RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000013033

Ensembl transcript IDs: ENSMUST00000045393.15, ENSMUST00000124355.8, ENSMUST00000131717.2, ENSMUST00000132500.8, ENSMUST00000141158.8, ENSMUST00000152978.8

Found 990 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCTTCCGGGCTGCTGTCCGGGTAGGAGGGCGAGTCCCGCAGGTTaGCCCCGCTGGCATAGAGGGAGTCCCGGCCGGGAGGGGAGGAGA +
Preference number: 1 (lower is better)
Translates to: ALPGCCPGRRASPAG*PRWHRGSPGREGRR
Trigger: TCTCCTCCCCTCCCGGCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCGCCCTCCTACCCGGACAGCAGCCCGGAAGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp ACTCCCTGGTCCACCGGCCTCGTCCTCACTGACCCCTGGCACAGGTaGCACAGGTGGCTCTGGTGGAGGCCCTTTGGCACCCCCACTGGC +
Preference number: 1 (lower is better)
Translates to: TPWSTGLVLTDPWHR*HRWLWWRPFGTPTG
Trigger: GCCAGTGGGGGTGCCAAAGGGCCTCCACCAGAGCCACCTGTGCCACCTGTGCCAGGGGTCAGTGAGGACGAGGCCGGTGGACCAGGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 90 bp CGGCTCCCACCCCGGCTGGGATGTACACATACAGGAAGTCCTGGCTaGCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGG +
Preference number: 1 (lower is better)
Translates to: RLPPRLGCTHTGSPG*QGWPLHCSGESPGW
Trigger: CCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAGCCAGGACTTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 90 bp CCCCGGCTGGGATGTACACATACAGGAAGTCCTGGCTGCCAGGGCTaGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTG +
Preference number: 1 (lower is better)
Translates to: PRLGCTHTGSPGCQG*PLHCSGESPGWPGL
Trigger: CAGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAGCCAGGACTTCCTGTATGTGTACATCCCAGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 90 bp CTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAAGTCCTaGCTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGG +
Preference number: 1 (lower is better)
Translates to: LAAPTPAGMYTYRKS*LPGLAAALFRRKSG
Trigger: CCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAGCCAGGACTTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR TCA 90 bp CCAGAGCCCCTCCTGGATTCCCTCCCTGGCCAGGCCTCGGGTCCATaGGGCCCCTCAGAGACTAGTGACCAACTGCATTTGCCCGTCCCC +
Preference number: 1 (lower is better)
Translates to: PEPLLDSLPGQASGP*GPSETSDQLHLPVP
Trigger: GGGGACGGGCAAATGCAGTTGGTCACTAGTCTCTGAGGGGCCTCATGGACCCGAGGCCTGGCCAGGGAGGGAATCCAGGAGGGGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp CCTCGAGTTCCCTTGGGGCAAGGTCTCTCCACCAGCATACCCTGTTaGGTAGCTGGCCACTGGACCCGCCGGACCTCTCTGGGTTCACAG +
Preference number: 1 (lower is better)
Translates to: PRVPLGQGLSTSIPC*VAGHWTRRTSLGSQ
Trigger: CTGTGAACCCAGAGAGGTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGTGGAGAGACCTTGCCCCAAGGGAACTCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp TCCCTTGGGGCAAGGTCTCTCCACCAGCATACCCTGTTGGGTAGCTaGCCACTGGACCCGCCGGACCTCTCTGGGTTCACAGAAGAGCTC +
Preference number: 1 (lower is better)
Translates to: SLGARSLHQHTLLGS*PLDPPDLSGFTEEL
Trigger: GAGCTCTTCTGTGAACCCAGAGAGGTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGTGGAGAGACCTTGCCCCAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp CCCTCAGCCAGCAGGCCTTTTCAGTGCCGTAGCTTCGGTAGTCAATaGCTGCTGCGATGCCGACCACCAGGGCTGGGAAGCAGTAGCCAC +
Preference number: 1 (lower is better)
Translates to: PSASRPFQCRSFGSQ*LLRCRPPGLGSSSH
Trigger: GTGGCTACTGCTTCCCAGCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCTACGGCACTGAAAAGGCCTGCTGGCTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp CCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTaGGCTGCAGGTGCCCGGTGGCTTCAAGTGATGAGATTTTCTTAC +
Preference number: 1 (lower is better)
Translates to: PGLAAALFRRKSGLA*AAGARWLQVMRFSY
Trigger: GTAAGAAAATCTCATCACTTGAAGCCACCGGGCACCTGCAGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 90 bp TGTCTCTGGAGTGTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTaGGATGTACACATACAGGAAGTCCTGGCTGCCAGGGCTGGCCGC +
Preference number: 1 (lower is better)
Translates to: CLWSVKSCSGGSHPG*DVHIQEVLAARAGR
Trigger: GCGGCCAGCCCTGGCAGCCAGGACTTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTACACTCCAGAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR TCA 90 bp TCGGCTCTGGGTCCCTGTGTAGTATCGGGTGTTACTTCGCATGGCTaGGGTCTTAAGGGAGCCGTGAGTGCCCCCAGGTGGGGAGCGGAT +
Preference number: 1 (lower is better)
Translates to: SALGPCVVSGVTSHG*GLKGAVSAPRWGAD
Trigger: ATCCGCTCCCCACCTGGGGGCACTCACGGCTCCCTTAAGACCTCAGCCATGCGAAGTAACACCCGATACTACACAGGGACCCAGAGCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 90 bp GAAGAGGAGGCCGAAAGCCCAGGTGAGGCCCAGCAGGAAGAGCAGTaGAATGGCACCCAGCGCCCAGGACTTGATGTTGTCAAGGCGACT +
Preference number: 1 (lower is better)
Translates to: EEEAESPGEAQQEEQ*NGTQRPGLDVVKAT
Trigger: AGTCGCCTTGACAACATCAAGTCCTGGGCGCTGGGTGCCATTGCACTGCTCTTCCTGCTGGGCCTCACCTGGGCTTTCGGCCTCCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp CGTGTCCCTTGCTGTCTCCTTCCACAGGCAGGGAGCTTCAGAAGTTaGTCACACCTACCAGCTTCTCTCTCACTCCCAGGGCCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: RVPCCLLPQAGSFRS*SHLPASLSLPGPWG
Trigger: CCCCCAGGGCCCTGGGAGTGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAGGAGACAGCAAGGGACACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR GCA 90 bp GGTGGAGGCCCTTTGGCACCCCCACTGGCCCCTCGCAGGTTGTTGTaGACCAGCTCTGAGATGATCATCTTCTCAAAGGCGGCAGCATCT +
Preference number: 1 (lower is better)
Translates to: GGGPLAPPLAPRRLL*TSSEMIIFSKAAAS
Trigger: AGATGCTGCCGCCTTTGAGAAGATGATCATCTCAGAGCTGGTGCACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAGGGCCTCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp GCCCAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTaGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCATCAGGAGTCACC +
Preference number: 1 (lower is better)
Translates to: AQPTGLGTAQIWSLQ*VRGPVGSCASSGVT
Trigger: GGTGACTCCTGATGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR TCA 90 bp CGAGGAGCTCCTCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTaGTGGCCTTGGGCCTGGGCTGAGTCAAGTCCTCTGGCTCCTAGG +
Preference number: 1 (lower is better)
Translates to: RGAPHPTASSSFIGV*WPWAWAESSPLAPR
Trigger: CCTAGGAGCCAGAGGACTTGACTCAGCCCAGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAGCTCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR TCA 90 bp CAGTCTGTACGTGGTGGTGTGGCGTGCGGCTACATAGTCCTCCCATaGGGCATATTCAGTCAATGTGTCCGTGCGGTAGGGGATCCAGGG +
Preference number: 1 (lower is better)
Translates to: QSVRGGVACGYIVLP*GIFSQCVRAVGDPG
Trigger: CCCTGGATCCCCTACCGCACGGACACATTGACTGAATATGCCTCATGGGAGGACTATGTAGCCGCACGCCACACCACCACGTACAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 90 bp GCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTaGAGGTGCCCGGTGGCTTCAAGTGATGAGATTTTCTTACTTTTT +
Preference number: 1 (lower is better)
Translates to: AGRCTVPEKVRAGLG*RCPVASSDEIFLLF
Trigger: AAAAAGTAAGAAAATCTCATCACTTGAAGCCACCGGGCACCTGCAGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 90 bp AGACTGCGCCATCGTAGACCACAAAGCCAGTGCCATCTACACGGTTaGGCAGTCTGTACGTGGTGGTGTGGCGTGCGGCTACATAGTCCT +
Preference number: 1 (lower is better)
Translates to: RLRHRRPQSQCHLHG*AVCTWWCGVRLHSP
Trigger: AGGACTATGTAGCCGCACGCCACACCACCACGTACAGACTGCCCAACCGTGTAGATGGCACTGGCTTTGTGGTCTACGATGGCGCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp CCCCAGGAACCACATCTGACCTTCCTTCCCTTGCCCTTCTCAGGATaGGACACCAGCCTCCTCCTGCCTGCTGTGAGTCCTGAAGTGATA +
Preference number: 1 (lower is better)
Translates to: PQEPHLTFLPLPFSG*DTSLLLPAVSPEVI
Trigger: TATCACTTCAGGACTCACAGCAGGCAGGAGGAGGCTGGTGTCCCATCCTGAGAAGGGCAAGGGAAGGAAGGTCAGATGTGGTTCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR GCA 90 bp AGGCCTTTTCAGTGCCGTAGCTTCGGTAGTCAATGGCTGCTGCGATaGCGACCACCAGGGCTGGGAAGCAGTAGCCACCTAGGTAATAGT +
Preference number: 1 (lower is better)
Translates to: RPFQCRSFGSQWLLR*RPPGLGSSSHLGNS
Trigger: ACTATTACCTAGGTGGCTACTGCTTCCCAGCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCTACGGCACTGAAAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 90 bp CATCCACCTCCTCCTCAGCTCCTACCTAGAGTCCCTCCCCCACAATaGAAAGAAGCTCATGGCAGCAGCAAGCTGAGACCCAAGGATGCT +
Preference number: 1 (lower is better)
Translates to: HPPPPQLLPRVPPPQ*KEAHGSSKLRPKDA
Trigger: AGCATCCTTGGGTCTCAGCTTGCTGCTGCCATGAGCTTCTTTGCATTGTGGGGGAGGGACTCTAGGTAGGAGCTGAGGAGGAGGTGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 90 bp CCACAAAGCCAGTGCCATCTACACGGTTGGGCAGTCTGTACGTGGTaGTGTGGCGTGCGGCTACATAGTCCTCCCATGAGGCATATTCAG +
Preference number: 1 (lower is better)
Translates to: PQSQCHLHGWAVCTW*CGVRLHSPPMRHIQ
Trigger: CTGAATATGCCTCATGGGAGGACTATGTAGCCGCACGCCACACCACCACGTACAGACTGCCCAACCGTGTAGATGGCACTGGCTTTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp GAGTTCTCACTGGGATACTCTTGGGGGAACACCAACTCCTGCACTTaGCCCTCCGTGTTCAGCACAGTTACCTCCAGGACCACGTTCTGC +
Preference number: 1 (lower is better)
Translates to: EFSLGYSWGNTNSCT*PSVFSTVTSRTTFC
Trigger: GCAGAACGTGGTCCTGGAGGTAACTGTGCTGAACACGGAGGGCCAAGTGCAGGAGTTGGTGTTCCCCCAAGAGTATCCCAGTGAGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR TCA 90 bp ACCACACCGTTGCGGCTGTTCTGCTTGATGGTGTTGGCGGAGAGCTaGATGGAGTTCTCACTGGGATACTCTTGGGGGAACACCAACTCC +
Preference number: 1 (lower is better)
Translates to: TTPLRLFCLMVLAES*MEFSLGYSWGNTNS
Trigger: GGAGTTGGTGTTCCCCCAAGAGTATCCCAGTGAGAACTCCATTCAGCTCTCCGCCAACACCATCAAGCAGAACAGCCGCAACGGTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 90 bp CTCACGGTTCGCATTGGTGTTGAAGGCATAGTCCACGCGGTTGCCTaGGGCCTCGCTATCATCGTCCACATAGACAGAACGCAGCACATA +
Preference number: 1 (lower is better)
Translates to: LTVRIGVEGIVHAVA*GLAIIVHIDRTQHI
Trigger: TATGTGCTGCGTTCTGTCTATGTGGACGATGATAGCGAGGCCGCAGGCAACCGCGTGGACTATGCCTTCAACACCAATGCGAACCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp AGACCACAAAGCCAGTGCCATCTACACGGTTGGGCAGTCTGTACGTaGTGGTGTGGCGTGCGGCTACATAGTCCTCCCATGAGGCATATT +
Preference number: 1 (lower is better)
Translates to: RPQSQCHLHGWAVCT*WCGVRLHSPPMRHI
Trigger: AATATGCCTCATGGGAGGACTATGTAGCCGCACGCCACACCACCACGTACAGACTGCCCAACCGTGTAGATGGCACTGGCTTTGTGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp TTCTTGCCGGCTGACTCTCGTTCAATGGGCCGTAGGGCCTGGAGCTaGGCATCCAGGATATCTAGCAGTTGTTCCATCAGCTTCACTGAG +
Preference number: 1 (lower is better)
Translates to: FLPADSRSMGRRAWS*ASRISSSCSISFTE
Trigger: CTCAGTGAAGCTGATGGAACAACTGCTAGATATCCTGGATGCCCAGCTCCAGGCCCTACGGCCCATTGAACGAGAGTCAGCCGGCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR TCA 90 bp CATAGCCTGTTTCCCAAGTGCCCTCAAAACGCAACGTGTAGGGGTTaGGCTGGCTTACCACCAAGCGCCCATTGTTGCCCTCAGTTGCAT +
Preference number: 1 (lower is better)
Translates to: HSLFPKCPQNATCRG*AGLPPSAHCCPQLH
Trigger: ATGCAACTGAGGGCAACAATGGGCGCTTGGTGGTAAGCCAGCTCAACCCCTACACGTTGCGTTTTGAGGGCACTTGGGAAACAGGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR TCA 90 bp CATGGTGGCTGTATGAACCTGTTCGGTGGCATTCATGTCTTTCCATaGCTCAAGCGCCTCCGGCCGAAGCAGGTTATCCACTGTCTCCAC +
Preference number: 1 (lower is better)
Translates to: HGGCMNLFGGIHVFP*LKRLRPKQVIHCLH
Trigger: GTGGAGACAGTGGATAACCTGCTTCGGCCGGAGGCGCTTGAGTCATGGAAAGACATGAATGCCACCGAACAGGTTCATACAGCCACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp ATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTaGTGGATGGAGAAGAGTGAGCAGCAGATAGAGTGGATCCTGCAA +
Preference number: 1 (lower is better)
Translates to: MEGSRPSVPLTPLFL*WMEKSEQQIEWILQ
Trigger: TTGCAGGATCCACTCTATCTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR CCA 90 bp CCTCCAGGACATCTAGAAGCATGGTGGCTGTATGAACCTGTTCGGTaGCATTCATGTCTTTCCATGACTCAAGCGCCTCCGGCCGAAGCA +
Preference number: 1 (lower is better)
Translates to: PPGHLEAWWLYEPVR*HSCLSMTQAPPAEA
Trigger: TGCTTCGGCCGGAGGCGCTTGAGTCATGGAAAGACATGAATGCCACCGAACAGGTTCATACAGCCACCATGCTTCTAGATGTCCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR TCA 90 bp AGGAAGGCACCCTCCTCCAGGACATCTAGAAGCATGGTGGCTGTATaGACCTGTTCGGTGGCATTCATGTCTTTCCATGACTCAAGCGCC +
Preference number: 1 (lower is better)
Translates to: RKAPSSRTSRSMVAV*TCSVAFMSFHDSSA
Trigger: GGCGCTTGAGTCATGGAAAGACATGAATGCCACCGAACAGGTTCATACAGCCACCATGCTTCTAGATGTCCTGGAGGAGGGTGCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 90 bp CAGCCAGCAGGAAGGCACCCTCCTCCAGGACATCTAGAAGCATGGTaGCTGTATGAACCTGTTCGGTGGCATTCATGTCTTTCCATGACT +
Preference number: 1 (lower is better)
Translates to: QPAGRHPPPGHLEAW*LYEPVRWHSCLSMT
Trigger: AGTCATGGAAAGACATGAATGCCACCGAACAGGTTCATACAGCCACCATGCTTCTAGATGTCCTGGAGGAGGGTGCCTTCCTGCTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR TCA 90 bp TGCAAAGAAGCTCATGGCAGCAGCAAGCTGAGACCCAAGGATGCTTaGAAACTCATGGCACTTGTGAGGAAGGAGGCAGGGAAGAGACAG +
Preference number: 1 (lower is better)
Translates to: CKEAHGSSKLRPKDA*KLMALVRKEAGKRQ
Trigger: CTGTCTCTTCCCTGCCTCCTTCCTCACAAGTGCCATGAGTTTTCAAGCATCCTTGGGTCTCAGCTTGCTGCTGCCATGAGCTTCTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 90 bp GTTGCTTCTAGATTTGTTCTGTCTCTGGAGTGTAAAAAGCTGCTCTaGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAAGTCCT +
Preference number: 1 (lower is better)
Translates to: VASRFVLSLECKKLL*RLPPRLGCTHTGSP
Trigger: AGGACTTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTACACTCCAGAGACAGAACAAATCTAGAAGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR GCA 90 bp GTCATATTTGACAATGTTGCGAGTGCGCTCCTTGTTGTAGAAGACTaGGCCATCGTAGACCACAAAGCCAGTGCCATCTACACGGTTGGG +
Preference number: 1 (lower is better)
Translates to: VIFDNVASALLVVED*AIVDHKASAIYTVG
