RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRL2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028184

Ensembl transcript IDs: ENSMUST00000106128.7, ENSMUST00000168352.2, ENSMUST00000195988.5, ENSMUST00000196526.5, ENSMUST00000197348.5, ENSMUST00000197567.5, ENSMUST00000197925.5, ENSMUST00000198139.5, ENSMUST00000198779.5, ENSMUST00000199059.5, ENSMUST00000199238.5, ENSMUST00000199750.5, ENSMUST00000200154.5, ENSMUST00000200216.5, ENSMUST00000200456.2, ENSMUST00000200543.5

Found 1285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTCACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTaGTCTCCGGGTAGGGAGAGTCTCTTAGGTTGGGCATGCTCGTGT +
Preference number: 1 (lower is better)
Translates to: SHSSWRETGPLPCLG*SPGRESLLGWACSC
Trigger: ACACGAGCATGCCCAACCTAAGAGACTCTCCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR TCA 90 bp TTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATGCATCAAAGATaGGGCGTCAGCCACAATCGCGTCATCTTCACTGCTGCTGCCGCC +
Preference number: 1 (lower is better)
Translates to: FVAELQPWVVTMHQR*GVSHNRVIFTAAAA
Trigger: GGCGGCAGCAGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR GCA 90 bp CCATGGGCCAACAGAGCCGAGTCTTCTGGCCGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATG +
Preference number: 1 (lower is better)
Translates to: PWANRAESSGRVGGS*RAPLAASLSINTCM
Trigger: CATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACTCGGCTCTGTTGGCCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR GCA 90 bp GCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCAGCCACAATCGCGTCATCTTCACTG +
Preference number: 1 (lower is better)
Translates to: ASSSLWRNSSPGLSP*IKDEASATIASSSL
Trigger: CAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 90 bp AATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAGAGCCGAGTCTTCTGGCCGAGTTGG +
Preference number: 1 (lower is better)
Translates to: NSQDCEVQSDPFYYK*RTMGQQSRVFWPSW
Trigger: CCAACTCGGCCAGAAGACTCGGCTCTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR TCA 90 bp CGCCGTCTACAGTGGGAAATCAACAACGATGGGCAGAGGTCACCATaGTGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAG +
Preference number: 1 (lower is better)
Translates to: RRLQWEINNDGQRSP*WVEEETLPILCNQE
Trigger: CTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGTTGATTTCCCACTGTAGACGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 90 bp TACAGTGGGAAATCAACAACGATGGGCAGAGGTCACCATGATGGGTaGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACA +
Preference number: 1 (lower is better)
Translates to: YSGKSTTMGRGHHDG*KKKLCLFCATKSST
Trigger: TGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGTTGATTTCCCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 90 bp AGGGTTCCTAAGCAGAGGGGGAGATGGGATTGGAAAGGACCACCTTaGTCGAGTCTATTGCTTAACATACATAAAAGTGCACGTTACTAC +
Preference number: 1 (lower is better)
Translates to: RVPKQRGRWDWKGPP*SSLLLNIHKSARYY
Trigger: GTAGTAACGTGCACTTTTATGTATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCTCTGCTTAGGAACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR TCA 90 bp CTTATACTTATGCTTGCATTCTTATACGTAACTATGGTTACAGTCTaGGGGTTCCTAAGCAGAGGGGGAGATGGGATTGGAAAGGACCAC +
Preference number: 1 (lower is better)
Translates to: LILMLAFLYVTMVTV*GFLSRGGDGIGKDH
Trigger: GTGGTCCTTTCCAATCCCATCTCCCCCTCTGCTTAGGAACCCTCAGACTGTAACCATAGTTACGTATAAGAATGCAAGCATAAGTATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR GCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTaGCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAA +
Preference number: 1 (lower is better)
Translates to: TTMGRGHHDGWKKKL*LFCATKSSTQYFLQ
Trigger: TTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 90 bp ACTCTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCTACAGTGGGAAATCAACAACGATGG +
Preference number: 1 (lower is better)
Translates to: TLLAIRNLNVRKGTK*PQQTPSTVGNQQRW
Trigger: CCATCGTTGTTGATTTCCCACTGTAGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR GCA 90 bp TTCTTCTCACTGCAAAGGATAAGCAGGCCAACTTATACTTATGCTTaGATTCTTATACGTAACTATGGTTACAGTCTGAGGGTTCCTAAG +
Preference number: 1 (lower is better)
Translates to: FFSLQRISRPTYTYA*ILIRNYGYSLRVPK
Trigger: CTTAGGAACCCTCAGACTGTAACCATAGTTACGTATAAGAATGCAAGCATAAGTATAAGTTGGCCTGCTTATCCTTTGCAGTGAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR TCA 90 bp CTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTaGAGCCTACGTCTTGTATATAATACAATGCAGGCCTACAGAAAA +
Preference number: 1 (lower is better)
Translates to: LVRKSKIQSICPTGS*SLRLVYNTMQAYRK
Trigger: TTTTCTGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTCGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVRVGGS*RAPLAA
Trigger: CGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCG...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CAA 90 bp CAAGTGGAGAACCATGGGCCAACAGAGCCGAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: QVENHGPTEPSLLAE*EGAAGPHWQRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACTCGGCTCTGTTGGCCCATGGTTCTCCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CAA 90 bp ATGAGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGATGAGGCGTCAGCCACAATCGCGTCA +
Preference number: 2 (lower is better)
Translates to: MSGASSSLWRNSSPG*SPCIKDEASATIAS
Trigger: TGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAGTGAGAAGTGCCCGGTaGCCCCTTCGCCCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGVRSAR*PLRPLF
Trigger: GAACAGAGGGCGAAGGGGTCACCGGGCACTTCTCAC...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CAA 90 bp CTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTaGTGGGTTTTGTTGCCGCCCCGGAGGTTGTTGTGCACTAACTCT +
Preference number: 2 (lower is better)
Translates to: LLPPITGLTGSLSSK*WVLLPPRRLLCTNS
Trigger: AGAGTTAGTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CAA 90 bp TCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTaGAGCTCCAAGTTGTGGGTTTTGTTGCCGCCCCGGAGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: SSSLLLPPITGLTGS*SSKLWVLLPPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp GAGCTTGAGCTCCAAGTTGTGGGTTTTGTTGCCGCCCCGGAGGTTGTTGTGCACGCTGCAGGGCCCCACTaGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: ELELQVVGFVAAPEVVVHAAGPH*QRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC...GTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTCGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCRVGGS*RAPLAA
Trigger: CGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCG...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 2 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGCTGCAGGGCCCCACTaGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQAAGPH*QRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCGCTGCAGGGCCCCACTaGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: AARNMAGREGLLFVLQSLAAGPH*QRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAAGGGGGAGATGGGATTaGAAAGGACCACCTTGGTCG +
Preference number: 2 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGRGRWD*KGPPWS
Trigger: CGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR-3UTR CCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 2 (lower is better)
Translates to: AARNMAGREGLLFVLQSLLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATCGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYRVGGS*RAPLAA
Trigger: CGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCG...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTGGGCAGAGGTCACCATaGTGGGTGGAAGAAGAAACT +
Preference number: 2 (lower is better)
Translates to: TAARNMAGREGLLFVLQSGQRSP*WVEEET
Trigger: AGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCC...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAACTATGGTTACAGTCTaGGGGTTCCTAAGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGTMVTV*GFLSRG
Trigger: CCCTCTGCTTAGGAACCCTCAGACTGTAACCATAGT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR-3UTR TCA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCCGGGCATTGTTCAGTaGATGTCATTATGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRPGIVQ*MSLCLS
Trigger: AGACAGACATAATGACATTCACTGAACAATGCCCGG...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200456.2
3UTR-3UTR GCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 2 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCT +
Preference number: 2 (lower is better)
Translates to: KEHGREGGSLVCFTISLHRKGTK*PQQTPS
Trigger: AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCT...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCT +
Preference number: 2 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLRKGTK*PQQTPS
Trigger: AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCT +
Preference number: 2 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTRKGTK*PQQTPS
Trigger: AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCT...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCATAAGGCCTGTGGCTTaGTTGCTACTGGTTCGACAT +
Preference number: 2 (lower is better)
Translates to: AARNMAGREGLLFVLQSLIRPVA*LLLVRH
Trigger: ATGTCGAACCAGTAGCAATCAAGCCACAGGCCTTAT...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAAGTGAGAAGTGCCCGGTaGCCCCTTCGCCCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKVRSAR*PLRPLF
Trigger: GAACAGAGGGCGAAGGGGTCACCGGGCACTTCTCAC...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGACGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGRVGGS*RAPLAA
Trigger: CGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCG...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 2 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCATCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 2 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTCGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCACAGTTGAGAAGACATaGAATAAGGCCTGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: AARNMAGREGLLFVLQSLTVEKT*NKACGL
Trigger: CAAGCCACAGGCCTTATTTCATGTCTTCTCAACTGT...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAATGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 2 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKRVGGS*RAPLAA
Trigger: CGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCG...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTATTTCCCCACATTTGTaGAAGGCATGGCAGGACTTC +
Preference number: 2 (lower is better)
Translates to: TAARNMAGREGLLFVLQSISPHL*KAWQDF
Trigger: GAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAAT...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAGCTGCAGGGCCCCACTaGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPAAGPH*QRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: TAARNMAGREGLLFVLQSPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTAGGGGGAGATGGGATTaGAAAGGACCACCTTGGTCG +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFRGRWD*KGPPWS
Trigger: CGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR CAA 90 bp CACCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCT +
Preference number: 2 (lower is better)
Translates to: HQLPQGTWPGGRVSC*FYNLSTQQQKRKIP
Trigger: AGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 2 (lower is better)
Translates to: PTAARNMAGREGLLFVLQALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 2 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 2 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGGAAGTGCAAACGGGTaGAGAATCTCTCTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKGSANG*RISLLL
Trigger: AAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAGGAAGTGCAAACGGGTaGAGAATCTCTCTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTGSANG*RISLLL
Trigger: AAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCC...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACACGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 2 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYISLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAACGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTGTGAGAAGTGCCCGGTaGCCCCTTCGCCCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: LPILCNQELDTIFSPNSFVRSAR*PLRPLF
Trigger: GAACAGAGGGCGAAGGGGTCACCGGGCACTTCTCAC...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAATTTCCCCACATTTGTaGAAGGCATGGCAGGACTTC +
Preference number: 2 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTISPHL*KAWQDF
Trigger: GAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAAT...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATGCTGCAGGGCCCCACTaGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYAAGPH*QRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: LCSRINRGVTQDLQISPHPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: KEHGREGGSLVCFTISLHPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTTGTCCCACAGGATCTTaGAGCCTACGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLCPTGS*SLRLVY
Trigger: ATATACAAGACGTAGGCTTCAAGATCCTGTGGGACA...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACTGTCCCACAGGATCTTaGAGCCTACGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: KEHGREGGSLVCFTISLHCPTGS*SLRLVY
Trigger: ATATACAAGACGTAGGCTTCAAGATCCTGTGGGACA...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTATAAGGCCTGTGGCTTaGTTGCTACTGGTTCGACAT +
Preference number: 2 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFIRPVA*LLLVRH
Trigger: ATGTCGAACCAGTAGCAATCAAGCCACAGGCCTTAT...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAACAGTTGAGAAGACATaGAATAAGGCCTGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: NMAGREGLLFVLQSLYTATVEKT*NKACGL
Trigger: CAAGCCACAGGCCTTATTTCATGTCTTCTCAACTGT...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTACAGTTGAGAAGACATaGAATAAGGCCTGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLTVEKT*NKACGL
Trigger: CAAGCCACAGGCCTTATTTCATGTCTTCTCAACTGT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTATTTCCCCACATTTGTaGAAGGCATGGCAGGACTTC +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFISPHL*KAWQDF
Trigger: GAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAAT...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGGTCACCATGATGGGTaGAAGAAGAAACTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: LCSRINRGVTQDLQISPHGHHDG*KKKLCL
Trigger: TAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCT +
Preference number: 2 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLRKGTK*PQQTPS
Trigger: AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCT...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAATGTCCCACAGGATCTTaGAGCCTACGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQCPTGS*SLRLVY
Trigger: ATATACAAGACGTAGGCTTCAAGATCCTGTGGGACA...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTCCCACAGGATCTTaGAGCCTACGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFCPTGS*SLRLVY
Trigger: ATATACAAGACGTAGGCTTCAAGATCCTGTGGGACA...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGGGCAGAGGTCACCATaGTGGGTGGAAGAAGAAACT +
Preference number: 2 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYGQRSP*WVEEET
Trigger: AGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCC...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAATCACTAGAAAGTCTGTaGGAAGTGCCCGGTGACCCC +
Preference number: 2 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLESLESL*EVPGDP
Trigger: GGGGTCACCGGGCACTTCTCACAGACTTTCTAGTGA...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 2 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 2 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp ATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTAAAGACTTGTCACGGAAGTGCAAACGGGTaGAGAATCTCTCTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: ILACGPRNSLAVLLKTCHGSANG*RISLLL
Trigger: AAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCC...GTGACAAGTCTTTAATAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCATGGCTTGATTGCTACTaGTTCGACATGGTTTCAGTT +
Preference number: 2 (lower is better)
Translates to: NMAGREGLLFVLQSLYTAWLDCY*FDMVSV
Trigger: AACTGAAACCATGTCGAACCAGTAGCAATCAAGCCA...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCT +
Preference number: 2 (lower is better)
Translates to: LPILCNQELDTIFSPNSFRKGTK*PQQTPS
Trigger: AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCT...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp CAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTAAAGACTACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 2 (lower is better)
Translates to: QLILACGPRNSLAVLLKTTESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...AGTCTTTAATAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAA +
Preference number: 2 (lower is better)
Translates to: LCSRINRGVTQDLQISPHGQLQG*AYFYSK
Trigger: TTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CAA 90 bp GGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTaGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTT +
Preference number: 2 (lower is better)
Translates to: GSANGCRISLLLFQV*SGKVRYSQFVPQDL
Trigger: AAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACGGGCAGAGGTCACCATaGTGGGTGGAAGAAGAAACT +
Preference number: 2 (lower is better)
Translates to: ETLPILCNQELDTIFSPNGQRSP*WVEEET
Trigger: AGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCC...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 2 (lower is better)
Translates to: LPILCNQELDTIFSPNSFRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 2 (lower is better)
Translates to: EEETLPILCNQELDTIFSRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 2 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp AGGGGGAGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATTGCTTAACATAAGAGCAGAGCTTTGCTaGAACAATTTACATGTCATT +
Preference number: 2 (lower is better)
Translates to: RGRWDWKGPPWSSLLLNIRAELC*NNLHVI
Trigger: AATGACATGTAAATTGTTTCAGCAAAGCTCTGCTCT...TATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR-3UTR TCA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAATTTACACAAAGAGCTTaGAAGAAGAGCAGAGCTTTG +
Preference number: 2 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQFTQRA*KKSRAL
Trigger: CAAAGCTCTGCTCTTCTTTCAAGCTCTTTGTGTAAA...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000198139.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACTGGAAGAAGAAACTTTaGCTATTTTGTGCAACCAAG +
Preference number: 2 (lower is better)
Translates to: KEHGREGGSLVCFTISLHWKKKL*LFCATK
Trigger: CTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCA...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 2 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTCATGGTTTCAGTTGTTaGCGTAATGTAAAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFHGFSC*RNVKGL
Trigger: CAAACCTTTTACATTACGGCAACAACTGAAACCATG...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATACCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: ETLPILCNQELDTIFSPNPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAATGTCCCACAGGATCTTaGAGCCTACGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKCPTGS*SLRLVY
Trigger: ATATACAAGACGTAGGCTTCAAGATCCTGTGGGACA...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 2 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLEALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATCATGGTTTCAGTTGTTaGCGTAATGTAAAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYHGFSC*RNVKGL
Trigger: CAAACCTTTTACATTACGGCAACAACTGAAACCATG...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATGGCTTGATTGCTACTaGTTCGACATGGTTTCAGTT +
Preference number: 2 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIWLDCY*FDMVSV
Trigger: AACTGAAACCATGTCGAACCAGTAGCAATCAAGCCA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTCATGGTTTCAGTTGTTaGCGTAATGTAAAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSHGFSC*RNVKGL
Trigger: CAAACCTTTTACATTACGGCAACAACTGAAACCATG...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATGGAAGAAGAAACTTTaGCTATTTTGTGCAACCAAG +
Preference number: 2 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIWKKKL*LFCATK
Trigger: CTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTTGGAAGAAGAAACTTTaGCTATTTTGTGCAACCAAG +
Preference number: 2 (lower is better)
Translates to: LPILCNQELDTIFSPNSFWKKKL*LFCATK
Trigger: CTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCA...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: HSSWRETGPLPCLGCSPGSLLAE*EGAAGP
Trigger: GGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACT...ACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 72 bp ACCATGGGCCAACAGAGCCGAGTCTTCTGGCCGAGTTaGAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCT +
Preference number: 3 (lower is better)
Translates to: TMGQQSRVFWPS*RELQGPTGSVS
