCGGAGAG +
Preference number: 5 (lower is better)
Translates to: GHNERHFLLISFINIMKSKCAGP*EVPSGE
Trigger: CTCTCCGGAGGGGACTTCCAAAGGACCCGCGCACTT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATCTTCTATAGACTAGTGACCAAGTGCGCGGGTCCTTTGGAAGTCCCCTCCGGACCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: IFYRLVTKCAGPLEVPSGPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...TCCGGAGGGGACTTCCAAAGGACCCGCGCACTTGGTCACTAGTCTATAGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000119385.8
ENSMUST00000120144.8
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000117407.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000119385.8
ENSMUST00000120144.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCACTGGGTTCTGTTATaGCATCATGAACTACAGGTG +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLHWVLL*HHELQV
Trigger: CACCTGTAGTTCATGATGCAATAACAGAACCCAGTG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
CDS-3UTR CAA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATGCAATGAAGTCATCTTaGGACGAATACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHAMKSS*DEYSVR
Trigger: CCTGACAGAGTATTCGTCCAAAGATGACTTCATTGC...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp ACTGCAGGTCTTCTGTGTGCTCGTCGGTTAGCAGAGGGAAGAAGCTCTCGCTGTCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: TAGLLCARRLAEGRSSRCQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...ACAGCGAGAGCTTCTTCCCTCTGCTAACCGACGAGCACACAGAAGACCTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCACAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: LRMVHQVLAVLLVAIPVSQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...TGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTTCCATAGCTGGGATTaGGGAGGCTGCCGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEFHSWD*GGCRGQ
Trigger: CTGCCCTCGGCAGCCTCCCAAATCCCAGCTATGGAA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTAAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQERSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: QQGHNERHFLLISFINIMGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGGTGGCCGCACGCAGTaGATCACTTGTCGTCAGGTC +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEGGRTQ*ITCRQV
Trigger: GACCTGACGACAAGTGATCAACTGCGTGCGGCCACC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGGTGCCCACCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: LSLGGSEFPLTTGSAGAHLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...GTGGGCACCTGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: SRCGELRLRVTMNRYVILFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...CAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: PLLLSTQNGPPGVSSPVGFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...ACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: STQNGPPGVSSPVGCHPRNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...ACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: QVASDHESLCDTVQLCFYGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...ATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCCTATAACCCATGACTaGATGAAGGGTCTGTTATCC +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEPITHD*MKGLLS
Trigger: GGATAACAGACCCTTCATCAAGTCATGGGTTATAGG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
CDS-3UTR CAA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATTTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000117407.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000119385.8
ENSMUST00000120144.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGCCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: DHCFYRLRMVHQVLAVLLPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...CAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000117407.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000119385.8
ENSMUST00000120144.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACTCTCTGTAGGGCTCTaGTGTGTTGTACATGCTGAT +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLLSVGL*CVVHAD