Trigger: CCCAACCGTGTAGATGGCACTGGCTTTGTGGTCTACGATGGCGCAGTCTTCTACAACAAGGAGCGCACTCGCAACATTGTCAAATATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 90 bp CGACTAGAGTCAGGCTTGAGCACTGATGAGCTTCGGATCATCTTGTaGAGGGTCACCATGAGGAACACCAGGTTCACCACAATGACAAAC +
Preference number: 1 (lower is better)
Translates to: RLESGLSTDELRIIL*RVTMRNTRFTTMTN
Trigger: GTTTGTCATTGTGGTGAACCTGGTGTTCCTCATGGTGACCCTGCACAAGATGATCCGAAGCTCATCAGTGCTCAAGCCTGACTCTAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 90 bp TTGCTGTTGCTTCTAGATTTGTTCTGTCTCTGGAGTGTAAAAAGCTaGTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAA +
Preference number: 1 (lower is better)
Translates to: LLLLLDLFCLWSVKS*SGGSHPGWDVHIQE
Trigger: TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTACACTCCAGAGACAGAACAAATCTAGAAGCAACAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp CGAGTCCCGCAGGTTGGCCCCGCTGGCATAGAGGGAGTCCCGGCCGGGAGGGGAGTTCCGGCCTCGGGGTaGCTCGGGACCCCCATCCCC +
Preference number: 2 (lower is better)
Translates to: RVPQVGPAGIEGVPAGRGVPASG*LGTPIP
Trigger: GGGGATGGGGGTCCCGAGCCACCCCGAGGCCGGAAC...TCCCCTCCCGGCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp CGAGTCCCGCAGGTTGGCCCCGCTGGCATAGAGGGAGTCCCGGCCGGGAGGGGATGGCCCACCAGCCACTaGCTCCGTCAGTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: RVPQVGPAGIEGVPAGRGWPTSH*LRQSLL
Trigger: GAGCAGAGACTGACGGAGGCAGTGGCTGGTGGGCCA...TCCCCTCCCGGCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp CTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTAGGCAGAGGGGCACCTaGAGAGAGTGGCCCACCAGC +
Preference number: 2 (lower is better)
Translates to: LPGLAAALFRRKSGLAWARQRGT*REWPTS
Trigger: GCTGGTGGGCCACTCTCTCCAGGTGCCCCTCTGCCT...AGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAATCCCCAAGGGGGCTGTaGGGCCCACAGGCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: APAPGPGLSRGIRPSLQESPRGL*GPQAEG
Trigger: CCCCTCTGCCTGTGGGCCCCACAGCCCCCTTGGGGA...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCTCCCCAAGGGGGCTGTaGGGCCCACAGGCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSSPRGL*GPQAEG
Trigger: CCCCTCTGCCTGTGGGCCCCACAGCCCCCTTGGGGA...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCCTGGATTCCCTCCCTaGCCAGGCCTCGGGTCCATG +
Preference number: 2 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSPGFPP*PGLGSM
Trigger: CATGGACCCGAGGCCTGGCCAGGGAGGGAATCCAGG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAAGGCAGAGGGGCACCTaGAGAGAGTGGCCCACCAGC +
Preference number: 2 (lower is better)
Translates to: APAPGPGLSRGIRPSLQERQRGT*REWPTS
Trigger: GCTGGTGGGCCACTCTCTCCAGGTGCCCCTCTGCCT...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTATATGGTCACTCCAGTaGGTTAGGGGCCCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: LPGLAAALFRRKSGLAWAIWSLQ*VRGPVG
Trigger: CCCCACAGGGCCCCTAACCCACTGGAGTGACCATAT...AGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCTGGCCCACCAGCCACTaGCTCCGTCAGTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSWPTSH*LRQSLL
Trigger: GAGCAGAGACTGACGGAGGCAGTGGCTGGTGGGCCA...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CGAGTCCCGCAGGTTGGCCCCGCTGGCATAGAGGGAGTCCCGGCCGGGAGGGGAGGGAGCTTCAGAAGTTaGTCACACCTACCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: RVPQVGPAGIEGVPAGRGGSFRS*SHLPAS
Trigger: AGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCC...TCCCCTCCCGGCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGCACTCTGGGGGCTaGGGGGCAGGCTTGCTTGGG +
Preference number: 2 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPVHSGG*GAGLLG
Trigger: CCCAAGCAAGCCTGCCCCTCAGCCCCCAGAGTGCAC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR TCA 90 bp CGAGTCCCGCAGGTTGGCCCCGCTGGCATAGAGGGAGTCCCGGCCGGGAGGGGACATTCTCTCCACTCTTaGTCTTCTGGGCTACTTGGT +
Preference number: 2 (lower is better)
Translates to: RVPQVGPAGIEGVPAGRGHSLHS*SSGLLG
Trigger: ACCAAGTAGCCCAGAAGATCAAGAGTGGAGAGAATG...TCCCCTCCCGGCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp TGGTTGATGGCACCCACTGGGTGTGTGGTGAGGGGTGCCCGGCGGAGTGGAGTGGTAGATACGGTCACCTaGCTGCAGCGGGTCCTTGCA +
Preference number: 2 (lower is better)
Translates to: WLMAPTGCVVRGARRSGVVDTVT*LQRVLA
Trigger: TGCAAGGACCCGCTGCAGGCAGGTGACCGTATCTAC...CACTCCACTCCGCCGGGCACCCCTCACCACACACCCAGTGGGTGCCATCAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTATCCCCAAGGGGGCTGTaGGGCCCACAGGCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLSPRGL*GPQAEG
Trigger: CCCCTCTGCCTGTGGGCCCCACAGCCCCCTTGGGGA...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGTCCCCAAGGGGGCTGTaGGGCCCACAGGCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKSPRGL*GPQAEG
Trigger: CCCCTCTGCCTGTGGGCCCCACAGCCCCCTTGGGGA...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAATCACTCCCAGGGCCCTaGGGGCTTCTCCTCAATGCA +
Preference number: 2 (lower is better)
Translates to: APAPGPGLSRGIRPSLQESLPGP*GLLLNA
Trigger: TGCATTGAGGAGAAGCCCCCAGGGCCCTGGGAGTGA...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GGACTCCTGTGCCTGCCAGTCCCCGAGGAGCTCCTCACCCCACAGCTTCTTCCATCATTGGGTGCACTCTaGGGGCTGAGGGGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: GLLCLPVPEELLTPQLLPSLGAL*GLRGRL
Trigger: AAGCCTGCCCCTCAGCCCCCAGAGTGCACCCAATGA...TGGAAGAAGCTGTGGGGTGAGGAGCTCCTCGGGGACTGGCAGGCACAGGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CAA 90 bp TCCTCGAGTTCCCTTGGGGCAAGGTCTCTCCACCAGCATACCCTGTaGGGTAGCTGGCCACTGGACCCGCCGGACCTCTCTGGGTTCACA +
Preference number: 2 (lower is better)
Translates to: SSSSLGARSLHQHTL*GSWPLDPPDLSGFT
Trigger: TGTGAACCCAGAGAGGTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGTGGAGAGACCTTGCCCCAAGGGAACTCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGCCTCCGTCAGTCTCTaGTCCCACCAGAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGASVSL*SHQSPS
Trigger: GGAGGGGCTCTGGTGGGAGCAGAGACTGACGGAGGC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGGGGCTTCTCCTCAATaGACTCCCCTAGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEGASPQ*TPLERL
Trigger: CAGCCTCTCTAGGGGAGTGCATTGAGGAGAAGCCCC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGGAAGCCGTGTCCCTTaGTGTCTCCTTCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSGSRVP*CLLPQA
Trigger: TGCCTGTGGAAGGAGACAGCAAGGGACACGGCTTCC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAGAGGCTGGGGCTTGTaGCTGGTGGAAACCCTGTCT +
Preference number: 2 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSRGWGL*LVETLS
Trigger: AGACAGGGTTTCCACCAGCCACAAGCCCCAGCCTCT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR CAA 90 bp CCGTGTCCCTTGCTGTCTCCTTCCACAGGCAGGGAGCTTCAGAAGTaGGTCACACCTACCAGCTTCTCTCTCACTCCCAGGGCCCTGGGG +
Preference number: 2 (lower is better)
Translates to: PCPLLSPSTGRELQK*VTPTSFSLTPRALG
Trigger: CCCCAGGGCCCTGGGAGTGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAGGAGACAGCAAGGGACACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR CAA 90 bp GGCTCTGGTGGAGGCCCTTTGGCACCCCCACTGGCCCCTCGCAGGTaGTTGTGCACCAGCTCTGAGATGATCATCTTCTCAAAGGCGGCA +
Preference number: 2 (lower is better)
Translates to: GSGGGPLAPPLAPRR*LCTSSEMIIFSKAA
Trigger: TGCCGCCTTTGAGAAGATGATCATCTCAGAGCTGGTGCACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAGGGCCTCCACCAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGCCTCCGTCAGTCTCTaGTCCCACCAGAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASASVSL*SHQSPS
Trigger: GGAGGGGCTCTGGTGGGAGCAGAGACTGACGGAGGC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGCCTCCGTCAGTCTCTaGTCCCACCAGAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLASVSL*SHQSPS
Trigger: GGAGGGGCTCTGGTGGGAGCAGAGACTGACGGAGGC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCCTGGATTCCCTCCCTaGCCAGGCCTCGGGTCCATG +
Preference number: 2 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKPGFPP*PGLGSM
Trigger: CATGGACCCGAGGCCTGGCCAGGGAGGGAATCCAGG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CTGCGCCATCGTAGACCACAAAGCCAGTGCCATCTACACGGTTGGGCAGTCTGTCCTGGATTCCCTCCCTaGCCAGGCCTCGGGTCCATG +
Preference number: 2 (lower is better)
Translates to: LRHRRPQSQCHLHGWAVCPGFPP*PGLGSM
Trigger: CATGGACCCGAGGCCTGGCCAGGGAGGGAATCCAGG...ACAGACTGCCCAACCGTGTAGATGGCACTGGCTTTGTGGTCTACGATGGCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCCTGGATTCCCTCCCTaGCCAGGCCTCGGGTCCATG +
Preference number: 2 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVPGFPP*PGLGSM
Trigger: CATGGACCCGAGGCCTGGCCAGGGAGGGAATCCAGG...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACCTGGATTCCCTCCCTaGCCAGGCCTCGGGTCCATG +
Preference number: 2 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASPGFPP*PGLGSM
Trigger: CATGGACCCGAGGCCTGGCCAGGGAGGGAATCCAGG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGGCACCTGGAGAGAGTaGCCCACCAGCCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKGTWRE*PTSHCL
Trigger: GAGGCAGTGGCTGGTGGGCCACTCTCTCCAGGTGCC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAAGGCAGAGGGGCACCTaGAGAGAGTGGCCCACCAGC +
Preference number: 2 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLRQRGT*REWPTS
Trigger: GCTGGTGGGCCACTCTCTCCAGGTGCCCCTCTGCCT...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCATCCCCAAGGGGGCTGTaGGGCCCACAGGCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSSPRGL*GPQAEG
Trigger: CCCCTCTGCCTGTGGGCCCCACAGCCCCCTTGGGGA...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp TGGTTGATGGCACCCACTGGGTGTGTGGTGAGGGGTGCCCGGCGGAGTGGAGTGACCCCACTGTTCCTCTaGTGGATGGAGAAGAGTGAG +
Preference number: 2 (lower is better)
Translates to: WLMAPTGCVVRGARRSGVTPLFL*WMEKSE
Trigger: CTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGT...CACTCCACTCCGCCGGGCACCCCTCACCACACACCCAGTGGGTGCCATCAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCTTCTGCAGGGTCCCTaGGCACACGAAGACTTTCTG +
Preference number: 2 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSLLQGP*AHEDFL
Trigger: CAGAAAGTCTTCGTGTGCCCAGGGACCCTGCAGAAG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GGACTCCTGTGCCTGCCAGTCCCCGAGGAGCTCCTCACCCCACAGCTTCTTCCAAGATATCTTGTCTCCTaGCCAGTGGGGCAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: GLLCLPVPEELLTPQLLPRYLVS*PVGQGR
Trigger: TCTCCCCTGCCCCACTGGCCAGGAGACAAGATATCT...TGGAAGAAGCTGTGGGGTGAGGAGCTCCTCGGGGACTGGCAGGCACAGGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CAA 90 bp TCTGGTGGAGGCCCTTTGGCACCCCCACTGGCCCCTCGCAGGTTGTaGTGCACCAGCTCTGAGATGATCATCTTCTCAAAGGCGGCAGCA +
Preference number: 2 (lower is better)
Translates to: SGGGPLAPPLAPRRL*CTSSEMIIFSKAAA
Trigger: TGCTGCCGCCTTTGAGAAGATGATCATCTCAGAGCTGGTGCACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAGGGCCTCCACCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 90 bp CCAGTCCCCGAGGAGCTCCTCACCCCACAGCTTCTTCCAGCTTTATaGGTGTCTGATGGCCTTGGGCCTGGGCTGAGTCAAGTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: PVPEELLTPQLLPAL*VSDGLGPGLSQVLW
Trigger: CCAGAGGACTTGACTCAGCCCAGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAGCTCCTCGGGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR GCA 90 bp TGTCTTTCCATGACTCAAGCGCCTCCGGCCGAAGCAGGTTATCCACTGTCTCCAGCCTCCGTCAGTCTCTaGTCCCACCAGAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: CLSMTQAPPAEAGYPLSPASVSL*SHQSPS
Trigger: GGAGGGGCTCTGGTGGGAGCAGAGACTGACGGAGGC...TGGAGACAGTGGATAACCTGCTTCGGCCGGAGGCGCTTGAGTCATGGAAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGTGGCCCACCAGCCACTaGCTCCGTCAGTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKWPTSH*LRQSLL
Trigger: GAGCAGAGACTGACGGAGGCAGTGGCTGGTGGGCCA...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTGGCCCACCAGCCACTaGCTCCGTCAGTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVWPTSH*LRQSLL
Trigger: GAGCAGAGACTGACGGAGGCAGTGGCTGGTGGGCCA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGCTGAGGGGCAGGCTTaGTTGGGAGTCAGGGACCAA +
Preference number: 2 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGAEGQA*LGVRDQ
Trigger: TTGGTCCCTGACTCCCAAGCAAGCCTGCCCCTCAGC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACGTGGTGGTGTGGCGTaGGGCTACATAGTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQRGGVA*GYIVLP
Trigger: TGGGAGGACTATGTAGCCGCACGCCACACCACCACG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp TGTCTTTCCATGACTCAAGCGCCTCCGGCCGAAGCAGGTTATCCACTGTCTCCAAGGCAGAGGGGCACCTaGAGAGAGTGGCCCACCAGC +
Preference number: 2 (lower is better)
Translates to: CLSMTQAPPAEAGYPLSPRQRGT*REWPTS
Trigger: GCTGGTGGGCCACTCTCTCCAGGTGCCCCTCTGCCT...TGGAGACAGTGGATAACCTGCTTCGGCCGGAGGCGCTTGAGTCATGGAAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTACTAACCCTGGCACCTaGGGCCCAGGTCATAGTCCC +
Preference number: 2 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPTNPGT*GPGHSP
Trigger: GGGACTATGACCTGGGCCCCAGGTGCCAGGGTTAGT...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAACTAACCCTGGCACCTaGGGCCCAGGTCATAGTCCC +
Preference number: 2 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQTNPGT*GPGHSP
Trigger: GGGACTATGACCTGGGCCCCAGGTGCCAGGGTTAGT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCCACTGTTCCTCTGGTaGATGGAGAAGAGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSPLFLW*MEKSEQ
Trigger: CTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAACCCCACTGTTCCTCTaGTGGATGGAGAAGAGTGAG +
Preference number: 2 (lower is better)
Translates to: APAPGPGLSRGIRPSLQETPLFL*WMEKSE
Trigger: CTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGT...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAATCATTGGGTGCACTCTaGGGGCTGAGGGGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQSLGAL*GLRGRL
