RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRL2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028184

Ensembl transcript IDs: ENSMUST00000106128.7, ENSMUST00000168352.2, ENSMUST00000195988.5, ENSMUST00000196526.5, ENSMUST00000197348.5, ENSMUST00000197567.5, ENSMUST00000197925.5, ENSMUST00000198139.5, ENSMUST00000198779.5, ENSMUST00000199059.5, ENSMUST00000199238.5, ENSMUST00000199750.5, ENSMUST00000200154.5, ENSMUST00000200216.5, ENSMUST00000200456.2, ENSMUST00000200543.5

Found 1285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTCACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTaGTCTCCGGGTAGGGAGAGTCTCTTAGGTTGGGCATGCTCGTGT +
Preference number: 1 (lower is better)
Translates to: SHSSWRETGPLPCLG*SPGRESLLGWACSC
Trigger: ACACGAGCATGCCCAACCTAAGAGACTCTCCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR TCA 90 bp TTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATGCATCAAAGATaGGGCGTCAGCCACAATCGCGTCATCTTCACTGCTGCTGCCGCC +
Preference number: 1 (lower is better)
Translates to: FVAELQPWVVTMHQR*GVSHNRVIFTAAAA
Trigger: GGCGGCAGCAGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR GCA 90 bp CCATGGGCCAACAGAGCCGAGTCTTCTGGCCGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATG +
Preference number: 1 (lower is better)
Translates to: PWANRAESSGRVGGS*RAPLAASLSINTCM
Trigger: CATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACTCGGCTCTGTTGGCCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR GCA 90 bp GCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCAGCCACAATCGCGTCATCTTCACTG +
Preference number: 1 (lower is better)
Translates to: ASSSLWRNSSPGLSP*IKDEASATIASSSL
Trigger: CAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 90 bp AATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAGAGCCGAGTCTTCTGGCCGAGTTGG +
Preference number: 1 (lower is better)
Translates to: NSQDCEVQSDPFYYK*RTMGQQSRVFWPSW
Trigger: CCAACTCGGCCAGAAGACTCGGCTCTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR TCA 90 bp CGCCGTCTACAGTGGGAAATCAACAACGATGGGCAGAGGTCACCATaGTGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAG +
Preference number: 1 (lower is better)
Translates to: RRLQWEINNDGQRSP*WVEEETLPILCNQE
Trigger: CTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGTTGATTTCCCACTGTAGACGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 90 bp TACAGTGGGAAATCAACAACGATGGGCAGAGGTCACCATGATGGGTaGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACA +
Preference number: 1 (lower is better)
Translates to: YSGKSTTMGRGHHDG*KKKLCLFCATKSST
Trigger: TGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGTTGATTTCCCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 90 bp AGGGTTCCTAAGCAGAGGGGGAGATGGGATTGGAAAGGACCACCTTaGTCGAGTCTATTGCTTAACATACATAAAAGTGCACGTTACTAC +
Preference number: 1 (lower is better)
Translates to: RVPKQRGRWDWKGPP*SSLLLNIHKSARYY
Trigger: GTAGTAACGTGCACTTTTATGTATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCTCTGCTTAGGAACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR TCA 90 bp CTTATACTTATGCTTGCATTCTTATACGTAACTATGGTTACAGTCTaGGGGTTCCTAAGCAGAGGGGGAGATGGGATTGGAAAGGACCAC +
Preference number: 1 (lower is better)
Translates to: LILMLAFLYVTMVTV*GFLSRGGDGIGKDH
Trigger: GTGGTCCTTTCCAATCCCATCTCCCCCTCTGCTTAGGAACCCTCAGACTGTAACCATAGTTACGTATAAGAATGCAAGCATAAGTATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR GCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTaGCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAA +
Preference number: 1 (lower is better)
Translates to: TTMGRGHHDGWKKKL*LFCATKSSTQYFLQ
Trigger: TTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 90 bp ACTCTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCTACAGTGGGAAATCAACAACGATGG +
Preference number: 1 (lower is better)
Translates to: TLLAIRNLNVRKGTK*PQQTPSTVGNQQRW
Trigger: CCATCGTTGTTGATTTCCCACTGTAGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR GCA 90 bp TTCTTCTCACTGCAAAGGATAAGCAGGCCAACTTATACTTATGCTTaGATTCTTATACGTAACTATGGTTACAGTCTGAGGGTTCCTAAG +
Preference number: 1 (lower is better)
Translates to: FFSLQRISRPTYTYA*ILIRNYGYSLRVPK
Trigger: CTTAGGAACCCTCAGACTGTAACCATAGTTACGTATAAGAATGCAAGCATAAGTATAAGTTGGCCTGCTTATCCTTTGCAGTGAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR TCA 90 bp CTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTaGAGCCTACGTCTTGTATATAATACAATGCAGGCCTACAGAAAA +
Preference number: 1 (lower is better)
Translates to: LVRKSKIQSICPTGS*SLRLVYNTMQAYRK
Trigger: TTTTCTGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTCGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVRVGGS*RAPLAA
Trigger: CGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCG...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CAA 90 bp CAAGTGGAGAACCATGGGCCAACAGAGCCGAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: QVENHGPTEPSLLAE*EGAAGPHWQRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACTCGGCTCTGTTGGCCCATGGTTCTCCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CAA 90 bp ATGAGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGATGAGGCGTCAGCCACAATCGCGTCA +
Preference number: 2 (lower is better)
Translates to: MSGASSSLWRNSSPG*SPCIKDEASATIAS
Trigger: TGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAGTGAGAAGTGCCCGGTaGCCCCTTCGCCCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGVRSAR*PLRPLF
Trigger: GAACAGAGGGCGAAGGGGTCACCGGGCACTTCTCAC...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CAA 90 bp CTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTaGTGGGTTTTGTTGCCGCCCCGGAGGTTGTTGTGCACTAACTCT +
Preference number: 2 (lower is better)
Translates to: LLPPITGLTGSLSSK*WVLLPPRRLLCTNS
Trigger: AGAGTTAGTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CAA 90 bp TCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTaGAGCTCCAAGTTGTGGGTTTTGTTGCCGCCCCGGAGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: SSSLLLPPITGLTGS*SSKLWVLLPPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp GAGCTTGAGCTCCAAGTTGTGGGTTTTGTTGCCGCCCCGGAGGTTGTTGTGCACGCTGCAGGGCCCCACTaGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: ELELQVVGFVAAPEVVVHAAGPH*QRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC...GTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTCGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCRVGGS*RAPLAA
Trigger: CGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCG...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 2 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGCTGCAGGGCCCCACTaGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQAAGPH*QRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCGCTGCAGGGCCCCACTaGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: AARNMAGREGLLFVLQSLAAGPH*QRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAAGGGGGAGATGGGATTaGAAAGGACCACCTTGGTCG +
Preference number: 2 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGRGRWD*KGPPWS
Trigger: CGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR-3UTR CCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 2 (lower is better)
Translates to: AARNMAGREGLLFVLQSLLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATCGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYRVGGS*RAPLAA
Trigger: CGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCG...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTGGGCAGAGGTCACCATaGTGGGTGGAAGAAGAAACT +
Preference number: 2 (lower is better)
Translates to: TAARNMAGREGLLFVLQSGQRSP*WVEEET
Trigger: AGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCC...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAACTATGGTTACAGTCTaGGGGTTCCTAAGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGTMVTV*GFLSRG
Trigger: CCCTCTGCTTAGGAACCCTCAGACTGTAACCATAGT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR-3UTR TCA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCCGGGCATTGTTCAGTaGATGTCATTATGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRPGIVQ*MSLCLS
Trigger: AGACAGACATAATGACATTCACTGAACAATGCCCGG...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200456.2
3UTR-3UTR GCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 2 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCT +
Preference number: 2 (lower is better)
Translates to: KEHGREGGSLVCFTISLHRKGTK*PQQTPS
Trigger: AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCT...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCT +
Preference number: 2 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLRKGTK*PQQTPS
Trigger: AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCT +
Preference number: 2 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTRKGTK*PQQTPS
Trigger: AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCT...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCATAAGGCCTGTGGCTTaGTTGCTACTGGTTCGACAT +
Preference number: 2 (lower is better)
Translates to: AARNMAGREGLLFVLQSLIRPVA*LLLVRH
Trigger: ATGTCGAACCAGTAGCAATCAAGCCACAGGCCTTAT...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAAGTGAGAAGTGCCCGGTaGCCCCTTCGCCCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKVRSAR*PLRPLF
Trigger: GAACAGAGGGCGAAGGGGTCACCGGGCACTTCTCAC...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp ATAAAAATTCACAGGACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTGGACGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: IKIHRTVRFSLIRFTTSGRVGGS*RAPLAA
Trigger: CGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCG...TCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTCCTGTGAATTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 2 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCATCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 2 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTCGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCACAGTTGAGAAGACATaGAATAAGGCCTGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: AARNMAGREGLLFVLQSLTVEKT*NKACGL
Trigger: CAAGCCACAGGCCTTATTTCATGTCTTCTCAACTGT...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAATGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 2 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCG +
Preference number: 2 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKRVGGS*RAPLAA
Trigger: CGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCG...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTATTTCCCCACATTTGTaGAAGGCATGGCAGGACTTC +
Preference number: 2 (lower is better)
Translates to: TAARNMAGREGLLFVLQSISPHL*KAWQDF
Trigger: GAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAAT...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAGCTGCAGGGCCCCACTaGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPAAGPH*QRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: TAARNMAGREGLLFVLQSPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTAGGGGGAGATGGGATTaGAAAGGACCACCTTGGTCG +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFRGRWD*KGPPWS
Trigger: CGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR CAA 90 bp CACCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAAATACCT +
Preference number: 2 (lower is better)
Translates to: HQLPQGTWPGGRVSC*FYNLSTQQQKRKIP
Trigger: AGGTATTTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 2 (lower is better)
Translates to: PTAARNMAGREGLLFVLQALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 2 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 2 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGGAAGTGCAAACGGGTaGAGAATCTCTCTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKGSANG*RISLLL
Trigger: AAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAGGAAGTGCAAACGGGTaGAGAATCTCTCTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTGSANG*RISLLL
Trigger: AAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCC...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACACGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 2 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYISLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp GGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGAAACGTAAACGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: GRVSCLFYNLSTQQQKRKRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...TTTACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTGTGAGAAGTGCCCGGTaGCCCCTTCGCCCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: LPILCNQELDTIFSPNSFVRSAR*PLRPLF
Trigger: GAACAGAGGGCGAAGGGGTCACCGGGCACTTCTCAC...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAATTTCCCCACATTTGTaGAAGGCATGGCAGGACTTC +
Preference number: 2 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTISPHL*KAWQDF
Trigger: GAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAAT...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATGCTGCAGGGCCCCACTaGCAGCGTCTCTATCAATTA +
Preference number: 2 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYAAGPH*QRLYQL
Trigger: TAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: LCSRINRGVTQDLQISPHPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: KEHGREGGSLVCFTISLHPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTTGTCCCACAGGATCTTaGAGCCTACGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLCPTGS*SLRLVY
Trigger: ATATACAAGACGTAGGCTTCAAGATCCTGTGGGACA...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACTGTCCCACAGGATCTTaGAGCCTACGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: KEHGREGGSLVCFTISLHCPTGS*SLRLVY
Trigger: ATATACAAGACGTAGGCTTCAAGATCCTGTGGGACA...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTATAAGGCCTGTGGCTTaGTTGCTACTGGTTCGACAT +
Preference number: 2 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFIRPVA*LLLVRH
Trigger: ATGTCGAACCAGTAGCAATCAAGCCACAGGCCTTAT...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAACAGTTGAGAAGACATaGAATAAGGCCTGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: NMAGREGLLFVLQSLYTATVEKT*NKACGL
Trigger: CAAGCCACAGGCCTTATTTCATGTCTTCTCAACTGT...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTACAGTTGAGAAGACATaGAATAAGGCCTGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLTVEKT*NKACGL
Trigger: CAAGCCACAGGCCTTATTTCATGTCTTCTCAACTGT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTATTTCCCCACATTTGTaGAAGGCATGGCAGGACTTC +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFISPHL*KAWQDF
Trigger: GAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAAT...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGGTCACCATGATGGGTaGAAGAAGAAACTTTGCCTA +
Preference number: 2 (lower is better)
Translates to: LCSRINRGVTQDLQISPHGHHDG*KKKLCL
Trigger: TAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCT +
Preference number: 2 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLRKGTK*PQQTPS
Trigger: AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCT...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAATGTCCCACAGGATCTTaGAGCCTACGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQCPTGS*SLRLVY
Trigger: ATATACAAGACGTAGGCTTCAAGATCCTGTGGGACA...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTCCCACAGGATCTTaGAGCCTACGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFCPTGS*SLRLVY
Trigger: ATATACAAGACGTAGGCTTCAAGATCCTGTGGGACA...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGGGCAGAGGTCACCATaGTGGGTGGAAGAAGAAACT +
Preference number: 2 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYGQRSP*WVEEET
Trigger: AGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCC...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAATCACTAGAAAGTCTGTaGGAAGTGCCCGGTGACCCC +
Preference number: 2 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLESLESL*EVPGDP
Trigger: GGGGTCACCGGGCACTTCTCACAGACTTTCTAGTGA...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 2 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 2 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp ATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTAAAGACTTGTCACGGAAGTGCAAACGGGTaGAGAATCTCTCTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: ILACGPRNSLAVLLKTCHGSANG*RISLLL
Trigger: AAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCC...GTGACAAGTCTTTAATAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCATGGCTTGATTGCTACTaGTTCGACATGGTTTCAGTT +
Preference number: 2 (lower is better)
Translates to: NMAGREGLLFVLQSLYTAWLDCY*FDMVSV
Trigger: AACTGAAACCATGTCGAACCAGTAGCAATCAAGCCA...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCT +
Preference number: 2 (lower is better)
Translates to: LPILCNQELDTIFSPNSFRKGTK*PQQTPS
Trigger: AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCT...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp CAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATTAAAGACTACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 2 (lower is better)
Translates to: QLILACGPRNSLAVLLKTTESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...AGTCTTTAATAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAA +
Preference number: 2 (lower is better)
Translates to: LCSRINRGVTQDLQISPHGQLQG*AYFYSK
Trigger: TTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CAA 90 bp GGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTaGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTT +
Preference number: 2 (lower is better)
Translates to: GSANGCRISLLLFQV*SGKVRYSQFVPQDL
Trigger: AAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACGGGCAGAGGTCACCATaGTGGGTGGAAGAAGAAACT +
Preference number: 2 (lower is better)
Translates to: ETLPILCNQELDTIFSPNGQRSP*WVEEET
Trigger: AGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCC...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 2 (lower is better)
Translates to: LPILCNQELDTIFSPNSFRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 2 (lower is better)
Translates to: EEETLPILCNQELDTIFSRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...AGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 2 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR TCA 90 bp AGGGGGAGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATTGCTTAACATAAGAGCAGAGCTTTGCTaGAACAATTTACATGTCATT +
Preference number: 2 (lower is better)
Translates to: RGRWDWKGPPWSSLLLNIRAELC*NNLHVI
Trigger: AATGACATGTAAATTGTTTCAGCAAAGCTCTGCTCT...TATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR-3UTR TCA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAATTTACACAAAGAGCTTaGAAGAAGAGCAGAGCTTTG +
Preference number: 2 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQFTQRA*KKSRAL
Trigger: CAAAGCTCTGCTCTTCTTTCAAGCTCTTTGTGTAAA...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000198139.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACTGGAAGAAGAAACTTTaGCTATTTTGTGCAACCAAG +
Preference number: 2 (lower is better)
Translates to: KEHGREGGSLVCFTISLHWKKKL*LFCATK
Trigger: CTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCA...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 2 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTCATGGTTTCAGTTGTTaGCGTAATGTAAAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFHGFSC*RNVKGL
Trigger: CAAACCTTTTACATTACGGCAACAACTGAAACCATG...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATACCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp GAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: ETLPILCNQELDTIFSPNPFYYK*RTMGQQ
Trigger: CTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGG...GTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAATGTCCCACAGGATCTTaGAGCCTACGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKCPTGS*SLRLVY
Trigger: ATATACAAGACGTAGGCTTCAAGATCCTGTGGGACA...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR TCA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 2 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLEALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR GCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATCATGGTTTCAGTTGTTaGCGTAATGTAAAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYHGFSC*RNVKGL
Trigger: CAAACCTTTTACATTACGGCAACAACTGAAACCATG...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATGGCTTGATTGCTACTaGTTCGACATGGTTTCAGTT +
Preference number: 2 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIWLDCY*FDMVSV