Trigger: ATCAGCATGTACAACACACAAGAGCCCTACAGAGAG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: LSTQNGPPGVSSPVGCHPQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...GGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: TMNRYVILFSSASMAGQHQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: ELRLRVTMNRYVILFSSARSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTGGTGATGAACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: LVMNCLPNMLCNTTYVPRPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...CCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTTCATCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAILPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQELPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: RMVHQVLAVLLVAIPVSSNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...AGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTACATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: ELRLRVTMNRYVILFSSAHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCACTTGTATCCCTGGCATaGTTCAGAAGCCCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSALVSLA*FRSPFV
Trigger: GACAAAGGGGCTTCTGAACAATGCCAGGGATACAAG...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 5 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHLERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTLERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: LLLSTQNGPPGVSSPVGCKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...GCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTATTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGACCCATGACTTGATATaGTCAAGACAGCCTGATTCA +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQETHDLI*SRQPDS
Trigger: TGAATCAGGCTGTCTTGACAATATCAAGTCATGGGT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000117407.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000120144.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCACCCATGACTTGATATaGTCAAGACAGCCTGATTCA +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAITHDLI*SRQPDS
Trigger: TGAATCAGGCTGTCTTGACAATATCAAGTCATGGGT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000117407.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000119385.8
ENSMUST00000120144.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACACCCATGACTTGATATaGTCAAGACAGCCTGATTCA +
Preference number: 5 (lower is better)
Translates to: TMNRYVILFSSASMAGQHTHDLI*SRQPDS
Trigger: TGAATCAGGCTGTCTTGACAATATCAAGTCATGGGT...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117407.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000117407.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000119385.8
ENSMUST00000120144.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTACCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000119385.8
ENSMUST00000120144.8
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGCCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQEPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000117407.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000120144.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAAGCCCCTCTTGTGTGTaGTACATGCTGATAGAAGGG +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKSPSCV*YMLIEG
Trigger: CCCTTCTATCAGCATGTACAACACACAAGAGGGGCT...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS GCA 90 bp GTATTTATATGTTCCCGGACATGGGTCTGGAAATACATCAGGACCTaGCACCACTGCACACTGGGTTCTGTTATTGCATCTTTGAGACAT +
Preference number: 5 (lower is better)
Translates to: VFICSRTWVWKYIRT*HHCTLGSVIASLRH
Trigger: ATGTCTCAAAGATGCAATAACAGAACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTTCCAGACCCATGTCCGGGAACATATAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117253.8
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTAAGTCTATGTCGGACTaGCCACCCCATCGGTATGGG +
Preference number: 5 (lower is better)
Translates to: GHNERHFLLISFINIMKSKSMSD*PPHRYG
Trigger: CCCATACCGATGGGGTGGCAAGTCCGACATAGACTT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTTGCCTATGTTCCAGGTaGTGGTCCGGAGGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: GWYDMLNGYDYVADALKLCLCSR*WSGGWC
Trigger: GCACCACCCTCCGGACCACAACCTGGAACATAGGCA...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTACAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: ELRLRVTMNRYVILFSSALPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: RRSSAVSFLPWADLKIQVFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...AACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTAACTGTTGCCATGAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: LHTVAQVFAASNAVTVAMNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...CATGGCAACAGTTACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ACCTTTCAACTCTCACTAGGAGGGAGTGAATTTCCTCTAACAACTGGTAGTGCAGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: TFQLSLGGSEFPLTTGSAVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...TGCACTACCAGTTGTTAGAGGAAATTCACTCCCTCCTAGTGAGAGTTGAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTTCTATGGCTGGGCAGCACAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: TMNRYVILFSSASMAGQHKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...GTGCTGCCCAGCCATAGAAGCAGAGCTGAACAGTATCACATAGCGATTCATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAATGCTGATAGAAGGGTaGTTACAGACCGCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGMLIEG*LQTAGS