Trigger: AGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACTCGGCTCTGTTGGCCCATGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 72 bp GTCCGCTGGGGGATGAGCGGCGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGGTTGTCACCATGCATC +
Preference number: 3 (lower is better)
Translates to: VRWGMSGASSSL*RNSSPGLSPCI
Trigger: GATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCATCCCCCAGCGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR TCA 72 bp GGGGTTGGTACAGAAGCGAGTGAGTCCGCTGGGGGATaGGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCA +
Preference number: 3 (lower is better)
Translates to: GVGTEASESAGG*AAPPALCGGTP
Trigger: TGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 72 bp CTGGGCTGCTCTCCGGGTAGGGAGAGTCTCTTAGGTTaGGCATGCTCGTGTACAGAGAGTCTCTGTTGGGGG +
Preference number: 3 (lower is better)
Translates to: LGCSPGRESLLG*ACSCTESLCWG
Trigger: CCCCCAACAGAGACTCTCTGTACACGAGCATGCCCAACCTAAGAGACTCTCCCTACCCGGAGAGCAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQSLLAE*EGAAGP
Trigger: GGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACT...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATACTTGTGTCCCGGGCATaGTTCAGTGAATGTCCTCTA +
Preference number: 3 (lower is better)
Translates to: STVHDLHAVVVVRLAQGILVSRA*FSECPL
Trigger: TAGAGGACATTCACTGAACAATGCCCGGGACACAAG...TATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197348.5
3UTR GCA 72 bp AACAGAGCCGAGTCTTCTGGCCGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCGTCTCTATCAATTAAT +
Preference number: 3 (lower is better)
Translates to: NRAESSGRVGGS*RAPLAASLSIN
Trigger: ATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACTCGGCTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCACTTGTGTCCCGGGCATaGTTCAGTGAATGTCATTAT +
Preference number: 3 (lower is better)
Translates to: DLVHSPRPARRRGSPPCALVSRA*FSECHY
Trigger: ATAATGACATTCACTGAACAATGCCCGGGACACAAG...TGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200456.2
3UTR GCA 72 bp TCTTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCAGCCACAATCGCGTCA +
Preference number: 3 (lower is better)
Translates to: SLWRNSSPGLSP*IKDEASATIAS
Trigger: TGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 72 bp ATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGGAGGTTGTTGTGCACT +
Preference number: 3 (lower is better)
Translates to: ITGLTGSLSSKL*VLLPPRRLLCT
Trigger: AGTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR TCA 72 bp GAACTCCAGCCCTGGGTTGTCACCATGCATCAAAGATaGGGCGTCAGCCACAATCGCGTCATCTTCACTGCT +
Preference number: 3 (lower is better)
Translates to: ELQPWVVTMHQR*GVSHNRVIFTA
Trigger: AGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSSLLAE*EGAAGP
Trigger: GGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACT...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCAGATTTCCCCACATTaGTGCAAGGCATGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: TAARNMAGREGLLFVLQSQISPH*CKAWQD
Trigger: GTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTG...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 3 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYSLLAE*EGAAGP
Trigger: GGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACT...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 72 bp GACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAGAGCCGAGTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: DCEVQSDPFYYK*RTMGQQSRVFW
Trigger: CCAGAAGACTCGGCTCTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 72 bp AGTCTGAGGGTTCCTAAGCAGAGGGGGAGATGGGATTaGAAAGGACCACCTTGGTCGAGTCTATTGCTTAAC +
Preference number: 3 (lower is better)
Translates to: SLRVPKQRGRWD*KGPPWSSLLLN
Trigger: GTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCTCTGCTTAGGAACCCTCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR CCA 72 bp TACTTTTATAGTAAATGTCCTCGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: YFYSKCPRSHSS*RETGPLPCLGC
Trigger: GCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACGAGGACATTTACTATAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 3 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR TCA 72 bp CTTTTGTTCACTAGAAAGTCTGTGAGAAGTGCCCGGTaGCCCCTTCGCCCTCTGTTCCAGAATAAACAGAGG +
Preference number: 3 (lower is better)
Translates to: LLFTRKSVRSAR*PLRPLFQNKQR
Trigger: CCTCTGTTTATTCTGGAACAGAGGGCGAAGGGGTCACCGGGCACTTCTCACAGACTTTCTAGTGAACAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 72 bp GGTAGCACATGTGGAGATGGCGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAATGTCCTCGTTCTCAC +
Preference number: 3 (lower is better)
Translates to: GSTCGDGGQLQG*AYFYSKCPRSH
Trigger: GTGAGAACGAGGACATTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCCGCCATCTCCACATGTGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp AAATCTATTCTTCTCACTGCAAAGGATAAGCAGGCCAACTTATACTTATGCTTGAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: KSILLTAKDKQANLYLCLSLLAE*EGAAGP
Trigger: GGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACT...CAAGCATAAGTATAAGTTGGCCTGCTTATCCTTTGCAGTGAGAAGAATAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR-3UTR CAA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTTTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 3 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 72 bp TTTACAGACTCAGTTCACCAACTGCCGCAAGGAACATaGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAT +
Preference number: 3 (lower is better)
Translates to: FTDSVHQLPQGT*PGGRVSCLFYN
Trigger: ATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGGTGAACTGAGTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGGGAGGGAGGGTCTCTaGTTTGTTTTACAATCTCTC +
Preference number: 3 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKGREGL*FVLQSL
Trigger: GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCCTTGAAGCCTACGTCTaGTATATAATACAATGCAGG +
Preference number: 3 (lower is better)
Translates to: AARNMAGREGLLFVLQSLLEAYV*YIIQCR
Trigger: CCTGCATTGTATTATATACAAGACGTAGGCTTCAAG...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 3 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTCGTAATGTAAAAGGTTaGCAGGGAAGTGCAAACGGG +
Preference number: 3 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFRNVKG*QGSANG
Trigger: CCCGTTTGCACTTCCCTGCAAACCTTTTACATTACG...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR TCA 72 bp CAGTGGGAAATCAACAACGATGGGCAGAGGTCACCATaGTGGGTGGAAGAAGAAACTTTGCCTATTTTGTGC +
Preference number: 3 (lower is better)
Translates to: QWEINNDGQRSP*WVEEETLPILC
Trigger: GCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGTTGATTTCCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACA +
Preference number: 3 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLGRVSC*FYNLST
Trigger: TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACA +
Preference number: 3 (lower is better)
Translates to: LCSRINRGVTQDLQISPHGRVSC*FYNLST
Trigger: TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAATTGTCCCACAGGATCTaGAAGCCTACGTCTTGTATA +
Preference number: 3 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKLSHRI*KPTSCI
Trigger: TATACAAGACGTAGGCTTCAAGATCCTGTGGGACAA...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCATTGTCCCACAGGATCTaGAAGCCTACGTCTTGTATA +
Preference number: 3 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPLSHRI*KPTSCI
Trigger: TATACAAGACGTAGGCTTCAAGATCCTGTGGGACAA...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTCCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 3 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLEKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTCGTACTATTAAAGACTaGTCACCAGCTGCATCTGTC +
Preference number: 3 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFRTIKD*SPAASV
Trigger: GACAGATGCAGCTGGTGACAAGTCTTTAATAGTACG...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR TCA 72 bp ATGCTTGCATTCTTATACGTAACTATGGTTACAGTCTaGGGGTTCCTAAGCAGAGGGGGAGATGGGATTGGA +
Preference number: 3 (lower is better)
Translates to: MLAFLYVTMVTV*GFLSRGGDGIG
Trigger: TCCAATCCCATCTCCCCCTCTGCTTAGGAACCCTCAGACTGTAACCATAGTTACGTATAAGAATGCAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR GCA 72 bp GGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTaGCTATTTTGTGCAACCAAGAGCTCGACACAATAT +
Preference number: 3 (lower is better)
Translates to: GRGHHDGWKKKL*LFCATKSSTQY
Trigger: ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATCGTAATGTAAAAGGTTaGCAGGGAAGTGCAAACGGG +
Preference number: 3 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYRNVKG*QGSANG
Trigger: CCCGTTTGCACTTCCCTGCAAACCTTTTACATTACG...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGTGGAAGAAGAAACTTaGCCTATTTTGTGCAACCAA +
Preference number: 3 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKVEEET*PILCNQ
Trigger: TTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCAC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCCAGATTTCCCCACATTaGTGCAAGGCATGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLQISPH*CKAWQD
Trigger: GTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTG...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATACAGATTTCCCCACATTaGTGCAAGGCATGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIQISPH*CKAWQD
Trigger: GTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTG...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCACAGATTTCCCCACATTaGTGCAAGGCATGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: EETLPILCNQELDTIFSPQISPH*CKAWQD
Trigger: GTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTG...TGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGAAGAATAGGCACCTTTaGTTCACTAGAAAGTCTGTG +
Preference number: 3 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKKNRHL*FTRKSV
Trigger: CACAGACTTTCTAGTGAACAAAAGGTGCCTATTCTT...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAATTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 3 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: LPILCNQELDTIFSPNSFKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 72 bp AAATCAACAACGATGGGCAGAGGTCACCATGATGGGTaGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAG +
Preference number: 3 (lower is better)
Translates to: KSTTMGRGHHDG*KKKLCLFCATK
Trigger: CTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGTTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 72 bp GCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCTACAGTGGGAAATCAA +
Preference number: 3 (lower is better)
Translates to: AIRNLNVRKGTK*PQQTPSTVGNQ
Trigger: TTGATTTCCCACTGTAGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TGTAAAAGGTTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCTTGAAGCCTACGTCTaGTATATAATACAATGCAGG +
Preference number: 3 (lower is better)
Translates to: CKRFAGKCKRVQNLSPAFLEAYV*YIIQCR
Trigger: CCTGCATTGTATTATATACAAGACGTAGGCTTCAAG...AAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAACCTTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGAATAAGGCCTGTGGCTaGATTGCTACTGGTTCGACA +
Preference number: 3 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQNKACG*IATGST
Trigger: TGTCGAACCAGTAGCAATCAAGCCACAGGCCTTATT...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATAAGAAGAGCAGAGCTTaGCTGAAACAATTTACATGT +
Preference number: 3 (lower is better)
Translates to: LCSRINRGVTQDLQISPHKKSRA*LKQFTC
Trigger: ACATGTAAATTGTTTCAGCAAAGCTCTGCTCTTCTT...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000198139.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 3 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTGGGAGGGAGGGTCTCTaGTTTGTTTTACAATCTCTC +
Preference number: 3 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSGREGL*FVLQSL
Trigger: GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCC...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACTTGTCCCACAGGATCTaGAAGCCTACGTCTTGTATA +
Preference number: 3 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYLSHRI*KPTSCI
Trigger: TATACAAGACGTAGGCTTCAAGATCCTGTGGGACAA...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGTTGTCCCACAGGATCTaGAAGCCTACGTCTTGTATA +
Preference number: 3 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQLSHRI*KPTSCI
Trigger: TATACAAGACGTAGGCTTCAAGATCCTGTGGGACAA...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCCGTAATGTAAAAGGTTaGCAGGGAAGTGCAAACGGG +
Preference number: 3 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLRNVKG*QGSANG
Trigger: CCCGTTTGCACTTCCCTGCAAACCTTTTACATTACG...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTGTGGAAGAAGAAACTTaGCCTATTTTGTGCAACCAA +
Preference number: 3 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSVEEET*PILCNQ
Trigger: TTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCAC...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTGTCCCACAGGATCTaGAAGCCTACGTCTTGTATA +
Preference number: 3 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLLSHRI*KPTSCI
Trigger: TATACAAGACGTAGGCTTCAAGATCCTGTGGGACAA...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTCGTAATGTAAAAGGTTaGCAGGGAAGTGCAAACGGG +
Preference number: 3 (lower is better)
Translates to: LPILCNQELDTIFSPNSFRNVKG*QGSANG
Trigger: CCCGTTTGCACTTCCCTGCAAACCTTTTACATTACG...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTAATAAGGCCTGTGGCTaGATTGCTACTGGTTCGACA +
Preference number: 3 (lower is better)
Translates to: LPILCNQELDTIFSPNSFNKACG*IATGST
Trigger: TGTCGAACCAGTAGCAATCAAGCCACAGGCCTTATT...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTAAGAAGAGCAGAGCTTaGCTGAAACAATTTACATGT +
Preference number: 3 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSKKSRA*LKQFTC
Trigger: ACATGTAAATTGTTTCAGCAAAGCTCTGCTCTTCTT...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000198139.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCCGTACTATTAAAGACTaGTCACCAGCTGCATCTGTC +
Preference number: 3 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLRTIKD*SPAASV
Trigger: GACAGATGCAGCTGGTGACAAGTCTTTAATAGTACG...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACA +
Preference number: 3 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIGRVSC*FYNLST
Trigger: TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGCTTGAAGCCTACGTCTaGTATATAATACAATGCAGG +
Preference number: 3 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQLEAYV*YIIQCR
Trigger: CCTGCATTGTATTATATACAAGACGTAGGCTTCAAG...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR GCA 72 bp CTGCAAAGGATAAGCAGGCCAACTTATACTTATGCTTaGATTCTTATACGTAACTATGGTTACAGTCTGAGG +
Preference number: 3 (lower is better)
Translates to: LQRISRPTYTYA*ILIRNYGYSLR
Trigger: CCTCAGACTGTAACCATAGTTACGTATAAGAATGCAAGCATAAGTATAAGTTGGCCTGCTTATCCTTTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR-3UTR CAA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACA +
Preference number: 3 (lower is better)
Translates to: LPILCNQELDTIFSPNSFGRVSC*FYNLST
Trigger: TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACA +
Preference number: 3 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKGRVSC*FYNLST
Trigger: TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAGTGGAAGAAGAAACTTaGCCTATTTTGTGCAACCAA +
Preference number: 3 (lower is better)
Translates to: EETLPILCNQELDTIFSPVEEET*PILCNQ
Trigger: TTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCAC...TGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR TCA 72 bp AAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTaGAGCCTACGTCTTGTATATAATACAATGCAGGCC +
Preference number: 3 (lower is better)
Translates to: KSKIQSICPTGS*SLRLVYNTMQA
Trigger: GGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp ATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTCTTGAAGCCTACGTCTaGTATATAATACAATGCAGG +
Preference number: 3 (lower is better)
Translates to: ISLLLFQVLSGKVRYSQFLEAYV*YIIQCR
Trigger: CCTGCATTGTATTATATACAAGACGTAGGCTTCAAG...AAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGTCTCTGTTGGGGGACTGGAGGTGGTCGTCGGCCTCGGCCGTCAGCTGGGAGACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: ESLLGDWRWSSASAVSWETQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...CTCCCAGCTGACGGCCGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
3UTR CAA 72 bp AACCATGGGCCAACAGAGCCGAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: NHGPTEPSLLAE*EGAAGPHWQRL
Trigger: GAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACTCGGCTCTGTTGGCCCATGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCGCTGGGGGATGAGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLGDERRLQLFVAELQPWHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...CCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCATCCCCCAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CCGCTGGGGGATGAGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: PLGDERRLQLFVAELQPWTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...CCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCATCCCCCAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp GTACAGAGAGTCTCTGTTGGGGGACTGGAGGTGGTCGTCGGCCTCGGCCGTCAGCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VQRVSVGGLEVVVGLGRQHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...CTGACGGCCGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR CCA 90 bp CACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HSSWRETGPLPCLGCSPGHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...ACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR CCA 90 bp GACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: DLVHSPRPARRRGSPPCAEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...TGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR TCA 90 bp CACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: HDLHAVVVVRLAQGIAVVTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...AACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp GAGTCTCTGTTGGGGGACTGGAGGTGGTCGTCGGCCTCGGCCGTCAGCTGGGAGAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: ESLLGDWRWSSASAVSWENIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...CTCCCAGCTGACGGCCGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp CACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: HDLHAVVVVRLAQGIAVVSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...AACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR CCA 90 bp ACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTAGGGAGAGTCTCTTAGGTGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: TGPLPCLGCSPGRESLLGVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...ACCTAAGAGACTCTCCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: QTRCRSDLVHSPRPARRREHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...ACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR GCA 90 bp GACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAATTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: DLHAVVVVRLAQGIAVVEFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...TTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp TCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCCCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: SDLVHSPRPARRRGSPPCPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...GCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp TTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: LVHSPRPARRRGSPPCAGGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...CCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QTRCRSDLVHSPRPARRRHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...ACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR CCA 90 bp ATCGCGTCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: IASSSLLLPPITGLTGSLEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...CAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR CCA 90 bp TCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: SNAVSFRLSPQSTTCTPSGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...CGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200456.2
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FSNAVSFRLSPQSTTCTPSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...CGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR GCA 90 bp TCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCAGTGAATGTCCTGTGTaGCAGAGGAGTACCGAGCAC +
Preference number: 4 (lower is better)
Translates to: SDLVHSPRPARRRGSPPCSECPV*QRSTEH
Trigger: GTGCTCGGTACTCCTCTGGCACACAGGACATTCACT...GCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
3UTR CAA 72 bp GCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGATGAGGCGTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: ASSSLWRNSSPG*SPCIKDEASAT
Trigger: TGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: DLVHSPRPARRRGSPPCASSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...TGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200456.2