Trigger: AACTGAAACCATGTCGAACCAGTAGCAATCAAGCCA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTCATGGTTTCAGTTGTTaGCGTAATGTAAAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSHGFSC*RNVKGL
Trigger: CAAACCTTTTACATTACGGCAACAACTGAAACCATG...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATATGGAAGAAGAAACTTTaGCTATTTTGTGCAACCAAG +
Preference number: 2 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIWKKKL*LFCATK
Trigger: CTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCA...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR GCA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTTGGAAGAAGAAACTTTaGCTATTTTGTGCAACCAAG +
Preference number: 2 (lower is better)
Translates to: LPILCNQELDTIFSPNSFWKKKL*LFCATK
Trigger: CTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCA...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: HSSWRETGPLPCLGCSPGSLLAE*EGAAGP
Trigger: GGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACT...ACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 72 bp ACCATGGGCCAACAGAGCCGAGTCTTCTGGCCGAGTTaGAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCT +
Preference number: 3 (lower is better)
Translates to: TMGQQSRVFWPS*RELQGPTGSVS
Trigger: AGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACTCGGCTCTGTTGGCCCATGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 72 bp GTCCGCTGGGGGATGAGCGGCGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGGTTGTCACCATGCATC +
Preference number: 3 (lower is better)
Translates to: VRWGMSGASSSL*RNSSPGLSPCI
Trigger: GATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCATCCCCCAGCGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR TCA 72 bp GGGGTTGGTACAGAAGCGAGTGAGTCCGCTGGGGGATaGGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCA +
Preference number: 3 (lower is better)
Translates to: GVGTEASESAGG*AAPPALCGGTP
Trigger: TGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 72 bp CTGGGCTGCTCTCCGGGTAGGGAGAGTCTCTTAGGTTaGGCATGCTCGTGTACAGAGAGTCTCTGTTGGGGG +
Preference number: 3 (lower is better)
Translates to: LGCSPGRESLLG*ACSCTESLCWG
Trigger: CCCCCAACAGAGACTCTCTGTACACGAGCATGCCCAACCTAAGAGACTCTCCCTACCCGGAGAGCAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQSLLAE*EGAAGP
Trigger: GGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACT...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATACTTGTGTCCCGGGCATaGTTCAGTGAATGTCCTCTA +
Preference number: 3 (lower is better)
Translates to: STVHDLHAVVVVRLAQGILVSRA*FSECPL
Trigger: TAGAGGACATTCACTGAACAATGCCCGGGACACAAG...TATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197348.5
3UTR GCA 72 bp AACAGAGCCGAGTCTTCTGGCCGAGTTGGAGGGAGCTaGAGGGCCCCACTGGCAGCGTCTCTATCAATTAAT +
Preference number: 3 (lower is better)
Translates to: NRAESSGRVGGS*RAPLAASLSIN
Trigger: ATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACTCGGCTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCACTTGTGTCCCGGGCATaGTTCAGTGAATGTCATTAT +
Preference number: 3 (lower is better)
Translates to: DLVHSPRPARRRGSPPCALVSRA*FSECHY
Trigger: ATAATGACATTCACTGAACAATGCCCGGGACACAAG...TGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200456.2
3UTR GCA 72 bp TCTTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCAGCCACAATCGCGTCA +
Preference number: 3 (lower is better)
Translates to: SLWRNSSPGLSP*IKDEASATIAS
Trigger: TGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 72 bp ATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGGAGGTTGTTGTGCACT +
Preference number: 3 (lower is better)
Translates to: ITGLTGSLSSKL*VLLPPRRLLCT
Trigger: AGTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR TCA 72 bp GAACTCCAGCCCTGGGTTGTCACCATGCATCAAAGATaGGGCGTCAGCCACAATCGCGTCATCTTCACTGCT +
Preference number: 3 (lower is better)
Translates to: ELQPWVVTMHQR*GVSHNRVIFTA
Trigger: AGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSSLLAE*EGAAGP
Trigger: GGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACT...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCAGATTTCCCCACATTaGTGCAAGGCATGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: TAARNMAGREGLLFVLQSQISPH*CKAWQD
Trigger: GTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTG...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 3 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYSLLAE*EGAAGP
Trigger: GGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACT...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 72 bp GACTGTGAGGTTCAGTCTGATCCGTTTTACTACAAGTaGAGAACCATGGGCCAACAGAGCCGAGTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: DCEVQSDPFYYK*RTMGQQSRVFW
Trigger: CCAGAAGACTCGGCTCTGTTGGCCCATGGTTCTCCACTTGTAGTAAAACGGATCAGACTGAACCTCACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 72 bp AGTCTGAGGGTTCCTAAGCAGAGGGGGAGATGGGATTaGAAAGGACCACCTTGGTCGAGTCTATTGCTTAAC +
Preference number: 3 (lower is better)
Translates to: SLRVPKQRGRWD*KGPPWSSLLLN
Trigger: GTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCTCTGCTTAGGAACCCTCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR CCA 72 bp TACTTTTATAGTAAATGTCCTCGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: YFYSKCPRSHSS*RETGPLPCLGC
Trigger: GCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACGAGGACATTTACTATAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 3 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR TCA 72 bp CTTTTGTTCACTAGAAAGTCTGTGAGAAGTGCCCGGTaGCCCCTTCGCCCTCTGTTCCAGAATAAACAGAGG +
Preference number: 3 (lower is better)
Translates to: LLFTRKSVRSAR*PLRPLFQNKQR
Trigger: CCTCTGTTTATTCTGGAACAGAGGGCGAAGGGGTCACCGGGCACTTCTCACAGACTTTCTAGTGAACAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 72 bp GGTAGCACATGTGGAGATGGCGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAATGTCCTCGTTCTCAC +
Preference number: 3 (lower is better)
Translates to: GSTCGDGGQLQG*AYFYSKCPRSH
Trigger: GTGAGAACGAGGACATTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCCGCCATCTCCACATGTGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp AAATCTATTCTTCTCACTGCAAAGGATAAGCAGGCCAACTTATACTTATGCTTGAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: KSILLTAKDKQANLYLCLSLLAE*EGAAGP
Trigger: GGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACT...CAAGCATAAGTATAAGTTGGCCTGCTTATCCTTTGCAGTGAGAAGAATAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR-3UTR CAA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTTTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 3 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 72 bp TTTACAGACTCAGTTCACCAACTGCCGCAAGGAACATaGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAT +
Preference number: 3 (lower is better)
Translates to: FTDSVHQLPQGT*PGGRVSCLFYN
Trigger: ATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGGTGAACTGAGTCTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGGGAGGGAGGGTCTCTaGTTTGTTTTACAATCTCTC +
Preference number: 3 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKGREGL*FVLQSL
Trigger: GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCCTTGAAGCCTACGTCTaGTATATAATACAATGCAGG +
Preference number: 3 (lower is better)
Translates to: AARNMAGREGLLFVLQSLLEAYV*YIIQCR
Trigger: CCTGCATTGTATTATATACAAGACGTAGGCTTCAAG...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGAT +
Preference number: 3 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFNSSPG*SPCIKD
Trigger: ATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTT...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTCGTAATGTAAAAGGTTaGCAGGGAAGTGCAAACGGG +
Preference number: 3 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFRNVKG*QGSANG
Trigger: CCCGTTTGCACTTCCCTGCAAACCTTTTACATTACG...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR TCA 72 bp CAGTGGGAAATCAACAACGATGGGCAGAGGTCACCATaGTGGGTGGAAGAAGAAACTTTGCCTATTTTGTGC +
Preference number: 3 (lower is better)
Translates to: QWEINNDGQRSP*WVEEETLPILC
Trigger: GCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGTTGATTTCCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACA +
Preference number: 3 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLGRVSC*FYNLST
Trigger: TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACA +
Preference number: 3 (lower is better)
Translates to: LCSRINRGVTQDLQISPHGRVSC*FYNLST
Trigger: TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAATTGTCCCACAGGATCTaGAAGCCTACGTCTTGTATA +
Preference number: 3 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKLSHRI*KPTSCI
Trigger: TATACAAGACGTAGGCTTCAAGATCCTGTGGGACAA...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCATTGTCCCACAGGATCTaGAAGCCTACGTCTTGTATA +
Preference number: 3 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPLSHRI*KPTSCI
Trigger: TATACAAGACGTAGGCTTCAAGATCCTGTGGGACAA...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTCCGCCCCGGAGGTTGTaGTGCACTAACTCTGAAATG +
Preference number: 3 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSPPRRL*CTNSEM
Trigger: CATTTCAGAGTTAGTGCACAACAACCTCCGGGGCGG...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp CAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: QVLSGKVRYSQFVPQDLEKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...TTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTCGTACTATTAAAGACTaGTCACCAGCTGCATCTGTC +
Preference number: 3 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFRTIKD*SPAASV
Trigger: GACAGATGCAGCTGGTGACAAGTCTTTAATAGTACG...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR TCA 72 bp ATGCTTGCATTCTTATACGTAACTATGGTTACAGTCTaGGGGTTCCTAAGCAGAGGGGGAGATGGGATTGGA +
Preference number: 3 (lower is better)
Translates to: MLAFLYVTMVTV*GFLSRGGDGIG
Trigger: TCCAATCCCATCTCCCCCTCTGCTTAGGAACCCTCAGACTGTAACCATAGTTACGTATAAGAATGCAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR GCA 72 bp GGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTaGCTATTTTGTGCAACCAAGAGCTCGACACAATAT +
Preference number: 3 (lower is better)
Translates to: GRGHHDGWKKKL*LFCATKSSTQY
Trigger: ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATCGTAATGTAAAAGGTTaGCAGGGAAGTGCAAACGGG +
Preference number: 3 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYRNVKG*QGSANG