Trigger: GGAACCGGCGGTCTGTAACAACCCTTCTATCAGCAT...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAAGCAATGAAGTCATCTTaGGACGAATACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKAMKSS*DEYSVR
Trigger: CCTGACAGAGTATTCGTCCAAAGATGACTTCATTGC...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAIQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCACGCAGTTGATCACTaGTCGTCAGGTCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFHAVDH*SSGLSR
Trigger: CCTGGAGAGACCTGACGACAAGTGATCAACTGCGTG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp TTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATCAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: FYRLRMVHQVLAVLLVAINEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...GATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CCAGGTGTTAGCAGTCCTGTTGGTTGCCATCCCCGTGTCATCTTCTATAGACTAAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: PGVSSPVGCHPRVIFYRLNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...TAGTCTATAGAAGATGACACGGGGATGGCAACCAACAGGACTGCTAACACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp ATAATGAAGTCTCCATCTGAGGGGAAAGGACTGGGAAAGATTGGGGCACAGGAGAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: IMKSPSEGKGLGKIGAQENEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...CTCCTGTGCCCCAATCTTTCCCAGTCCTTTCCCCTCAGATGGAGACTTCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CTTCTATCGACTCAGAATGGTCCACCAGGTGTTAGCAGTCCTGTTGGTTGCCATAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: LLSTQNGPPGVSSPVGCHNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...ATGGCAACCAACAGGACTGCTAACACCTGGTGGACCATTCTGAGTCGATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: KHNITQQGHNERHFLLISGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAACTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 5 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKLERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCTGGAGCGCTCGTGGTaGTTCAGGTATGAAGGGATA +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSELERSW*FRYEGI
Trigger: TATCCCTTCATACCTGAACAACCACGAGCGCTCCAG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGTACACACGATGACCACTGCTTCTATCGACTCAGAATGGTCCACCAGGTGTTAAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: STHDDHCFYRLRMVHQVLKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...TAACACCTGGTGGACCATTCTGAGTCGATAGAAGCAGTGGTCATCGTGTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GGTCTCGTTGTGGTTATAGCCACGGTCTATAATTTGCACACAGTTGCTCAGGTACCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: GLVVVIATVYNLHTVAQVPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGCTATAACCACAACGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000119385.8
ENSMUST00000120144.8
CDS-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTATGCTGATAGAAGGGTaGTTACAGACCGCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: GHNERHFLLISFINIMKSMLIEG*LQTAGS
Trigger: GGAACCGGCGGTCTGTAACAACCCTTCTATCAGCAT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS-3UTR CAA 90 bp TATTCCCGCTGTGGTGAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: YSRCGELRLRVTMNRYVIQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...TATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp ACGGTCTATAATTTGCACACAGTTGCTCAGGTATTCGCCGCCAGCAATGCTGTACAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: TVYNLHTVAQVFAASNAVQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...TACAGCATTGCTGGCGGCGAATACCTGAGCAACTGTGTGCAAATTATAGACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGATTACCGGTGGCCTCGTaGTCATCATCCTCATATACA +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGLPVAS*SSSSYT
Trigger: TGTATATGAGGATGATGACAACGAGGCCACCGGTAA...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAACAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKSSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAGCTCAGCAGTTAGCTTTCTCCCCTGGGCTGACCTAAAAATTCAAGTTAAATTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: RSSAVSFLPWADLKIQVKFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...TTTAACTTGAATTTTTAGGTCAGCCCAGGGGAGAAAGCTAACTGCTGAGCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAACTCAGGTTGCGAGTGACCATGAATCGCTATGTGATACTGTTCAGCTCTGCTAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: ELRLRVTMNRYVILFSSANEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...AGCAGAGCTGAACAGTATCACATAGCGATTCATGGTCACTCGCAACCTGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGTCGACAGCCTTGTGTaGACCAATAACCTGTCATTG +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGVDSLV*TNNLSL