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGCCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTTTTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: FTAAAANHRFNRELELQVFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...AACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp CGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: RSDLVHSPRPARRRGSPPLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...AGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTACAGAGAGTCTCTGTTGGGGGACTGGAGGTGGTCGTCGGCCTCGGCCGTCAGTCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: VQRVSVGGLEVVVGLGRQSLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...CTGACGGCCGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATCGCGTCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: IASSSLLLPPITGLTGSLGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...CAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp ATCGCGTCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: IASSSLLLPPITGLTGSLSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...CAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGCTTGAGCTCCAAGTTGTGGGTTTTGTTGCCGCCCCGGAGGTTGTTGTGCACGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: ELELQVVGFVAAPEVVVHEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...GTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp ACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTAGGGAGAGTCTCTTAGGTCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: TGPLPCLGCSPGRESLLGQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...ACCTAAGAGACTCTCCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp CCTTCCCGGACGTCCCCCTCAGGGATGCACCCTTCTTTGTTAATGGGGATGATGCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: PSRTSPSGMHPSLLMGMMRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...CATCATCCCCATTAACAAAGAAGGGTGCATCCCTGAGGGGGACGTCCGGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTAGGGAGAGTCTCTTAGGTAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: TGPLPCLGCSPGRESLLGKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...ACCTAAGAGACTCTCCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp CGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTGAGCTGAAGGGGCATTaGATACAACTGTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: RSDLVHSPRPARRRGSPPELKGH*IQLFQR
Trigger: TCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTC...AGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200456.2
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPTESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTAAGGCTGCTCTGCTaGAACCTTCTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVRLLC*NLLYSV
Trigger: CACCGAGTACAGAAGGTTTCAGCAGAGCAGCCTTAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGTAAGGCTGCTCTGCTaGAACCTTCTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPVRLLC*NLLYSV
Trigger: CACCGAGTACAGAAGGTTTCAGCAGAGCAGCCTTAC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPREPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTTGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: FTAAAANHRFNRELELQVEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...AACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp TCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SDLVHSPRPARRRGSPPCIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...GCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAATTGGTTAGGTGGCTaGAAGCGCACGTTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWNWLGG*KRTLCE
Trigger: CTCGCACAACGTGCGCTTGCAGCCACCTAACCAATT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VIFTAAAANHRFNRELELHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...GAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp TCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCTATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SDLVHSPRPARRRGSPPCYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...GCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp GGTAGGGAGAGTCTCTTAGGTTGGGCATGCTCGTGTACAGAGAGTCTCTGTTGGTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: GRESLLGWACSCTESLCWWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...CCAACAGAGACTCTCTGTACACGAGCATGCCCAACCTAAGAGACTCTCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: STVHDLHAVVVVRLAQGIKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...TATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
3UTR CAA 72 bp GGTTTAACCGGGAGCTTGAGCTCCAAGTTGTGGGTTTaGTTGCCGCCCCGGAGGTTGTTGTGCACTAACTCT +
Preference number: 4 (lower is better)
Translates to: GLTGSLSSKLWV*LPPRRLLCTNS
Trigger: AGAGTTAGTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTCCCGGTTAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: TAARNMAGREGLLFVLQSTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: DLHAVVVVRLAQGIAVVEIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...TTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp CACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTGGGAATACCGTAAAATaGAGTTATTGTTCCATACGT +
Preference number: 4 (lower is better)
Translates to: HSSWRETGPLPCLGCSPGGNTVK*SYCSIR
Trigger: ACGTATGGAACAATAACTTCATTTTACGGTATTCCC...ACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGATCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGTAGGGAGAGTCTCTTAGGTTGGGCATGCTCGTGTACAGAGAGTCTCTGTTGGTCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GRESLLGWACSCTESLCWSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...CCAACAGAGACTCTCTGTACACGAGCATGCCCAACCTAAGAGACTCTCCCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTTGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: HSSWRETGPLPCLGCSPGWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...ACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200456.2
CDS-3UTR TCA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACATGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: QTRCRSDLVHSPRPARRRCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...ACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TCTTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATGCATCAAAGATGAGGCGGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: SLWRNSSPGLSPCIKDEAAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...CGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: HSSWRETGPLPCLGCSPGIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...ACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATGCATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: SGASSSLWRNSSPGLSPCIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...GCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: HDLHAVVVVRLAQGIAVVKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...AACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCTTGCACCAAGCCCCTaGCTTCTGCTCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNLAPSP*LLLSFI
Trigger: TATGAAGCTGAGCAGAAGTCAGGGGCTTGGTGCAAG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLATQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTTAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: FTAAAANHRFNRELELQVSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...AACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGCCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTCCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACCCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TAARNMAGREGLLFVLQSLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGTAGGGAGAGTCTCTTAGGTTGGGCATGCTCGTGTACAGAGAGTCTCTGTTGGGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GRESLLGWACSCTESLCWAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...CCAACAGAGACTCTCTGTACACGAGCATGCCCAACCTAAGAGACTCTCCCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACATTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: AARNMAGREGLLFVLQSLPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: NMAGREGLLFVLQSLYTAGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGTAAGGCTGCTCTGCTaGAACCTTCTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSVRLLC*NLLYSV
Trigger: CACCGAGTACAGAAGGTTTCAGCAGAGCAGCCTTAC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: DLHAVVVVRLAQGIAVVEIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...TTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAATTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: DLHAVVVVRLAQGIAVVEFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...TTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200456.2
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGTAAAAGGTTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: CKRFAGKCKRVQNLSPAFVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...AAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAACCTTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACCCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAATTGGTTAGGTGGCTaGAAGCGCACGTTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSNWLGG*KRTLCE
Trigger: CTCGCACAACGTGCGCTTGCAGCCACCTAACCAATT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCGAGCTGAAGGGGCATTaGATACAACTGTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: AARNMAGREGLLFVLQSLELKGH*IQLFQR
Trigger: TCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTC...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR GCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCACGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NMAGREGLLFVLQSLYTARGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGGGGGAGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATTGCTTAACATACGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: RGRWDWKGPPWSSLLLNIRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...TATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRSLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTTTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: FTAAAANHRFNRELELQVCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...AACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLARDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGCATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAACACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGGGGAGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATTGCTTAACATAACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: RGRWDWKGPPWSSLLLNITESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...TATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
CDS-3UTR CCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
3UTR CAA 72 bp CCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACACAGCAGCAGAAACGT +
Preference number: 4 (lower is better)
Translates to: PQGTWPGGRVSC*FYNLSTQQQKR
Trigger: ACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTTGAACAGCTCAGCTaGAGAAGTTATTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPFEQLS*RSYCHS
Trigger: GCTGTGACAATAACTTCTTCAGCTGAGCTGTTCAAA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200216.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCAAGCCCCTGACTTCTaGTCAGCTTCATATATACAT +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPQAPDF*SASYIH
Trigger: ATGTATATATGAAGCTGAGCAGAAGTCAGGGGCTTG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGCAAGCCCCTGACTTCTaGTCAGCTTCATATATACAT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRQAPDF*SASYIH
Trigger: ATGTATATATGAAGCTGAGCAGAAGTCAGGGGCTTG...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCAAGCCCCTGACTTCTaGTCAGCTTCATATATACAT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWQAPDF*SASYIH
Trigger: ATGTATATATGAAGCTGAGCAGAAGTCAGGGGCTTG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACACCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPNGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TCTTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATGCATCAAAGATGAGGCGAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SLWRNSSPGLSPCIKDEANGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...CGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTAATTGGTTAGGTGGCTaGAAGCGCACGTTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLNWLGG*KRTLCE
Trigger: CTCGCACAACGTGCGCTTGCAGCCACCTAACCAATT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGAGCTGAAGGGGCATTaGATACAACTGTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNELKGH*IQLFQR
Trigger: TCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR GCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLARGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: TAARNMAGREGLLFVLQSPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLARHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGTAAAAGGTTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: CKRFAGKCKRVQNLSPAFRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...AAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAACCTTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACATCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLASLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: AARNMAGREGLLFVLQSLYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATCAAAGATGAGGCGTCAGCCACAATCGCGTCATCTTCACTGCTGCTGCCGCCAACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: IKDEASATIASSSLLLPPTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...TGGCGGCAGCAGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLALSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKTESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPTESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLATESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPGQLQG*AYFYSK
Trigger: TTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWGQLQG*AYFYSK
Trigger: TTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATCAAAGATGAGGCGTCAGCCACAATCGCGTCATCTTCACTGCTGCTGCCGCCATGTGATGTCAGTCCTTaGTTAAGGGTAGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: IKDEASATIASSSLLLPPCDVSP*LRVEVL
Trigger: TAGCACTTCTACCCTTAACCAAGGACTGACATCACA...TGGCGGCAGCAGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200216.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAAGGCTGCTCTGCTaGAACCTTCTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAVRLLC*NLLYSV
Trigger: CACCGAGTACAGAAGGTTTCAGCAGAGCAGCCTTAC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCGATTGTTGCACCTTTaGGTCATGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACRLLHL*VMILKA
Trigger: TGCCTTCAAAATCATGACTCAAAGGTGCAACAATCG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACTTGCACCAAGCCCCTaGCTTCTGCTCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQLAPSP*LLLSFI
Trigger: TATGAAGCTGAGCAGAAGTCAGGGGCTTGGTGCAAG...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGGGGGAGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATTGCTTAACATAATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: RGRWDWKGPPWSSLLLNIILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...TATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000106128.7
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTTGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: AARNMAGREGLLFVLQSLGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLALLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLARCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQNGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACNGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGCCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTACCGTCTACTCGGTTTaGAAGTTTGTATGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPTVYSV*KFVCCC
Trigger: ACAACAACATACAAACTTCCAAACCGAGTAGACGGT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCATGCATCAAAGATGAGGCGTCAGCCACAATCGCGTCATCTTCACTGCTGCTGGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PCIKDEASATIASSSLLLELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...CAGCAGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAAGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACATTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: EETLPILCNQELDTIFSPASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...TGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAATCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLESLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCATCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: EETLPILCNQELDTIFSPSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...TGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVTESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLTESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTTCAGTGAATGTCCTTaGTTAAGGGTAGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWFSECP*LRVEVL
Trigger: TAGCACTTCTACCCTTAACCAAGGACATTCACTGAA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000195988.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTCAGTGAATGTCCTTaGTTAAGGGTAGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPFSECP*LRVEVL
Trigger: TAGCACTTCTACCCTTAACCAAGGACATTCACTGAA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000195988.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACTTGCACCAAGCCCCTaGCTTCTGCTCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLLAPSP*LLLSFI
Trigger: TATGAAGCTGAGCAGAAGTCAGGGGCTTGGTGCAAG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGGGAATACCGTAAAATaGAGTTATTGTTCCATACGT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWGNTVK*SYCSIR
Trigger: ACGTATGGAACAATAACTTCATTTTACGGTATTCCC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGGAATACCGTAAAATaGAGTTATTGTTCCATACGT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPGNTVK*SYCSIR
Trigger: ACGTATGGAACAATAACTTCATTTTACGGTATTCCC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGTGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAGGAGCAGTTTGCATTaGAATAATTGTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWRSSLH*NNCQDQ
Trigger: TTGATCCTGACAATTATTTCAATGCAAACTGCTCCT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAGGAGCAGTTTGCATTaGAATAATTGTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRRSSLH*NNCQDQ
Trigger: TTGATCCTGACAATTATTTCAATGCAAACTGCTCCT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: EETLPILCNQELDTIFSPTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...TGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGAACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGTTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTTTCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCTTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: FSQTRCRSDLVHSPRPARFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...GCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200456.2
CDS-3UTR TCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTTTCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: FSQTRCRSDLVHSPRPARAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...GCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200216.5
CDS-3UTR TCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: TAARNMAGREGLLFVLQSGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACACTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGTAAAAGGTTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: CKRFAGKCKRVQNLSPAFAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...AAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAACCTTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTGGATTATAATCCACTaGAGCAATATACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRWIIIH*SNILVL
Trigger: CAGTACCAGTATATTGCTGCAGTGGATTATAATCCA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGATTATAATCCACTaGAGCAATATACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPWIIIH*SNILVL
Trigger: CAGTACCAGTATATTGCTGCAGTGGATTATAATCCA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACTTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGCCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ACTAACTCTGAAATGATCATTTTCTCAAACGCGGTGTCGTTCAGACTTAGTCCAAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TNSEMIIFSNAVSFRLSPSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...TGGACTAAGTCTGAACGACACCGCGTTTGAGAAAATGATCATTTCAGAGTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTAAAGACTTGTCACTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: ILACGPRNSLAVLLKTCHSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...GTGACAAGTCTTTAATAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: EETLPILCNQELDTIFSPEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...TGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: NMAGREGLLFVLQSLYTAVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTTGAACAGCTCAGCTaGAGAAGTTATTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSFEQLS*RSYCHS