Trigger: CCCGTTTGCACTTCCCTGCAAACCTTTTACATTACG...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGTGGAAGAAGAAACTTaGCCTATTTTGTGCAACCAA +
Preference number: 3 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKVEEET*PILCNQ
Trigger: TTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCAC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCCAGATTTCCCCACATTaGTGCAAGGCATGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLQISPH*CKAWQD
Trigger: GTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTG...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATACAGATTTCCCCACATTaGTGCAAGGCATGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIQISPH*CKAWQD
Trigger: GTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTG...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCACAGATTTCCCCACATTaGTGCAAGGCATGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: EETLPILCNQELDTIFSPQISPH*CKAWQD
Trigger: GTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTG...TGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGAAGAATAGGCACCTTTaGTTCACTAGAAAGTCTGTG +
Preference number: 3 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKKNRHL*FTRKSV
Trigger: CACAGACTTTCTAGTGAACAAAAGGTGCCTATTCTT...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAATTGCCGCCCCGGAGGTaGTTGTGCACTAACTCTGAA +
Preference number: 3 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKLPPRR*LCTNSE
Trigger: TTCAGAGTTAGTGCACAACAACCTCCGGGGCGGCAA...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTAAGTTGTGGGTTTTGTaGCCGCCCCGGAGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: LPILCNQELDTIFSPNSFKLWVL*PPRRLL
Trigger: CAACAACCTCCGGGGCGGCAACAAAACCCACAACTT...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR CCA 72 bp AAATCAACAACGATGGGCAGAGGTCACCATGATGGGTaGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAG +
Preference number: 3 (lower is better)
Translates to: KSTTMGRGHHDG*KKKLCLFCATK
Trigger: CTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGTTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR CCA 72 bp GCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTaGCCGCAGCAGACGCCGTCTACAGTGGGAAATCAA +
Preference number: 3 (lower is better)
Translates to: AIRNLNVRKGTK*PQQTPSTVGNQ
Trigger: TTGATTTCCCACTGTAGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TGTAAAAGGTTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCTTGAAGCCTACGTCTaGTATATAATACAATGCAGG +
Preference number: 3 (lower is better)
Translates to: CKRFAGKCKRVQNLSPAFLEAYV*YIIQCR
Trigger: CCTGCATTGTATTATATACAAGACGTAGGCTTCAAG...AAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAACCTTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGAATAAGGCCTGTGGCTaGATTGCTACTGGTTCGACA +
Preference number: 3 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQNKACG*IATGST
Trigger: TGTCGAACCAGTAGCAATCAAGCCACAGGCCTTATT...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATAAGAAGAGCAGAGCTTaGCTGAAACAATTTACATGT +
Preference number: 3 (lower is better)
Translates to: LCSRINRGVTQDLQISPHKKSRA*LKQFTC
Trigger: ACATGTAAATTGTTTCAGCAAAGCTCTGCTCTTCTT...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000198139.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAGGAGAGTCTCTTAGGTaGGGCATGCTCGTGTACAGA +
Preference number: 3 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKGESLR*GMLVYR
Trigger: TCTGTACACGAGCATGCCCAACCTAAGAGACTCTCC...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp TTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTGGGAGGGAGGGTCTCTaGTTTGTTTTACAATCTCTC +
Preference number: 3 (lower is better)
Translates to: FPSLVRKSKIQSICPTGSGREGL*FVLQSL
Trigger: GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCC...AGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TTGTCAGGAAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACTTGTCCCACAGGATCTaGAAGCCTACGTCTTGTATA +
Preference number: 3 (lower is better)
Translates to: LSGKVRYSQFVPQDLEAYLSHRI*KPTSCI
Trigger: TATACAAGACGTAGGCTTCAAGATCCTGTGGGACAA...GTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTTCCTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGTTGTCCCACAGGATCTaGAAGCCTACGTCTTGTATA +
Preference number: 3 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQLSHRI*KPTSCI
Trigger: TATACAAGACGTAGGCTTCAAGATCCTGTGGGACAA...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCCGTAATGTAAAAGGTTaGCAGGGAAGTGCAAACGGG +
Preference number: 3 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLRNVKG*QGSANG
Trigger: CCCGTTTGCACTTCCCTGCAAACCTTTTACATTACG...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTGTGGAAGAAGAAACTTaGCCTATTTTGTGCAACCAA +
Preference number: 3 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSVEEET*PILCNQ
Trigger: TTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCAC...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTGTCCCACAGGATCTaGAAGCCTACGTCTTGTATA +
Preference number: 3 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLLSHRI*KPTSCI
Trigger: TATACAAGACGTAGGCTTCAAGATCCTGTGGGACAA...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTCGTAATGTAAAAGGTTaGCAGGGAAGTGCAAACGGG +
Preference number: 3 (lower is better)
Translates to: LPILCNQELDTIFSPNSFRNVKG*QGSANG
Trigger: CCCGTTTGCACTTCCCTGCAAACCTTTTACATTACG...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTAATAAGGCCTGTGGCTaGATTGCTACTGGTTCGACA +
Preference number: 3 (lower is better)
Translates to: LPILCNQELDTIFSPNSFNKACG*IATGST
Trigger: TGTCGAACCAGTAGCAATCAAGCCACAGGCCTTATT...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTAAGAAGAGCAGAGCTTaGCTGAAACAATTTACATGT +
Preference number: 3 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSKKSRA*LKQFTC
Trigger: ACATGTAAATTGTTTCAGCAAAGCTCTGCTCTTCTT...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000198139.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp AACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCCGTACTATTAAAGACTaGTCACCAGCTGCATCTGTC +
Preference number: 3 (lower is better)
Translates to: NFAYFVQPRARHNIFSKLRTIKD*SPAASV
Trigger: GACAGATGCAGCTGGTGACAAGTCTTTAATAGTACG...GAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
3UTR-3UTR CAA 90 bp GTAAGATACAGTCAATTTGTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACA +
Preference number: 3 (lower is better)
Translates to: VRYSQFVPQDLEAYVLYIGRVSC*FYNLST
Trigger: TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC...TATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp CTTTTGGCAATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGCTTGAAGCCTACGTCTaGTATATAATACAATGCAGG +
Preference number: 3 (lower is better)
Translates to: LLAIRNLNVRKGTKWPQQLEAYV*YIIQCR
Trigger: CCTGCATTGTATTATATACAAGACGTAGGCTTCAAG...CTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTATTGCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR GCA 72 bp CTGCAAAGGATAAGCAGGCCAACTTATACTTATGCTTaGATTCTTATACGTAACTATGGTTACAGTCTGAGG +
Preference number: 3 (lower is better)
Translates to: LQRISRPTYTYA*ILIRNYGYSLR
Trigger: CCTCAGACTGTAACCATAGTTACGTATAAGAATGCAAGCATAAGTATAAGTTGGCCTGCTTATCCTTTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
3UTR-3UTR CAA 90 bp TTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAACTCTTTTGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACA +
Preference number: 3 (lower is better)
Translates to: LPILCNQELDTIFSPNSFGRVSC*FYNLST
Trigger: TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC...AAAAGAGTTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp AGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAAAGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACA +
Preference number: 3 (lower is better)
Translates to: RNFAYFVQPRARHNIFSKGRVSC*FYNLST
Trigger: TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCC...TTTGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp GAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATTTTCTCCAGTGGAAGAAGAAACTTaGCCTATTTTGTGCAACCAA +
Preference number: 3 (lower is better)
Translates to: EETLPILCNQELDTIFSPVEEET*PILCNQ
Trigger: TTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCAC...TGGAGAAAATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR TCA 72 bp AAAAGTAAGATACAGTCAATTTGTCCCACAGGATCTTaGAGCCTACGTCTTGTATATAATACAATGCAGGCC +
Preference number: 3 (lower is better)
Translates to: KSKIQSICPTGS*SLRLVYNTMQA
Trigger: GGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGACAAATTGACTGTATCTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
3UTR-3UTR CAA 90 bp ATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTAAGATACAGTCAATTTCTTGAAGCCTACGTCTaGTATATAATACAATGCAGG +
Preference number: 3 (lower is better)
Translates to: ISLLLFQVLSGKVRYSQFLEAYV*YIIQCR
Trigger: CCTGCATTGTATTATATACAAGACGTAGGCTTCAAG...AAATTGACTGTATCTTACTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGTCTCTGTTGGGGGACTGGAGGTGGTCGTCGGCCTCGGCCGTCAGCTGGGAGACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: ESLLGDWRWSSASAVSWETQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...CTCCCAGCTGACGGCCGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
3UTR CAA 72 bp AACCATGGGCCAACAGAGCCGAGTCTTCTGGCCGAGTaGGAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: NHGPTEPSLLAE*EGAAGPHWQRL