Trigger: CAATGACAGGTTATTGGTCAACACAAGGCTGTCGAC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAGTAGTATGTGTCTTGTaGGTTGTCAGGAGTCGACAG +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGVVCVL*VVRSRQ
Trigger: CTGTCGACTCCTGACAACCAACAAGACACATACTAC...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACACATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGCTTGTATCCCTGGCATaGTTCAGAAGCCCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: QQGHNERHFLLISFINIMLVSLA*FRSPFV
Trigger: GACAAAGGGGCTTCTGAACAATGCCAGGGATACAAG...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGCACTTTTAACTCCTATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCCCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: STFNSYGIQHFTCRSPSSPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...GCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATAGGAGTTAAAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTCCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAAAGCTCTCTGGCAATATaGGCAGCTGTTTCTCCGGAT +
Preference number: 5 (lower is better)
Translates to: RNRKQTICAMLVSVHYIESSLAI*AAVSPD
Trigger: ATCCGGAGAAACAGCTGCCAATATTGCCAGAGAGCT...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACATTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: GHNERHFLLISFINIMKSTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TTCTGGAGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACCCTATAACCCATGACTaGATGAAGGGTCTGTTATCC +
Preference number: 5 (lower is better)
Translates to: FWRNRKQTICAMLVSVHYPITHD*MKGLLS
Trigger: GGATAACAGACCCTTCATCAAGTCATGGGTTATAGG...GTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCTCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
CDS-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTGCCACGGTCTATAATTaGCACACAGTTGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GHNERHFLLISFINIMKSATVYN*HTVAQV
Trigger: TACCTGAGCAACTGTGTGCAAATTATAGACCGTGGC...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGGGAGAGGCCCCATCTTaGTTAGGAGGAACTATGAAT +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEGEAPS*LGGTMN
Trigger: ATTCATAGTTCCTCCTAACAAAGATGGGGCCTCTCC...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp TATGGAATACAGCATTTCACATGCAGAAGCCCGTCTAGCTCTATAGACACCTCTCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: YGIQHFTCRSPSSSIDTSQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...AGAGGTGTCTATAGAGCTAGACGGGCTTCTGCATGTGAAATGCTGTATTCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: GHNERHFLLISFINIMKSRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTCCAGGCATTCAAAGCTaGTGGCTGAAGGAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: GWYDMLNGYDYVADALKLPGIQS*WLKEVV
Trigger: AACAACCTCCTTCAGCCACAAGCTTTGAATGCCTGG...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGLPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTACCAATAACCTGTCATaGTGCGCTTGGAATAGCTCC +
Preference number: 5 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFTNNLS*CAWNSS
Trigger: GGAGCTATTCCAAGCGCACAATGACAGGTTATTGGT...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTGGTTGGTCGGTTCTGTaGATTCCAATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GWYDMLNGYDYVADALKLGWSVL*IPIRKS
Trigger: GCTCTTCCTGATTGGAATCAACAGAACCGACCAACC...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCTATAACCCATGACTaGATGAAGGGTCTGTTATCC +
Preference number: 5 (lower is better)
Translates to: GHNERHFLLISFINIMKSPITHD*MKGLLS
Trigger: GGATAACAGACCCTTCATCAAGTCATGGGTTATAGG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCCTATAACCCATGACTaGATGAAGGGTCTGTTATCC +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEPITHD*MKGLLS
Trigger: GGATAACAGACCCTTCATCAAGTCATGGGTTATAGG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGAACCCATGACTTGATATaGTCAAGACAGCCTGATTCA +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGTHDLI*SRQPDS
Trigger: TGAATCAGGCTGTCTTGACAATATCAAGTCATGGGT...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTGCAATGAAGTCATCTTaGGACGAATACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFAMKSS*DEYSVR
Trigger: CCTGACAGAGTATTCGTCCAAAGATGACTTCATTGC...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GHNERHFLLISFINIMKSQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCGTTCAAGTGATTTCTaGTCTGTTCTGCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFRSSDF*SVLLAL