Trigger: GCTGTGACAATAACTTCTTCAGCTGAGCTGTTCAAA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTAAAGACTTGTCACCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ILACGPRNSLAVLLKTCHHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...GTGACAAGTCTTTAATAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLACVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCATGCATCAAAGATGAGGCGTCAGCCACAATCGCGTCATCTTCACTGCTGCTGAGGAGCAGTTTGCATTaGAATAATTGTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: PCIKDEASATIASSSLLLRSSLH*NNCQDQ
Trigger: TTGATCCTGACAATTATTTCAATGCAAACTGCTCCT...CAGCAGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: LPILCNQELDTIFSPNSFWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTGGATTATAATCCACTaGAGCAATATACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACWIIIH*SNILVL
Trigger: CAGTACCAGTATATTGCTGCAGTGGATTATAATCCA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLEVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGAGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: ETLPILCNQELDTIFSPNFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLANIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAAATTGGTTAGGTGGCTaGAAGCGCACGTTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLNWLGG*KRTLCE
Trigger: CTCGCACAACGTGCGCTTGCAGCCACCTAACCAATT...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGACCGTCTACTCGGTTTaGAAGTTTGTATGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQTVYSV*KFVCCC
Trigger: ACAACAACATACAAACTTCCAAACCGAGTAGACGGT...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCATGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: NMAGREGLLFVLQSLYTACRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTAAAGACTTGTCACGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: ILACGPRNSLAVLLKTCHGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...GTGACAAGTCTTTAATAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATACACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCTGGTTGGCATTTCTCGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FTISLHSSRNVKYLVGISRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...AGAAATGCCAACCAGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCCGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTTTCAGTGAATGTCCTTaGTTAAGGGTAGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: TAARNMAGREGLLFVLQSFSECP*LRVEVL
Trigger: TAGCACTTCTACCCTTAACCAAGGACATTCACTGAA...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCGATTGTTGCACCTTTaGGTCATGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVRLLHL*VMILKA
Trigger: TGCCTTCAAAATCATGACTCAAAGGTGCAACAATCG...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTTGAACAGCTCAGCTaGAGAAGTTATTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHFEQLS*RSYCHS
Trigger: GCTGTGACAATAACTTCTTCAGCTGAGCTGTTCAAA...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTNGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATACCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGACCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACAATTGGTTAGGTGGCTaGAAGCGCACGTTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYNWLGG*KRTLCE
Trigger: CTCGCACAACGTGCGCTTGCAGCCACCTAACCAATT...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAAAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LPILCNQELDTIFSPNSFSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGAGCTGAAGGGGCATTaGATACAACTGTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLELKGH*IQLFQR
Trigger: TCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CCA 90 bp TGTAAAAGGTTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: CKRFAGKCKRVQNLSPAFCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...AAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAACCTTTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EEETLPILCNQELDTIFSRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCTGGTTGGCATTTCTTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: FTISLHSSRNVKYLVGISWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...AGAAATGCCAACCAGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ISLLLFQVLSGKVRYSQFHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...AAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: EEETLPILCNQELDTIFSHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYILSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: ETLPILCNQELDTIFSPNLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAA +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKGQLQG*AYFYSK
Trigger: TTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTTGTGATGTCAGTCCTTaGTTAAGGGTAGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLCDVSP*LRVEVL
Trigger: TAGCACTTCTACCCTTAACCAAGGACTGACATCACA...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200216.5
CDS-3UTR TCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAGTAAGGCTGCTCTGCTaGAACCTTCTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIVRLLC*NLLYSV
Trigger: CACCGAGTACAGAAGGTTTCAGCAGAGCAGCCTTAC...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCGATTGTTGCACCTTTaGGTCATGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLARLLHL*VMILKA
Trigger: TGCCTTCAAAATCATGACTCAAAGGTGCAACAATCG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACCTTGCACCAAGCCCCTaGCTTCTGCTCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: ETLPILCNQELDTIFSPNLAPSP*LLLSFI
Trigger: TATGAAGCTGAGCAGAAGTCAGGGGCTTGGTGCAAG...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGACTTGCACCAAGCCCCTaGCTTCTGCTCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGLAPSP*LLLSFI
Trigger: TATGAAGCTGAGCAGAAGTCAGGGGCTTGGTGCAAG...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTTTGAACAGCTCAGCTaGAGAAGTTATTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFFEQLS*RSYCHS
Trigger: GCTGTGACAATAACTTCTTCAGCTGAGCTGTTCAAA...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAGGAGCAGTTTGCATTaGAATAATTGTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSRSSLH*NNCQDQ
Trigger: TTGATCCTGACAATTATTTCAATGCAAACTGCTCCT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCATTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: NMAGREGLLFVLQSLYTAFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: ETLPILCNQELDTIFSPNRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTGGATTATAATCCACTaGAGCAATATACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSWIIIH*SNILVL
Trigger: CAGTACCAGTATATTGCTGCAGTGGATTATAATCCA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCAATTGGTTAGGTGGCTaGAAGCGCACGTTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLNWLGG*KRTLCE
Trigger: CTCGCACAACGTGCGCTTGCAGCCACCTAACCAATT...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCTGGTTGGCATTTCTAATTGGTTAGGTGGCTaGAAGCGCACGTTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: FTISLHSSRNVKYLVGISNWLGG*KRTLCE
Trigger: CTCGCACAACGTGCGCTTGCAGCCACCTAACCAATT...AGAAATGCCAACCAGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LPILCNQELDTIFSPNSFRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGGGGAGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATTGCTTAACATAACCGTCTACTCGGTTTaGAAGTTTGTATGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RGRWDWKGPPWSSLLLNITVYSV*KFVCCC
Trigger: ACAACAACATACAAACTTCCAAACCGAGTAGACGGT...TATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106128.7
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVSLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLATAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: EEETLPILCNQELDTIFSSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGCATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCACATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLATNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: EETLPILCNQELDTIFSPTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...TGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAAAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACGATTGTTGCACCTTTaGGTCATGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRLLHL*VMILKA
Trigger: TGCCTTCAAAATCATGACTCAAAGGTGCAACAATCG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACGATTGTTGCACCTTTaGGTCATGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVRLLHL*VMILKA
Trigger: TGCCTTCAAAATCATGACTCAAAGGTGCAACAATCG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AAATCTATTCTTCTCACTGCAAAGGATAAGCAGGCCAACTTATACTTATGCTTGGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: KSILLTAKDKQANLYLCLEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...CAAGCATAAGTATAAGTTGGCCTGCTTATCCTTTGCAGTGAGAAGAATAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106128.7
CDS-3UTR TCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGGGAATACCGTAAAATaGAGTTATTGTTCCATACGT +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLGNTVK*SYCSIR
Trigger: ACGTATGGAACAATAACTTCATTTTACGGTATTCCC...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATTTGAACAGCTCAGCTaGAGAAGTTATTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVFEQLS*RSYCHS
Trigger: GCTGTGACAATAACTTCTTCAGCTGAGCTGTTCAAA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGGGGGAGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATTGCTTAACATATGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: RGRWDWKGPPWSSLLLNIWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...TATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
CDS-3UTR TCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTTGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTTTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: LPILCNQELDTIFSPNSFRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLNGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVNGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAGAGCTGAAGGGGCATTaGATACAACTGTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSELKGH*IQLFQR
Trigger: TCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTC...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR GCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAACCGTCTACTCGGTTTaGAAGTTTGTATGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPTVYSV*KFVCCC
Trigger: ACAACAACATACAAACTTCCAAACCGAGTAGACGGT...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAATATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACAACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAACATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLEHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLEGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: ISLLLFQVLSGKVRYSQFTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...AAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTGCCAGTCATCCCTTaGTTAAGGGTAGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLLPVIP*LRVEVL
Trigger: TAGCACTTCTACCCTTAACCAAGGGATGACTGGCAA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199238.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVGQLQG*AYFYSK
Trigger: TTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLGQLQG*AYFYSK
Trigger: TTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
3UTR CAA 72 bp AACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTaGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: NGCRISLLLFQV*SGKVRYSQFVP
Trigger: TGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACGATTGTTGCACCTTTaGGTCATGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLRLLHL*VMILKA
Trigger: TGCCTTCAAAATCATGACTCAAAGGTGCAACAATCG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAGGGAATACCGTAAAATaGAGTTATTGTTCCATACGT +
Preference number: 4 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPGNTVK*SYCSIR
Trigger: ACGTATGGAACAATAACTTCATTTTACGGTATTCCC...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGATGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTAGGAGCAGTTTGCATTaGAATAATTGTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFRSSLH*NNCQDQ
Trigger: TTGATCCTGACAATTATTTCAATGCAAACTGCTCCT...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACATTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACAAGCCCCTGACTTCTaGTCAGCTTCATATATACAT +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLQAPDF*SASYIH
Trigger: ATGTATATATGAAGCTGAGCAGAAGTCAGGGGCTTG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: EEETLPILCNQELDTIFSAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAATGGATTATAATCCACTaGAGCAATATACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKWIIIH*SNILVL
Trigger: CAGTACCAGTATATTGCTGCAGTGGATTATAATCCA...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGAGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCGAGCTGAAGGGGCATTaGATACAACTGTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLELKGH*IQLFQR
Trigger: TCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTC...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR GCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGACCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAACCGTCTACTCGGTTTaGAAGTTTGTATGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVTVYSV*KFVCCC
Trigger: ACAACAACATACAAACTTCCAAACCGAGTAGACGGT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCATATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAAACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: ISLLLFQVLSGKVRYSQFAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...AAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: LPILCNQELDTIFSPNSFNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACCCAAGACTTGATAAATaGCTTATTATCTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHPRLDK*LIIFIA
Trigger: GGCTATGAAGATAATAAGCCATTTATCAAGTCTTGG...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
CDS-3UTR CCA 90 bp ATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTAAAGACTTGTCACAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: ILACGPRNSLAVLLKTCHKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...GTGACAAGTCTTTAATAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
3UTR CAA 72 bp AGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATaGCTTAACATACATAAAAGTGCACGTTACTACTTG +
Preference number: 4 (lower is better)
Translates to: RWDWKGPPWSSL*LNIHKSARYYL
Trigger: CAAGTAGTAACGTGCACTTTTATGTATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCTGGTTGGCATTTCTATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: FTISLHSSRNVKYLVGISIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...AGAAATGCCAACCAGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGGGAATACCGTAAAATaGAGTTATTGTTCCATACGT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLGNTVK*SYCSIR
Trigger: ACGTATGGAACAATAACTTCATTTTACGGTATTCCC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGGGAATACCGTAAAATaGAGTTATTGTTCCATACGT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVGNTVK*SYCSIR
Trigger: ACGTATGGAACAATAACTTCATTTTACGGTATTCCC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTTGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LPILCNQELDTIFSPNSFCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAAGGAGCAGTTTGCATTaGAATAATTGTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRSSLH*NNCQDQ
Trigger: TTGATCCTGACAATTATTTCAATGCAAACTGCTCCT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTAGGAGCAGTTTGCATTaGAATAATTGTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSRSSLH*NNCQDQ
Trigger: TTGATCCTGACAATTATTTCAATGCAAACTGCTCCT...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTTGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: ISLLLFQVLSGKVRYSQFSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...AAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 4 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGCAAGCCCCTGACTTCTaGTCAGCTTCATATATACAT +
Preference number: 4 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQQAPDF*SASYIH
Trigger: ATGTATATATGAAGCTGAGCAGAAGTCAGGGGCTTG...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATCCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYISLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGATCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGSLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAATCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLESLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLEAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATTGCCAGTCATCCCTTaGTTAAGGGTAGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYILPVIP*LRVEVL
Trigger: TAGCACTTCTACCCTTAACCAAGGGATGACTGGCAA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR CCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTTGCCAGTCATCCCTTaGTTAAGGGTAGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSLPVIP*LRVEVL
Trigger: TAGCACTTCTACCCTTAACCAAGGGATGACTGGCAA...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR TCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTCGATTGTTGCACCTTTaGGTCATGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSRLLHL*VMILKA
Trigger: TGCCTTCAAAATCATGACTCAAAGGTGCAACAATCG...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGACGATTGTTGCACCTTTaGGTCATGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGRLLHL*VMILKA
Trigger: TGCCTTCAAAATCATGACTCAAAGGTGCAACAATCG...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCTGGTTGGCATTTCTTTTGAACAGCTCAGCTaGAGAAGTTATTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: FTISLHSSRNVKYLVGISFEQLS*RSYCHS
Trigger: GCTGTGACAATAACTTCTTCAGCTGAGCTGTTCAAA...AGAAATGCCAACCAGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTGAACAGCTCAGCTaGAGAAGTTATTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLFEQLS*RSYCHS
Trigger: GCTGTGACAATAACTTCTTCAGCTGAGCTGTTCAAA...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ETLPILCNQELDTIFSPNWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAAAGGAGCAGTTTGCATTaGAATAATTGTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKRSSLH*NNCQDQ
Trigger: TTGATCCTGACAATTATTTCAATGCAAACTGCTCCT...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGTTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAATGGATTATAATCCACTaGAGCAATATACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKWIIIH*SNILVL
Trigger: CAGTACCAGTATATTGCTGCAGTGGATTATAATCCA...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATGGATTATAATCCACTaGAGCAATATACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLWIIIH*SNILVL
Trigger: CAGTACCAGTATATTGCTGCAGTGGATTATAATCCA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCACCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAATCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKSLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: LPILCNQELDTIFSPNSFCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: LPILCNQELDTIFSPNSFAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: ETLPILCNQELDTIFSPNELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGAGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: ETLPILCNQELDTIFSPNTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTCCAAGACTTGATAAATaGCTTATTATCTTCATAGCC +
Preference number: 4 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSPRLDK*LIIFIA
Trigger: GGCTATGAAGATAATAAGCCATTTATCAAGTCTTGG...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
CDS-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTTTGCCAGTCATCCCTTaGTTAAGGGTAGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: ISLLLFQVLSGKVRYSQFLPVIP*LRVEVL
Trigger: TAGCACTTCTACCCTTAACCAAGGGATGACTGGCAA...AAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAA +
Preference number: 4 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIGQLQG*AYFYSK
Trigger: TTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCC...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 4 (lower is better)
Translates to: LPILCNQELDTIFSPNSFALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
3UTR CAA 72 bp AGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTaGTATATAATACAATGCAGGCCTACAGAAAAACAA +
Preference number: 4 (lower is better)
Translates to: SQFVPQDLEAYV*YIIQCRPTEKQ
Trigger: TTGTTTTTCTGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGAGGGAATACCGTAAAATaGAGTTATTGTTCCATACGT +
Preference number: 4 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGGNTVK*SYCSIR
Trigger: ACGTATGGAACAATAACTTCATTTTACGGTATTCCC...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACAGGAGCAGTTTGCATTaGAATAATTGTCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: ETLPILCNQELDTIFSPNRSSLH*NNCQDQ