Trigger: AAGCCTGCCCCTCAGCCCCCAGAGTGCACCCAATGA...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTCGGGGCTTTGCTCCTaGGAGCAGACTCTGGCCGCA +
Preference number: 2 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWSGLCS*EQTLAA
Trigger: TGCGGCCAGAGTCTGCTCCCAGGAGCAAAGCCCCGA...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp TGCAGGGTCACCATGAGGAACACCAGGTTCACCACAATGACAAACGAGACGGGCACCCTGTTGGGTAGCTaGCCACTGGACCCGCCGGAC +
Preference number: 2 (lower is better)
Translates to: CRVTMRNTRFTTMTNETGTLLGS*PLDPPD
Trigger: GTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGT...GCCCGTCTCGTTTGTCATTGTGGTGAACCTGGTGTTCCTCATGGTGACCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 90 bp ACGCGGCTAGACTCCTTATTGATAGATGCTGCGATGACCTGTGAGTaGACCACCAGGGAGGCACCTCCAGGGCCACCTGTCCCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: TRLDSLLIDAAMTCE*TTREAPPGPPVPAS
Trigger: TGAGGCAGGGACAGGTGGCCCTGGAGGTGCCTCCCTGGTGGTCAACTCACAGGTCATCGCAGCATCTATCAATAAGGAGTCTAGCCGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGTGGATGGAGAAGAGTaGGCAGCAGATAGAGTGGAT +
Preference number: 2 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSVDGEE*AADRVD
Trigger: ATCCACTCTATCTGCTGCTCACTCTTCTCCATCCAC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCACCATGCACCAGACTaGTGCTCTGACTCATGTGTA +
Preference number: 2 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSHHAPD*CSDSCV
Trigger: TACACATGAGTCAGAGCATCAGTCTGGTGCATGGTG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp TGTCTTTCCATGACTCAAGCGCCTCCGGCCGAAGCAGGTTATCCACTGTCTCCACTGTGGTGGTGGTACTaGGAGGCGGGGAAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: CLSMTQAPPAEAGYPLSPLWWWY*EAGKWL
Trigger: CAGCCACTTCCCCGCCTCTCAGTACCACCACCACAG...TGGAGACAGTGGATAACCTGCTTCGGCCGGAGGCGCTTGAGTCATGGAAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGCCACTGGGTGTGTGGTaGGGGGTGCCCGGCGGAGTG +
Preference number: 2 (lower is better)
Translates to: EITASQGVAVVEVAVKWQPLGVW*GVPGGV
Trigger: CACTCCGCCGGGCACCCCTCACCACACACCCAGTGG...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGGGGCTTCTCCTCAATaGACTCCCCTAGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPGASPQ*TPLERL
Trigger: CAGCCTCTCTAGGGGAGTGCATTGAGGAGAAGCCCC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp TGCAGGGTCACCATGAGGAACACCAGGTTCACCACAATGACAAACGAGACGGGCGTCCACGCGGTTGCCTaGGGCCTCGCTATCATCGTC +
Preference number: 2 (lower is better)
Translates to: CRVTMRNTRFTTMTNETGVHAVA*GLAIIV
Trigger: GACGATGATAGCGAGGCCGCAGGCAACCGCGTGGAC...GCCCGTCTCGTTTGTCATTGTGGTGAACCTGGTGTTCCTCATGGTGACCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp TGCAGGGTCACCATGAGGAACACCAGGTTCACCACAATGACAAACGAGACGGGCGAGTGGAGTGGTGGCTaGAGGCGAGGCTGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: CRVTMRNTRFTTMTNETGEWSGG*RRGCAG
Trigger: ACCAGCACAGCCTCGCCTGCAGCCACCACTCCACTC...GCCCGTCTCGTTTGTCATTGTGGTGAACCTGGTGTTCCTCATGGTGACCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGAGGCAGAGGGGCACCTaGAGAGAGTGGCCCACCAGC +
Preference number: 2 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMRQRGT*REWPTS
Trigger: GCTGGTGGGCCACTCTCTCCAGGTGCCCCTCTGCCT...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGTCCCCAAGGGGGCTGTaGGGCCCACAGGCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: EITASQGVAVVEVAVKWQSPRGL*GPQAEG
Trigger: CCCCTCTGCCTGTGGGCCCCACAGCCCCCTTGGGGA...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAACTAACCCTGGCACCTaGGGCCCAGGTCATAGTCCC +
Preference number: 2 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASTNPGT*GPGHSP
Trigger: GGGACTATGACCTGGGCCCCAGGTGCCAGGGTTAGT...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAAACTAACCCTGGCACCTaGGGCCCAGGTCATAGTCCC +
Preference number: 2 (lower is better)
Translates to: VKSCSGGSHPGWDVHIQETNPGT*GPGHSP
Trigger: GGGACTATGACCTGGGCCCCAGGTGCCAGGGTTAGT...TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAACTAACCCTGGCACCTaGGGCCCAGGTCATAGTCCC +
Preference number: 2 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLTNPGT*GPGHSP
Trigger: GGGACTATGACCTGGGCCCCAGGTGCCAGGGTTAGT...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCAGAGGCTGGGGCTTGTaGCTGGTGGAAACCCTGTCT +
Preference number: 2 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGRGWGL*LVETLS
Trigger: AGACAGGGTTTCCACCAGCCACAAGCCCCAGCCTCT...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp TGGCCCCATCCTCTGCCGTACAGCTCTCCGACTCATCCAGATCACTCTGGTACATCACTCCCAGGGCCCTaGGGGCTTCTCCTCAATGCA +
Preference number: 2 (lower is better)
Translates to: WPHPLPYSSPTHPDHSGTSLPGP*GLLLNA
Trigger: TGCATTGAGGAGAAGCCCCCAGGGCCCTGGGAGTGA...TGTACCAGAGTGATCTGGATGAGTCGGAGAGCTGTACGGCAGAGGATGGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp TCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTGGGCTCACTCCCAGGGCCCTaGGGGCTTCTCCTCAATGCA +
Preference number: 2 (lower is better)
Translates to: SPHSFFQLYWCLMALGLGSLPGP*GLLLNA
Trigger: TGCATTGAGGAGAAGCCCCCAGGGCCCTGGGAGTGA...GCCCAGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGTCACTCCCAGGGCCCTaGGGGCTTCTCCTCAATGCA +
Preference number: 2 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKSLPGP*GLLLNA
Trigger: TGCATTGAGGAGAAGCCCCCAGGGCCCTGGGAGTGA...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGGGAGCTTCAGAAGTTaGTCACACCTACCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEGSFRS*SHLPAS
Trigger: AGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GGACTCCTGTGCCTGCCAGTCCCCGAGGAGCTCCTCACCCCACAGCTTCTTCCATGTTCCTCTGGTGGATaGAGAAGAGTGAGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: GLLCLPVPEELLTPQLLPCSSGG*RRVSSR
Trigger: TCTGCTGCTCACTCTTCTCCATCCACCAGAGGAACA...TGGAAGAAGCTGTGGGGTGAGGAGCTCCTCGGGGACTGGCAGGCACAGGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAATGTTCCTCTGGTGGATaGAGAAGAGTGAGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: APAPGPGLSRGIRPSLQECSSGG*RRVSSR
Trigger: TCTGCTGCTCACTCTTCTCCATCCACCAGAGGAACA...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGGGTTAGGGGCCCTGTaGGGAGTTGTGCTTCATCAG +
Preference number: 2 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQGLGAL*GVVLHQ
Trigger: CTGATGAAGCACAACTCCCCACAGGGCCCCTAACCC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp TCTTTGTTGATGAAGAGGAGGCCGAAAGCCCAGGTGAGGCCCAGCAGGAAGAGCTGGGCAGTCTGTACGTaGTGGTGTGGCGTGCGGCTA +
Preference number: 2 (lower is better)
Translates to: SLLMKRRPKAQVRPSRKSWAVCT*WCGVRL
Trigger: TAGCCGCACGCCACACCACCACGTACAGACTGCCCA...GCTCTTCCTGCTGGGCCTCACCTGGGCTTTCGGCCTCCTCTTCATCAACAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 90 bp AGCTCAGAAGCGGCAACCCCTACACACCTAGGGAAGCCGTGTCCCTaGCTGTCTCCTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACA +
Preference number: 2 (lower is better)
Translates to: SSEAATPTHLGKPCP*LSPSTGRELQKLVT
Trigger: TGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAGGAGACAGCAAGGGACACGGCTTCCCTAGGTGTGTAGGGGTTGCCGCTTCTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR CAA 90 bp CCCCACTTGGGGACCTGCCATGTAGCTCTGAGGCCTAGAAGCAAGTaGCTCCCTGTGCTAGTGATTCCAGCTAGGCAGAAACCATGGGCC +
Preference number: 2 (lower is better)
Translates to: PHLGTCHVALRPRSK*LPVLVIPARQKPWA
Trigger: GGCCCATGGTTTCTGCCTAGCTGGAATCACTAGCACAGGGAGCAACTTGCTTCTAGGCCTCAGAGCTACATGGCAGGTCCCCAAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR TCA 90 bp TGCAGGGTCACCATGAGGAACACCAGGTTCACCACAATGACAAACGAGACGGGCCAGTTTCCCCGCTCTTaGTGCGGGTCCGCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: CRVTMRNTRFTTMTNETGQFPRS*CGSAGH
Trigger: ATGACCTGCGGACCCGCATCAAGAGCGGGGAAACTG...GCCCGTCTCGTTTGTCATTGTGGTGAACCTGGTGTTCCTCATGGTGACCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp TCTTTGTTGATGAAGAGGAGGCCGAAAGCCCAGGTGAGGCCCAGCAGGAAGAGCTTCCATCAGCTTCACTaGGGAGGACACGTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: SLLMKRRPKAQVRPSRKSFHQLH*GGHVPS
Trigger: GCTGGGGACGTGTCCTCCTCAGTGAAGCTGATGGAA...GCTCTTCCTGCTGGGCCTCACCTGGGCTTTCGGCCTCCTCTTCATCAACAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp CACTTGGGGACCTGCCATGTAGCTCTGAGGCCTAGAAGCAAGTTGCTCCCTGTGTGGACAGAGCAGAGGTaGAAGGACCGGTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: HLGTCHVALRPRSKLLPVWTEQR*KDRCWE
Trigger: TTCCCAGCACCGGTCCTTTCACCTCTGCTCTGTCCA...CACAGGGAGCAACTTGCTTCTAGGCCTCAGAGCTACATGGCAGGTCCCCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR TCA 90 bp CATAGCCCACATTTGGAGAAGGGCTGTATAGGAAGAAAGGACGCAGGACTCCTGGCCTTGGGCCTGGGCTaGGTCAAGTCCTCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: HSPHLEKGCIGRKDAGLLALGLG*VKSSGS
Trigger: GGAGCCAGAGGACTTGACTCAGCCCAGGCCCAAGGC...CAGGAGTCCTGCGTCCTTTCTTCCTATACAGCCCTTCTCCAAATGTGGGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR GCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGCCTCCGTCAGTCTCTaGTCCCACCAGAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEASVSL*SHQSPS
Trigger: GGAGGGGCTCTGGTGGGAGCAGAGACTGACGGAGGC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGGGGCTTCTCCTCAATaGACTCCCCTAGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVGASPQ*TPLERL
Trigger: CAGCCTCTCTAGGGGAGTGCATTGAGGAGAAGCCCC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp GTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAAGGGGCTTCTCCTCAATaGACTCCCCTAGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: VKSCSGGSHPGWDVHIQEGASPQ*TPLERL
Trigger: CAGCCTCTCTAGGGGAGTGCATTGAGGAGAAGCCCC...TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGGAAGCCGTGTCCCTTaGTGTCTCCTTCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWGSRVP*CLLPQA
Trigger: TGCCTGTGGAAGGAGACAGCAAGGGACACGGCTTCC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACCTGCAGCGGGTCCTTaGACCATGCACCAGACTGAT +
Preference number: 2 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLPAAGP*TMHQTD
Trigger: ATCAGTCTGGTGCATGGTGCAAGGACCCGCTGCAGG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCAGTCAATGTGTCCGTaGGGTAGGGGATCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKQSMCP*GRGSRA
Trigger: TGCCCTGGATCCCCTACCGCACGGACACATTGACTG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp TGGCCCCATCCTCTGCCGTACAGCTCTCCGACTCATCCAGATCACTCTGGTACACCGTTGCGGCTGTTCTaGTTGATGGTGTTGGCGGAG +
Preference number: 2 (lower is better)
Translates to: WPHPLPYSSPTHPDHSGTPLRLF*LMVLAE
Trigger: CTCCGCCAACACCATCAAGCAGAACAGCCGCAACGG...TGTACCAGAGTGATCTGGATGAGTCGGAGAGCTGTACGGCAGAGGATGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp TCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTGGGCTGGAGTGTAAAAAGCTaGTCTGGCGGCTCCCACCCC +
Preference number: 2 (lower is better)
Translates to: SPHSFFQLYWCLMALGLGWSVKS*SGGSHP
Trigger: GGGGTGGGAGCCGCCAGAGCAGCTTTTTACACTCCA...GCCCAGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGGGGCTTGTGGCTGGTaGAAACCCTGTCTACTAACC +
Preference number: 2 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPGACGW*KPCLLT
Trigger: GGTTAGTAGACAGGGTTTCCACCAGCCACAAGCCCC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGGGGCTTGTGGCTGGTaGAAACCCTGTCTACTAACC +
Preference number: 2 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGGACGW*KPCLLT
Trigger: GGTTAGTAGACAGGGTTTCCACCAGCCACAAGCCCC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp TGGCCCCATCCTCTGCCGTACAGCTCTCCGACTCATCCAGATCACTCTGGTACAAGAGGCTGGGGCTTGTaGCTGGTGGAAACCCTGTCT +
Preference number: 2 (lower is better)
Translates to: WPHPLPYSSPTHPDHSGTRGWGL*LVETLS
Trigger: AGACAGGGTTTCCACCAGCCACAAGCCCCAGCCTCT...TGTACCAGAGTGATCTGGATGAGTCGGAGAGCTGTACGGCAGAGGATGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGTCACTCCCAGGGCCCTaGGGGCTTCTCCTCAATGCA +
Preference number: 2 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQSLPGP*GLLLNA
Trigger: TGCATTGAGGAGAAGCCCCCAGGGCCCTGGGAGTGA...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGATCCTGCAAGGCTTTaGCCAGCTCAGAAGCGGCAA +
Preference number: 2 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPDPARL*PAQKRQ
Trigger: TTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGATCCTGCAAGGCTTTaGCCAGCTCAGAAGCGGCAA +
Preference number: 2 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGDPARL*PAQKRQ
Trigger: TTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp ACACATACAGGAAGTCCTGGCTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAGAGCAGCAGATAGAGTaGATCCTGCAAGGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: THTGSPGCQGWPLHCSGEEQQIE*ILQGFG
Trigger: GCCAAAGCCTTGCAGGATCCACTCTATCTGCTGCTC...TTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAGCCAGGACTTCCTGTATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp TGCAGGGTCACCATGAGGAACACCAGGTTCACCACAATGACAAACGAGACGGGCCCCAGCCCCTGGGCCTaGGCTTTCTCGTGGTATAAG +
Preference number: 2 (lower is better)
Translates to: CRVTMRNTRFTTMTNETGPSPWA*AFSWYK
Trigger: CTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG...GCCCGTCTCGTTTGTCATTGTGGTGAACCTGGTGTTCCTCATGGTGACCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGAGGGGCAGGCTTGCTTaGGAGTCAGGGACCAATAGC +
Preference number: 2 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVRGRLA*ESGTNS
Trigger: GCTATTGGTCCCTGACTCCCAAGCAAGCCTGCCCCT...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp TGTCTTTCCATGACTCAAGCGCCTCCGGCCGAAGCAGGTTATCCACTGTCTCCAGGCGGGCCAGCTCACTaGCAATGTTGGCCGCATTCT +