Trigger: GAGAGCTAGCAGAACAGACAAGAAATCACTTGAACG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGCTTCCGTGCTCAGTCTaGCAACTTCTAACTGAATAT +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSELPCSV*QLLTEY
Trigger: ATATTCAGTTAGAAGTTGCAAGACTGAGCACGGAAG...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAATTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: KIVRESLFREQHQMSEYTNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...TGTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AAAAATTGTCAGAGAGTCTCTCTTTCGAGAACAGCATCAGATGTCGGAGTACACAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: KNCQRVSLSRTASDVGVHNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...GTGTACTCCGACATCTGATGCTGTTCTCGAAAGAGAGACTCTCTGACAATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTCATGTAGTATGTGTCTaGTTGGTTGTCAGGAGTCGA +
Preference number: 5 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFHVVCV*LVVRSR
Trigger: TCGACTCCTGACAACCAACAAGACACATACTACATG...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp AAACACAACATAACTCAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: KHNITQQGHNERHFLLISKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...CGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTGAGTTATGTTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000119788.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCTTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AGGAACAGAAAGCAGACTATATGCGCAATGCTAGTATCTGTACATTACATAGAATTCTGGAGCCCAGGTTaGGCATGCTTTTGTAGTAAA +
Preference number: 5 (lower is better)
Translates to: RNRKQTICAMLVSVHYIEFWSPG*ACFCSK
Trigger: TTTACTACAAAAGCATGCCAAACCTGGGCTCCAGAA...TTCTATGTAATGTACAGATACTAGCATTGCGCATATAGTCTGCTTTCTGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGACCCATGACTTGATATaGTCAAGACAGCCTGATTCA +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSETHDLI*SRQPDS
Trigger: TGAATCAGGCTGTCTTGACAATATCAAGTCATGGGT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000117407.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000120144.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTACCCATGACTTGATATaGTCAAGACAGCCTGATTCA +
Preference number: 5 (lower is better)
Translates to: GHNERHFLLISFINIMKSTHDLI*SRQPDS
Trigger: TGAATCAGGCTGTCTTGACAATATCAAGTCATGGGT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000117407.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000120144.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTCTCTCTGTAGGGCTCTaGTGTGTTGTACATGCTGAT +
Preference number: 5 (lower is better)
Translates to: GWYDMLNGYDYVADALKLLSVGL*CVVHAD
Trigger: ATCAGCATGTACAACACACAAGAGCCCTACAGAGAG...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp GCGGTAGAAAATAAAGTGGGCATGTTTGCAATGGGACACATGTTTAATGATGGACAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: AVENKVGMFAMGHMFNDGQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...TCCATCATTAAACATGTGTCCCATTGCAAACATGCCCACTTTATTTTCTACCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTTTTGCTTTAATGTGTTaGCTGAGAGCTGGATGGTAC +
Preference number: 5 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFFALMC*LRAGWY
Trigger: GTACCATCCAGCTCTCAGCAAACACATTAAAGCAAA...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGAAGTTGTTCACCAGTTaGTTCATCATATTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSEKLFTS*FIIFRF
Trigger: GAACCGGAATATGATGAACAAACTGGTGAACAACTT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000119788.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAACAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp CAACAAGGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGCAAATCATGAATGCATaGGAAGCTGACCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: QQGHNERHFLLISFINIMQIMNA*EADLLS
Trigger: TGATAAAAGGTCAGCTTCCAATGCATTCATGATTTG...CATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCCTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000121707.8
CDS-3UTR CAA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTCAAGACATAGGTAAGTaGATACACCTATGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GWYDMLNGYDYVADALKLQDIGK*IHLWFL