Trigger: GAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTCCAACTCGGCCAGAAGACTCGGCTCTGTTGGCCCATGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCGCTGGGGGATGAGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLGDERRLQLFVAELQPWHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...CCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCATCCCCCAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CCGCTGGGGGATGAGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: PLGDERRLQLFVAELQPWTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...CCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCTCATCCCCCAGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp GTACAGAGAGTCTCTGTTGGGGGACTGGAGGTGGTCGTCGGCCTCGGCCGTCAGCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VQRVSVGGLEVVVGLGRQHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...CTGACGGCCGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR CCA 90 bp CACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HSSWRETGPLPCLGCSPGHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...ACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR CCA 90 bp GACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: DLVHSPRPARRRGSPPCAEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...TGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR TCA 90 bp CACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: HDLHAVVVVRLAQGIAVVTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...AACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp GAGTCTCTGTTGGGGGACTGGAGGTGGTCGTCGGCCTCGGCCGTCAGCTGGGAGAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: ESLLGDWRWSSASAVSWENIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...CTCCCAGCTGACGGCCGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp CACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: HDLHAVVVVRLAQGIAVVSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...AACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR CCA 90 bp ACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTAGGGAGAGTCTCTTAGGTGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: TGPLPCLGCSPGRESLLGVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...ACCTAAGAGACTCTCCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: QTRCRSDLVHSPRPARRREHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...ACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR GCA 90 bp GACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAATTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: DLHAVVVVRLAQGIAVVEFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...TTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp TCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCCCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: SDLVHSPRPARRRGSPPCPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...GCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp TTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: LVHSPRPARRRGSPPCAGGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...CCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QTRCRSDLVHSPRPARRRHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...ACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR CCA 90 bp ATCGCGTCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: IASSSLLLPPITGLTGSLEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...CAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR CCA 90 bp TCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: SNAVSFRLSPQSTTCTPSGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...CGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200456.2
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: FSNAVSFRLSPQSTTCTPSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...CGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR GCA 90 bp TCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCAGTGAATGTCCTGTGTaGCAGAGGAGTACCGAGCAC +
Preference number: 4 (lower is better)
Translates to: SDLVHSPRPARRRGSPPCSECPV*QRSTEH
Trigger: GTGCTCGGTACTCCTCTGGCACACAGGACATTCACT...GCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200456.2
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
3UTR CAA 72 bp GCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGGTaGTCACCATGCATCAAAGATGAGGCGTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: ASSSLWRNSSPG*SPCIKDEASAT
Trigger: TGTGGCTGACGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: DLVHSPRPARRRGSPPCASSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...TGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200456.2
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGCCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTTTTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: FTAAAANHRFNRELELQVFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...AACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp CGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: RSDLVHSPRPARRRGSPPLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...AGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTACAGAGAGTCTCTGTTGGGGGACTGGAGGTGGTCGTCGGCCTCGGCCGTCAGTCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: VQRVSVGGLEVVVGLGRQSLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...CTGACGGCCGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATCGCGTCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: IASSSLLLPPITGLTGSLGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...CAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp ATCGCGTCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: IASSSLLLPPITGLTGSLSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...CAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGCTTGAGCTCCAAGTTGTGGGTTTTGTTGCCGCCCCGGAGGTTGTTGTGCACGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: ELELQVVGFVAAPEVVVHEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...GTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp ACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTAGGGAGAGTCTCTTAGGTCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: TGPLPCLGCSPGRESLLGQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...ACCTAAGAGACTCTCCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp CCTTCCCGGACGTCCCCCTCAGGGATGCACCCTTCTTTGTTAATGGGGATGATGCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: PSRTSPSGMHPSLLMGMMRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...CATCATCCCCATTAACAAAGAAGGGTGCATCCCTGAGGGGGACGTCCGGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTAGGGAGAGTCTCTTAGGTAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: TGPLPCLGCSPGRESLLGKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...ACCTAAGAGACTCTCCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp CGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTGAGCTGAAGGGGCATTaGATACAACTGTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: RSDLVHSPRPARRRGSPPELKGH*IQLFQR
Trigger: TCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTC...AGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000200456.2
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPTESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTAAGGCTGCTCTGCTaGAACCTTCTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVRLLC*NLLYSV
Trigger: CACCGAGTACAGAAGGTTTCAGCAGAGCAGCCTTAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGTAAGGCTGCTCTGCTaGAACCTTCTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPVRLLC*NLLYSV
Trigger: CACCGAGTACAGAAGGTTTCAGCAGAGCAGCCTTAC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPREPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTTGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: FTAAAANHRFNRELELQVEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...AACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp TCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SDLVHSPRPARRRGSPPCIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...GCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAATTGGTTAGGTGGCTaGAAGCGCACGTTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWNWLGG*KRTLCE
Trigger: CTCGCACAACGTGCGCTTGCAGCCACCTAACCAATT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: RGVTQDLQISPHLCKAWQSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...CTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTCATCTTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VIFTAAAANHRFNRELELHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...GAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAAGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp TCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCTATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SDLVHSPRPARRRGSPPCYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...GCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp GGTAGGGAGAGTCTCTTAGGTTGGGCATGCTCGTGTACAGAGAGTCTCTGTTGGTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: GRESLLGWACSCTESLCWWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...CCAACAGAGACTCTCTGTACACGAGCATGCCCAACCTAAGAGACTCTCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TCCACAGTCCACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: STVHDLHAVVVVRLAQGIKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...TATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTGGACTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
3UTR CAA 72 bp GGTTTAACCGGGAGCTTGAGCTCCAAGTTGTGGGTTTaGTTGCCGCCCCGGAGGTTGTTGTGCACTAACTCT +
Preference number: 4 (lower is better)
Translates to: GLTGSLSSKLWV*LPPRRLLCTNS
Trigger: AGAGTTAGTGCACAACAACCTCCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAAGCTCCCGGTTAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
ENSMUST00000200216.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTACCCCATCTGTAGGGTaGCGTATCGTGGTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: TAARNMAGREGLLFVLQSTPSVG*RIVVVG
Trigger: GCCAACTACCACGATACGTCACCCTACAGATGGGGT...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: DLHAVVVVRLAQGIAVVEIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...TTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp CACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTGGGAATACCGTAAAATaGAGTTATTGTTCCATACGT +
Preference number: 4 (lower is better)
Translates to: HSSWRETGPLPCLGCSPGGNTVK*SYCSIR
Trigger: ACGTATGGAACAATAACTTCATTTTACGGTATTCCC...ACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGATCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGTAGGGAGAGTCTCTTAGGTTGGGCATGCTCGTGTACAGAGAGTCTCTGTTGGTCCTGCTGTTCTGTTTaGCCGTGTTGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GRESLLGWACSCTESLCWSCCSV*PCWQRA
Trigger: AGCTCTCTGCCAACACGGTCAAACAGAACAGCAGGA...CCAACAGAGACTCTCTGTACACGAGCATGCCCAACCTAAGAGACTCTCCCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTTGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: HSSWRETGPLPCLGCSPGWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...ACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200456.2