Preference number: 2 (lower is better)
Translates to: CLSMTQAPPAEAGYPLSPGGPAH*QCWPHS
Trigger: AGAATGCGGCCAACATTGCCAGTGAGCTGGCCCGCC...TGGAGACAGTGGATAACCTGCTTCGGCCGGAGGCGCTTGAGTCATGGAAAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 90 bp ACCACGTTCTGCTTGGCAGCCAAGAAGCGAGCAGGTTCTCTGACATaGTCAGCCAGCAGGAAGGCACCCTCCTCCAGGACATCTAGAAGC +
Preference number: 2 (lower is better)
Translates to: TTFCLAAKKRAGSLT*SASRKAPSSRTSRS
Trigger: GCTTCTAGATGTCCTGGAGGAGGGTGCCTTCCTGCTGGCTGACAATGTCAGAGAACCTGCTCGCTTCTTGGCTGCCAAGCAGAACGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 90 bp GGAGTTCTCACTGGGATACTCTTGGGGGAACACCAACTCCTGCACTaGGCCCTCCGTGTTCAGCACAGTTACCTCCAGGACCACGTTCTG +
Preference number: 2 (lower is better)
Translates to: GVLTGILLGEHQLLH*ALRVQHSYLQDHVL
Trigger: CAGAACGTGGTCCTGGAGGTAACTGTGCTGAACACGGAGGGCCAAGTGCAGGAGTTGGTGTTCCCCCAAGAGTATCCCAGTGAGAACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 90 bp GATGGTGTTGGCGGAGAGCTGAATGGAGTTCTCACTGGGATACTCTaGGGGGAACACCAACTCCTGCACTTGGCCCTCCGTGTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: DGVGGELNGVLTGIL*GEHQLLHLALRVQH
Trigger: GTGCTGAACACGGAGGGCCAAGTGCAGGAGTTGGTGTTCCCCCAAGAGTATCCCAGTGAGAACTCCATTCAGCTCTCCGCCAACACCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp TGCAGGGTCACCATGAGGAACACCAGGTTCACCACAATGACAAACGAGACGGGCGCAACGTGTAGGGGTTaGGCTGGCTTACCACCAAGC +
Preference number: 2 (lower is better)
Translates to: CRVTMRNTRFTTMTNETGATCRG*AGLPPS
Trigger: GCTTGGTGGTAAGCCAGCTCAACCCCTACACGTTGC...GCCCGTCTCGTTTGTCATTGTGGTGAACCTGGTGTTCCTCATGGTGACCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp TGGCCCCATCCTCTGCCGTACAGCTCTCCGACTCATCCAGATCACTCTGGTACAAGCGAGCAGGTTCTCTaGCATTGTCAGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: WPHPLPYSSPTHPDHSGTSEQVL*HCQPAG
Trigger: TCCTGCTGGCTGACAATGTCAGAGAACCTGCTCGCT...TGTACCAGAGTGATCTGGATGAGTCGGAGAGCTGTACGGCAGAGGATGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp CTCCTCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTCCCTTTCCCCCTCATTaGTTGGGGACAAGCCAGTCC +
Preference number: 2 (lower is better)
Translates to: LLTPQLLPALLVSDGLGPPFPPH*LGTSQS
Trigger: GGACTGGCTTGTCCCCAATCAATGAGGGGGAAAGGG...AGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGGGAAGCCGTGTCCCTTaGTGTCTCCTTCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQGSRVP*CLLPQA
Trigger: TGCCTGTGGAAGGAGACAGCAAGGGACACGGCTTCC...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAACTAACCCTGGCACCTaGGGCCCAGGTCATAGTCCC +
Preference number: 2 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSTNPGT*GPGHSP
Trigger: GGGACTATGACCTGGGCCCCAGGTGCCAGGGTTAGT...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGGGGCTTGTGGCTGGTaGAAACCCTGTCTACTAACC +
Preference number: 2 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKGACGW*KPCLLT
Trigger: GGTTAGTAGACAGGGTTTCCACCAGCCACAAGCCCC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGGGGCTTGTGGCTGGTaGAAACCCTGTCTACTAACC +
Preference number: 2 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLGACGW*KPCLLT
Trigger: GGTTAGTAGACAGGGTTTCCACCAGCCACAAGCCCC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGGGGCTTGTGGCTGGTaGAAACCCTGTCTACTAACC +
Preference number: 2 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWGACGW*KPCLLT
Trigger: GGTTAGTAGACAGGGTTTCCACCAGCCACAAGCCCC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGAGAGGCTGGGGCTTGTaGCTGGTGGAAACCCTGTCT +
Preference number: 2 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQRGWGL*LVETLS
Trigger: AGACAGGGTTTCCACCAGCCACAAGCCCCAGCCTCT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGATCCTGCAAGGCTTTaGCCAGCTCAGAAGCGGCAA +
Preference number: 2 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKDPARL*PAQKRQ
Trigger: TTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGAGCAGCAGATAGAGTaGATCCTGCAAGGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPEQQIE*ILQGFG
Trigger: GCCAAAGCCTTGCAGGATCCACTCTATCTGCTGCTC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp TTGGGGCAAGGTCTCTCCACCAGCATACCCTGTTGGGTAGCTGGCCACTGGACCTGTTCCTCTGGTGGATaGAGAAGAGTGAGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: LGQGLSTSIPCWVAGHWTCSSGG*RRVSSR
Trigger: TCTGCTGCTCACTCTTCTCCATCCACCAGAGGAACA...GGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGTGGAGAGACCTTGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 90 bp CCCAGCGCCCAGGACTTGATGTTGTCAAGGCGACTAGAGTCAGGCTaGAGCACTGATGAGCTTCGGATCATCTTGTGCAGGGTCACCATG +
Preference number: 2 (lower is better)
Translates to: PSAQDLMLSRRLESG*STDELRIILCRVTM
Trigger: CATGGTGACCCTGCACAAGATGATCCGAAGCTCATCAGTGCTCAAGCCTGACTCTAGTCGCCTTGACAACATCAAGTCCTGGGCGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGTGGATGGAGAAGAGTaGGCAGCAGATAGAGTGGAT +
Preference number: 2 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGVDGEE*AADRVD
Trigger: ATCCACTCTATCTGCTGCTCACTCTTCTCCATCCAC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR TCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGCTCCACTTCATCACTaGGCACATCTTGAACCAGGT +
Preference number: 2 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPAPLHH*AHLEPG
Trigger: ACCTGGTTCAAGATGTGCTCAGTGATGAAGTGGAGC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTCAGTTGCATAGATaGCCCACAGTCCGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGPQLHR*PTVRSH
Trigger: ATGAGAACGGACTGTGGGTCATCTATGCAACTGAGG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAGGGGCTTCTCCTCAATaGACTCCCCTAGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSGASPQ*TPLERL
Trigger: CAGCCTCTCTAGGGGAGTGCATTGAGGAGAAGCCCC...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGGGGCTTCTCCTCAATaGACTCCCCTAGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMGASPQ*TPLERL
Trigger: CAGCCTCTCTAGGGGAGTGCATTGAGGAGAAGCCCC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp ATAGCCTGTTTCCCAAGTGCCCTCAAAACGCAACGTGTAGGGGTTGAGCTGGCTGAAAGTCGCAGCCTCTaGCTTCGGGGCTTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: IACFPSALKTQRVGVELAESRSL*LRGFAP
Trigger: AGGAGCAAAGCCCCGAAGGCAGAGGCTGCGACTTTC...AGCCAGCTCAACCCCTACACGTTGCGTTTTGAGGGCACTTGGGAAACAGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp ATAGCCTGTTTCCCAAGTGCCCTCAAAACGCAACGTGTAGGGGTTGAGCTGGCTATACGGTCACCTGCCTaGAGCGGGTCCTTGCACCAT +
Preference number: 2 (lower is better)
Translates to: IACFPSALKTQRVGVELAIRSPA*SGSLHH
Trigger: ATGGTGCAAGGACCCGCTGCAGGCAGGTGACCGTAT...AGCCAGCTCAACCCCTACACGTTGCGTTTTGAGGGCACTTGGGAAACAGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp CCAGATCCAGTTAAGTCAGGCAAGGGCTATGAGCCATTTCATGCTCTCTTCACAACAGGAAGTCCTGGCTaGCAGGGCTGGCCGCTGCAC +
Preference number: 2 (lower is better)
Translates to: PDPVKSGKGYEPFHALFTTGSPG*QGWPLH
Trigger: GTGCAGCGGCCAGCCCTGGCAGCCAGGACTTCCTGT...TGTGAAGAGAGCATGAAATGGCTCATAGCCCTTGCCTGACTTAACTGGATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGGGAGCTTCAGAAGTTaGTCACACCTACCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGGSFRS*SHLPAS
Trigger: AGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGAGCAGCAGATAGAGTaGATCCTGCAAGGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWEQQIE*ILQGFG
Trigger: GCCAAAGCCTTGCAGGATCCACTCTATCTGCTGCTC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCAAGGAACTGTAGCATaGAGGGATCCCGTCCATCTG +
Preference number: 2 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVQGTVA*RDPVHL
Trigger: CAGATGGACGGGATCCCTCCATGCTACAGTTCCTTG...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAACAAGGAACTGTAGCATaGAGGGATCCCGTCCATCTG +
Preference number: 2 (lower is better)
Translates to: VKSCSGGSHPGWDVHIQEQGTVA*RDPVHL
Trigger: CAGATGGACGGGATCCCTCCATGCTACAGTTCCTTG...TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACAAGGAACTGTAGCATaGAGGGATCCCGTCCATCTG +
Preference number: 2 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASQGTVA*RDPVHL
Trigger: CAGATGGACGGGATCCCTCCATGCTACAGTTCCTTG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGATAGAGCCCCGTGTGTaGCGGGCCAGCTCACTGGCA +
Preference number: 2 (lower is better)
Translates to: EITASQGVAVVEVAVKWQIEPRV*RASSLA
Trigger: TGCCAGTGAGCTGGCCCGCCACACACGGGGCTCTAT...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp TCTTTGTTGATGAAGAGGAGGCCGAAAGCCCAGGTGAGGCCCAGCAGGAAGAGCGTGGATGGAGAAGAGTaGGCAGCAGATAGAGTGGAT +
Preference number: 2 (lower is better)
Translates to: SLLMKRRPKAQVRPSRKSVDGEE*AADRVD
Trigger: ATCCACTCTATCTGCTGCTCACTCTTCTCCATCCAC...GCTCTTCCTGCTGGGCCTCACCTGGGCTTTCGGCCTCCTCTTCATCAACAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGTGGATGGAGAAGAGTaGGCAGCAGATAGAGTGGAT +
Preference number: 2 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVVDGEE*AADRVD
Trigger: ATCCACTCTATCTGCTGCTCACTCTTCTCCATCCAC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGGAAGCCGTGTCCCTTaGTGTCTCCTTCCACAGGCA +
Preference number: 2 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEGSRVP*CLLPQA
Trigger: TGCCTGTGGAAGGAGACAGCAAGGGACACGGCTTCC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR GCA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGGTGTTGCGGTCAGTCTaGAAGCCCCGCAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: EITASQGVAVVEVAVKWQVLRSV*KPRRKQ
Trigger: CTGCTTCCTGCGGGGCTTGCAGACTGACCGCAACAC...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGGGGCTTGTGGCTGGTaGAAACCCTGTCTACTAACC +
Preference number: 2 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMGACGW*KPCLLT
Trigger: GGTTAGTAGACAGGGTTTCCACCAGCCACAAGCCCC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGGGAGCTTCAGAAGTTaGTCACACCTACCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASGSFRS*SHLPAS
Trigger: AGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGGGAGCTTCAGAAGTTaGTCACACCTACCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKGSFRS*SHLPAS
Trigger: AGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTGTTCCTCTGGTGGATaGAGAAGAGTGAGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVCSSGG*RRVSSR
Trigger: TCTGCTGCTCACTCTTCTCCATCCACCAGAGGAACA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CATAGCCCACATTTGGAGAAGGGCTGTATAGGAAGAAAGGACGCAGGACTCCTGAGGGGCAGGCTTGCTTaGGAGTCAGGGACCAATAGC +
Preference number: 2 (lower is better)
Translates to: HSPHLEKGCIGRKDAGLLRGRLA*ESGTNS
Trigger: GCTATTGGTCCCTGACTCCCAAGCAAGCCTGCCCCT...CAGGAGTCCTGCGTCCTTTCTTCCTATACAGCCCTTCTCCAAATGTGGGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGATGCAGATTGGGGGCTaGAGGCCTTCGGGTACTGGG +
Preference number: 2 (lower is better)
Translates to: EITASQGVAVVEVAVKWQMQIGG*RPSGTG
Trigger: CCCAGTACCCGAAGGCCTCCAGCCCCCAATCTGCAT...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GCTTGTGCATCTTATTGTAGTTCTTGCCGGCTGACTCTCGTTCAATGGGCCGTACCCGCCGGACCTCTCTaGGTTCACAGAAGAGCTCAG +
Preference number: 2 (lower is better)
Translates to: ACASYCSSCRLTLVQWAVPAGPL*VHRRAQ
Trigger: CTGAGCTCTTCTGTGAACCCAGAGAGGTCCGGCGGG...TACGGCCCATTGAACGAGAGTCAGCCGGCAAGAACTACAATAAGATGCACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGGGAAGAGCAGTGCAATaGCACCCAGCGCCCAGGACT +
Preference number: 2 (lower is better)
Translates to: EITASQGVAVVEVAVKWQGRAVQ*HPAPRT
Trigger: AGTCCTGGGCGCTGGGTGCCATTGCACTGCTCTTCC...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp TGCAGGGTCACCATGAGGAACACCAGGTTCACCACAATGACAAACGAGACGGGCAGGAGCAGTTTGCATTaGAGTGGTTCTTGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: CRVTMRNTRFTTMTNETGRSSLH*SGSWPP
Trigger: TGGAGGCCAAGAACCACTTCAATGCAAACTGCTCCT...GCCCGTCTCGTTTGTCATTGTGGTGAACCTGGTGTTCCTCATGGTGACCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp CTCCTCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTGTTGCCACCTCTGGATaGTGGCAGCAGGATTATGAA +
Preference number: 2 (lower is better)
Translates to: LLTPQLLPALLVSDGLGPVATSG*WQQDYE
Trigger: TTCATAATCCTGCTGCCATCATCCAGAGGTGGCAAC...AGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR TCA 90 bp CTCCTCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTAGGGAAGAGACAGGATaGAGTCAGCAGAGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: LLTPQLLPALLVSDGLGPREETG*SQQRCV
Trigger: AACACACCTCTGCTGACTTCATCCTGTCTCTTCCCT...AGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCAGCAGATAGAGTaGATCCTGCAAGGCTTTGGC +
Preference number: 2 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMEQQIE*ILQGFG
Trigger: GCCAAAGCCTTGCAGGATCCACTCTATCTGCTGCTC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGCCACTGTTCCTCTGGTaGATGGAGAAGAGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMPLFLW*MEKSEQ
Trigger: CTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGG...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGACCCCACTGTTCCTCTaGTGGATGGAGAAGAGTGAG +
Preference number: 2 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMTPLFL*WMEKSE
Trigger: CTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGT...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CCTAGGCCAGCCACTCCATACAGCCACAGCAAAGTCCAGATCCAGTTAAGTCAGACCCCACTGTTCCTCTaGTGGATGGAGAAGAGTGAG +
Preference number: 2 (lower is better)
Translates to: PRPATPYSHSKVQIQLSQTPLFL*WMEKSE
Trigger: CTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGT...CTGACTTAACTGGATCTGGACTTTGCTGTGGCTGTATGGAGTGGCTGGCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp TGCAGCCATCTTGGCAAAAGCATCTTTGGGTGTGAAGATATCTTGTCTCCTGGCCCCAGCCCCTGGGCCTaGGCTTTCTCGTGGTATAAG +