Trigger: TTGATCCTGACAATTATTTCAATGCAAACTGCTCCT...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: ETLPILCNQELDTIFSPNWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AAATCTATTCTTCTCACTGCAAAGGATAAGCAGGCCAACTTATACTTATGCTTGGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: KSILLTAKDKQANLYLCLAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...CAAGCATAAGTATAAGTTGGCCTGCTTATCCTTTGCAGTGAGAAGAATAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
CDS-3UTR TCA 90 bp ATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: ISLLLFQVLSGKVRYSQFAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...AAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCTGGTTGGCATTTCTATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: FTISLHSSRNVKYLVGISIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...AGAAATGCCAACCAGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAATGGATTATAATCCACTaGAGCAATATACTGGTACTG +
Preference number: 4 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKWIIIH*SNILVL
Trigger: CAGTACCAGTATATTGCTGCAGTGGATTATAATCCA...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS GCA 90 bp GCTCTGTGTGCCAGAGGAGTACCGAGCACTGGTGCGGGTGGTGGATaGCTTCACAGAGCTGTGCGGGCTCTCGGTCGGGAGGCCGCCACA +
Preference number: 5 (lower is better)
Translates to: ALCARGVPSTGAGGG*LHRAVRALGREAAT
Trigger: TGTGGCGGCCTCCCGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS GCA 90 bp GTCCTGTGTGCCAGAGGAGTACCGAGCACTGGTGCGGGTGGTGGATaGCTTCACAGAGCTGTGCGGGCTCTCGGTCGGGAGGCCGCCACA +
Preference number: 5 (lower is better)
Translates to: VLCARGVPSTGAGGG*LHRAVRALGREAAT
Trigger: TGTGGCGGCCTCCCGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200154.5
CDS CCA 90 bp TACGGCTCTGTGTGCCAGAGGAGTACCGAGCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGTGCGGGCTCTCGGTCGGGAGGCCGC +
Preference number: 5 (lower is better)
Translates to: YGSVCQRSTEHWCGW*MPSQSCAGSRSGGR
Trigger: GCGGCCTCCCGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGAGCCGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCGCTGGGGGATGAGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGGTCCCTCTTGTTCCCTaGGGACAGGGTCGCTCAACC +
Preference number: 5 (lower is better)
Translates to: PLGDERRLQLFVAELQPWVPLVP*GQGRST
Trigger: GGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGAC...CCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCATCCCCCAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS GCA 90 bp GAGTACCGAGCACTGGTGCGGGTGGTGGATGCCTTCACAGAGCTGTaGGGGCTCTCGGTCGGGAGGCCGCCACAGCAGTACCAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: EYRALVRVVDAFTEL*GLSVGRPPQQYQCL
Trigger: CAGACACTGGTACTGCTGTGGCGGCCTCCCGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS CCA 90 bp GAATGTCCTGTGTGCCAGAGGAGTACCGAGCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGTGCGGGCTCTCGGTCGGGAGGCCGC +
Preference number: 5 (lower is better)
Translates to: ECPVCQRSTEHWCGW*MPSQSCAGSRSGGR
Trigger: GCGGCCTCCCGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGGACATTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200154.5
CDS GCA 90 bp GAGGTGGCTTTGTCCCTCTGCTTCCGTCCTGAGGACCAGCTGCAGTaGTGCTCACGGGGCCTCGCTGGGAGGCACTGCTCGTGGTGGATA +
Preference number: 5 (lower is better)
Translates to: EVALSLCFRPEDQLQ*CSRGLAGRHCSWWI
Trigger: TATCCACCACGAGCAGTGCCTCCCAGCGAGGCCCCGTGAGCAGCACTGCAGCTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS GCA 90 bp GTGGCTTTGTCCCTCTGCTTCCGTCCTGAGGACCAGCTGCAGTGCTaGTCACGGGGCCTCGCTGGGAGGCACTGCTCGTGGTGGATATTG +
Preference number: 5 (lower is better)
Translates to: VALSLCFRPEDQLQC*SRGLAGRHCSWWIL
Trigger: CAATATCCACCACGAGCAGTGCCTCCCAGCGAGGCCCCGTGAGCAGCACTGCAGCTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 90 bp TTATACGGCTCTGTGTGCCAGAGGAGTACCGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGCTGTGCGGGCTCTCGGTCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LYGSVCQRSTEHWCG*WMPSQSCAGSRSGG
Trigger: GCCTCCCGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGAGCCGTATAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS CCA 90 bp AGTGAATGTCCTGTGTGCCAGAGGAGTACCGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGCTGTGCGGGCTCTCGGTCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SECPVCQRSTEHWCG*WMPSQSCAGSRSGG
Trigger: GCCTCCCGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGGACATTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCACGGCTGGAGGTGGCTTaGTCCCTCTGCTTCCGTCCT +
Preference number: 5 (lower is better)
Translates to: DLVHSPRPARRRGSPPCARLEVA*SLCFRP
Trigger: AGGACGGAAGCAGAGGGACAAAGCCACCTCCAGCCG...TGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS GCA 90 bp TCCTTCTTATACGGCTCTGTGTGCCAGAGGAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCACAGAGCTGTGCGGGCTCTCGGTCG +
Preference number: 5 (lower is better)
Translates to: SFLYGSVCQRSTEHW*GWWMPSQSCAGSRS
Trigger: CGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGAGCCGTATAAGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200216.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS CCA 90 bp CCGTGGAAGCCATGCACAGATACGAGGCCGTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCATCATCCCCCTTTGTGTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: PWKPCTDTRPSLLFP*DRVAQPSSPFVSEA
Trigger: GGCCTCAGACACAAAGGGGGATGATGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGACGGCCTCGTATCTGTGCATGGCTTCCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 90 bp CGTGAAGCCAGCAAGCCTGGACTGTCCCGTAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCACTGTGGCCGGGAACAGGTACCCAG +
Preference number: 5 (lower is better)
Translates to: REASKPGLSRNSCSQ*LLRRRPLWPGTGTQ
Trigger: CTGGGTACCTGTTCCCGGCCACAGTGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTTACGGGACAGTCCAGGCTTGCTGGCTTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 90 bp ACATCCTTCTTATACGGCTCTGTGTGCCAGAGGAGTACCGAGCACTaGTGCGGGTGGTGGATGCCTTCACAGAGCTGTGCGGGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: TSFLYGSVCQRSTEH*CGWWMPSQSCAGSR
Trigger: CCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGAGCCGTATAAGAAGGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200216.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GTCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCGGCTGGAGGTGGCTTaGTCCCTCTGCTTCCGTCCT +
Preference number: 5 (lower is better)
Translates to: VIFTAAAANHRFNRELELRLEVA*SLCFRP
Trigger: AGGACGGAAGCAGAGGGACAAAGCCACCTCCAGCCG...GAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp TTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGTTCTGTTTGACCGTGTaGGCAGAGAGCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: LVHSPRPARRRGSPPCAGFCLTV*AESWME
Trigger: CTCCATCCAGCTCTCTGCCAACACGGTCAAACAGAA...CCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCGGCTGGAGGTGGCTTaGTCCCTCTGCTTCCGTCCT +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPRLEVA*SLCFRP
Trigger: AGGACGGAAGCAGAGGGACAAAGCCACCTCCAGCCG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGTCTCTGTTGGGGGACTGGAGGTGGTCGTCGGCCTCGGCCGTCAGCTGGGAGCAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: ESLLGDWRWSSASAVSWEQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...CTCCCAGCTGACGGCCGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGTCTGTGTTCTCCATTaGAAAGGGGTCTGCATCGCA +
Preference number: 5 (lower is better)
Translates to: DLVHSPRPARRRGSPPCAVCVLH*KGVCIA
Trigger: TGCGATGCAGACCCCTTTCAAATGGAGAACACAGAC...TGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GAGTCTCTGTTGGGGGACTGGAGGTGGTCGTCGGCCTCGGCCGTCAGCTGGGAGAGAGTTGGTTGTCTCTaGGATTATAATCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: ESLLGDWRWSSASAVSWERVGCL*DYNPLQ
Trigger: CTGCAGTGGATTATAATCCAAGAGACAACCAACTCT...CTCCCAGCTGACGGCCGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCCGGCTGGAGGTGGCTTaGTCCCTCTGCTTCCGTCCT +
Preference number: 5 (lower is better)
Translates to: AARNMAGREGLLFVLQSLRLEVA*SLCFRP
Trigger: AGGACGGAAGCAGAGGGACAAAGCCACCTCCAGCCG...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGTCCCTCTTGTTCCCTaGGGACAGGGTCGCTCAACC +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPVPLVP*GQGRST
Trigger: GGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGAC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAAACCATCATCCCCCTTaGTGTCTGAGGCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: STVHDLHAVVVVRLAQGINHHPP*CLRPLY
Trigger: ATAAAGTGGCCTCAGACACAAAGGGGGATGATGGTT...TATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAGTCCCTCTTGTTCCCTaGGGACAGGGTCGCTCAACC +
Preference number: 5 (lower is better)
Translates to: PTAARNMAGREGLLFVLQVPLVP*GQGRST
Trigger: GGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGAC...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAGTCCCTCTTGTTCCCTaGGGACAGGGTCGCTCAACC +
Preference number: 5 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGVPLVP*GQGRST
Trigger: GGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGAC...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACCATCGCTATTGCCCCTGCTGATCTGGTAGCACATGTGGAGATGGCGGCCAGCTTCCTGCTGTTCTGTTaGACCGTGTTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: TIAIAPADLVAHVEMAASFLLFC*TVLAES
Trigger: GCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAA...GCTGGCCGCCATCTCCACATGTGCTACCAGATCAGCAGGGGCAATAGCGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS GCA 90 bp CTCACAGAGGAGCTCACGTCCCCTGCAAACACATGCCCCTTGGTGTaGTTAGCTAGTTCATTGGCCAGGCTCGCAGCATTCTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: LTEELTSPANTCPLV*LASSLARLAAFSPL
Trigger: AAGTGGAGAGAATGCTGCGAGCCTGGCCAATGAACTAGCTAAGCACACCAAGGGGCATGTGTTTGCAGGGGACGTGAGCTCCTCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGACGCTGTCTCCCAGGTaGCCTCGAATCGAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRTLSPR*PRIEEC
Trigger: ACACTCTTCGATTCGAGGCAACCTGGGAGACAGCGT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTCCCTCTTGTTCCCTaGGGACAGGGTCGCTCAACC +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVPLVP*GQGRST
Trigger: GGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATATTCTTGTGGATAGTATaGCGGTCACTTTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: STVHDLHAVVVVRLAQGIFLWIV*RSLCSP
Trigger: AGGGCTACAAAGTGACCGCAATACTATCCACAAGAA...TATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp CAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGCCGGAGAAGAGGGTTaGTTAGTAGGTAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: QTRCRSDLVHSPRPARRRAGEEG*LVGNCQ
Trigger: CTGGCAATTACCTACTAACAAACCCTCTTCTCCGGC...ACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200456.2
CDS-3UTR CAA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTGGAGCTGAAGGGGCATaGCATACAACTGTTTCAGCG +
Preference number: 5 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVGAEGA*HTTVSA
Trigger: CGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTCC...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200456.2
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGCTTGTGTCCCGGGCATaGTTCAGTGAATGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRLVSRA*FSECPG
Trigger: GCCAGGACATTCACTGAACAATGCCCGGGACACAAG...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS TCA 90 bp GTTCCCTTGGGACAGGGTCGCTCAACCATCATCCCCCTTTGTGTCTaGGGCCACTTTATCCCCTTCCAGTCTAACGCTTCGCAGAATCTC +
Preference number: 5 (lower is better)
Translates to: VPLGQGRSTIIPLCV*GHFIPFQSNASQNL
Trigger: GAGATTCTGCGAAGCGTTAGACTGGAAGGGGATAAAGTGGCCTCAGACACAAAGGGGGATGATGGTTGAGCGACCCTGTCCCAAGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS TCA 90 bp TGTGCGGGCTCTCGGTCGGGAGGCCGCCACAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTTTTCGTACTTTCTTTTGAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: CAGSRSGGRHSSTSV*STCHTLFVLSFEEH
Trigger: GTGCTCTTCAAAAGAAAGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCTGTGGCGGCCTCCCGACCGAGAGCCCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS CCA 90 bp GCCAGCCCATTCCTGCTGTTCTGTTTGACCGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCCTTTAAGCCCAGAGGGAATTTAAAG +
Preference number: 5 (lower is better)
Translates to: ASPFLLFCLTVLAES*MELPNPFKPRGNLK
Trigger: CTTTAAATTCCCTCTGGGCTTAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAATGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGCATGGAGACCCTGGTaGGTTCCAAAAGGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRAWRPW*VPKGCL
Trigger: CAGACAACCTTTTGGAACCAACCAGGGTCTCCATGC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGCATGGAGACCCTGGTaGGTTCCAAAAGGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWAWRPW*VPKGCL
Trigger: CAGACAACCTTTTGGAACCAACCAGGGTCTCCATGC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTTCTGTTTGACCGTGTaGGCAGAGAGCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWFCLTV*AESWME
Trigger: CTCCATCCAGCTCTCTGCCAACACGGTCAAACAGAA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGTTGATACAAAGGTTCTaGTGGATAGTATTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: LVHSPRPARRRGSPPCAGLIQRF*WIVLRS
Trigger: TGACCGCAATACTATCCACAAGAACCTTTGTATCAA...CCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGAGCTGAAGGGGCATaGCATACAACTGTTTCAGCG +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPGAEGA*HTTVSA
Trigger: CGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTCC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAAGATTTATGTCACCTaGGTTAAGGGTAGAAGTGCT +
Preference number: 5 (lower is better)
Translates to: LVHSPRPARRRGSPPCAGKIYVT*VKGRSA
Trigger: AGCACTTCTACCCTTAACCAAGGTGACATAAATCTT...CCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197348.5
CDS-3UTR CAA 90 bp CGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTTTCTGGTTCTTTCCTaGTTAAAGAAGACGGCTCCA +
Preference number: 5 (lower is better)
Translates to: RSDLVHSPRPARRRGSPPFLVLS*LKKTAP
Trigger: TGGAGCCGTCTTCTTTAACAAGGAAAGAACCAGAAA...AGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTATAGCCTCGCCGCTCTaGATTCTAGTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPIASPL*ILVLKS
Trigger: TGACTTGAGGACTAGAATCAAGAGCGGCGAGGCTAT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGATAGCCTCGCCGCTCTaGATTCTAGTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWIASPL*ILVLKS
Trigger: TGACTTGAGGACTAGAATCAAGAGCGGCGAGGCTAT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCATAGCCTCGCCGCTCTaGATTCTAGTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPIASPL*ILVLKS
Trigger: TGACTTGAGGACTAGAATCAAGAGCGGCGAGGCTAT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATACGCTGTCTCCCAGGTaGCCTCGAATCGAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNTLSPR*PRIEEC
Trigger: ACACTCTTCGATTCGAGGCAACCTGGGAGACAGCGT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCGGCTGGAGGTGGCTTaGTCCCTCTGCTTCCGTCCT +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLARLEVA*SLCFRP
Trigger: AGGACGGAAGCAGAGGGACAAAGCCACCTCCAGCCG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCCCTCTTGTTCCCTaGGGACAGGGTCGCTCAACC +
Preference number: 5 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLVPLVP*GQGRST
Trigger: GGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGAC...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCTCAGCTCTCAGAAGGTaGTCTACCGTGTCCACAATT +
Preference number: 5 (lower is better)
Translates to: SSSLLLPPITGLTGSLSSSALRR*STVSTI
Trigger: AATTGTGGACACGGTAGACAACCTTCTGAGAGCTGA...GGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTGTTGGTTCCAAAAGGTaGTCTGCTAGGACGAATGCT +
Preference number: 5 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRVGSKR*SARTNA
Trigger: AGCATTCGTCCTAGCAGACAACCTTTTGGAACCAAC...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GAGCTTGAGCTCCAAGTTGTGGGTTTTGTTGCCGCCCCGGAGGTTGTTGTGCACGTTGGTTCCAAAAGGTaGTCTGCTAGGACGAATGCT +
Preference number: 5 (lower is better)
Translates to: ELELQVVGFVAAPEVVVHVGSKR*SARTNA
Trigger: AGCATTCGTCCTAGCAGACAACCTTTTGGAACCAAC...GTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGCATGGAGACCCTGGTaGGTTCCAAAAGGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACAWRPW*VPKGCL
Trigger: CAGACAACCTTTTGGAACCAACCAGGGTCTCCATGC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAGCATGGAGACCCTGGTaGGTTCCAAAAGGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGAWRPW*VPKGCL
Trigger: CAGACAACCTTTTGGAACCAACCAGGGTCTCCATGC...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGAATTTAAAGTCTaGGACCTGCCCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPREFKV*DLPFRA
Trigger: AGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAGGGAATTTAAAGTCTaGGACCTGCCCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWREFKV*DLPFRA
Trigger: AGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAGGGAATTTAAAGTCTaGGACCTGCCCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPREFKV*DLPFRA
Trigger: AGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAGGGAATTTAAAGTCTaGGACCTGCCCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRREFKV*DLPFRA
Trigger: AGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTTCCTGCTGTTCTGTTaGACCGTGTTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACFLLFC*TVLAES
Trigger: GCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCACCCAGCTTTATGGTaGCGTTCTCAGTGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPHPALW*RSQCLG
Trigger: TCCTAAGCACTGAGAACGCAACCATAAAGCTGGGTG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACLVSTS*QPWVDQ
Trigger: TTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: PTAARNMAGREGLLFVLQLVSTS*QPWVDQ
Trigger: TTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAA...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAACAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: DLHAVVVVRLAQGIAVVEQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...TTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200456.2
CDS-3UTR CAA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAGGAGCTGAAGGGGCATaGCATACAACTGTTTCAGCG +
Preference number: 5 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGGAEGA*HTTVSA
Trigger: CGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTCC...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAGCTGAAGGGGCATaGCATACAACTGTTTCAGCG +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACGAEGA*HTTVSA
Trigger: CGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTCC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGTTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 5 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCTTGTGTCCCGGGCATaGTTCAGTGAATGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACLVSRA*FSECPW
Trigger: CCAAGGACATTCACTGAACAATGCCCGGGACACAAG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000195988.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS CCA 90 bp CCACGTACTCGCCCCGGCTTAGTCGCGTGTTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGCTTTCATTGTCTTGGTACACTGACC +
Preference number: 5 (lower is better)
Translates to: PRTRPGLVACCRCSQ*CSCLLRFHCLGTLT
Trigger: GGTCAGTGTACCAAGACAATGAAAGCGAAGCAGGCAAGAACACCATTGACTACATCTACAACACGCGACTAAGCCGGGGCGAGTACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGTCTGTGTTCTCCATTaGAAAGGGGTCTGCATCGCA +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACVCVLH*KGVCIA
Trigger: TGCGATGCAGACCCCTTTCAAATGGAGAACACAGAC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAATCGATTGTTGCACCTTaGAGTCATGATTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: DLHAVVVVRLAQGIAVVESIVAP*SHDFEG
Trigger: GCCTTCAAAATCATGACTCAAAGGTGCAACAATCGA...TTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGATGGTGAGTCCACAATaGCTTTCAAGGTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRMVSPQ*LSRFQD
Trigger: GTCCTGGAACCTTGAAAGCAATTGTGGACTCACCAT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCATGGTGAGTCCACAATaGCTTTCAAGGTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPMVSPQ*LSRFQD
Trigger: GTCCTGGAACCTTGAAAGCAATTGTGGACTCACCAT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTATGGTGAGTCCACAATaGCTTTCAAGGTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPMVSPQ*LSRFQD
Trigger: GTCCTGGAACCTTGAAAGCAATTGTGGACTCACCAT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGATGGTGAGTCCACAATaGCTTTCAAGGTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWMVSPQ*LSRFQD
Trigger: GTCCTGGAACCTTGAAAGCAATTGTGGACTCACCAT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGACTCGGTTTGGAAGTTaGTATGTTGTTGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRTRFGS*YVVVWR
Trigger: CCGCCAGACAACAACATACAAACTTCCAAACCGAGT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCACGCTGTCTCCCAGGTaGCCTCGAATCGAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSTLSPR*PRIEEC