Trigger: CAGGAACCATAGGTGTATCAACTTACCTATGTCTTG...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp GAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTCCATCTGAGAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: ERHFLLISFINIMKSPSENEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...CTCAGATGGAGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GGCCACAATGAGCGCCATTTTCTTCTTATCTCGTTCATTAACATAATGAAGTCTAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: GHNERHFLLISFINIMKSNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...AGACTTCATTATGTTAATGAACGAGATAAGAAGAAAATGGCGCTCATTGTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AACTGCTTGCCAAATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: NCLPNMLCNTTYVPRKHKNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...TTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATATTTGGCAAGCAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp GGCTGGTATGATATGTTAAACGGTTATGATTATGTTGCTGATGCATTGAAACTTCCTATAACCCATGACTaGATATTGTCAAGACAGCCT +
Preference number: 5 (lower is better)
Translates to: GWYDMLNGYDYVADALKLPITHD*ILSRQP
Trigger: AGGCTGTCTTGACAATATCAAGTCATGGGTTATAGG...AAGTTTCAATGCATCAGCAACATAATCATAACCGTTTAACATATCATACCAGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS-3UTR CAA 90 bp ATATGCTTTGCAATACAACATATGTGCCCCGGAAACATAAAATTTGTCCTGTTCAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: ICFAIQHMCPGNIKFVLFNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...GAACAGGACAAATTTTATGTTTCCGGGGCACATATGTTGTATTGCAAAGCATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000120128.8
ENSMUST00000121707.8
ENSMUST00000124117.2
CDS-3UTR CAA 90 bp AATGCATTTGGTATTGTGGTTAAAGCAGCGGTAGAAAATAAAGTGGGCATGTTTAATGAACAGTTAGGGTaGAAATTTTCTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: NAFGIVVKAAVENKVGMFNEQLG*KFSSDC
Trigger: GCAGTCAGAAGAAAATTTCAACCCTAACTGTTCATT...AAACATGCCCACTTTATTTTCTACCGCTGCTTTAACCACAATACCAAATGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000117253.8
CDS CCA 72 bp TCTGTGCTCCTGGGGCACCTGGTCCACGGACTCCTCTaGCAGCTCCGCGTGGCCCCTGTCCTCGATGAGCCG +
Preference number: 6 (lower is better)
Translates to: SVLLGHLVHGLL*QLRVAPVLDEP
Trigger: CGGCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCACAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS GCA 72 bp GAAGGAGATGTCTGGGAGGGAGAGCGCCTCCTGGGCTaGGCTCAGCGTGTCGCAGTGGAGCAGCGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: EGDVWEGERLLG*AQRVAVEQRGL
Trigger: CAGCCCTCGCTGCTCCACTGCGACACGCTGAGCGCAGCCCAGGAGGCGCTCTCCCTCCCAGACATCTCCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS CAA 90 bp GGACTCCTCTGGCAGCTCCGCGTGGCCCCTGTCCTCGATGAGCCGTaGAGCGCTCTGCCGCTGGCTGCTGAAGGAGATGTCTGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: GLLWQLRVAPVLDEP*SALPLAAEGDVWEG
Trigger: TCCCTCCCAGACATCTCCTTCAGCAGCCAGCGGCAGAGCGCTCAACGGCTCATCGAGGACAGGGGCCACGCGGAGCTGCCAGAGGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS TCA 72 bp GGCAGCTCCGCGTGGCCCCTGTCCTCGATGAGCCGTTaGGCGCTCTGCCGCTGGCTGCTGAAGGAGATGTCT +
Preference number: 6 (lower is better)
Translates to: GSSAWPLSSMSR*ALCRWLLKEMS
Trigger: AGACATCTCCTTCAGCAGCCAGCGGCAGAGCGCTCAACGGCTCATCGAGGACAGGGGCCACGCGGAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS CCA 72 bp TTGAGCGCTCTGCCGCTGGCTGCTGAAGGAGATGTCTaGGAGGGAGAGCGCCTCCTGGGCTGCGCTCAGCGT +
Preference number: 6 (lower is better)
Translates to: LSALPLAAEGDV*EGERLLGCAQR
Trigger: ACGCTGAGCGCAGCCCAGGAGGCGCTCTCCCTCCCAGACATCTCCTTCAGCAGCCAGCGGCAGAGCGCTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS CCA 72 bp GGCGCGGCTGAAAGCTTGGGCTGCAATCTGTGCTCCTaGGGCACCTGGTCCACGGACTCCTCTGGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GAAESLGCNLCS*GTWSTDSSGSS
Trigger: GGAGCTGCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS CAA 90 bp CTCTCTGCGGACCACTGCCATGGGAATTGGGGCGCGGCTGAAAGCTaGGGCTGCAATCTGTGCTCCTGGGGCACCTGGTCCACGGACTCC +
Preference number: 6 (lower is better)
Translates to: LSADHCHGNWGAAES*GCNLCSWGTWSTDS
Trigger: GGAGTCCGTGGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS TCA 72 bp CTCTGCGGACCACTGCCATGGGAATTGGGGCGCGGCTaGAAGCTTGGGCTGCAATCTGTGCTCCTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: LCGPLPWELGRG*KLGLQSVLLGH
Trigger: GTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTCCCATGGCAGTGGTCCGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS GCA 72 bp AATTGGGGCGCGGCTGAAAGCTTGGGCTGCAATCTGTaGTCCTGGGGCACCTGGTCCACGGACTCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: NWGAAESLGCNL*SWGTWSTDSSG
Trigger: GCCAGAGGAGTCCGTGGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS CAA 72 bp GACCACTGCCATGGGAATTGGGGCGCGGCTGAAAGCTaGGGCTGCAATCTGTGCTCCTGGGGCACCTGGTCC +
Preference number: 6 (lower is better)
Translates to: DHCHGNWGAAES*GCNLCSWGTWS