Preference number: 2 (lower is better)
Translates to: CSHLGKSIFGCEDILSPGPSPWA*AFSWYK
Trigger: CTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG...GCCAGGAGACAAGATATCTTCACACCCAAAGATGCTTTTGCCAAGATGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp TGGCCCCATCCTCTGCCGTACAGCTCTCCGACTCATCCAGATCACTCTGGTACACATCTAGAAGCATGGTaGCTGTATGAACCTGTTCGG +
Preference number: 2 (lower is better)
Translates to: WPHPLPYSSPTHPDHSGTHLEAW*LYEPVR
Trigger: CCGAACAGGTTCATACAGCCACCATGCTTCTAGATG...TGTACCAGAGTGATCTGGATGAGTCGGAGAGCTGTACGGCAGAGGATGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp CATAGCCCACATTTGGAGAAGGGCTGTATAGGAAGAAAGGACGCAGGACTCCTGTTCCCCCTCATTGATTaGGGACAAGCCAGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: HSPHLEKGCIGRKDAGLLFPLID*GQASPS
Trigger: GCTGGGACTGGCTTGTCCCCAATCAATGAGGGGGAA...CAGGAGTCCTGCGTCCTTTCTTCCTATACAGCCCTTCTCCAAATGTGGGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CAA 90 bp GTAAAGATGACAGGGTCCATGAGGAAGACGCGGCTAGACTCCTTATaGATAGATGCTGCGATGACCTGTGAGTTGACCACCAGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: VKMTGSMRKTRLDSL*IDAAMTCELTTREA
Trigger: TGCCTCCCTGGTGGTCAACTCACAGGTCATCGCAGCATCTATCAATAAGGAGTCTAGCCGCGTCTTCCTCATGGACCCTGTCATCTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 90 bp AGGCGACTAGAGTCAGGCTTGAGCACTGATGAGCTTCGGATCATCTaGTGCAGGGTCACCATGAGGAACACCAGGTTCACCACAATGACA +
Preference number: 2 (lower is better)
Translates to: RRLESGLSTDELRII*CRVTMRNTRFTTMT
Trigger: TGTCATTGTGGTGAACCTGGTGTTCCTCATGGTGACCCTGCACAAGATGATCCGAAGCTCATCAGTGCTCAAGCCTGACTCTAGTCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGGGAGCTTCAGAAGTTaGTCACACCTACCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMGSFRS*SHLPAS
Trigger: AGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCCACTGTTCCTCTGGTaGATGGAGAAGAGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEPLFLW*MEKSEQ
Trigger: CTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGG...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGACCCCACTGTTCCTCTaGTGGATGGAGAAGAGTGAG +
Preference number: 2 (lower is better)
Translates to: LSRGIRPSLQEARNCSMETPLFL*WMEKSE
Trigger: CTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGT...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CCA 90 bp GAAGTGATATACAAGAAGCAGGAACTCAAAGGGATAGTGCAGCCATCTTGGCAATTGTCTCCTGGCCAGTaGGGCAGGGGAGACAGGCCT +
Preference number: 2 (lower is better)
Translates to: EVIYKKQELKGIVQPSWQLSPGQ*GRGDRP
Trigger: AGGCCTGTCTCCCCTGCCCCACTGGCCAGGAGACAA...TTGCCAAGATGGCTGCACTATCCCTTTGAGTTCCTGCTTCTTGTATATCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp CATAGCCCACATTTGGAGAAGGGCTGTATAGGAAGAAAGGACGCAGGACTCCTGATGCAAAGAAGCTCATaGCAGCAGCAAGCTGAGACC +
Preference number: 2 (lower is better)
Translates to: HSPHLEKGCIGRKDAGLLMQRSS*QQQAET
Trigger: GGTCTCAGCTTGCTGCTGCCATGAGCTTCTTTGCAT...CAGGAGTCCTGCGTCCTTTCTTCCTATACAGCCCTTCTCCAAATGTGGGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR GCA 90 bp AAGATGACAGGGTCCATGAGGAAGACGCGGCTAGACTCCTTATTGATAGATGCTAGACCACAAAGCCAGTaGCATCTACACGGTTGGGCA +
Preference number: 2 (lower is better)
Translates to: KMTGSMRKTRLDSLLIDARPQSQ*HLHGWA
Trigger: TGCCCAACCGTGTAGATGGCACTGGCTTTGTGGTCT...AGCATCTATCAATAAGGAGTCTAGCCGCGTCTTCCTCATGGACCCTGTCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp AAGATGACAGGGTCCATGAGGAAGACGCGGCTAGACTCCTTATTGATAGATGCTCAAGGAACTGTAGCATaGAGGGATCCCGTCCATCTG +
Preference number: 2 (lower is better)
Translates to: KMTGSMRKTRLDSLLIDAQGTVA*RDPVHL
Trigger: CAGATGGACGGGATCCCTCCATGCTACAGTTCCTTG...AGCATCTATCAATAAGGAGTCTAGCCGCGTCTTCCTCATGGACCCTGTCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR TCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGTACATAGTCCTCCCATaGGGCATATTCAGTCAATGT +
Preference number: 2 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMYIVLP*GIFSQC
Trigger: ACATTGACTGAATATGCCTCATGGGAGGACTATGTA...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR GCA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGGCTGTTGATGTCACCTaGCATAAAGGAGGACTCTGT +
Preference number: 2 (lower is better)
Translates to: EITASQGVAVVEVAVKWQAVDVT*HKGGLC
Trigger: ACAGAGTCCTCCTTTATGGCAGGTGACATCAACAGC...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CCA 90 bp GAAGTGATATACAAGAAGCAGGAACTCAAAGGGATAGTGCAGCCATCTTGGCAACCCAGCCCACAGGACTaGGAACTGCCCAAATATGGT +
Preference number: 2 (lower is better)
Translates to: EVIYKKQELKGIVQPSWQPSPQD*ELPKYG
Trigger: ACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTGGG...TTGCCAAGATGGCTGCACTATCCCTTTGAGTTCCTGCTTCTTGTATATCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CAA 90 bp AGCAGAGGTGAAAGGACCGGTGCTGGGAAGGACAGGTTCTTTGTTTaGCTGTTGCTTCTAGATTTGTTCTGTCTCTGGAGTGTAAAAAGC +
Preference number: 2 (lower is better)
Translates to: SRGERTGAGKDRFFV*LLLLDLFCLWSVKS
Trigger: GCTTTTTACACTCCAGAGACAGAACAAATCTAGAAGCAACAGCAAAACAAAGAACCTGTCCTTCCCAGCACCGGTCCTTTCACCTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CCA 90 bp ACTACACTACAGCCTGCCCTCCATAGCCCACATTTGGAGAAGGGCTGTATAGGAGAAGAAAACCAGAGATaGAATAAACCCTGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: TTLQPALHSPHLEKGCIGEENQR*NKPCLF
Trigger: GAAAAGGCAGGGTTTATTCCATCTCTGGTTTTCTTC...TCCTATACAGCCCTTCTCCAAATGTGGGCTATGGAGGGCAGGCTGTAGTGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CAA 90 bp AGTGATATACAAGAAGCAGGAACTCAAAGGGATAGTGCAGCCATCTaGGCAAAAGCATCTTTGGGTGTGAAGATATCTTGTCTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: SDIQEAGTQRDSAAI*AKASLGVKISCLLA
Trigger: GGCCAGGAGACAAGATATCTTCACACCCAAAGATGCTTTTGCCAAGATGGCTGCACTATCCCTTTGAGTTCCTGCTTCTTGTATATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 72 bp CCGGGTAGGAGGGCGAGTCCCGCAGGTTGGCCCCGCTaGCATAGAGGGAGTCCCGGCCGGGAGGGGAGGAGA +
Preference number: 3 (lower is better)
Translates to: PGRRASPAGWPR*HRGSPGREGRR
Trigger: TCTCCTCCCCTCCCGGCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCGCCCTCCTACCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp GGCTGCTGTCCGGGTAGGAGGGCGAGTCCCGCAGGTTaGCCCCGCTGGCATAGAGGGAGTCCCGGCCGGGAG +
Preference number: 3 (lower is better)
Translates to: GCCPGRRASPAG*PRWHRGSPGRE
Trigger: CTCCCGGCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCGCCCTCCTACCCGGACAGCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp TCCACCGGCCTCGTCCTCACTGACCCCTGGCACAGGTaGCACAGGTGGCTCTGGTGGAGGCCCTTTGGCACC +
Preference number: 3 (lower is better)
Translates to: STGLVLTDPWHR*HRWLWWRPFGT
Trigger: GGTGCCAAAGGGCCTCCACCAGAGCCACCTGTGCCACCTGTGCCAGGGGTCAGTGAGGACGAGGCCGGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp TCTGCTCCCACCAGAGCCCCTCCTGGATTCCCTCCCTaGCCAGGCCTCGGGTCCATGAGGCCCCTCAGAGAC +
Preference number: 3 (lower is better)
Translates to: SAPTRAPPGFPP*PGLGSMRPLRD
Trigger: GTCTCTGAGGGGCCTCATGGACCCGAGGCCTGGCCAGGGAGGGAATCCAGGAGGGGCTCTGGTGGGAGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp CACATACAGGAAGTCCTGGCTGCCAGGGCTGGCCGCTaGACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: HIQEVLAARAGR*TVPEKVRAGLG
Trigger: GCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAGCCAGGACTTCCTGTATGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 72 bp AGGCAGGTCAGGTCCCAGCTGGTTGATGGCACCCACTaGGTGTGTGGTGAGGGGTGCCCGGCGGAGTGGAGT +
Preference number: 3 (lower is better)
Translates to: RQVRSQLVDGTH*VCGEGCPAEWS
Trigger: ACTCCACTCCGCCGGGCACCCCTCACCACACACCCAGTGGGTGCCATCAACCAGCTGGGACCTGACCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp GCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTaGGCTGCAGGTGCCCGGTGGCTTCAAGTGATGAGA +
Preference number: 3 (lower is better)
Translates to: AAALFRRKSGLA*AAGARWLQVMR
Trigger: TCTCATCACTTGAAGCCACCGGGCACCTGCAGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 72 bp GGAGGAGACCAAGACCCTTCTCTGTACCGTCCCCGCTaGGGTGGGGGCGTCAAGGCACCAGGTCTGGTTAGG +
Preference number: 3 (lower is better)
Translates to: GGDQDPSLYRPR*GGGVKAPGLVR
Trigger: CCTAACCAGACCTGGTGCCTTGACGCCCCCACCCCAGCGGGGACGGTACAGAGAAGGGTCTTGGTCTCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CAA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGGGAAGCCGTGTCCCTaGCTGTCTCCTTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEGKPCP*LSPSTG
Trigger: GCCTGTGGAAGGAGACAGCAAGGGACACGGCTTCCC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CAA 90 bp TGGTTGATGGCACCCACTGGGTGTGTGGTGAGGGGTGCCCGGCGGAGTGGAGTGGGGCCCTGTGGGGAGTaGTGCTTCATCAGGAGTCAC +
Preference number: 3 (lower is better)
Translates to: WLMAPTGCVVRGARRSGVGPCGE*CFIRSH
Trigger: GTGACTCCTGATGAAGCACAACTCCCCACAGGGCCC...CACTCCACTCCGCCGGGCACCCCTCACCACACACCCAGTGGGTGCCATCAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp CGAGTCCCGCAGGTTGGCCCCGCTGGCATAGAGGGAGTCCCGGCCGGGAGGGGAAAGGAGCAGTTTGCATaGAAGTGGTTCTTGGCCTCC +
Preference number: 3 (lower is better)
Translates to: RVPQVGPAGIEGVPAGRGKEQFA*KWFLAS
Trigger: GGAGGCCAAGAACCACTTCAATGCAAACTGCTCCTT...TCCCCTCCCGGCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp CGGCTCCTCCAGGGCCTTGTAGAGAAGTTCAATCTCTaGCCGGTCAGCACTCCCTGGTCCACCGGCCTCGTC +
Preference number: 3 (lower is better)
Translates to: RLLQGLVEKFNL*PVSTPWSTGLV
Trigger: GACGAGGCCGGTGGACCAGGGAGTGCTGACCGGGCAGAGATTGAACTTCTCTACAAGGCCCTGGAGGAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp GCCGAAAGCCCAGGTGAGGCCCAGCAGGAAGAGCAGTaGAATGGCACCCAGCGCCCAGGACTTGATGTTGTC +
Preference number: 3 (lower is better)
Translates to: AESPGEAQQEEQ*NGTQRPGLDVV
Trigger: GACAACATCAAGTCCTGGGCGCTGGGTGCCATTGCACTGCTCTTCCTGCTGGGCCTCACCTGGGCTTTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp ACAGAAGAGCTCAGGGGACACATGCAGATTGGGGGCTaGAGGCCTTCGGGTACTGGGTGCTGGAGCTGTGGC +
Preference number: 3 (lower is better)
Translates to: TEELRGHMQIGG*RPSGTGCWSCG
Trigger: GCCACAGCTCCAGCACCCAGTACCCGAAGGCCTCCAGCCCCCAATCTGCATGTGTCCCCTGAGCTCTTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp CTCTCCACCAGCATACCCTGTTGGGTAGCTGGCCACTaGACCCGCCGGACCTCTCTGGGTTCACAGAAGAGC +
Preference number: 3 (lower is better)
Translates to: LSTSIPCWVAGH*TRRTSLGSQKS
Trigger: GCTCTTCTGTGAACCCAGAGAGGTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGTGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp GCAAGGTCTCTCCACCAGCATACCCTGTTGGGTAGCTaGCCACTGGACCCGCCGGACCTCTCTGGGTTCACA +
Preference number: 3 (lower is better)
Translates to: ARSLHQHTLLGS*PLDPPDLSGFT
Trigger: TGTGAACCCAGAGAGGTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGTGGAGAGACCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp GGATGTACACATACAGGAAGTCCTGGCTGCCAGGGCTaGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: GCTHTGSPGCQG*PLHCSGESPGW
Trigger: CCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAGCCAGGACTTCCTGTATGTGTACATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CAA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGGGAAGCCGTGTCCCTaGCTGTCTCCTTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPGKPCP*LSPSTG
Trigger: GCCTGTGGAAGGAGACAGCAAGGGACACGGCTTCCC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR GCA 72 bp CAGTGCCGTAGCTTCGGTAGTCAATGGCTGCTGCGATaGCGACCACCAGGGCTGGGAAGCAGTAGCCACCTA +
Preference number: 3 (lower is better)
Translates to: QCRSFGSQWLLR*RPPGLGSSSHL
Trigger: TAGGTGGCTACTGCTTCCCAGCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCTACGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp AAGGGCTGTATAGGAAGAAAGGACGCAGGACTCCTGTaGCTGCCAGTCCCCGAGGAGCTCCTCACCCCACAG +
Preference number: 3 (lower is better)
Translates to: KGCIGRKDAGLL*LPVPEELLTPQ
Trigger: CTGTGGGGTGAGGAGCTCCTCGGGGACTGGCAGGCACAGGAGTCCTGCGTCCTTTCTTCCTATACAGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 72 bp AGCAGGCCTTTTCAGTGCCGTAGCTTCGGTAGTCAATaGCTGCTGCGATGCCGACCACCAGGGCTGGGAAGC +
Preference number: 3 (lower is better)
Translates to: SRPFQCRSFGSQ*LLRCRPPGLGS
Trigger: GCTTCCCAGCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCTACGGCACTGAAAAGGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp CTTGGGTTCCCTGTAGCTTCCTGGGGAGTTGAAGACTaGGGGCGAGGAGGGATTGAAGCCCACGGACTCTGC +
Preference number: 3 (lower is better)
Translates to: LGFPVASWGVED*GRGGIEAHGLC
Trigger: GCAGAGTCCGTGGGCTTCAATCCCTCCTCGCCCCCAGTCTTCAACTCCCCAGGAAGCTACAGGGAACCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGGGAAGCCGTGTCCCTaGCTGTCTCCTTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKGKPCP*LSPSTG
Trigger: GCCTGTGGAAGGAGACAGCAAGGGACACGGCTTCCC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CAA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGGGCCCTGTGGGGAGTaGTGCTTCATCAGGAGTCAC +
Preference number: 3 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQGPCGE*CFIRSH
Trigger: GTGACTCCTGATGAAGCACAACTCCCCACAGGGCCC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR GCA 72 bp CTTTTCAGTGCCGTAGCTTCGGTAGTCAATGGCTGCTaGGATGCCGACCACCAGGGCTGGGAAGCAGTAGCC +
Preference number: 3 (lower is better)
Translates to: LFSAVASVVNGC*DADHQGWEAVA
Trigger: GGCTACTGCTTCCCAGCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCTACGGCACTGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp GGCCTTTTCAGTGCCGTAGCTTCGGTAGTCAATGGCTaGTGCGATGCCGACCACCAGGGCTGGGAAGCAGTA +
Preference number: 3 (lower is better)
Translates to: GLFSAVASVVNG*CDADHQGWEAV
Trigger: TACTGCTTCCCAGCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCTACGGCACTGAAAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp GACTGGGGGCGAGGAGGGATTGAAGCCCACGGACTCTaGAATGAGTGTATTGTATGGGCTAGTGCCCCCACG +