Trigger: ACACTCTTCGATTCGAGGCAACCTGGGAGACAGCGT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACGGCTGGAGGTGGCTTaGTCCCTCTGCTTCCGTCCT +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRLEVA*SLCFRP
Trigger: AGGACGGAAGCAGAGGGACAAAGCCACCTCCAGCCG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAACCATCATCCCCCTTaGTGTCTGAGGCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRNHHPP*CLRPLY
Trigger: ATAAAGTGGCCTCAGACACAAAGGGGGATGATGGTT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAACCATCATCCCCCTTaGTGTCTGAGGCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPNHHPP*CLRPLY
Trigger: ATAAAGTGGCCTCAGACACAAAGGGGGATGATGGTT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAACCATCATCCCCCTTaGTGTCTGAGGCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWNHHPP*CLRPLY
Trigger: ATAAAGTGGCCTCAGACACAAAGGGGGATGATGGTT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGTCCCTCTTGTTCCCTaGGGACAGGGTCGCTCAACC +
Preference number: 5 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCVPLVP*GQGRST
Trigger: GGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGAC...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTCAGCTCTCAGAAGGTaGTCTACCGTGTCCACAATT +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRSALRR*STVSTI
Trigger: AATTGTGGACACGGTAGACAACCTTCTGAGAGCTGA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCAGCTCTCAGAAGGTaGTCTACCGTGTCCACAATT +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPSALRR*STVSTI
Trigger: AATTGTGGACACGGTAGACAACCTTCTGAGAGCTGA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTCAGCTCTCAGAAGGTaGTCTACCGTGTCCACAATT +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWSALRR*STVSTI
Trigger: AATTGTGGACACGGTAGACAACCTTCTGAGAGCTGA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGTTGGTTCCAAAAGGTaGTCTGCTAGGACGAATGCT +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPVGSKR*SARTNA
Trigger: AGCATTCGTCCTAGCAGACAACCTTTTGGAACCAAC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGTTGGTTCCAAAAGGTaGTCTGCTAGGACGAATGCT +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPVGSKR*SARTNA
Trigger: AGCATTCGTCCTAGCAGACAACCTTTTGGAACCAAC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTTCTGTTTGACCGTGTaGGCAGAGAGCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNFCLTV*AESWME
Trigger: CTCCATCCAGCTCTCTGCCAACACGGTCAAACAGAA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTTCCTGCTGTTCTGTTaGACCGTGTTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNFLLFC*TVLAES
Trigger: GCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCACCCAGCTTTATGGTaGCGTTCTCAGTGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACHPALW*RSQCLG
Trigger: TCCTAAGCACTGAGAACGCAACCATAAAGCTGGGTG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTCTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: RSDLVHSPRPARRRGSPPLVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...AGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCGCCGGAGAAGAGGGTTaGTTAGTAGGTAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: AARNMAGREGLLFVLQSLAGEEG*LVGNCQ
Trigger: CTGGCAATTACCTACTAACAAACCCTCTTCTCCGGC...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS GCA 90 bp TTCCAAAGCCTCAGCTCTCAGAAGGTTGTCTACCGTGTCCACAATTaGCTTGTTATAGCTCCTCCCAGCCGAATCCTTCTCACTCGGCTT +
Preference number: 5 (lower is better)
Translates to: FQSLSSQKVVYRVHN*LVIAPPSRILLTRL
Trigger: AAGCCGAGTGAGAAGGATTCGGCTGGGAGGAGCTATAACAAGGCAATTGTGGACACGGTAGACAACCTTCTGAGAGCTGAGGCTTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCTTCCCGGACGTCCCCCTCAGGGATGCACCCTTCTTTGTTAATGGGGATGATGTCGATTGTTGCACCTTaGAGTCATGATTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: PSRTSPSGMHPSLLMGMMSIVAP*SHDFEG
Trigger: GCCTTCAAAATCATGACTCAAAGGTGCAACAATCGA...CATCATCCCCATTAACAAAGAAGGGTGCATCCCTGAGGGGGACGTCCGGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGACTCGGTTTGGAAGTTaGTATGTTGTTGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQTRFGS*YVVVWR
Trigger: CCGCCAGACAACAACATACAAACTTCCAAACCGAGT...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTACTCGGTTTGGAAGTTaGTATGTTGTTGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACTRFGS*YVVVWR
Trigger: CCGCCAGACAACAACATACAAACTTCCAAACCGAGT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATATAGCCTCGCCGCTCTaGATTCTAGTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNIASPL*ILVLKS
Trigger: TGACTTGAGGACTAGAATCAAGAGCGGCGAGGCTAT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTACGCTGTCTCCCAGGTaGCCTCGAATCGAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLTLSPR*PRIEEC
Trigger: ACACTCTTCGATTCGAGGCAACCTGGGAGACAGCGT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ATCGCGTCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGGTGGATATTGTGGTTTaGAACAGCTCAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: IASSSLLLPPITGLTGSLVDIVV*NSSAEE
Trigger: TTCTTCAGCTGAGCTGTTCAAAACCACAATATCCAC...CAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGTTGGTTCCAAAAGGTaGTCTGCTAGGACGAATGCT +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACVGSKR*SARTNA
Trigger: AGCATTCGTCCTAGCAGACAACCTTTTGGAACCAAC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGCATGGAGACCCTGGTaGGTTCCAAAAGGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSAWRPW*VPKGCL
Trigger: CAGACAACCTTTTGGAACCAACCAGGGTCTCCATGC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCACCCAGCTTTATGGTaGCGTTCTCAGTGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: TAARNMAGREGLLFVLQSHPALW*RSQCLG
Trigger: TCCTAAGCACTGAGAACGCAACCATAAAGCTGGGTG...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCACCCAGCTTTATGGTaGCGTTCTCAGTGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNHPALW*RSQCLG
Trigger: TCCTAAGCACTGAGAACGCAACCATAAAGCTGGGTG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTTCTTGTGGATAGTATaGCGGTCACTTTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPFLWIV*RSLCSP
Trigger: AGGGCTACAAAGTGACCGCAATACTATCCACAAGAA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTTCTTGTGGATAGTATaGCGGTCACTTTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWFLWIV*RSLCSP
Trigger: AGGGCTACAAAGTGACCGCAATACTATCCACAAGAA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGCAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGCCGGAGAAGAGGGTTaGTTAGTAGGTAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNAGEEG*LVGNCQ
Trigger: CTGGCAATTACCTACTAACAAACCCTCTTCTCCGGC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCATTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 5 (lower is better)
Translates to: NMAGREGLLFVLQSLYTALPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCTTGTGTCCCGGGCATaGTTCAGTGAATGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSLVSRA*FSECPW
Trigger: CCAAGGACATTCACTGAACAATGCCCGGGACACAAG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000195988.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTCGATTGTTGCACCTTaGAGTCATGATTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRSIVAP*SHDFEG
Trigger: GCCTTCAAAATCATGACTCAAAGGTGCAACAATCGA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTCGATTGTTGCACCTTaGAGTCATGATTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWSIVAP*SHDFEG
Trigger: GCCTTCAAAATCATGACTCAAAGGTGCAACAATCGA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCGATTGTTGCACCTTaGAGTCATGATTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPSIVAP*SHDFEG
Trigger: GCCTTCAAAATCATGACTCAAAGGTGCAACAATCGA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTCGATTGTTGCACCTTaGAGTCATGATTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSIVAP*SHDFEG
Trigger: GCCTTCAAAATCATGACTCAAAGGTGCAACAATCGA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGATGGTGAGTCCACAATaGCTTTCAAGGTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQMVSPQ*LSRFQD
Trigger: GTCCTGGAACCTTGAAAGCAATTGTGGACTCACCAT...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATACTCGGTTTGGAAGTTaGTATGTTGTTGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNTRFGS*YVVVWR
Trigger: CCGCCAGACAACAACATACAAACTTCCAAACCGAGT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTTTCTGGTTCTTTCCTaGTTAAAGAAGACGGCTCCA +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPFLVLS*LKKTAP
Trigger: TGGAGCCGTCTTCTTTAACAAGGAAAGAACCAGAAA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTTTCTGGTTCTTTCCTaGTTAAAGAAGACGGCTCCA +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWFLVLS*LKKTAP
Trigger: TGGAGCCGTCTTCTTTAACAAGGAAAGAACCAGAAA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGTGGATATTGTGGTTTaGAACAGCTCAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRVDIVV*NSSAEE
Trigger: TTCTTCAGCTGAGCTGTTCAAAACCACAATATCCAC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTGGATATTGTGGTTTaGAACAGCTCAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVDIVV*NSSAEE
Trigger: TTCTTCAGCTGAGCTGTTCAAAACCACAATATCCAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATAACCATCATCCCCCTTaGTGTCTGAGGCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNNHHPP*CLRPLY
Trigger: ATAAAGTGGCCTCAGACACAAAGGGGGATGATGGTT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGTCCCTCTTGTTCCCTaGGGACAGGGTCGCTCAACC +
Preference number: 5 (lower is better)
Translates to: RLYQLILACGPRNSLAVLVPLVP*GQGRST
Trigger: GGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGAC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGTCTTCTCTCGTTTTaGGAGCTTGTTATAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPCLLSF*ELVIAP
Trigger: AGGAGCTATAACAAGCTCCAAAAACGAGAGAAGACA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTGTCTTCTCTCGTTTTaGGAGCTTGTTATAGCTCCT +
Preference number: 5 (lower is better)
Translates to: AAGPHWQRLYQLILACGPCLLSF*ELVIAP
Trigger: AGGAGCTATAACAAGCTCCAAAAACGAGAGAAGACA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTTGGTTCCAAAAGGTaGTCTGCTAGGACGAATGCT +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVGSKR*SARTNA
Trigger: AGCATTCGTCCTAGCAGACAACCTTTTGGAACCAAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGTTCTGTTTGACCGTGTaGGCAGAGAGCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVFCLTV*AESWME
Trigger: CTCCATCCAGCTCTCTGCCAACACGGTCAAACAGAA...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACATTCCTGCTGTTCTGTTaGACCGTGTTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTFLLFC*TVLAES
Trigger: GCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAA...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCATTCCTGCTGTTCTGTTaGACCGTGTTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: NMAGREGLLFVLQSLYTAFLLFC*TVLAES
Trigger: GCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAA...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGCTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: FSNAVSFRLSPQSTTCTPLVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...CGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp TTTTCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: FSQTRCRSDLVHSPRPARQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...GCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200456.2
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGCCGGAGAAGAGGGTTaGTTAGTAGGTAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSAGEEG*LVGNCQ
Trigger: CTGGCAATTACCTACTAACAAACCCTCTTCTCCGGC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGGGAGCTGAAGGGGCATaGCATACAACTGTTTCAGCG +
Preference number: 5 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVGAEGA*HTTVSA
Trigger: CGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTCC...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR CAA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACGGAGCTGAAGGGGCATaGCATACAACTGTTTCAGCG +
Preference number: 5 (lower is better)
Translates to: KEHGREGGSLVCFTISLHGAEGA*HTTVSA
Trigger: CGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTCC...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR CAA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCACTTGTGTCCCGGGCATaGTTCAGTGAATGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPLVSRA*FSECPG
Trigger: GCCAGGACATTCACTGAACAATGCCCGGGACACAAG...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCTTGTGTCCCGGGCATaGTTCAGTGAATGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLALVSRA*FSECPG
Trigger: GCCAGGACATTCACTGAACAATGCCCGGGACACAAG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLAKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGACACACAAAGACTTTTaGCTCCATGTAAGGGACACA +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRTHKDF*LHVRDT
Trigger: TGTGTCCCTTACATGGAGCAAAAAGTCTTTGTGTGT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
CDS TCA 90 bp ATGTCTTGTCTCTCTGTAGGTTGCTGGCGAGTTAAACGCAGGAGCTaGAGGGGCATTGCATACAACTGTTTCAGCGAGCAGGGTGTTATA +
Preference number: 5 (lower is better)
Translates to: MSCLSVGCWRVKRRS*RGIAYNCFSEQGVI
Trigger: TATAACACCCTGCTCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTCCTGCGTTTAACTCGCCAGCAACCTACAGAGAGACAAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198139.5
CDS GCA 90 bp GCTCCTTCTTCCAAGGTATCCAACAACATTGTGGCTGTGTGCGCCTaGTCTGAAGAATTCATGTGTTTCCAGGATTCCAAAGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: APSSKVSNNIVAVCA*SEEFMCFQDSKASA
Trigger: AGCTGAGGCTTTGGAATCCTGGAAACACATGAATTCTTCAGAGCAGGCGCACACAGCCACAATGTTGTTGGATACCTTGGAAGAAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 90 bp ATGGAGCTGCCCAACCCCTTTAAGCCCAGAGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTGAGGACAGCAACTTCTAAAACAATA +
Preference number: 5 (lower is better)
Translates to: MELPNPFKPRGNLKS*TCPSVLRTATSKTI
Trigger: TATTGTTTTAGAAGTTGCTGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCTCTGGGCTTAAAGGGGTTGGGCAGCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 90 bp CCAGAAGGAGCAGTTTGCATTGAAATAATTGTCAGGATCAATGTGTaGCAGTGTGAAAAGCACGGGATCTGTCAGGTACACGCGGCTGGA +
Preference number: 5 (lower is better)
Translates to: PEGAVCIEIIVRINV*QCEKHGICQVHAAG
Trigger: TCCAGCCGCGTGTACCTGACAGATCCCGTGCTTTTCACACTGCCACACATTGATCCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCACTCGGTTTGGAAGTTaGTATGTTGTTGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSTRFGS*YVVVWR
Trigger: CCGCCAGACAACAACATACAAACTTCCAAACCGAGT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTTTCTGGTTCTTTCCTaGTTAAAGAAGACGGCTCCA +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACFLVLS*LKKTAP
Trigger: TGGAGCCGTCTTCTTTAACAAGGAAAGAACCAGAAA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAACGCTGTCTCCCAGGTaGCCTCGAATCGAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVTLSPR*PRIEEC
Trigger: ACACTCTTCGATTCGAGGCAACCTGGGAGACAGCGT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTTCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCAGAGTTGGTTGTCTCTaGGATTATAATCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: FSQTRCRSDLVHSPRPARRVGCL*DYNPLQ
Trigger: CTGCAGTGGATTATAATCCAAGAGACAACCAACTCT...GCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAAGAGTTGGTTGTCTCTaGGATTATAATCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGRVGCL*DYNPLQ
Trigger: CTGCAGTGGATTATAATCCAAGAGACAACCAACTCT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGTGGATATTGTGGTTTaGAACAGCTCAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACVDIVV*NSSAEE
Trigger: TTCTTCAGCTGAGCTGTTCAAAACCACAATATCCAC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCTGGTTGGCATTTCTCGGCTGGAGGTGGCTTaGTCCCTCTGCTTCCGTCCT +
Preference number: 5 (lower is better)
Translates to: FTISLHSSRNVKYLVGISRLEVA*SLCFRP
Trigger: AGGACGGAAGCAGAGGGACAAAGCCACCTCCAGCCG...AGAAATGCCAACCAGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTGTCTTCTCTCGTTTTaGGAGCTTGTTATAGCTCCT +
Preference number: 5 (lower is better)
Translates to: AARNMAGREGLLFVLQSLCLLSF*ELVIAP
Trigger: AGGAGCTATAACAAGCTCCAAAAACGAGAGAAGACA...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTCAGCTCTCAGAAGGTaGTCTACCGTGTCCACAATT +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSSALRR*STVSTI
Trigger: AATTGTGGACACGGTAGACAACCTTCTGAGAGCTGA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAGCATGGAGACCCTGGTaGGTTCCAAAAGGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKAWRPW*VPKGCL
Trigger: CAGACAACCTTTTGGAACCAACCAGGGTCTCCATGC...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGCATGGAGACCCTGGTaGGTTCCAAAAGGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLAAWRPW*VPKGCL
Trigger: CAGACAACCTTTTGGAACCAACCAGGGTCTCCATGC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCATGGAGACCCTGGTaGGTTCCAAAAGGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCAWRPW*VPKGCL
Trigger: CAGACAACCTTTTGGAACCAACCAGGGTCTCCATGC...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGAGGGAATTTAAAGTCTaGGACCTGCCCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVREFKV*DLPFRA
Trigger: AGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCT...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTTCCTGCTGTTCTGTTaGACCGTGTTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLAFLLFC*TVLAES
Trigger: GCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLALVSTS*QPWVDQ
Trigger: TTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTTCTTGTGGATAGTATaGCGGTCACTTTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNFLWIV*RSLCSP
Trigger: AGGGCTACAAAGTGACCGCAATACTATCCACAAGAA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTTGATACAAAGGTTCTaGTGGATAGTATTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: AGPHWQRLYQLILACGPRLIQRF*WIVLRS
Trigger: TGACCGCAATACTATCCACAAGAACCTTTGTATCAA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: GSCRAPLAASLSINTCMWLVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: SCRAPLAASLSINTCMWPLVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ATCAAAGATGAGGCGTCAGCCACAATCGCGTCATCTTCACTGCTGCTGCCGCCACTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: IKDEASATIASSSLLLPPLVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...TGGCGGCAGCAGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGGAGCTGAAGGGGCATaGCATACAACTGTTTCAGCG +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLAGAEGA*HTTVSA
Trigger: CGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTCC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTTGTGTCCCGGGCATaGTTCAGTGAATGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVLVSRA*FSECPG
Trigger: GCCAGGACATTCACTGAACAATGCCCGGGACACAAG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: LCSRINRGVTQDLQISPHNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAACTTGTGTCCCGGGCATaGTTCAGTGAATGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKLVSRA*FSECPW
Trigger: CCAAGGACATTCACTGAACAATGCCCGGGACACAAG...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200543.5
CDS GCA 90 bp ACGAATGCTCCTTCTTCCAAGGTATCCAACAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTCATGTGTTTCCAGGATTCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: TNAPSSKVSNNIVAV*ACSEEFMCFQDSKA
Trigger: GGCTTTGGAATCCTGGAAACACATGAATTCTTCAGAGCAGGCGCACACAGCCACAATGTTGTTGGATACCTTGGAAGAAGGAGCATTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 90 bp CTGCTAGGACGAATGCTCCTTCTTCCAAGGTATCCAACAACATTGTaGCTGTGTGCGCCTGCTCTGAAGAATTCATGTGTTTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: LLGRMLLLPRYPTTL*LCAPALKNSCVSRI
Trigger: AATCCTGGAAACACATGAATTCTTCAGAGCAGGCGCACACAGCCACAATGTTGTTGGATACCTTGGAAGAAGGAGCATTCGTCCTAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 90 bp TACGCAATTTCCCTGTGGGCCATGAGAATAGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTGCGAGTTTTATTAGTGTCAACCAGC +
Preference number: 5 (lower is better)
Translates to: YAISLWAMRIAKLVR*LQAHVVRVLLVSTS
Trigger: GCTGGTTGACACTAATAAAACTCGCACAACGTGCGCTTGCAGCCACCTAACCAATTTTGCTATTCTCATGGCCCACAGGGAAATTGCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAGTCTGTGTTCTCCATTaGAAAGGGGTCTGCATCGCA +
Preference number: 5 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPVCVLH*KGVCIA
Trigger: TGCGATGCAGACCCCTTTCAAATGGAGAACACAGAC...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCGATTGTTGCACCTTaGAGTCATGATTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNSIVAP*SHDFEG
Trigger: GCCTTCAAAATCATGACTCAAAGGTGCAACAATCGA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTACTCGGTTTGGAAGTTaGTATGTTGTTGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLTRFGS*YVVVWR
Trigger: CCGCCAGACAACAACATACAAACTTCCAAACCGAGT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGACTCGGTTTGGAAGTTaGTATGTTGTTGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVTRFGS*YVVVWR
Trigger: CCGCCAGACAACAACATACAAACTTCCAAACCGAGT...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTATAGCCTCGCCGCTCTaGATTCTAGTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFIASPL*ILVLKS
Trigger: TGACTTGAGGACTAGAATCAAGAGCGGCGAGGCTAT...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTATAGCCTCGCCGCTCTaGATTCTAGTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCIASPL*ILVLKS