CDS-3UTR TCA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACATGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACAGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QGTWPGGRVSCLFYNLSTGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...TGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTCGTTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: QTRCRSDLVHSPRPARRRCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...ACGACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TCTTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATGCATCAAAGATGAGGCGGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: SLWRNSSPGLSPCIKDEAAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...CGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTCCTCCTGGAGGGAGACAGGTCCTCTGCCATGTCTGGGCTGCTCTCCGGGTATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: HSSWRETGPLPCLGCSPGIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...ACCCGGAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCCTCCAGGAGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGCGGCGCCTCCAGCTCTTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATGCATACAAAGGTTCTTGTaGATAGTATTGCGGTCACTT +
Preference number: 4 (lower is better)
Translates to: SGASSSLWRNSSPGLSPCIQRFL*IVLRSL
Trigger: AAGTGACCGCAATACTATCCACAAGAACCTTTGTAT...GCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGCGCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACGACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: HDLHAVVVVRLAQGIAVVKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...AACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR CCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCTTGCACCAAGCCCCTaGCTTCTGCTCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNLAPSP*LLLSFI
Trigger: TATGAAGCTGAGCAGAAGTCAGGGGCTTGGTGCAAG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLATQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTTAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: FTAAAANHRFNRELELQVSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...AACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTTGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGCCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTCCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACCCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TAARNMAGREGLLFVLQSLLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGTAGGGAGAGTCTCTTAGGTTGGGCATGCTCGTGTACAGAGAGTCTCTGTTGGGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GRESLLGWACSCTESLCWAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...CCAACAGAGACTCTCTGTACACGAGCATGCCCAACCTAAGAGACTCTCCCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACATTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCCCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: AARNMAGREGLLFVLQSLPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACCTGGGTTGTCACCATaGATCAAAGATGAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGPGLSP*IKDEAS
Trigger: TGACGCCTCATCTTTGATGCATGGTGACAACCCAGG...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHRDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGGGTTGTTAGTGCCGTaGGGCCGGAGAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: NMAGREGLLFVLQSLYTAGLLVP*GRRRGF
Trigger: AAACCCTCTTCTCCGGCCCCACGGCACTAACAACCC...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGTAAGGCTGCTCTGCTaGAACCTTCTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSVRLLC*NLLYSV
Trigger: CACCGAGTACAGAAGGTTTCAGCAGAGCAGCCTTAC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: DLHAVVVVRLAQGIAVVEIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...TTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGATTGTCTTGGTACACTaGCCTGACCACATAGAGAAC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRIVLVH*PDHIEN
Trigger: GTTCTCTATGTGGTCAGGTCAGTGTACCAAGACAAT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAACCCAAAGGACCAGGTaGGGCCCAGGAGACACAGCA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVTQRTR*GPGDTA
Trigger: TGCTGTGTCTCCTGGGCCTCACCTGGTCCTTTGGGT...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GACCTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAATTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: DLHAVVVVRLAQGIAVVEFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...TTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
ENSMUST00000200456.2
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSRCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGTAAAAGGTTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: CKRFAGKCKRVQNLSPAFVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...AAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAACCTTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACCCGACCCATGAGGTCTaGACCCAGCTTTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHPTHEV*TQLYGC
Trigger: GCAACCATAAAGCTGGGTGCAGACCTCATGGGTCGG...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAATTGGTTAGGTGGCTaGAAGCGCACGTTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSNWLGG*KRTLCE
Trigger: CTCGCACAACGTGCGCTTGCAGCCACCTAACCAATT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCGAGCTGAAGGGGCATTaGATACAACTGTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: AARNMAGREGLLFVLQSLELKGH*IQLFQR
Trigger: TCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTC...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
CDS-3UTR GCA 90 bp AACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCACGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NMAGREGLLFVLQSLYTARGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...TGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGGGGGAGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATTGCTTAACATACGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: RGRWDWKGPPWSSLLLNIRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...TATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGGGAGACAGGTCCTCTaGCATGTCTGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVGRQVL*HVWAAL
Trigger: GAGAGCAGCCCAGACATGGCAGAGGACCTGTCTCCC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPSLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTCGCTTTCATTGTCTTaGTACACTGACCTGACCACA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRSLSLS*YTDLTT
Trigger: TGTGGTCAGGTCAGTGTACCAAGACAATGAAAGCGA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTCACTGCTGCTGCCGCCAATCACCGGTTTAACCGGGAGCTTGAGCTCCAAGTTTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: FTAAAANHRFNRELELQVCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...AACTTGGAGCTCAAGCTCCCGGTTAAACCGGTGATTGGCGGCAGCAGCAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TCTCAAACGCGGTGTCGTTCAGACTTAGTCCACAGTCCACGACCTGCACGCCGTACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SQTRCRSDLVHSPRPARRTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...ACGGCGTGCAGGTCGTGGACTGTGGACTAAGTCTGAACGACACCGCGTTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCAGAGACGGCTGGAGGTaGCTTTGTCCCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLARDGWR*LCPSAS
Trigger: GGAAGCAGAGGGACAAAGCCACCTCCAGCCGTCTCT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGCATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATCATGGAGACCCTGGTTaGTTCCAAAAGGTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNHGDPG*FQKVVC
Trigger: GCAGACAACCTTTTGGAACCAACCAGGGTCTCCATG...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGCAAAATTGGTTAGGTaGCTGCAAGCGCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNAKLVR*LQAHVV
Trigger: CACAACGTGCGCTTGCAGCCACCTAACCAATTTTGC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAACACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGAGCACTGGTGCGGGTaGTGGATGCCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVEHWCG*WMPSQS
Trigger: GCTCTGTGAAGGCATCCACCACCCGCACCAGTGCTC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHLSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGCCTCCAGCTCTTTGTaGCGGAACTCCAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLASSSL*RNSSPG
Trigger: CCCAGGGCTGGAGTTCCGCCACAAAGAGCTGGAGGC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATCTCTGTTGGGGGACTaGAGGTGGTCGTCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLSLLGD*RWSSAS
Trigger: CGAGGCCGACGACCACCTCCAGTCCCCCAACAGAGA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGGGGAGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATTGCTTAACATAACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: RGRWDWKGPPWSSLLLNITESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...TATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106128.7
ENSMUST00000198139.5
CDS-3UTR CCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATGTCCTCTGCCATGTCTaGGCTGCTCTCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYVLCHV*AALRVG
Trigger: CCCTACCCGGAGAGCAGCCCAGACATGGCAGAGGAC...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
3UTR CAA 72 bp CCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTaGTTTTACAATCTCTCTACACAGCAGCAGAAACGT +
Preference number: 4 (lower is better)
Translates to: PQGTWPGGRVSC*FYNLSTQQQKR
Trigger: ACGTTTCTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGGGGTGACTCAAGACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGAGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: RGDSRPPDFPTFVQGMAGVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...TCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: KEHGREGGSLVCFTISLHEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...GTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTTTGAACAGCTCAGCTaGAGAAGTTATTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPFEQLS*RSYCHS
Trigger: GCTGTGACAATAACTTCTTCAGCTGAGCTGTTCAAA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGATATTGTGGTTTTaGACAGCTCAGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPWILWF*TAQLKK
Trigger: CTTCTTCAGCTGAGCTGTTCAAAACCACAATATCCA...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGGCCAGGAAGAAAAAGTaGAGAAGCCCTGCGAACACG +
Preference number: 4 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVARKKK*RSPANT