Preference number: 3 (lower is better)
Translates to: DWGRGGIEAHGL*NECIVWASAPT
Trigger: CGTGGGGGCACTAGCCCATACAATACACTCATTGCAGAGTCCGTGGGCTTCAATCCCTCCTCGCCCCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp TGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTaGAGGTGCCCGGTGGCTTCAAGTGATGAGATTTTC +
Preference number: 3 (lower is better)
Translates to: CTVPEKVRAGLG*RCPVASSDEIF
Trigger: GAAAATCTCATCACTTGAAGCCACCGGGCACCTGCAGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 72 bp TTGGGTGCACTCTGGGGGCTGAGGGGCAGGCTTGCTTaGGAGTCAGGGACCAATAGCAAAGGAGAAAGGAGC +
Preference number: 3 (lower is better)
Translates to: LGALWGLRGRLA*ESGTNSKGERS
Trigger: GCTCCTTTCTCCTTTGCTATTGGTCCCTGACTCCCAAGCAAGCCTGCCCCTCAGCCCCCAGAGTGCACCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR CCA 72 bp ATAGCCCAGCCCACAGGACTGGGAACTGCCCAAATATaGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: IAQPTGLGTAQI*SLQWVRGPVGS
Trigger: ACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR CCA 72 bp CAGTGCCATCTACACGGTTGGGCAGTCTGTACGTGGTaGTGTGGCGTGCGGCTACATAGTCCTCCCATGAGG +
Preference number: 3 (lower is better)
Translates to: QCHLHGWAVCTW*CGVRLHSPPMR
Trigger: CCTCATGGGAGGACTATGTAGCCGCACGCCACACCACCACGTACAGACTGCCCAACCGTGTAGATGGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp AGCCAGTGCCATCTACACGGTTGGGCAGTCTGTACGTaGTGGTGTGGCGTGCGGCTACATAGTCCTCCCATG +
Preference number: 3 (lower is better)
Translates to: SQCHLHGWAVCT*WCGVRLHSPPM
Trigger: CATGGGAGGACTATGTAGCCGCACGCCACACCACCACGTACAGACTGCCCAACCGTGTAGATGGCACTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp AGTGTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTaGGATGTACACATACAGGAAGTCCTGGCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: SVKSCSGGSHPG*DVHIQEVLAAR
Trigger: CCTGGCAGCCAGGACTTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CAA 90 bp GTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAAGGGCCCTGTGGGGAGTaGTGCTTCATCAGGAGTCAC +
Preference number: 3 (lower is better)
Translates to: VKSCSGGSHPGWDVHIQEGPCGE*CFIRSH
Trigger: GTGACTCCTGATGAAGCACAACTCCCCACAGGGCCC...TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR TCA 72 bp CGTGGTGGTGTGGCGTGCGGCTACATAGTCCTCCCATaGGGCATATTCAGTCAATGTGTCCGTGCGGTAGGG +
Preference number: 3 (lower is better)
Translates to: RGGVACGYIVLP*GIFSQCVRAVG
Trigger: CCCTACCGCACGGACACATTGACTGAATATGCCTCATGGGAGGACTATGTAGCCGCACGCCACACCACCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp CCTTTGGCACCCCCACTGGCCCCTCGCAGGTTGTTGTaGACCAGCTCTGAGATGATCATCTTCTCAAAGGCG +
Preference number: 3 (lower is better)
Translates to: PLAPPLAPRRLL*TSSEMIIFSKA
Trigger: CGCCTTTGAGAAGATGATCATCTCAGAGCTGGTGCACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp CCTCCTCAGCTCCTACCTAGAGTCCCTCCCCCACAATaGAAAGAAGCTCATGGCAGCAGCAAGCTGAGACCC +
Preference number: 3 (lower is better)
Translates to: PPQLLPRVPPPQ*KEAHGSSKLRP
Trigger: GGGTCTCAGCTTGCTGCTGCCATGAGCTTCTTTGCATTGTGGGGGAGGGACTCTAGGTAGGAGCTGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 72 bp CATCGTAGACCACAAAGCCAGTGCCATCTACACGGTTaGGCAGTCTGTACGTGGTGGTGTGGCGTGCGGCTA +
Preference number: 3 (lower is better)
Translates to: HRRPQSQCHLHG*AVCTWWCGVRL
Trigger: TAGCCGCACGCCACACCACCACGTACAGACTGCCCAACCGTGTAGATGGCACTGGCTTTGTGGTCTACGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp TTGCCGGCTGACTCTCGTTCAATGGGCCGTAGGGCCTaGAGCTGGGCATCCAGGATATCTAGCAGTTGTTCC +
Preference number: 3 (lower is better)
Translates to: LPADSRSMGRRA*SWASRISSSCS
Trigger: GGAACAACTGCTAGATATCCTGGATGCCCAGCTCCAGGCCCTACGGCCCATTGAACGAGAGTCAGCCGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp CTGGGATACTCTTGGGGGAACACCAACTCCTGCACTTaGCCCTCCGTGTTCAGCACAGTTACCTCCAGGACC +
Preference number: 3 (lower is better)
Translates to: LGYSWGNTNSCT*PSVFSTVTSRT
Trigger: GGTCCTGGAGGTAACTGTGCTGAACACGGAGGGCCAAGTGCAGGAGTTGGTGTTCCCCCAAGAGTATCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCATCTGCCTTCGGGGCTTaGCTCCTGGGAGCAGACTCT +
Preference number: 3 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSSAFGA*LLGADS
Trigger: AGAGTCTGCTCCCAGGAGCAAAGCCCCGAAGGCAGA...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp CGCATTGGTGTTGAAGGCATAGTCCACGCGGTTGCCTaGGGCCTCGCTATCATCGTCCACATAGACAGAACG +
Preference number: 3 (lower is better)
Translates to: RIGVEGIVHAVA*GLAIIVHIDRT
Trigger: CGTTCTGTCTATGTGGACGATGATAGCGAGGCCGCAGGCAACCGCGTGGACTATGCCTTCAACACCAATGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp GGGAGCGGATGCAGCAGTAGGAGTGACGCAGGCACTTaGTGTACTCCTTGTGCACCTTTTTCTGTAAGGCGC +
Preference number: 3 (lower is better)
Translates to: GSGCSSRSDAGT*CTPCAPFSVRR
Trigger: GCGCCTTACAGAAAAAGGTGCACAAGGAGTACAGCAAGTGCCTGCGTCACTCCTACTGCTGCATCCGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp GCTGACTCTCGTTCAATGGGCCGTAGGGCCTGGAGCTaGGCATCCAGGATATCTAGCAGTTGTTCCATCAGC +
Preference number: 3 (lower is better)
Translates to: ADSRSMGRRAWS*ASRISSSCSIS
Trigger: GCTGATGGAACAACTGCTAGATATCCTGGATGCCCAGCTCCAGGCCCTACGGCCCATTGAACGAGAGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp AGCTCCGCAAGGAAGAGGTTGATGCACAGATTCTTGTaGATGGTGTTGCGGTCAGTCTGCAAGCCCCGCAGG +
Preference number: 3 (lower is better)
Translates to: SSARKRLMHRFL*MVLRSVCKPRR
Trigger: CCTGCGGGGCTTGCAGACTGACCGCAACACCATCCACAAGAATCTGTGCATCAACCTCTTCCTTGCGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGGGGAAGCCGTGTCCCTaGCTGTCTCCTTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: EITASQGVAVVEVAVKWQGKPCP*LSPSTG
Trigger: GCCTGTGGAAGGAGACAGCAAGGGACACGGCTTCCC...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGGATCCTGCAAGGCTTaGGCCAGCTCAGAAGCGGCA +
Preference number: 3 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEGSCKA*ASSEAA
Trigger: TGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR TCA 72 bp CTGGGCACACGAAGACTTTCTGCTCCACTTCATCACTaGGCACATCTTGAACCAGGTTCGGGACTGGGCGCT +
Preference number: 3 (lower is better)
Translates to: LGTRRLSAPLHH*AHLEPGSGLGA
Trigger: AGCGCCCAGTCCCGAACCTGGTTCAAGATGTGCTCAGTGATGAAGTGGAGCAGAAAGTCTTCGTGTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR TCA 72 bp TTTCCCAAGTGCCCTCAAAACGCAACGTGTAGGGGTTaGGCTGGCTTACCACCAAGCGCCCATTGTTGCCCT +
Preference number: 3 (lower is better)
Translates to: FPKCPQNATCRG*AGLPPSAHCCP
Trigger: AGGGCAACAATGGGCGCTTGGTGGTAAGCCAGCTCAACCCCTACACGTTGCGTTTTGAGGGCACTTGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp TTCTCACTGGGATACTCTTGGGGGAACACCAACTCCTaGACTTGGCCCTCCGTGTTCAGCACAGTTACCTCC +
Preference number: 3 (lower is better)
Translates to: FSLGYSWGNTNS*TWPSVFSTVTS
Trigger: GGAGGTAACTGTGCTGAACACGGAGGGCCAAGTGCAGGAGTTGGTGTTCCCCCAAGAGTATCCCAGTGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp AGTAGTTATCCACCCTCAGCCAGCAGGCCTTTTCAGTaGCGTAGCTTCGGTAGTCAATGGCTGCTGCGATGC +
Preference number: 3 (lower is better)
Translates to: SSYPPSASRPFQ*RSFGSQWLLRC
Trigger: GCATCGCAGCAGCCATTGACTACCGAAGCTACGGCACTGAAAAGGCCTGCTGGCTGAGGGTGGATAACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp ACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTaGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCATCA +
Preference number: 3 (lower is better)
Translates to: TGLGTAQIWSLQ*VRGPVGSCASS
Trigger: TGATGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR-3UTR CAA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGTCAGGTCCCAGCTGGTaGATGGCACCCACTGGGTGT +
Preference number: 3 (lower is better)
Translates to: EITASQGVAVVEVAVKWQSGPSW*MAPTGC
Trigger: ACACCCAGTGGGTGCCATCAACCAGCTGGGACCTGA...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGGCGATGACCTGTGAGTaGACCACCAGGGAGGCACCT +
Preference number: 3 (lower is better)
Translates to: EITASQGVAVVEVAVKWQAMTCE*TTREAP
Trigger: AGGTGCCTCCCTGGTGGTCAACTCACAGGTCATCGC...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR TCA 72 bp TTGCGGCTGTTCTGCTTGATGGTGTTGGCGGAGAGCTaGATGGAGTTCTCACTGGGATACTCTTGGGGGAAC +
Preference number: 3 (lower is better)
Translates to: LRLFCLMVLAES*MEFSLGYSWGN
Trigger: GTTCCCCCAAGAGTATCCCAGTGAGAACTCCATTCAGCTCTCCGCCAACACCATCAAGCAGAACAGCCGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp CTTCTAGATTTGTTCTGTCTCTGGAGTGTAAAAAGCTaGTCTGGCGGCTCCCACCCCGGCTGGGATGTACAC +
Preference number: 3 (lower is better)
Translates to: LLDLFCLWSVKS*SGGSHPGWDVH
Trigger: GTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTACACTCCAGAGACAGAACAAATCTAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 72 bp GCAGGAAGGCACCCTCCTCCAGGACATCTAGAAGCATaGTGGCTGTATGAACCTGTTCGGTGGCATTCATGT +
Preference number: 3 (lower is better)
Translates to: AGRHPPPGHLEA*WLYEPVRWHSC
Trigger: ACATGAATGCCACCGAACAGGTTCATACAGCCACCATGCTTCTAGATGTCCTGGAGGAGGGTGCCTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp GGGCTGGGAAGCAGTAGCCACCTAGGTAATAGTACTTaGTGCGTGAATACTCGCTCTCGAACACCTCCACCA +
Preference number: 3 (lower is better)
Translates to: GLGSSSHLGNST*CVNTRSRTPPP
Trigger: TGGTGGAGGTGTTCGAGAGCGAGTATTCACGCACCAAGTACTATTACCTAGGTGGCTACTGCTTCCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGTTGCGGCTGTTCTGCTaGATGGTGTTGGCGGAGAGC +
Preference number: 3 (lower is better)
Translates to: EITASQGVAVVEVAVKWQLRLFC*MVLAES
Trigger: GCTCTCCGCCAACACCATCAAGCAGAACAGCCGCAA...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR TCA 72 bp TGTATGAACCTGTTCGGTGGCATTCATGTCTTTCCATaGCTCAAGCGCCTCCGGCCGAAGCAGGTTATCCAC +
Preference number: 3 (lower is better)
Translates to: CMNLFGGIHVFP*LKRLRPKQVIH
Trigger: GTGGATAACCTGCTTCGGCCGGAGGCGCTTGAGTCATGGAAAGACATGAATGCCACCGAACAGGTTCATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR TCA 72 bp AGACAACTTTCACCACACCGTTGCGGCTGTTCTGCTTaGTGGTGTTGGCGGAGAGCTGAATGGAGTTCTCAC +
Preference number: 3 (lower is better)
Translates to: RQLSPHRCGCSA*WCWRRAEWSSH
Trigger: GTGAGAACTCCATTCAGCTCTCCGCCAACACCATCAAGCAGAACAGCCGCAACGGTGTGGTGAAAGTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp GACAATGTTGCGAGTGCGCTCCTTGTTGTAGAAGACTaGGCCATCGTAGACCACAAAGCCAGTGCCATCTAC +
Preference number: 3 (lower is better)
Translates to: DNVASALLVVED*AIVDHKASAIY
Trigger: GTAGATGGCACTGGCTTTGTGGTCTACGATGGCGCAGTCTTCTACAACAAGGAGCGCACTCGCAACATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp AGGTTCTCTCTCGCTTGTGCATCTTATTGTAGTTCTTaGCGGCTGACTCTCGTTCAATGGGCCGTAGGGCCT +
Preference number: 3 (lower is better)
Translates to: RFSLACASYCSS*RLTLVQWAVGP
Trigger: AGGCCCTACGGCCCATTGAACGAGAGTCAGCCGGCAAGAACTACAATAAGATGCACAAGCGAGAGAGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp TCAGGCTTGAGCACTGATGAGCTTCGGATCATCTTGTaGAGGGTCACCATGAGGAACACCAGGTTCACCACA +
Preference number: 3 (lower is better)
Translates to: SGLSTDELRIIL*RVTMRNTRFTT
Trigger: TGTGGTGAACCTGGTGTTCCTCATGGTGACCCTGCACAAGATGATCCGAAGCTCATCAGTGCTCAAGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR GCA 72 bp AGAAGCTCATGGCAGCAGCAAGCTGAGACCCAAGGATaGTTGAAAACTCATGGCACTTGTGAGGAAGGAGGC +
Preference number: 3 (lower is better)
Translates to: RSSWQQQAETQG*LKTHGTCEEGG
Trigger: GCCTCCTTCCTCACAAGTGCCATGAGTTTTCAAGCATCCTTGGGTCTCAGCTTGCTGCTGCCATGAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CCA 72 bp GGAAGGCACCCTCCTCCAGGACATCTAGAAGCATGGTaGCTGTATGAACCTGTTCGGTGGCATTCATGTCTT +
Preference number: 3 (lower is better)
Translates to: GRHPPPGHLEAW*LYEPVRWHSCL
Trigger: AAGACATGAATGCCACCGAACAGGTTCATACAGCCACCATGCTTCTAGATGTCCTGGAGGAGGGTGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp AGATTTGTTCTGTCTCTGGAGTGTAAAAAGCTGCTCTaGCGGCTCCCACCCCGGCTGGGATGTACACATACA +
Preference number: 3 (lower is better)
Translates to: RFVLSLECKKLL*RLPPRLGCTHT
Trigger: TGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTACACTCCAGAGACAGAACAAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CAA 90 bp AAGATGACAGGGTCCATGAGGAAGACGCGGCTAGACTCCTTATTGATAGATGCTCACACCATGAAGGCATaGGAGGCCGAGCGCTTGTCA +
Preference number: 3 (lower is better)
Translates to: KMTGSMRKTRLDSLLIDAHTMKA*EAERLS
Trigger: TGACAAGCGCTCGGCCTCCAATGCCTTCATGGTGTG...AGCATCTATCAATAAGGAGTCTAGCCGCGTCTTCCTCATGGACCCTGTCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp GAAATCACCGCTTCGCAAGGAGTAGCTGTTGTTGAAGTTGCCGTTAAGTGGCAGCGACTAGAGTCAGGCTaGAGCACTGATGAGCTTCGG +
Preference number: 3 (lower is better)
Translates to: EITASQGVAVVEVAVKWQRLESG*STDELR
Trigger: CCGAAGCTCATCAGTGCTCAAGCCTGACTCTAGTCG...CTGCCACTTAACGGCAACTTCAACAACAGCTACTCCTTGCGAAGCGGTGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp CCTAGGCCAGCCACTCCATACAGCCACAGCAAAGTCCAGATCCAGTTAAGTCAGGATAGTGCAGCCATCTaGGCAAAAGCATCTTTGGGT +
Preference number: 3 (lower is better)
Translates to: PRPATPYSHSKVQIQLSQDSAAI*AKASLG
Trigger: ACCCAAAGATGCTTTTGCCAAGATGGCTGCACTATC...CTGACTTAACTGGATCTGGACTTTGCTGTGGCTGTATGGAGTGGCTGGCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR TCA 72 bp CCCTCCTCCAGGACATCTAGAAGCATGGTGGCTGTATaGACCTGTTCGGTGGCATTCATGTCTTTCCATGAC +
Preference number: 3 (lower is better)
Translates to: PSSRTSRSMVAV*TCSVAFMSFHD
Trigger: GTCATGGAAAGACATGAATGCCACCGAACAGGTTCATACAGCCACCATGCTTCTAGATGTCCTGGAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR TCA 72 bp CCGTGGACAAGAAGAGGCCCAGGTTGTTGTAGAGAATaGAGACAACTTTCACCACACCGTTGCGGCTGTTCT +
Preference number: 3 (lower is better)
Translates to: PWTRRGPGCCRE*RQLSPHRCGCS