Trigger: TGACTTGAGGACTAGAATCAAGAGCGGCGAGGCTAT...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATACGCTGTCTCCCAGGTaGCCTCGAATCGAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYTLSPR*PRIEEC
Trigger: ACACTCTTCGATTCGAGGCAACCTGGGAGACAGCGT...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTAGAGTTGGTTGTCTCTaGGATTATAATCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: TAARNMAGREGLLFVLQSRVGCL*DYNPLQ
Trigger: CTGCAGTGGATTATAATCCAAGAGACAACCAACTCT...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATAGAGTTGGTTGTCTCTaGGATTATAATCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNRVGCL*DYNPLQ
Trigger: CTGCAGTGGATTATAATCCAAGAGACAACCAACTCT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTGGATATTGTGGTTTaGAACAGCTCAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVDIVV*NSSAEE
Trigger: TTCTTCAGCTGAGCTGTTCAAAACCACAATATCCAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGAGTCCCTCTTGTTCCCTaGGGACAGGGTCGCTCAACC +
Preference number: 5 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGVPLVP*GQGRST
Trigger: GGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGAC...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTAGGGAATTTAAAGTCTaGGACCTGCCCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFREFKV*DLPFRA
Trigger: AGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCT...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCAGGGAATTTAAAGTCTaGGACCTGCCCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLAREFKV*DLPFRA
Trigger: AGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATTCTGTTTGACCGTGTaGGCAGAGAGCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVFCLTV*AESWME
Trigger: CTCCATCCAGCTCTCTGCCAACACGGTCAAACAGAA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATTCTGTTTGACCGTGTaGGCAGAGAGCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLFCLTV*AESWME
Trigger: CTCCATCCAGCTCTCTGCCAACACGGTCAAACAGAA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATTCCTGCTGTTCTGTTaGACCGTGTTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVFLLFC*TVLAES
Trigger: GCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVLVSTS*QPWVDQ
Trigger: TTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAACTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: PTAARNMAGREGLLFVLQLVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: EGAAGPHWQRLYQLILACLVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGCCGGAGAAGAGGGTTaGTTAGTAGGTAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLAAGEEG*LVGNCQ
Trigger: CTGGCAATTACCTACTAACAAACCCTCTTCTCCGGC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACTTGTGTCCCGGGCATaGTTCAGTGAATGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: RLYQLILACGPRNSLAVLLVSRA*FSECPG
Trigger: GCCAGGACATTCACTGAACAATGCCCGGGACACAAG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGTCTGTGTTCTCCATTaGAAAGGGGTCTGCATCGCA +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLVCVLH*KGVCIA
Trigger: TGCGATGCAGACCCCTTTCAAATGGAGAACACAGAC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAAATGGTGAGTCCACAATaGCTTTCAAGGTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQMVSPQ*LSRFQD
Trigger: GTCCTGGAACCTTGAAAGCAATTGTGGACTCACCAT...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCACTCGGTTTGGAAGTTaGTATGTTGTTGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLATRFGS*YVVVWR
Trigger: CCGCCAGACAACAACATACAAACTTCCAAACCGAGT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTTCTGGTTCTTTCCTaGTTAAAGAAGACGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSFLVLS*LKKTAP
Trigger: TGGAGCCGTCTTCTTTAACAAGGAAAGAACCAGAAA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAATAGCCTCGCCGCTCTaGATTCTAGTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLIASPL*ILVLKS
Trigger: TGACTTGAGGACTAGAATCAAGAGCGGCGAGGCTAT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTAACCATCATCCCCCTTaGTGTCTGAGGCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCNHHPP*CLRPLY
Trigger: ATAAAGTGGCCTCAGACACAAAGGGGGATGATGGTT...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTTCAGCTCTCAGAAGGTaGTCTACCGTGTCCACAATT +
Preference number: 5 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCSALRR*STVSTI
Trigger: AATTGTGGACACGGTAGACAACCTTCTGAGAGCTGA...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTCAGCTCTCAGAAGGTaGTCTACCGTGTCCACAATT +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLASALRR*STVSTI
Trigger: AATTGTGGACACGGTAGACAACCTTCTGAGAGCTGA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAAGCATGGAGACCCTGGTaGGTTCCAAAAGGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKAWRPW*VPKGCL
Trigger: CAGACAACCTTTTGGAACCAACCAGGGTCTCCATGC...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACAAGGGAATTTAAAGTCTaGGACCTGCCCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTREFKV*DLPFRA
Trigger: AGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCT...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTCTGTTTGACCGTGTaGGCAGAGAGCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: RLYQLILACGPRNSLAVLFCLTV*AESWME
Trigger: CTCCATCCAGCTCTCTGCCAACACGGTCAAACAGAA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTCCTGCTGTTCTGTTaGACCGTGTTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: RLYQLILACGPRNSLAVLFLLFC*TVLAES
Trigger: GCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACACCCAGCTTTATGGTaGCGTTCTCAGTGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVHPALW*RSQCLG
Trigger: TCCTAAGCACTGAGAACGCAACCATAAAGCTGGGTG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTAAAGACTTGTCACTTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: ILACGPRNSLAVLLKTCHLVSTS*QPWVDQ
Trigger: TTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAA...GTGACAAGTCTTTAATAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CAA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTCTTGTGGATAGTATaGCGGTCACTTTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: LCSRINRGVTQDLQISPHFLWIV*RSLCSP
Trigger: AGGGCTACAAAGTGACCGCAATACTATCCACAAGAA...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTTTCTTGTGGATAGTATaGCGGTCACTTTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLFLWIV*RSLCSP
Trigger: AGGGCTACAAAGTGACCGCAATACTATCCACAAGAA...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTTGATACAAAGGTTCTaGTGGATAGTATTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: GPHWQRLYQLILACGPRNLIQRF*WIVLRS
Trigger: TGACCGCAATACTATCCACAAGAACCTTTGTATCAA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGCCGGAGAAGAGGGTTaGTTAGTAGGTAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVAGEEG*LVGNCQ
Trigger: CTGGCAATTACCTACTAACAAACCCTCTTCTCCGGC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACAGCCGGAGAAGAGGGTTaGTTAGTAGGTAATTGCCAG +
Preference number: 5 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTAGEEG*LVGNCQ
Trigger: CTGGCAATTACCTACTAACAAACCCTCTTCTCCGGC...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR CAA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCACCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACAAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCACACACAAAGACTTTTaGCTCCATGTAAGGGACACA +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSTHKDF*LHVRDT
Trigger: TGTGTCCCTTACATGGAGCAAAAAGTCTTTGTGTGT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACTACCGTGTCCACAATaGCCTTGTTATAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLLPCPQ*PCYSSS
Trigger: GGAGGAGCTATAACAAGGCAATTGTGGACACGGTAG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAATGGTGAGTCCACAATaGCTTTCAAGGTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLMVSPQ*LSRFQD
Trigger: GTCCTGGAACCTTGAAAGCAATTGTGGACTCACCAT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACTTTCTGGTTCTTTCCTaGTTAAAGAAGACGGCTCCA +
Preference number: 5 (lower is better)
Translates to: KEHGREGGSLVCFTISLHFLVLS*LKKTAP
Trigger: TGGAGCCGTCTTCTTTAACAAGGAAAGAACCAGAAA...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAATAGCCTCGCCGCTCTaGATTCTAGTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: RLYQLILACGPRNSLAVLIASPL*ILVLKS
Trigger: TGACTTGAGGACTAGAATCAAGAGCGGCGAGGCTAT...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACACGCTGTCTCCCAGGTaGCCTCGAATCGAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: ETLPILCNQELDTIFSPNTLSPR*PRIEEC
Trigger: ACACTCTTCGATTCGAGGCAACCTGGGAGACAGCGT...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAAACCATCATCCCCCTTaGTGTCTGAGGCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVNHHPP*CLRPLY
Trigger: ATAAAGTGGCCTCAGACACAAAGGGGGATGATGGTT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCATGTCTTCTCTCGTTTTaGGAGCTTGTTATAGCTCCT +
Preference number: 5 (lower is better)
Translates to: NMAGREGLLFVLQSLYTACLLSF*ELVIAP
Trigger: AGGAGCTATAACAAGCTCCAAAAACGAGAGAAGACA...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATCAGCTCTCAGAAGGTaGTCTACCGTGTCCACAATT +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLSALRR*STVSTI
Trigger: AATTGTGGACACGGTAGACAACCTTCTGAGAGCTGA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGTTGGTTCCAAAAGGTaGTCTGCTAGGACGAATGCT +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVVGSKR*SARTNA
Trigger: AGCATTCGTCCTAGCAGACAACCTTTTGGAACCAAC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTTCTTGTGGATAGTATaGCGGTCACTTTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFFLWIV*RSLCSP
Trigger: AGGGCTACAAAGTGACCGCAATACTATCCACAAGAA...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTGATACAAAGGTTCTaGTGGATAGTATTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSLIQRF*WIVLRS
Trigger: TGACCGCAATACTATCCACAAGAACCTTTGTATCAA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: PHWQRLYQLILACGPRNSLVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTCAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLAQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACCCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: ETLPILCNQELDTIFSPNPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCTGGTTGGCATTTCTTTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 5 (lower is better)
Translates to: FTISLHSSRNVKYLVGISLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...AGAAATGCCAACCAGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGATTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 5 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTTTCTGGTTCTTTCCTaGTTAAAGAAGACGGCTCCA +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLAFLVLS*LKKTAP
Trigger: TGGAGCCGTCTTCTTTAACAAGGAAAGAACCAGAAA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTACGCTGTCTCCCAGGTaGCCTCGAATCGAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: LPILCNQELDTIFSPNSFTLSPR*PRIEEC
Trigger: ACACTCTTCGATTCGAGGCAACCTGGGAGACAGCGT...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGTAAAAGGTTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTAGAGTTGGTTGTCTCTaGGATTATAATCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: CKRFAGKCKRVQNLSPAFRVGCL*DYNPLQ
Trigger: CTGCAGTGGATTATAATCCAAGAGACAACCAACTCT...AAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAACCTTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCAGAGTTGGTTGTCTCTaGGATTATAATCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLARVGCL*DYNPLQ
Trigger: CTGCAGTGGATTATAATCCAAGAGACAACCAACTCT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTGTGGATATTGTGGTTTaGAACAGCTCAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFVDIVV*NSSAEE
Trigger: TTCTTCAGCTGAGCTGTTCAAAACCACAATATCCAC...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACAGGGAATTTAAAGTCTaGGACCTGCCCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYREFKV*DLPFRA
Trigger: AGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCT...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTTCTGTTTGACCGTGTaGGCAGAGAGCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: ETLPILCNQELDTIFSPNFCLTV*AESWME
Trigger: CTCCATCCAGCTCTCTGCCAACACGGTCAAACAGAA...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATTCCTGCTGTTCTGTTaGACCGTGTTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIFLLFC*TVLAES
Trigger: GCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTTCCTGCTGTTCTGTTaGACCGTGTTGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSFLLFC*TVLAES
Trigger: GCTCTCTGCCAACACGGTCAAACAGAACAGCAGGAA...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCACACCCAGCTTTATGGTaGCGTTCTCAGTGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSHPALW*RSQCLG
Trigger: TCCTAAGCACTGAGAACGCAACCATAAAGCTGGGTG...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSLVSTS*QPWVDQ
Trigger: TTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAA...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAATTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLELVSTS*QPWVDQ
Trigger: TTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAA...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGATTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGLVSTS*QPWVDQ
Trigger: TTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAA...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATTCTTGTGGATAGTATaGCGGTCACTTTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVFLWIV*RSLCSP
Trigger: AGGGCTACAAAGTGACCGCAATACTATCCACAAGAA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCACTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: NMAGREGLLFVLQSLYTALVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 5 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: EEETLPILCNQELDTIFSKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCACACACAAAGACTTTTaGCTCCATGTAAGGGACACA +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLATHKDF*LHVRDT
Trigger: TGTGTCCCTTACATGGAGCAAAAAGTCTTTGTGTGT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
CDS-3UTR CAA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTACACACAAAGACTTTTaGCTCCATGTAAGGGACACA +
Preference number: 5 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFTHKDF*LHVRDT
Trigger: TGTGTCCCTTACATGGAGCAAAAAGTCTTTGTGTGT...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000197567.5
CDS-3UTR CAA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGCTACCGTGTCCACAATaGCCTTGTTATAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQLPCPQ*PCYSSS
Trigger: GGAGGAGCTATAACAAGGCAATTGTGGACACGGTAG...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTTGTTCAGTGAATGTCTaGTCTCTCTGTAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSCSVNV*SLCRLL
Trigger: CAGCAACCTACAGAGAGACAAGACATTCACTGAACA...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198139.5
CDS-3UTR CAA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACCTTGTGTCCCGGGCATaGTTCAGTGAATGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYLVSRA*FSECLV
Trigger: GACAAGACATTCACTGAACAATGCCCGGGACACAAG...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198139.5
CDS-3UTR CAA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGAGTCTGTGTTCTCCATTaGAAAGGGGTCTGCATCGCA +
Preference number: 5 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGVCVLH*KGVCIA
Trigger: TGCGATGCAGACCCCTTTCAAATGGAGAACACAGAC...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATGGTGAGTCCACAATaGCTTTCAAGGTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSMVSPQ*LSRFQD
Trigger: GTCCTGGAACCTTGAAAGCAATTGTGGACTCACCAT...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACATGGTGAGTCCACAATaGCTTTCAAGGTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYMVSPQ*LSRFQD
Trigger: GTCCTGGAACCTTGAAAGCAATTGTGGACTCACCAT...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACTCGGTTTGGAAGTTaGTATGTTGTTGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQTRFGS*YVVVWR
Trigger: CCGCCAGACAACAACATACAAACTTCCAAACCGAGT...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATTTCTGGTTCTTTCCTaGTTAAAGAAGACGGCTCCA +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVFLVLS*LKKTAP
Trigger: TGGAGCCGTCTTCTTTAACAAGGAAAGAACCAGAAA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCATAGCCTCGCCGCTCTaGATTCTAGTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLIASPL*ILVLKS
Trigger: TGACTTGAGGACTAGAATCAAGAGCGGCGAGGCTAT...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAAGAGTTGGTTGTCTCTaGGATTATAATCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRVGCL*DYNPLQ
Trigger: CTGCAGTGGATTATAATCCAAGAGACAACCAACTCT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATGTCTTCTCTCGTTTTaGGAGCTTGTTATAGCTCCT +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVCLLSF*ELVIAP
Trigger: AGGAGCTATAACAAGCTCCAAAAACGAGAGAAGACA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CAA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGAAGGGAATTTAAAGTCTaGGACCTGCCCTTCCGTGCT +
Preference number: 5 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGREFKV*DLPFRA
Trigger: AGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCCT...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTTTCTGTTTGACCGTGTaGGCAGAGAGCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: ISLLLFQVLSGKVRYSQFFCLTV*AESWME
Trigger: CTCCATCCAGCTCTCTGCCAACACGGTCAAACAGAA...AAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCTGGTTGGCATTTCTCACCCAGCTTTATGGTaGCGTTCTCAGTGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: FTISLHSSRNVKYLVGISHPALW*RSQCLG
Trigger: TCCTAAGCACTGAGAACGCAACCATAAAGCTGGGTG...AGAAATGCCAACCAGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATACACCCAGCTTTATGGTaGCGTTCTCAGTGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIHPALW*RSQCLG
Trigger: TCCTAAGCACTGAGAACGCAACCATAAAGCTGGGTG...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTTTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAA +
Preference number: 5 (lower is better)
Translates to: EEETLPILCNQELDTIFSLVSTS*QPWVDQ
Trigger: TTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAA...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTCTTGTGGATAGTATaGCGGTCACTTTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: RLYQLILACGPRNSLAVLFLWIV*RSLCSP
Trigger: AGGGCTACAAAGTGACCGCAATACTATCCACAAGAA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: WQRLYQLILACGPRNSLALVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: RLYQLILACGPRNSLAVLQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAACACACAAAGACTTTTaGCTCCATGTAAGGGACACA +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVTHKDF*LHVRDT
Trigger: TGTGTCCCTTACATGGAGCAAAAAGTCTTTGTGTGT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
CDS-3UTR CAA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGACTACCGTGTCCACAATaGCCTTGTTATAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGLPCPQ*PCYSSS
Trigger: GGAGGAGCTATAACAAGGCAATTGTGGACACGGTAG...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTCTACCGTGTCCACAATaGCCTTGTTATAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSLPCPQ*PCYSSS
Trigger: GGAGGAGCTATAACAAGGCAATTGTGGACACGGTAG...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTCGATTGTTGCACCTTaGAGTCATGATTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYSIVAP*SHDFEG
Trigger: GCCTTCAAAATCATGACTCAAAGGTGCAACAATCGA...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTATAGCCTCGCCGCTCTaGATTCTAGTCCTCAAGTCA +
Preference number: 5 (lower is better)
Translates to: EEETLPILCNQELDTIFSIASPL*ILVLKS
Trigger: TGACTTGAGGACTAGAATCAAGAGCGGCGAGGCTAT...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAAGAGTTGGTTGTCTCTaGGATTATAATCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: RLYQLILACGPRNSLAVLRVGCL*DYNPLQ
Trigger: CTGCAGTGGATTATAATCCAAGAGACAACCAACTCT...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGTGGATATTGTGGTTTaGAACAGCTCAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: RLYQLILACGPRNSLAVLVDIVV*NSSAEE
Trigger: TTCTTCAGCTGAGCTGTTCAAAACCACAATATCCAC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCAACCATCATCCCCCTTaGTGTCTGAGGCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLNHHPP*CLRPLY
Trigger: ATAAAGTGGCCTCAGACACAAAGGGGGATGATGGTT...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGATCAGCTCTCAGAAGGTaGTCTACCGTGTCCACAATT +
Preference number: 5 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGSALRR*STVSTI
Trigger: AATTGTGGACACGGTAGACAACCTTCTGAGAGCTGA...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTCAGCTCTCAGAAGGTaGTCTACCGTGTCCACAATT +
Preference number: 5 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLSALRR*STVSTI
Trigger: AATTGTGGACACGGTAGACAACCTTCTGAGAGCTGA...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATTGATACAAAGGTTCTaGTGGATAGTATTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: HWQRLYQLILACGPRNSLLIQRF*WIVLRS
Trigger: TGACCGCAATACTATCCACAAGAACCTTTGTATCAA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTGGTTTCAGAGTGTTaGAATGTTTCACCATTTTGC +