Trigger: CGTGTTCGCAGGGCTTCTTCACTTTTTCTTCCTGGC...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200216.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGCACTAACTCTGAAATaGTCATTTTCTCAAACGCGG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPALTLK*SFSQTR
Trigger: CCGCGTTTGAGAAAATGATCATTTCAGAGTTAGTGC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATGGTACAGAAGCGAGTaGGTCCGCTGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLWYRSE*VRWGMS
Trigger: GCTCATCCCCCAGCGGACTCACTCGCTTCTGTACCA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCAAGCCCCTGACTTCTaGTCAGCTTCATATATACAT +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPQAPDF*SASYIH
Trigger: ATGTATATATGAAGCTGAGCAGAAGTCAGGGGCTTG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGCAAGCCCCTGACTTCTaGTCAGCTTCATATATACAT +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRQAPDF*SASYIH
Trigger: ATGTATATATGAAGCTGAGCAGAAGTCAGGGGCTTG...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCAAGCCCCTGACTTCTaGTCAGCTTCATATATACAT +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWQAPDF*SASYIH
Trigger: ATGTATATATGAAGCTGAGCAGAAGTCAGGGGCTTG...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACACCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPNGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TCTTTGTGGCGGAACTCCAGCCCTGGGTTGTCACCATGCATCAAAGATGAGGCGAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SLWRNSSPGLSPCIKDEANGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...CGCCTCATCTTTGATGCATGGTGACAACCCAGGGCTGGAGTTCCGCCACAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGTGGCTTTGTCCCTCTaGTTCCGTCCTGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLVALSL*FRPEDQ
Trigger: CTGGTCCTCAGGACGGAAGCAGAGGGACAAAGCCAC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATTCCCGTGGAAGCCATaGACAGATACGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVFPWKP*TDTRPS
Trigger: GGACGGCCTCGTATCTGTGCATGGCTTCCACGGGAA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAAAGTCTTGGACCTaGCCTTCCGTGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSLKSWT*PSVLRT
Trigger: TGTCCTCAGCACGGAAGGGCAGGTCCAAGACTTTAA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTAATTGGTTAGGTGGCTaGAAGCGCACGTTGTGCGAG +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLNWLGG*KRTLCE
Trigger: CTCGCACAACGTGCGCTTGCAGCCACCTAACCAATT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTCAGCAACAGGTGGTaGACTCCATCTTTATACGCA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVSNRW*TPSLYA
Trigger: TGCGTATAAAGATGGAGTGCACCACCTGTTGCTGAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAAGTACCGAGCACTGGTaGGGGTGGTGGATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLSTEHW*GWWMPS
Trigger: TGAAGGCATCCACCACCCGCACCAGTGCTCGGTACT...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGAGCTGAAGGGGCATTaGATACAACTGTTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNELKGH*IQLFQR
Trigger: TCGCTGAAACAGTTGTATGCAATGCCCCTTCAGCTC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
CDS-3UTR GCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLARGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCCCCGGAGGTTGTTGTaGACTAACTCTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: TAARNMAGREGLLFVLQSPRRLL*TNSEMI
Trigger: GATCATTTCAGAGTTAGTGCACAACAACCTCCGGGG...AGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLARHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGTAAAAGGTTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: CKRFAGKCKRVQNLSPAFRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...AAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAACCTTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTCCCACAGGATCTTGAAGCCTACGTCTTGTATATAATACAATGCAGGCCTACATCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: VPQDLEAYVLYIIQCRPTSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...TGTAGGCCTGCATTGTATTATATACAAGACGTAGGCTTCAAGATCCTGTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTTATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGCAATATACTGGTACTaGTTGGGAAAAGGAACGTCC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACAIYWY*LGKGTS
Trigger: GGACGTTCCTTTTCCCAACCAGTACCAGTATATTGC...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACAACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TTMGRGHHDGWKKKLCLFGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...AAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLASLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CTCTGTTCCAGAATAAACAGAGGGGTGACTCAAGACCTCCAGATTTCCCCACATGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: LCSRINRGVTQDLQISPHGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...ATGTGGGGAAATCTGGAGGTCTTGAGTCACCCCTCTGTTTATTCTGGAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTCCACTTCTGATCTTCTaGGCCAGCTGGTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCPLLIF*ASWFTQ
Trigger: CTGGGTGAACCAGCTGGCCCAGAAGATCAGAAGTGG...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTATTTTCTGTTGGCATaGAGACCCTGGTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: AARNMAGREGLLFVLQSLYFLLA*RPWLVP
Trigger: TGGAACCAACCAGGGTCTCCATGCCAACAGAAAATA...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCGGGAATTTAAAGTCTTaGACCTGCCCTTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSGNLKS*TCPSVL
Trigger: CAGCACGGAAGGGCAGGTCCAAGACTTTAAATTCCC...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GACCTCCAGATTTCCCCACATTTGTGCAAGGCATGGCAGGACTTCAAAAAGTTTTGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: DLQISPHLCKAWQDFKKFWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...AAACTTTTTGAAGTCCTGCCATGCCTTGCACAAATGTGGGGAAATCTGGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAAGAGCTCGACACAATATGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: GWKKKLCLFCATKSSTQYVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...ATATTGTGTCGAGCTCTTGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTAGTGTTGGCAGAGAGCTaGATGGAGCTGCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLVLAES*MELPNP
Trigger: GGGGTTGGGCAGCTCCATCCAGCTCTCTGCCAACAC...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATCAAAGATGAGGCGTCAGCCACAATCGCGTCATCTTCACTGCTGCTGCCGCCAACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: IKDEASATIASSSLLLPPTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...TGGCGGCAGCAGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACACTGGTGCGGGTGGTaGATGCCTTCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLHWCGW*MPSQSC
Trigger: ACAGCTCTGTGAAGGCATCCACCACCCGCACCAGTG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCTTGAGCTCCAAGTTGTaGGTTTTGTTGCCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLALSSKL*VLLPPR
Trigger: CCGGGGCGGCAACAAAACCCACAACTTGGAGCTCAA...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: KCKRVQNLSPAFPSLVRKTESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...TTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACCAACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: AEVTMMGGRRNFAYFVQPTESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...TGGTTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCACAGAGAGTCTCTGTTaGGGGACTGGAGGTGGTCGT +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLATESLC*GTGGGR
Trigger: ACGACCACCTCCAGTCCCCCAACAGAGACTCTCTGT...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACGTTCTCACTCCTCCTaGAGGGAGACAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRSHSS*RETGPL
Trigger: CAGAGGACCTGTCTCCCTCCAGGAGGAGTGAGAACG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPGQLQG*AYFYSK
Trigger: TTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGGGCCAGCTCCAAGGTTaGGCATACTTTTATAGTAAA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWGQLQG*AYFYSK
Trigger: TTTACTATAAAAGTATGCCCAACCTTGGAGCTGGCC...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ATCAAAGATGAGGCGTCAGCCACAATCGCGTCATCTTCACTGCTGCTGCCGCCATGTGATGTCAGTCCTTaGTTAAGGGTAGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: IKDEASATIASSSLLLPPCDVSP*LRVEVL
Trigger: TAGCACTTCTACCCTTAACCAAGGACTGACATCACA...TGGCGGCAGCAGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200216.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAAGGCTGCTCTGCTaGAACCTTCTGTACTCGGTG +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAVRLLC*NLLYSV
Trigger: CACCGAGTACAGAAGGTTTCAGCAGAGCAGCCTTAC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTCGATTGTTGCACCTTTaGGTCATGATTTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACRLLHL*VMILKA
Trigger: TGCCTTCAAAATCATGACTCAAAGGTGCAACAATCG...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTATCAGGAAATACATCTaGCCCGGTAACTACTATACA +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPIRKYI*PGNYYT
Trigger: TGTATAGTAGTTACCGGGTCAGATGTATTTCCTGAT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAACTTGCACCAAGCCCCTaGCTTCTGCTCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQLAPSP*LLLSFI
Trigger: TATGAAGCTGAGCAGAAGTCAGGGGCTTGGTGCAAG...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGGGGGAGATGGGATTGGAAAGGACCACCTTGGTCGAGTCTATTGCTTAACATAATTTTATCTGCAGCCTaGAGGGGGTCCTTGCACCAA +
Preference number: 4 (lower is better)
Translates to: RGRWDWKGPPWSSLLLNIILSAA*RGSLHQ
Trigger: TTGGTGCAAGGACCCCCTTCAGGCTGCAGATAAAAT...TATGTTAAGCAATAGACTCGACCAAGGTGGTCCTTTCCAATCCCATCTCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000106128.7
CDS-3UTR TCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAGCAGCAGGTCTGGCGGCTGTTTTaGAAATCTTCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: WPGGRVSCLFYNLSTQQQVWRLF*KSSKEA
Trigger: TGCCTCTTTAGAAGATTTTCAAAACAGCCGCCAGAC...CTGCTGCTGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGAACCCCACATATCATaGAAGCATTGGACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAEPHIS*KHWTPH
Trigger: GTGCGGCGTCCAATGCTTTCATGATATGTGGGGTTC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCATTCTCTCCACTTCTaGTCTTCTGGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAHSLHF*SSGPAG
Trigger: ACCAGCTGGCCCAGAAGATCAGAAGTGGAGAGAATG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTGTGTGCGCCTGCTCTaGAGAATTCATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSCVRLL*RIHVFP