Trigger: GGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTCCCATGGCAGTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS CCA 72 bp ACCACTGCCATGGGAATTGGGGCGCGGCTGAAAGCTTaGGCTGCAATCTGTGCTCCTGGGGCACCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: TTAMGIGARLKA*AAICAPGAPGP
Trigger: TGGACCAGGTGCCCCAGGAGCACAGATTGCAGCCCAAGCTTTCAGCCGCGCCCCAATTCCCATGGCAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS CCA 72 bp GCTGCGCTCAGCGTGTCGCAGTGGAGCAGCGAGGGCTaGATGTCTCTCATTGTGCTTGCCACCATGAACTAC +
Preference number: 6 (lower is better)
Translates to: AALSVSQWSSEG*MSLIVLATMNY
Trigger: GTAGTTCATGGTGGCAAGCACAATGAGAGACATCCAGCCCTCGCTGCTCCACTGCGACACGCTGAGCGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117407.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122356.8
CDS GCA 72 bp AACTGTCTCCACCATCGCCTTGTTCAAGCTGCGGGCTaGGCTGTCTTTTCCCCCTGGTGTCAAATTCCTGAG +
Preference number: 6 (lower is better)
Translates to: NCLHHRLVQAAG*AVFSPWCQIPE
Trigger: CTCAGGAATTTGACACCAGGGGGAAAAGACAGCGCAGCCCGCAGCTTGAACAAGGCGATGGTGGAGACAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124117.2
CDS TCA 72 bp ACCACTGCCATGGGAATTGGGGCGCGGCTGAAAGCATaGACTACAGGTGCTAAAAGCATCGTGAGGATGAGT +
Preference number: 6 (lower is better)
Translates to: TTAMGIGARLKA*TTGAKSIVRMS
Trigger: ACTCATCCTCACGATGCTTTTAGCACCTGTAGTTCATGCTTTCAGCCGCGCCCCAATTCCCATGGCAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000117253.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000122037.8
CDS TCA 72 bp CTTTGTCTCTCTGTAGGGCTCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGTGATGAAGGACGACTC +
Preference number: 6 (lower is better)
Translates to: LCLSVGLSVERC*AVYVSGDEGRL
Trigger: GAGTCGTCCTTCATCACCGGAGACATAAACAGCTCAGCATCGCTCAACAGAGAGCCCTACAGAGAGACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000121707.8
CDS TCA 72 bp ACTTGTCTCTCTGTAGGGCTCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGTGATGAAGGACGACTC +
Preference number: 6 (lower is better)
Translates to: TCLSVGLSVERC*AVYVSGDEGRL
Trigger: GAGTCGTCCTTCATCACCGGAGACATAAACAGCTCAGCATCGCTCAACAGAGAGCCCTACAGAGAGACAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000120128.8
CDS TCA 72 bp CTGCATGCAGGGAAGATATCCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGTGATGAAGGACGACTC +
Preference number: 6 (lower is better)
Translates to: LHAGKISSVERC*AVYVSGDEGRL
Trigger: GAGTCGTCCTTCATCACCGGAGACATAAACAGCTCAGCATCGCTCAACAGAGGATATCTTCCCTGCATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117253.8
ENSMUST00000119788.8
CDS GCA 72 bp TGTTCCCGGACATGGGTCTGGAAATACATCAGGACCTaGCACCACTGCACACTGGGTTCTGTTATTGCATCT +
Preference number: 6 (lower is better)
Translates to: CSRTWVWKYIRT*HHCTLGSVIAS
Trigger: AGATGCAATAACAGAACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTTCCAGACCCATGTCCGGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000036068.15
ENSMUST00000072521.11
ENSMUST00000117253.8
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000118078.8
ENSMUST00000118442.8
ENSMUST00000119385.8
ENSMUST00000119788.8
ENSMUST00000120128.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
ENSMUST00000121707.8
ENSMUST00000122037.8
ENSMUST00000122356.8
CDS GCA 72 bp TGTTCCCGGACATGGGTCTGGAAATACATCAGGACCTaGCACCACTGCACACTGGGTTCTGTTATTGCATCA +
Preference number: 6 (lower is better)
Translates to: CSRTWVWKYIRT*HHCTLGSVIAS
Trigger: TGATGCAATAACAGAACCCAGTGTGCAGTGGTGGCAGGTCCTGATGTATTTCCAGACCCATGTCCGGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132375.8
CDS TCA 72 bp AAGATGATTAGCCATGGCTCCTCTGTTGAGCGATGCTaGGCTGTTTATGTCTCCGGTGATGAAGGACGACTC +
Preference number: 6 (lower is better)
Translates to: KMISHGSSVERC*AVYVSGDEGRL
Trigger: GAGTCGTCCTTCATCACCGGAGACATAAACAGCTCAGCATCGCTCAACAGAGGAGCCATGGCTAATCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS TCA 72 bp GTACCATGCGGACGAAGCAGAGCATTGCTTATAAGATaGTTAGCCATGGCTCCTCTGTTGAGCGATGCTGAG +
Preference number: 6 (lower is better)
Translates to: VPCGRSRALLIR*LAMAPLLSDAE
Trigger: CTCAGCATCGCTCAACAGAGGAGCCATGGCTAATCATCTTATAAGCAATGCTCTGCTTCGTCCGCATGGTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000117407.8
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120144.8
ENSMUST00000120292.8
ENSMUST00000120445.8
ENSMUST00000120673.8
ENSMUST00000121641.8
CDS CAA 72 bp AGCCCCTCTTGTGTGTTGTACATGCTGATAGAAGGGTaGTTACAGACCGCCGGTTCCCCAAGCAATGTATTA +
Preference number: 6 (lower is better)
Translates to: SPSCVLYMLIEG*LQTAGSPSNVL
Trigger: TAATACATTGCTTGGGGAACCGGCGGTCTGTAACAACCCTTCTATCAGCATGTACAACACACAAGAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000117985.8
ENSMUST00000118034.8
ENSMUST00000120673.8
ENSMUST00000121641.8