Preference number: 5 (lower is better)
Translates to: QRLYQLILACGPRNSLAVLVSEC*NVSPFC
Trigger: GCAAAATGGTGAAACATTCAAACACTCTGAAACCAG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS TCA 90 bp TCTACTCGGTTTGGAAGTTTGTATGTTGTTGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCATATTCTATTAACGTATCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: STRFGSLYVVVWRLF*KSSKEAYSINVSVR
Trigger: CCGCACCGATACGTTAATAGAATATGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGACAACAACATACAAACTTCCAAACCGAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGTCGATTGTTGCACCTTaGAGTCATGATTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQSIVAP*SHDFEG
Trigger: GCCTTCAAAATCATGACTCAAAGGTGCAACAATCGA...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAAACCATCATCCCCCTTaGTGTCTGAGGCCACTTTAT +
Preference number: 5 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKNHHPP*CLRPLY
Trigger: ATAAAGTGGCCTCAGACACAAAGGGGGATGATGGTT...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAGTTGGTTCCAAAAGGTaGTCTGCTAGGACGAATGCT +
Preference number: 5 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKVGSKR*SARTNA
Trigger: AGCATTCGTCCTAGCAGACAACCTTTTGGAACCAAC...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTGATACAAAGGTTCTaGTGGATAGTATTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: RLYQLILACGPRNSLAVLLIQRF*WIVLRS
Trigger: TGACCGCAATACTATCCACAAGAACCTTTGTATCAA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAATTGATACAAAGGTTCTaGTGGATAGTATTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKLIQRF*WIVLRS
Trigger: TGACCGCAATACTATCCACAAGAACCTTTGTATCAA...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCCAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATCGATTGTTGCACCTTaGAGTCATGATTTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYISIVAP*SHDFEG
Trigger: GCCTTCAAAATCATGACTCAAAGGTGCAACAATCGA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTTTCTGGTTCTTTCCTaGTTAAAGAAGACGGCTCCA +
Preference number: 5 (lower is better)
Translates to: ETLPILCNQELDTIFSPNFLVLS*LKKTAP
Trigger: TGGAGCCGTCTTCTTTAACAAGGAAAGAACCAGAAA...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAGTGGATATTGTGGTTTaGAACAGCTCAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIVDIVV*NSSAEE
Trigger: TTCTTCAGCTGAGCTGTTCAAAACCACAATATCCAC...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTTTCTTGTGGATAGTATaGCGGTCACTTTGTAGCCCT +
Preference number: 5 (lower is better)
Translates to: EEETLPILCNQELDTIFSFLWIV*RSLCSP
Trigger: AGGGCTACAAAGTGACCGCAATACTATCCACAAGAA...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGTTGATACAAAGGTTCTaGTGGATAGTATTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQLIQRF*WIVLRS
Trigger: TGACCGCAATACTATCCACAAGAACCTTTGTATCAA...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAACCAAGTACCCAAGACTaGATAAATGGCTTATTATCT +
Preference number: 5 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKPSTQD*INGLLS
Trigger: AGATAATAAGCCATTTATCAAGTCTTGGGTACTTGG...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
CDS-3UTR CAA 90 bp AAATCTATTCTTCTCACTGCAAAGGATAAGCAGGCCAACTTATACTTATGCTTGCAGTGTCTGAAGCACTaGCCATACTCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: KSILLTAKDKQANLYLCLQCLKH*PYSFRT
Trigger: AGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTG...CAAGCATAAGTATAAGTTGGCCTGCTTATCCTTTGCAGTGAGAAGAATAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
CDS-3UTR CAA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTGTGGATATTGTGGTTTaGAACAGCTCAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: EEETLPILCNQELDTIFSVDIVV*NSSAEE
Trigger: TTCTTCAGCTGAGCTGTTCAAAACCACAATATCCAC...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CAA 90 bp CAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCACCAAGTACCCAAGACTaGATAAATGGCTTATTATCT +
Preference number: 5 (lower is better)
Translates to: QNLSPAFPSLVRKSKIQSPSTQD*INGLLS
Trigger: AGATAATAAGCCATTTATCAAGTCTTGGGTACTTGG...TGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
CDS GCA 72 bp GCACTGGTGCGGGTGGTGGATGCCTTCACAGAGCTGTaGGGGCTCTCGGTCGGGAGGCCGCCACAGCAGTAC +
Preference number: 6 (lower is better)
Translates to: ALVRVVDAFTEL*GLSVGRPPQQY
Trigger: GTACTGCTGTGGCGGCCTCCCGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS GCA 72 bp TTGTCCCTCTGCTTCCGTCCTGAGGACCAGCTGCAGTaGTGCTCACGGGGCCTCGCTGGGAGGCACTGCTCG +
Preference number: 6 (lower is better)
Translates to: LSLCFRPEDQLQ*CSRGLAGRHCS
Trigger: CGAGCAGTGCCTCCCAGCGAGGCCCCGTGAGCAGCACTGCAGCTGGTCCTCAGGACGGAAGCAGAGGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS GCA 72 bp GCCAGAGGAGTACCGAGCACTGGTGCGGGTGGTGGATaGCTTCACAGAGCTGTGCGGGCTCTCGGTCGGGAG +
Preference number: 6 (lower is better)
Translates to: ARGVPSTGAGGG*LHRAVRALGRE
Trigger: CTCCCGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS GCA 72 bp GCCAGAGGAGTACCGAGCACTGGTGCGGGTGGTGGATaGCTTCACAGAGCTGTGCGGGCTCTCGGTCGGGNN +
Preference number: 6 (lower is better)
Translates to: ARGVPSTGAGGG*LHRAVRALGRX
Trigger: NNCCCGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200216.5
CDS CCA 72 bp GTGTGCCAGAGGAGTACCGAGCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGTGCGGGCTCTCGGTCG +
Preference number: 6 (lower is better)
Translates to: VCQRSTEHWCGW*MPSQSCAGSRS
Trigger: CGACCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS CCA 72 bp CCTGTGTGCCAGAGGAGTACCGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGCTGTGCGGGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: PVCQRSTEHWCG*WMPSQSCAGSR
Trigger: CCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200154.5
CDS GCA 72 bp TACGGCTCTGTGTGCCAGAGGAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCACAGAGCTGTGCGGGC +
Preference number: 6 (lower is better)
Translates to: YGSVCQRSTEHW*GWWMPSQSCAG
Trigger: GCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGAGCCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200216.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS CCA 72 bp TCTGTGTGCCAGAGGAGTACCGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGCTGTGCGGGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: SVCQRSTEHWCG*WMPSQSCAGSR
Trigger: CCGAGAGCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200216.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS GCA 72 bp GAATGTCCTGTGTGCCAGAGGAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCACAGAGCTGTGCGGGC +
Preference number: 6 (lower is better)
Translates to: ECPVCQRSTEHW*GWWMPSQSCAG
Trigger: GCCCGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGGACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200154.5
CDS GCA 72 bp CAGGGCCCTTCGGGTTCCATGTTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCCCTCTTGTTCCCTTGG +
Preference number: 6 (lower is better)
Translates to: QGPSGSMFPWKP*TDTRPSLLFPW
Trigger: CCAAGGGAACAAGAGGGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAACATGGAACCCGAAGGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 72 bp TTATACGGCTCTGTGTGCCAGAGGAGTACCGAGCACTaGTGCGGGTGGTGGATGCCTTCACAGAGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: LYGSVCQRSTEH*CGWWMPSQSCA
Trigger: CGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGAGCCGTATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200216.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS CCA 72 bp AGTGAATGTCCTGTGTGCCAGAGGAGTACCGAGCACTaGTGCGGGTGGTGGATGCCTTCACAGAGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: SECPVCQRSTEH*CGWWMPSQSCA
Trigger: CGCACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTCGGTACTCCTCTGGCACACAGGACATTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200154.5
CDS CAA 72 bp CCGTGGAAGCCATGCACAGATACGAGGCCGTCCCTCTaGTTCCCTTGGGACAGGGTCGCTCAACCATCATCC +
Preference number: 6 (lower is better)
Translates to: PWKPCTDTRPSL*FPWDRVAQPSS
Trigger: GGATGATGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGACGGCCTCGTATCTGTGCATGGCTTCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 90 bp TCCATGTTCCCGTGGAAGCCATGCACAGATACGAGGCCGTCCCTCTaGTTCCCTTGGGACAGGGTCGCTCAACCATCATCCCCCTTTGTG +
Preference number: 6 (lower is better)
Translates to: SMFPWKPCTDTRPSL*FPWDRVAQPSSPFV
Trigger: CACAAAGGGGGATGATGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAACATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 72 bp CCATGCACAGATACGAGGCCGTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCATCATCCCCCTTTGTG +
Preference number: 6 (lower is better)
Translates to: PCTDTRPSLLFP*DRVAQPSSPFV
Trigger: CACAAAGGGGGATGATGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGACGGCCTCGTATCTGTGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 72 bp AGCAAGCCTGGACTGTCCCGTAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCACTGTGGCCGGGAACA +
Preference number: 6 (lower is better)
Translates to: SKPGLSRNSCSQ*LLRRRPLWPGT
Trigger: TGTTCCCGGCCACAGTGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTTACGGGACAGTCCAGGCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 72 bp GCCATGCACAGATACGAGGCCGTCCCTCTTGTTCCCTaGGGACAGGGTCGCTCAACCATCATCCCCCTTTGT +
Preference number: 6 (lower is better)
Translates to: AMHRYEAVPLVP*GQGRSTIIPLC
Trigger: ACAAAGGGGGATGATGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGACGGCCTCGTATCTGTGCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS TCA 72 bp CGGGAGAGTTCACCGCAATGGTGCTGTTCCGACCCATaGGGTCTGCACCCAGCTTTATGGTTGCGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: RESSPQWCCSDP*GLHPALWLRSQ
Trigger: CTGAGAACGCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGGAACAGCACCATTGCGGTGAACTCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS GCA 72 bp GAGCTCACGTCCCCTGCAAACACATGCCCCTTGGTGTaGTTAGCTAGTTCATTGGCCAGGCTCGCAGCATTC +
Preference number: 6 (lower is better)
Translates to: ELTSPANTCPLV*LASSLARLAAF
Trigger: GAATGCTGCGAGCCTGGCCAATGAACTAGCTAAGCACACCAAGGGGCATGTGTTTGCAGGGGACGTGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS GCA 72 bp AGCCTCACAGAGGAGCTCACGTCCCCTGCAAACACATaGCCCTTGGTGTGCTTAGCTAGTTCATTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SLTEELTSPANT*PLVCLASSLAR
Trigger: CCTGGCCAATGAACTAGCTAAGCACACCAAGGGGCATGTGTTTGCAGGGGACGTGAGCTCCTCTGTGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 90 bp ACGGGGCCTCGCTGGGAGGCACTGCTCGTGGTGGATATTGTGGTTTaGAACAGCTCAGCTGAAGAAGTTATTGTCACAGCTGTGGTAGGC +
Preference number: 6 (lower is better)
Translates to: TGPRWEALLVVDIVV*NSSAEEVIVTAVVG
Trigger: GCCTACCACAGCTGTGACAATAACTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCACCACGAGCAGTGCCTCCCAGCGAGGCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS TCA 72 bp CTCTCTGTAGGTTGCTGGCGAGTTAAACGCAGGAGCTaGAGGGGCATTGCATACAACTGTTTCAGCGAGCAG +
Preference number: 6 (lower is better)
Translates to: LSVGCWRVKRRS*RGIAYNCFSEQ
Trigger: CTGCTCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTCCTGCGTTTAACTCGCCAGCAACCTACAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000198139.5
ENSMUST00000200456.2
CDS CAA 72 bp GCAAACACATGCCCCTTGGTGTGCTTAGCTAGTTCATaGGCCAGGCTCGCAGCATTCTCTCCACTTCTGATC +
Preference number: 6 (lower is better)
Translates to: ANTCPLVCLASS*ARLAAFSPLLI
Trigger: GATCAGAAGTGGAGAGAATGCTGCGAGCCTGGCCAATGAACTAGCTAAGCACACCAAGGGGCATGTGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 90 bp TGGCTGCAAGCGCACGTTGTGCGAGTTTTATTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAATATCCCATCATGGTTCTCTCTGAG +
Preference number: 6 (lower is better)
Translates to: WLQAHVVRVLLVSTS*QPWVDQYPIMVLSE
Trigger: CTCAGAGAGAACCATGATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAATAAAACTCGCACAACGTGCGCTTGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 90 bp ATTCCAAAGCCTCAGCTCTCAGAAGGTTGTCTACCGTGTCCACAATaGCCTTGTTATAGCTCCTCCCAGCCGAATCCTTCTCACTCGGCT +
Preference number: 6 (lower is better)
Translates to: IPKPQLSEGCLPCPQ*PCYSSSQPNPSHSA
Trigger: AGCCGAGTGAGAAGGATTCGGCTGGGAGGAGCTATAACAAGGCAATTGTGGACACGGTAGACAACCTTCTGAGAGCTGAGGCTTTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS TCA 72 bp TCTCGGTCGGGAGGCCGCCACAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTTTTCGTACTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: SRSGGRHSSTSV*STCHTLFVLSF
Trigger: AAAAGAAAGTACGAAAAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCTGTGGCGGCCTCCCGACCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000197567.5
ENSMUST00000197925.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200456.2
ENSMUST00000200543.5
CDS GCA 72 bp CTCAGCTCTCAGAAGGTTGTCTACCGTGTCCACAATTaGCTTGTTATAGCTCCTCCCAGCCGAATCCTTCTC +
Preference number: 6 (lower is better)
Translates to: LSSQKVVYRVHN*LVIAPPSRILL
Trigger: GAGAAGGATTCGGCTGGGAGGAGCTATAACAAGGCAATTGTGGACACGGTAGACAACCTTCTGAGAGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 72 bp CGCCCCGGCTTAGTCGCGTGTTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGCTTTCATTGTCTTGGT +
Preference number: 6 (lower is better)
Translates to: RPGLVACCRCSQ*CSCLLRFHCLG
Trigger: ACCAAGACAATGAAAGCGAAGCAGGCAAGAACACCATTGACTACATCTACAACACGCGACTAAGCCGGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 72 bp CCTCAGCTCTCAGAAGGTTGTCTACCGTGTCCACAATaGCCTTGTTATAGCTCCTCCCAGCCGAATCCTTCT +
Preference number: 6 (lower is better)
Translates to: PQLSEGCLPCPQ*PCYSSSQPNPS
Trigger: AGAAGGATTCGGCTGGGAGGAGCTATAACAAGGCAATTGTGGACACGGTAGACAACCTTCTGAGAGCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 90 bp GTCCACAATTGCCTTAAGGTAAGCCCTGCATGTCTTCTCTCGTTTTaGGAGCTTGTTATAGCTCCTCCCAGCCGAATCCTTCTCACTCGG +
Preference number: 6 (lower is better)
Translates to: VHNCLKVSPACLLSF*ELVIAPPSRILLTR
Trigger: CCGAGTGAGAAGGATTCGGCTGGGAGGAGCTATAACAAGCTCCAAAAACGAGAGAAGACATGCAGGGCTTACCTTAAGGCAATTGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS TCA 72 bp GCTGGGAGGCACTGCTCGTGGTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAGTTATTGTCACAGCTG +
Preference number: 6 (lower is better)
Translates to: AGRHCSWWILWF*TAQLKKLLSQL
Trigger: CAGCTGTGACAATAACTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCACCACGAGCAGTGCCTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 72 bp GCGCACGTTGTGCGAGTTTTATTAGTGTCAACCAGCTaGCAGCCCTGGGTAGACCAATATCCCATCATGGTT +
Preference number: 6 (lower is better)
Translates to: AHVVRVLLVSTS*QPWVDQYPIMV
Trigger: AACCATGATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGTTGACACTAATAAAACTCGCACAACGTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 90 bp TGTCTGCTAGGACGAATGCTCCTTCTTCCAAGGTATCCAACAACATaGTGGCTGTGTGCGCCTGCTCTGAAGAATTCATGTGTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: CLLGRMLLLPRYPTT*WLCAPALKNSCVSR
Trigger: CCTGGAAACACATGAATTCTTCAGAGCAGGCGCACACAGCCACAATGTTGTTGGATACCTTGGAAGAAGGAGCATTCGTCCTAGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 72 bp TCCCTGTGGGCCATGAGAATAGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTGCGAGTTTTATTAGTG +
Preference number: 6 (lower is better)
Translates to: SLWAMRIAKLVR*LQAHVVRVLLV
Trigger: CACTAATAAAACTCGCACAACGTGCGCTTGCAGCCACCTAACCAATTTTGCTATTCTCATGGCCCACAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 72 bp TGCCTTAAGGTAAGCCCTGCATGTCTTCTCTCGTTTTaGGAGCTTGTTATAGCTCCTCCCAGCCGAATCCTT +
Preference number: 6 (lower is better)
Translates to: CLKVSPACLLSF*ELVIAPPSRIL
Trigger: AAGGATTCGGCTGGGAGGAGCTATAACAAGCTCCAAAAACGAGAGAAGACATGCAGGGCTTACCTTAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS CAA 72 bp GGACGAATGCTCCTTCTTCCAAGGTATCCAACAACATaGTGGCTGTGTGCGCCTGCTCTGAAGAATTCATGT +
Preference number: 6 (lower is better)
Translates to: GRMLLLPRYPTT*WLCAPALKNSC
Trigger: ACATGAATTCTTCAGAGCAGGCGCACACAGCCACAATGTTGTTGGATACCTTGGAAGAAGGAGCATTCGTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS GCA 72 bp CCTTCTTCCAAGGTATCCAACAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTCATGTGTTTCCAGGAT +
Preference number: 6 (lower is better)
Translates to: PSSKVSNNIVAV*ACSEEFMCFQD
Trigger: ATCCTGGAAACACATGAATTCTTCAGAGCAGGCGCACACAGCCACAATGTTGTTGGATACCTTGGAAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 72 bp CGAATGCTCCTTCTTCCAAGGTATCCAACAACATTGTaGCTGTGTGCGCCTGCTCTGAAGAATTCATGTGTT +
Preference number: 6 (lower is better)
Translates to: RMLLLPRYPTTL*LCAPALKNSCV
Trigger: AACACATGAATTCTTCAGAGCAGGCGCACACAGCCACAATGTTGTTGGATACCTTGGAAGAAGGAGCATTCG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 90 bp CTGTGGCCGGGAACAGGTACCCAGCGACATAGTAATATTTCTTCCTaGAATATTCGCTCTCGAAAACCTCAACCAACATTAGGTAGAGCT +
Preference number: 6 (lower is better)
Translates to: LWPGTGTQRHSNISS*NIRSRKPQPTLGRA
Trigger: AGCTCTACCTAATGTTGGTTGAGGTTTTCGAGAGCGAATATTCAAGGAAGAAATATTACTATGTCGCTGGGTACCTGTTCCCGGCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS TCA 72 bp GTTCTTGCCTGCTTCGCTTTCATTGTCTTGGTACACTaGCCTGACCACATAGAGAACCCCACATATCATGAA +
Preference number: 6 (lower is better)
Translates to: VLACFAFIVLVH*PDHIENPTYHE
Trigger: TTCATGATATGTGGGGTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGAAGCAGGCAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS GCA 72 bp TTAGTCGCGTGTTGTAGATGTAGTCAATGGTGTTCTTaGCTGCTTCGCTTTCATTGTCTTGGTACACTGACC +
Preference number: 6 (lower is better)
Translates to: LVACCRCSQWCS*LLRFHCLGTLT
Trigger: GGTCAGTGTACCAAGACAATGAAAGCGAAGCAGGCAAGAACACCATTGACTACATCTACAACACGCGACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS GCA 72 bp TCCAAGGTATCCAACAACATTGTGGCTGTGTGCGCCTaGTCTGAAGAATTCATGTGTTTCCAGGATTCCAAA +
Preference number: 6 (lower is better)
Translates to: SKVSNNIVAVCA*SEEFMCFQDSK
Trigger: TTTGGAATCCTGGAAACACATGAATTCTTCAGAGCAGGCGCACACAGCCACAATGTTGTTGGATACCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 72 bp GCAGTTTGCATTGAAATAATTGTCAGGATCAATGTGTaGCAGTGTGAAAAGCACGGGATCTGTCAGGTACAC +
Preference number: 6 (lower is better)
Translates to: AVCIEIIVRINV*QCEKHGICQVH
Trigger: GTGTACCTGACAGATCCCGTGCTTTTCACACTGCCACACATTGATCCTGACAATTATTTCAATGCAAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 72 bp CATCATACACCACAAATCCAGTACCGTCTACTCGGTTaGGAAGTTTGTATGTTGTTGTCTGGCGGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: HHTPQIQYRLLG*EVCMLLSGGCF
Trigger: AAAACAGCCGCCAGACAACAACATACAAACTTCCAAACCGAGTAGACGGTACTGGATTTGTGGTGTATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 72 bp CAGTACCGTCTACTCGGTTTGGAAGTTTGTATGTTGTaGTCTGGCGGCTGTTTTGAAAATCTTCTAAAGAGG +
Preference number: 6 (lower is better)
Translates to: QYRLLGLEVCML*SGGCFENLLKR
Trigger: CCTCTTTAGAAGATTTTCAAAACAGCCGCCAGACAACAACATACAAACTTCCAAACCGAGTAGACGGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS TCA 72 bp TTTGTAAGTTCCGGGACATGGATCAGGAAATACATCTaGCCCGGTAACTACTATACACTGTGTTCGATTGTT +
Preference number: 6 (lower is better)
Translates to: FVSSGTWIRKYI*PGNYYTLCSIV
Trigger: AACAATCGAACACAGTGTATAGTAGTTACCGGGTCAGATGTATTTCCTGATCCATGTCCCGGAACTTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 72 bp ATCCAGTACCGTCTACTCGGTTTGGAAGTTTGTATGTaGTTGTCTGGCGGCTGTTTTGAAAATCTTCTAAAG +
Preference number: 6 (lower is better)
Translates to: IQYRLLGLEVCM*LSGGCFENLLK
Trigger: CTTTAGAAGATTTTCAAAACAGCCGCCAGACAACAACATACAAACTTCCAAACCGAGTAGACGGTACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 90 bp CCACAAATCCAGTACCGTCTACTCGGTTTGGAAGTTTGTATGTTGTaGTCTGGCGGCTGTTTTGAAAATCTTCTAAAGAGGCATATTCTA +
Preference number: 6 (lower is better)
Translates to: PQIQYRLLGLEVCML*SGGCFENLLKRHIL
Trigger: TAGAATATGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGACAACAACATACAAACTTCCAAACCGAGTAGACGGTACTGGATTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 90 bp ACACCACAAATCCAGTACCGTCTACTCGGTTTGGAAGTTTGTATGTaGTTGTCTGGCGGCTGTTTTGAAAATCTTCTAAAGAGGCATATT +
Preference number: 6 (lower is better)
Translates to: TPQIQYRLLGLEVCM*LSGGCFENLLKRHI
Trigger: AATATGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGACAACAACATACAAACTTCCAAACCGAGTAGACGGTACTGGATTTGTGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CAA 72 bp ATAAATTCAGCAATGAAAAGGTTGATACAAAGGTTCTaGTGGATAGTATTGCGGTCACTTTGTAGCCCTCGG +
Preference number: 6 (lower is better)
Translates to: INSAMKRLIQRF*WIVLRSLCSPR
Trigger: CCGAGGGCTACAAAGTGACCGCAATACTATCCACAAGAACCTTTGTATCAACCTTTTCATTGCTGAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS CCA 72 bp GAAGTTATTGTTCCATACGTAGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGCAATATACTGGTACTG +
Preference number: 6 (lower is better)
Translates to: EVIVPYVELVVS*IIIHCSNILVL
Trigger: CAGTACCAGTATATTGCTGCAGTGGATTATAATCCAAGAGACAACCAACTCTACGTATGGAACAATAACTTC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS TCA 72 bp TTTGGAAGTTTGTATGTTGTTGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCATATTCTATTAACGTA +
Preference number: 6 (lower is better)
Translates to: FGSLYVVVWRLF*KSSKEAYSINV
Trigger: TACGTTAATAGAATATGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGACAACAACATACAAACTTCCAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5