Trigger: TGGAAACACATGAATTCTTCAGAGCAGGCGCACACA...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: RWAEVTMMGGRRNFAYFVQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...CACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTCAATGTGTGGCAGTGTaGAAAGCACGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLQCVAV*KARDLS
Trigger: TGACAGATCCCGTGCTTTTCACACTGCCACACATTG...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CTGCACGCCGTCGTGGTAGTCCGCCTTGCGCAGGGAATAGCTGTTGTTGAAGTTTGGTTTCAGAGTGTTTaGATGTTTCACCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: LHAVVVVRLAQGIAVVEVWFQSV*MFHHFA
Trigger: TGCAAAATGGTGAAACATTCAAACACTCTGAAACCA...AACTTCAACAACAGCTATTCCCTGCGCAAGGCGGACTACCACGACGGCGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000196526.5
ENSMUST00000197348.5
ENSMUST00000200154.5
CDS-3UTR TCA 90 bp GGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGTTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: GSCRAPLAASLSINTCMWFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...CCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGTTTCGTACTTTCTTTTaGAGAGCACAGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRFRTFF*RAQWKM
Trigger: CATCTTCCACTGTGCTCTTCAAAAGAAAGTACGAAA...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAGCAGTACCAGTGTCTaGAGCACTTGCCATACTCTT +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSSSTSV*STCHTL
Trigger: AAGAGTATGGCAAGTGCTTCAGACACTGGTACTGCT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCGCTATTGATGTCACCTaGGATAAAAGACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPAIDVT*DKRRFR
Trigger: TCTGAATCGTCTTTTATCTCAGGTGACATCAATAGC...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200216.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp GCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCGGGAATAGCTGTTGTTaGAGTTACCATTTAGCGGTA +
Preference number: 4 (lower is better)
Translates to: AARNMAGREGLLFVLQSLGNSCC*SYHLAV
Trigger: TACCGCTAAATGGTAACTTCAACAACAGCTATTCCC...GAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTCGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR TCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACGCTATTGCCCCTGCTaGTCTGGTAGCACATGTGGA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRYCPC*SGSTCG
Trigger: TCCACATGTGCTACCAGATCAGCAGGGGCAATAGCG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTACCTGAAGGGGGTCCTTaGACCAAGCCCCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLPEGGP*TKPLTS
Trigger: AGAAGTCAGGGGCTTGGTGCAAGGACCCCCTTCAGG...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCTATTAACGTATCGGTaGGGTAGGGAGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLALLTYR*GRESRA
Trigger: TGCCCTGGACTCCCTACCGCACCGATACGTTAATAG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTGTCAGGAAAAGGCCGTTCTCATCCACTaGGAGGTCAATGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VQTGAESLSCFSKSCQEKAVLIH*EVNVCL
Trigger: AAGACAGACATTGACCTCGCAGTGGATGAGAACGGC...CTTTTCCTGACAAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCCGCTGTCTCCCAGGTTaGCTCGAATCGAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLARCLPG*LESKSV
Trigger: TACACTCTTCGATTCGAGGCAACCTGGGAGACAGCG...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQNGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTAATGGTGTTCTTGCCTaGTTCGCTTTCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACNGVLA*FAFIVL
Trigger: CAAGACAATGAAAGCGAAGCAGGCAAGAACACCATT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCAACATTGTGGCTGTGTaGGCCTGCTCTGAAGAATTC +
Preference number: 4 (lower is better)
Translates to: PHWQRLYQLILACGPRNSNIVAV*ACSEEF
Trigger: GAATTCTTCAGAGCAGGCGCACACAGCCACAATGTT...GGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGCCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: AGPHWQRLYQLILACGPRPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...CCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp AGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCCCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SCRAPLAASLSINTCMWPPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...GGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTCCAGAAGGAGCAGTTTaGATTGAAATAATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPPEGAV*IEIIVR
Trigger: CCTGACAATTATTTCAATGCAAACTGCTCCTTCTGG...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp TTTGCAGGGAAGTGCAAACGGGTGCAGAATCTCTCTCCTGCTTTTCCAAGTCTTAAAGTGAAGAAGCCCTaGGAACACGGGGCATGCAAT +
Preference number: 4 (lower is better)
Translates to: FAGKCKRVQNLSPAFPSLKVKKP*EHGACN
Trigger: ATTGCATGCCCCGTGTTCGCAGGGCTTCTTCACTTT...AAGACTTGGAAAAGCAGGAGAGAGATTCTGCACCCGTTTGCACTTCCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACGTGGTAGTCCGCCTTaGGCAGGGAATAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVRGSPP*AGNSCC
Trigger: ACAACAGCTATTCCCTGCGCAAGGCGGACTACCACG...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp ATAAGAAATTTAAATGTAAGAAAGGGGACTAAGTGGCCGCAGCAGACGCCGTCTCGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: IRNLNVRKGTKWPQQTPSRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...AGACGGCGTCTGCTGCGGCCACTTAGTCCCCTTTCTTACATTTAAATTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTACGTCATCTTCACTGCTaGTGCCGCCAATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLRHLHC*CRQSPV
Trigger: AACCGGTGATTGGCGGCAGCAGCAGTGAAGATGACG...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR GCA 90 bp CGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTACTATCGCGTCATCTTCACTaGTGCTGCCGCCAATCACCG +
Preference number: 4 (lower is better)
Translates to: RLYQLILACGPRNSLAVLSRHLH*CCRQSP
Trigger: CGGTGATTGGCGGCAGCAGCAGTGAAGATGACGCGA...TAGTACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000168352.2
ENSMUST00000195988.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTACCGTCTACTCGGTTTaGAAGTTTGTATGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: AAGPHWQRLYQLILACGPTVYSV*KFVCCC
Trigger: ACAACAACATACAAACTTCCAAACCGAGTAGACGGT...AGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTGTAGATGTAGTCAATaGTGTTCTTGCCTGCTTCGC +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNCRCSQ*CSCLLR
Trigger: GCGAAGCAGGCAAGAACACCATTGACTACATCTACA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTATACTGGTACTGGTTaGGAAAAGGAACGTCCACGT +
Preference number: 4 (lower is better)
Translates to: GPHWQRLYQLILACGPRNYTGTG*EKERPR
Trigger: ACGTGGACGTTCCTTTTCCCAACCAGTACCAGTATA...ATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTACTGCAGCAATATACTaGTACTGGTTGGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACTAAIY*YWLGKG
Trigger: TCCTTTTCCCAACCAGTACCAGTATATTGCTGCAGT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCATGCATCAAAGATGAGGCGTCAGCCACAATCGCGTCATCTTCACTGCTGCTGGAGTTGGTTGTCTCTTaGATTATAATCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PCIKDEASATIASSSLLLELVVS*IIIHCS
Trigger: GCTGCAGTGGATTATAATCCAAGAGACAACCAACTC...CAGCAGCAGTGAAGATGACGCGATTGTGGCTGACGCCTCATCTTTGATGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196526.5
ENSMUST00000200154.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTAGGTTGTAGAGACGGCTaGAGGTGGCTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVGCRDG*RWLCPS
Trigger: AGAGGGACAAAGCCACCTCCAGCCGTCTCTACAACC...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGTATCCCTCTTGTTCCCTTaGGACAGGGTCGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: QRLYQLILACGPRNSLAVSLLFP*DRVAQP
Trigger: TGGTTGAGCGACCCTGTCCCAAGGGAACAAGAGGGA...TACGGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTAGCCGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: WQRLYQLILACGPRNSLAGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...GGCTAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp TGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTGCAAGGTTCCATGTTCCCGTaGAAGCCATGCACAGATACG +
Preference number: 4 (lower is better)
Translates to: WAEVTMMGGRRNFAYFVQGSMFP*KPCTDT
Trigger: CGTATCTGTGCATGGCTTCCACGGGAACATGGAACC...TTGCACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CACTGGCAGCGTCTCTATCAATTAATACTTGCATGTGGCCCTAGGAATTCCTTATGGCAGAGAGCTGGATaGAGCTGCCCAACCCCTTTA +
Preference number: 4 (lower is better)
Translates to: HWQRLYQLILACGPRNSLWQRAG*SCPTPL
Trigger: TAAAGGGGTTGGGCAGCTCCATCCAGCTCTCTGCCA...TAAGGAATTCCTAGGGCCACATGCAAGTATTAATTGATAGAGACGCTGCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTACCAATATCCCATCATaGTTCTCTCTGAGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACTNIPS*FSLSSS
Trigger: GGAACTACTCAGAGAGAACCATGATGGGATATTGGT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5
ENSMUST00000199750.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp ACGATGGGCAGAGGTCACCATGATGGGTGGAAGAAGAAACTTTGCCTATTTTGTACCAGCTTGCAGCCCTaGGTAGACCAATATCCCATC +
Preference number: 4 (lower is better)
Translates to: TMGRGHHDGWKKKLCLFCTSLQP*VDQYPI
Trigger: GATGGGATATTGGTCTACCCAGGGCTGCAAGCTGGT...ACAAAATAGGCAAAGTTTCTTCTTCCACCCATCATGGTGACCTCTGCCCATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp AGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAATCTCTCTACACAAACTCTTGTAGTCAATaGCTGCTGAGACGCCGACCA +
Preference number: 4 (lower is better)
Translates to: RNMAGREGLLFVLQSLYTNSCSQ*LLRRRP
Trigger: TGGTCGGCGTCTCAGCAGCCATTGACTACAAGAGTT...TGTGTAGAGAGATTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp CCAACTGCCGCAAGGAACATGGCCGGGAGGGAGGGTCTCTTGTTTGTTTTACAAAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PTAARNMAGREGLLFVLQKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...TTGTAAAACAAACAAGAGACCCTCCCTCCCGGCCATGTTCCTTGCGGCAGTTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000106128.7
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000200154.5
ENSMUST00000200543.5
CDS-3UTR CCA 90 bp GAGGGAGCTGCAGGGCCCCACTGGCAGCGTCTCTATCAATTAATACTTGCATGTAAAATGAAGAGTCCCTaGAAAGCATTAAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: EGAAGPHWQRLYQLILACKMKSP*KALKAV
Trigger: CACCGCCTTTAATGCTTTCCAGGGACTCTTCATTTT...ACATGCAAGTATTAATTGATAGAGACGCTGCCAGTGGGGCCCTGCAGCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000106128.7
ENSMUST00000195988.5
ENSMUST00000196526.5
ENSMUST00000197567.5
ENSMUST00000198139.5
ENSMUST00000198779.5
ENSMUST00000199059.5
ENSMUST00000199238.5