Trigger: AGAACAGCCGCAACGGTGTGGTGAAAGTTGTCTTCATTCTCTACAACAACCTGGGCCTCTTCTTGTCCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CCA 72 bp CATCTAGAAGCATGGTGGCTGTATGAACCTGTTCGGTaGCATTCATGTCTTTCCATGACTCAAGCGCCTCCG +
Preference number: 3 (lower is better)
Translates to: HLEAWWLYEPVR*HSCLSMTQAPP
Trigger: CGGAGGCGCTTGAGTCATGGAAAGACATGAATGCCACCGAACAGGTTCATACAGCCACCATGCTTCTAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp GCTTGTGCATCTTATTGTAGTTCTTGCCGGCTGACTCTCGTTCAATGGGCCGTAGCATTCTCTCCACTCTaGATCTTCTGGGCTACTTGG +
Preference number: 3 (lower is better)
Translates to: ACASYCSSCRLTLVQWAVAFSPL*IFWATW
Trigger: CCAAGTAGCCCAGAAGATCAAGAGTGGAGAGAATGC...TACGGCCCATTGAACGAGAGTCAGCCGGCAAGAACTACAATAAGATGCACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR-3UTR CAA 90 bp CCAGATCCAGTTAAGTCAGGCAAGGGCTATGAGCCATTTCATGCTCTCTTCACAGAGACCCAAGGATGCTaGAAAACTCATGGCACTTGT +
Preference number: 3 (lower is better)
Translates to: PDPVKSGKGYEPFHALFTETQGC*KTHGTC
Trigger: ACAAGTGCCATGAGTTTTCAAGCATCCTTGGGTCTC...TGTGAAGAGAGCATGAAATGGCTCATAGCCCTTGCCTGACTTAACTGGATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR-3UTR CAA 90 bp AAGATGACAGGGTCCATGAGGAAGACGCGGCTAGACTCCTTATTGATAGATGCTTCATATTTGACAATGTaGCGAGTGCGCTCCTTGTTG +
Preference number: 3 (lower is better)
Translates to: KMTGSMRKTRLDSLLIDASYLTM*RVRSLL
Trigger: CAACAAGGAGCGCACTCGCAACATTGTCAAATATGA...AGCATCTATCAATAAGGAGTCTAGCCGCGTCTTCCTCATGGACCCTGTCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
CDS-3UTR TCA 90 bp CTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTCGGCCTCGTCCTCACTaGCCCCTGGCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LPGLAAALFRRKSGLAWARPRPH*PLAQVA
Trigger: TGCCACCTGTGCCAGGGGTCAGTGAGGACGAGGCCG...AGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGTTCCGGCCTCGGGGTaGCTCGGGACCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSVPASG*LGTPIP
Trigger: GGGGATGGGGGTCCCGAGCCACCCCGAGGCCGGAAC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTGGGACACATGCAGATTaGGGGCTGGAGGCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LPGLAAALFRRKSGLAWAGTHAD*GLEAFG
Trigger: CCCGAAGGCCTCCAGCCCCCAATCTGCATGTGTCCC...AGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CAA 72 bp GGCACAGGTGGCACAGGTGGCTCTGGTGGAGGCCCTTaGGCACCCCCACTGGCCCCTCGCAGGTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GTGGTGGSGGGP*APPLAPRRLLC
Trigger: GCACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAGGGCCTCCACCAGAGCCACCTGTGCCACCTGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
CDS-3UTR CCA 90 bp CTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTTGGCTGGGCCAGCACTaGGATCTGGGGGTCCAAACT +
Preference number: 4 (lower is better)
Translates to: LPGLAAALFRRKSGLAWAWLGQH*DLGVQT
Trigger: AGTTTGGACCCCCAGATCCCAGTGCTGGCCCAGCCA...AGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp CTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTGGCGGGCCAGCTCACTaGCAATGTTGGCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: LPGLAAALFRRKSGLAWAGGPAH*QCWPHS
Trigger: AGAATGCGGCCAACATTGCCAGTGAGCTGGCCCGCC...AGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAACTGGTGGAGGCCCTTTaGCACCCCCACTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQELVEAL*HPHWPL
Trigger: GAGGGGCCAGTGGGGGTGCCAAAGGGCCTCCACCAG...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAAGAGGGGCCGGCTGGTaGCCCCATCCTCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQERGAGW*PHPLPY
Trigger: GTACGGCAGAGGATGGGGCCACCAGCCGGCCCCTCT...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGAGTCCCGCAGGTTaGCCCCGCTGGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEASPAG*PRWHRG
Trigger: CCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCGC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCTGGCCCCTCGAGGCTaGGGGCTGCCAGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSLAPRG*GLPGSL
Trigger: AAGGCTACCTGGCAGCCCCCAGCCTCGAGGGGCCAG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGTGTGTGGTGAGGGGTaGCCGGCGGAGTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEVCGEG*PAEWSG
Trigger: ACCACTCCACTCCGCCGGGCACCCCTCACCACACAC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGACTCCTGTGCCTGCCAGTCCCCGAGGAGCTCCTCACCCCACAGCTTCTTCCAGTGGCAGGGTGTCCATaGCACAGGCTTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLLCLPVPEELLTPQLLPVAGCP*HRLPGL
Trigger: GAGGCCGGGAAGCCTGTGGCATGGACACCCTGCCAC...TGGAAGAAGCTGTGGGGTGAGGAGCTCCTCGGGGACTGGCAGGCACAGGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp ACACATACAGGAAGTCCTGGCTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAACCCGGCGGAGTGGAGTaGTGGCTGCAGGCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: THTGSPGCQGWPLHCSGEPGGVE*WLQARL
Trigger: CAGCCTCGCCTGCAGCCACCACTCCACTCCGCCGGG...TTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAGCCAGGACTTCCTGTATGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp GGACTCCTGTGCCTGCCAGTCCCCGAGGAGCTCCTCACCCCACAGCTTCTTCCAACCCTGTTGGGTAGCTaGCCACTGGACCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: GLLCLPVPEELLTPQLLPTLLGS*PLDPPD
Trigger: GTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGT...TGGAAGAAGCTGTGGGGTGAGGAGCTCCTCGGGGACTGGCAGGCACAGGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp CTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTGTTACTTCGCATGGCTaGGGTCTTAAGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LPGLAAALFRRKSGLAWAVTSHG*GLKGAV
Trigger: CACGGCTCCCTTAAGACCTCAGCCATGCGAAGTAAC...AGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAACAATGGCTGCTGCGATaGCGACCACCAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEQWLLR*RPPGLG
Trigger: TCCCAGCCCTGGTGGTCGGCATCGCAGCAGCCATTG...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGGTGGCCCCATCCTCTaGCGTACAGCTCTCCGACTC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSGGPIL*RTALRL
Trigger: GAGTCGGAGAGCTGTACGGCAGAGGATGGGGCCACC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGCGCATCAACCCAAATaGGAGCCCAGCCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSAHQPK*EPSPAQ
Trigger: CTGAGCCGGGCTGGGCTCCCATTTGGGTTGATGCGC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTCCCGGCGGAGTGGAGTaGTGGCTGCAGGCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPPGGVE*WLQARL
Trigger: CAGCCTCGCCTGCAGCCACCACTCCACTCCGCCGGG...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGGGTGCCCGGCGGAGTaGAGTGGTGGCTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGGCPAE*SGGCRR
Trigger: TCGCCTGCAGCCACCACTCCACTCCGCCGGGCACCC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGGGACACATGCAGATTaGGGGCTGGAGGCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEGTHAD*GLEAFG
Trigger: CCCGAAGGCCTCCAGCCCCCAATCTGCATGTGTCCC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGGGACCCCCATCCCCTaGAGGGAAATCACCGCTTCG +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSGTPIP*REITAS
Trigger: CGAAGCGGTGATTTCCCTCCAGGGGATGGGGGTCCC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGTTCCGGCCTCGGGGTaGCTCGGGACCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKVPASG*LGTPIP
Trigger: GGGGATGGGGGTCCCGAGCCACCCCGAGGCCGGAAC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGTTCCGGCCTCGGGGTaGCTCGGGACCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLVPASG*LGTPIP
Trigger: GGGGATGGGGGTCCCGAGCCACCCCGAGGCCGGAAC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CACTTGGGGACCTGCCATGTAGCTCTGAGGCCTAGAAGCAAGTTGCTCCCTGTGGTTCCGGCCTCGGGGTaGCTCGGGACCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: HLGTCHVALRPRSKLLPVVPASG*LGTPIP
Trigger: GGGGATGGGGGTCCCGAGCCACCCCGAGGCCGGAAC...CACAGGGAGCAACTTGCTTCTAGGCCTCAGAGCTACATGGCAGGTCCCCAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
3UTR CAA 72 bp TCCCTTGGGGCAAGGTCTCTCCACCAGCATACCCTGTaGGGTAGCTGGCCACTGGACCCGCCGGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLGARSLHQHTL*GSWPLDPPDLS
Trigger: AGAGAGGTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGTGGAGAGACCTTGCCCCAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
CDS-3UTR TCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACCACTGGGTGTGTGGTaGGGGGTGCCCGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASPLGVW*GVPGGV
Trigger: CACTCCGCCGGGCACCCCTCACCACACACCCAGTGG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCCACTGGGTGTGTGGTaGGGGGTGCCCGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKPLGVW*GVPGGV
Trigger: CACTCCGCCGGGCACCCCTCACCACACACCCAGTGG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCCACTGGGTGTGTGGTaGGGGGTGCCCGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWPLGVW*GVPGGV
Trigger: CACTCCGCCGGGCACCCCTCACCACACACCCAGTGG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGAGAAGTGCAGTTGCTaGGGTCAGGGCCCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEEKCSC*GQGPED
Trigger: ATCCTCGGGGCCCTGACCTCAGCAACTGCACTTCTC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGAGAAGTGCAGTTGCTaGGGTCAGGGCCCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSEKCSC*GQGPED
Trigger: ATCCTCGGGGCCCTGACCTCAGCAACTGCACTTCTC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAATGCTGCGATGACCTGTaGGTTGACCACCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQECCDDL*VDHQGG
Trigger: GCCTCCCTGGTGGTCAACTCACAGGTCATCGCAGCA...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTCGGCCTCGTCCTCACTaGCCCCTGGCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPRPRPH*PLAQVA
Trigger: TGCCACCTGTGCCAGGGGTCAGTGAGGACGAGGCCG...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGTGTTGCGGTCAGTCTaGAAGCCCCGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEVLRSV*KPRRKQ
Trigger: CTGCTTCCTGCGGGGCTTGCAGACTGACCGCAACAC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGTAGTCAATGGCTGCTaGGATGCCGACCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSVVNGC*DADHQG
Trigger: GCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTAC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCAGCAGGAAGAGCAGTaGAATGGCACCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSQQEEQ*NGTQRP
Trigger: TGGGCGCTGGGTGCCATTGCACTGCTCTTCCTGCTG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCAGGTGGGGAGCGGATaGAGCAGTAGGAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSQVGSG*SSRSDA
Trigger: TGCGTCACTCCTACTGCTGCATCCGCTCCCCACCTG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGGCGGAGTGGAGTGGTaGCTGCAGGCGAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGGGVEW*LQARLC
Trigger: GCACAGCCTCGCCTGCAGCCACCACTCCACTCCGCC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCCCGGCGGAGTGGAGTaGTGGCTGCAGGCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKPGGVE*WLQARL
Trigger: CAGCCTCGCCTGCAGCCACCACTCCACTCCGCCGGG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACCCGGCGGAGTGGAGTaGTGGCTGCAGGCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLPGGVE*WLQARL
Trigger: CAGCCTCGCCTGCAGCCACCACTCCACTCCGCCGGG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCCCGGCGGAGTGGAGTaGTGGCTGCAGGCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVPGGVE*WLQARL
Trigger: CAGCCTCGCCTGCAGCCACCACTCCACTCCGCCGGG...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGGGTGCCCGGCGGAGTaGAGTGGTGGCTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASGCPAE*SGGCRR
Trigger: TCGCCTGCAGCCACCACTCCACTCCGCCGGGCACCC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTGGGCGGGTGCCCGGCGGAGTaGAGTGGTGGCTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: SPHSFFQLYWCLMALGLGGCPAE*SGGCRR
Trigger: TCGCCTGCAGCCACCACTCCACTCCGCCGGGCACCC...GCCCAGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGGGTGCCCGGCGGAGTaGAGTGGTGGCTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKGCPAE*SGGCRR
Trigger: TCGCCTGCAGCCACCACTCCACTCCGCCGGGCACCC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGGCGGGCCAGCTCACTaGCAATGTTGGCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEGGPAH*QCWPHS
Trigger: AGAATGCGGCCAACATTGCCAGTGAGCTGGCCCGCC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCTGGTGGAGGCCCTTTaGCACCCCCACTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGLVEAL*HPHWPL
Trigger: GAGGGGCCAGTGGGGGTGCCAAAGGGCCTCCACCAG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACTGGTGGAGGCCCTTTaGCACCCCCACTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQLVEAL*HPHWPL
Trigger: GAGGGGCCAGTGGGGGTGCCAAAGGGCCTCCACCAG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCACAGGTGGCACAGGTaGCTCTGGTGGAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSHRWHR*LWWRPF
Trigger: AAAGGGCCTCCACCAGAGCCACCTGTGCCACCTGTG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCAGAGGGGCCGGCTGGTaGCCCCATCCTCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGRGAGW*PHPLPY
Trigger: GTACGGCAGAGGATGGGGCCACCAGCCGGCCCCTCT...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTAGAGGGGCCGGCTGGTaGCCCCATCCTCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPRGAGW*PHPLPY
Trigger: GTACGGCAGAGGATGGGGCCACCAGCCGGCCCCTCT...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGCAGGTTGGCCCCGCTaGCATAGAGGGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQAGWPR*HRGSPG
Trigger: GCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGCGAGTCCCGCAGGTTaGCCCCGCTGGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQASPAG*PRWHRG
Trigger: CCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCGC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAACGTGTAGGGGTTaGGCTGGCTTACCACCAAGC +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEATCRG*AGLPPS
Trigger: GCTTGGTGGTAAGCCAGCTCAACCCCTACACGTTGC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGCCACTGGGTGTGTGGTaGGGGGTGCCCGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQPLGVW*GVPGGV
Trigger: CACTCCGCCGGGCACCCCTCACCACACACCCAGTGG...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTCCGCAAGGAAGAGGTTaGTGCACAGATTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LPGLAAALFRRKSGLAWAPQGRG*CTDSCG
Trigger: TCCACAAGAATCTGTGCATCAACCTCTTCCTTGCGG...AGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp CTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTAGTGAAAGACAAAGATaGAGACCCCCTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: LPGLAAALFRRKSGLAWASERQR*RPPGRR
Trigger: ACGCCTTCCAGGGGGTCTTCATCTTTGTCTTTCACT...AGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACGGCCTCGTCCTCACTaGCCCCTGGCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASRPRPH*PLAQVA
Trigger: TGCCACCTGTGCCAGGGGTCAGTGAGGACGAGGCCG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCCTGCAGCGGGTCCTTaGACCATGCACCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSPAAGP*TMHQTD
Trigger: ATCAGTCTGGTGCATGGTGCAAGGACCCGCTGCAGG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000045393.15
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGTGTGTGGTGAGGGGTaGCCGGCGGAGTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQVCGEG*PAEWSG
Trigger: ACCACTCCACTCCGCCGGGCACCCCTCACCACACAC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGTGTGTGGTGAGGGGTaGCCGGCGGAGTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGVCGEG*PAEWSG
Trigger: ACCACTCCACTCCGCCGGGCACCCCTCACCACACAC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGTGGCAGGGTGTCCATaGCACAGGCTTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGVAGCP*HRLPGL
Trigger: GAGGCCGGGAAGCCTGTGGCATGGACACCCTGCCAC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGGCGGAGTGGAGTGGTaGCTGCAGGCGAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWGGVEW*LQARLC
Trigger: GCACAGCCTCGCCTGCAGCCACCACTCCACTCCGCC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGGCGGAGTGGAGTGGTaGCTGCAGGCGAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKGGVEW*LQARLC
Trigger: GCACAGCCTCGCCTGCAGCCACCACTCCACTCCGCC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAACCCTGTTGGGTAGCTaGCCACTGGACCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQTLLGS*PLDPPD
Trigger: GTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp ACACATACAGGAAGTCCTGGCTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAATAGAGCCCCGTGTGTaGCGGGCCAGCTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: THTGSPGCQGWPLHCSGEIEPRV*RASSLA
Trigger: TGCCAGTGAGCTGGCCCGCCACACACGGGGCTCTAT...TTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAGCCAGGACTTCCTGTATGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCGTAGGGCCTGGAGCTaGGCATCCAGGATATCTAGC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSRRAWS*ASRISS
Trigger: GCTAGATATCCTGGATGCCCAGCTCCAGGCCCTACG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGCAGGCTGGGCTGGAGGTGTTTAGAGGACACCCTAAGCCTGACAGAGGGCTTGGTGAGTGCCCCCAGGTaGGGAGCGGATGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: GRLGWRCLEDTLSLTEGLVSAPR*GADAAV
Trigger: TACTGCTGCATCCGCTCCCCACCTGGGGGCACTCAC...CAAGCCCTCTGTCAGGCTTAGGGTGTCCTCTAAACACCTCCAGCCCAGCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGGGTTGGTCAGTAGGTaGTTCCCCATGGTACCTCGG +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEGLVSR*FPMVPR
Trigger: CCGAGGTACCATGGGGAACCACCTACTGACCAACCC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGCTGTAGCACGGGGTTaGTCAGTAGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSAVARG*SVGGSP
Trigger: TGGGGAACCACCTACTGACCAACCCCGTGCTACAGC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACACAGGTGGCTCTGGTaGAGGCCCTTTGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQHRWLW*RPFGTP
Trigger: GGGGGTGCCAAAGGGCCTCCACCAGAGCCACCTGTG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGACCCCTGGCACAGGTaGCACAGGTGGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGDPWHR*HRWLWW
Trigger: CCACCAGAGCCACCTGTGCCACCTGTGCCAGGGGTC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAAGAGGGGCCGGCTGGTaGCCCCATCCTCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASRGAGW*PHPLPY
Trigger: GTACGGCAGAGGATGGGGCCACCAGCCGGCCCCTCT...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGCAGGTTGGCCCCGCTaGCATAGAGGGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKAGWPR*HRGSPG
Trigger: GCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGCAGGTTGGCCCCGCTaGCATAGAGGGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLAGWPR*HRGSPG
Trigger: GCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGCAGGTTGGCCCCGCTaGCATAGAGGGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASAGWPR*HRGSPG
Trigger: GCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGCAGGTTGGCCCCGCTaGCATAGAGGGAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVAGWPR*HRGSPG
Trigger: GCCGGGACTCCCTCTATGCCAGCGGGGCCAACCTGC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGCGAGTCCCGCAGGTTaGCCCCGCTGGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLASPAG*PRWHRG
Trigger: CCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCGC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACTGGCCCCTCGAGGCTaGGGGCTGCCAGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLLAPRG*GLPGSL
Trigger: AAGGCTACCTGGCAGCCCCCAGCCTCGAGGGGCCAG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCTGGCCCCTCGAGGCTaGGGGCTGCCAGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWLAPRG*GLPGSL
Trigger: AAGGCTACCTGGCAGCCCCCAGCCTCGAGGGGCCAG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGGTTCGCATTGGTGTTaGAGGCATAGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEGSHWC*RHSPRG
Trigger: ACCGCGTGGACTATGCCTTCAACACCAATGCGAACC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAGCGAGCAGGTTCTCTaGCATTGTCAGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSSEQVL*HCQPAG
Trigger: TCCTGCTGGCTGACAATGTCAGAGAACCTGCTCGCT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAAGCGAGCAGGTTCTCTaGCATTGTCAGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQESEQVL*HCQPAG
Trigger: TCCTGCTGGCTGACAATGTCAGAGAACCTGCTCGCT...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGGGGCGAGGAGGGATTaGAGCCCACGGACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPGARRD*SPRTLQ
Trigger: TTGCAGAGTCCGTGGGCTTCAATCCCTCCTCGCCCC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTCCACGCGGTTGCCTaGGGCCTCGCTATCATCGTC +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPVHAVA*GLAIIV
Trigger: GACGATGATAGCGAGGCCGCAGGCAACCGCGTGGAC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGTGTGTGGTGAGGGGTaGCCGGCGGAGTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKVCGEG*PAEWSG
Trigger: ACCACTCCACTCCGCCGGGCACCCCTCACCACACAC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCAATGGCTGCTGCGATaGCGACCACCAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGQWLLR*RPPGLG
Trigger: TCCCAGCCCTGGTGGTCGGCATCGCAGCAGCCATTG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGTGGCAGGGTGTCCATaGCACAGGCTTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVVAGCP*HRLPGL
Trigger: GAGGCCGGGAAGCCTGTGGCATGGACACCCTGCCAC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGTGGCAGGGTGTCCATaGCACAGGCTTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWVAGCP*HRLPGL
Trigger: GAGGCCGGGAAGCCTGTGGCATGGACACCCTGCCAC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAAAAGGCGGCAGCATCTaGCAGGTTCCGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASKGGSI*QVPASG
Trigger: CCCCGAGGCCGGAACCTGGCAGATGCTGCCGCCTTT...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGAAAGGCGGCAGCATCTaGCAGGTTCCGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVKGGSI*QVPASG
Trigger: CCCCGAGGCCGGAACCTGGCAGATGCTGCCGCCTTT...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAAAGGCGGCAGCATCTaGCAGGTTCCGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKKGGSI*QVPASG
Trigger: CCCCGAGGCCGGAACCTGGCAGATGCTGCCGCCTTT...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAAAAGGCGGCAGCATCTaGCAGGTTCCGGCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLKGGSI*QVPASG
Trigger: CCCCGAGGCCGGAACCTGGCAGATGCTGCCGCCTTT...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTCTCGAGGCTGGGGGCTaGCAGGTAGCCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPLEAGG*QVAFMA
Trigger: AGCCATGAAGGCTACCTGGCAGCCCCCAGCCTCGAG...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACTCGAGGCTGGGGGCTaGCAGGTAGCCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQLEAGG*QVAFMA
Trigger: AGCCATGAAGGCTACCTGGCAGCCCCCAGCCTCGAG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGGGTGCCCGGCGGAGTaGAGTGGTGGCTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMGCPAE*SGGCRR
Trigger: TCGCCTGCAGCCACCACTCCACTCCGCCGGGCACCC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAATGCTGGAGCTGTGGCTaGAGGCAGGTCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQCWSCG*RQVRSQ
Trigger: CTGGGACCTGACCTGCCTCCAGCCACAGCTCCAGCA...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAATAGAGCCCCGTGTGTaGCGGGCCAGCTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQIEPRV*RASSLA
Trigger: TGCCAGTGAGCTGGCCCGCCACACACGGGGCTCTAT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAACTGTGGCATTCTCCGTaGACAAGAAGAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQELWHSP*TRRGPG
Trigger: ACCTGGGCCTCTTCTTGTCCACGGAGAATGCCACAG...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCTGTGGCATTCTCCGTaGACAAGAAGAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSLWHSP*TRRGPG
Trigger: ACCTGGGCCTCTTCTTGTCCACGGAGAATGCCACAG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGTGAGTGCCCCCAGGTaGGGAGCGGATGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQVSAPR*GADAAV
Trigger: TACTGCTGCATCCGCTCCCCACCTGGGGGCACTCAC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGGGACCCCCATCCCCTaGAGGGAAATCACCGCTTCG +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQGTPIP*REITAS
Trigger: CGAAGCGGTGATTTCCCTCCAGGGGATGGGGGTCCC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGTTCCGGCCTCGGGGTaGCTCGGGACCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEVPASG*LGTPIP
Trigger: GGGGATGGGGGTCCCGAGCCACCCCGAGGCCGGAAC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCACAGGTGGCTCTGGTaGAGGCCCTTTGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVHRWLW*RPFGTP
Trigger: GGGGGTGCCAAAGGGCCTCCACCAGAGCCACCTGTG...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCACAGGTGGCTCTGGTaGAGGCCCTTTGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWHRWLW*RPFGTP
Trigger: GGGGGTGCCAAAGGGCCTCCACCAGAGCCACCTGTG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGACCCCTGGCACAGGTaGCACAGGTGGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKDPWHR*HRWLWW
Trigger: CCACCAGAGCCACCTGTGCCACCTGTGCCAGGGGTC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CACTTGGGGACCTGCCATGTAGCTCTGAGGCCTAGAAGCAAGTTGCTCCCTGTGGACCCCTGGCACAGGTaGCACAGGTGGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HLGTCHVALRPRSKLLPVDPWHR*HRWLWW
Trigger: CCACCAGAGCCACCTGTGCCACCTGTGCCAGGGGTC...CACAGGGAGCAACTTGCTTCTAGGCCTCAGAGCTACATGGCAGGTCCCCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGACCCCTGGCACAGGTaGCACAGGTGGCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWDPWHR*HRWLWW
Trigger: CCACCAGAGCCACCTGTGCCACCTGTGCCAGGGGTC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGTCCTCACTGACCCCTaGCACAGGTGGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQVLTDP*HRWHRW
Trigger: CCACCTGTGCCACCTGTGCCAGGGGTCAGTGAGGAC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTCCTCACTGACCCCTaGCACAGGTGGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPVLTDP*HRWHRW
Trigger: CCACCTGTGCCACCTGTGCCAGGGGTCAGTGAGGAC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCTCATCCAGATCACTCTaGTACAGCACCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSSSRSL*YSTDWA
Trigger: GGCCCAGTCGGTGCTGTACCAGAGTGATCTGGATGA...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAATCATCCAGATCACTCTaGTACAGCACCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQESSRSL*YSTDWA
Trigger: GGCCCAGTCGGTGCTGTACCAGAGTGATCTGGATGA...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGGTAGCCTTCATGGCTaGGCCGCCGCACCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPGSLHG*AAAPGS
Trigger: ACTACCAGGTGCGGCGGCCCAGCCATGAAGGCTACC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACTGTGGTGGTGGTACTaGGAGGCGGGGAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASLWWWY*EAGKWL
Trigger: CAGCCACTTCCCCGCCTCTCAGTACCACCACCACAG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCTGTGGTGGTGGTACTaGGAGGCGGGGAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWLWWWY*EAGKWL
Trigger: CAGCCACTTCCCCGCCTCTCAGTACCACCACCACAG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCAGGTCCCAGCTGGTTaGTGGCACCCACTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWQVPAG*WHPLGV
Trigger: CACACCCAGTGGGTGCCATCAACCAGCTGGGACCTG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAACAGGTCCCAGCTGGTTaGTGGCACCCACTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VKSCSGGSHPGWDVHIQEQVPAG*WHPLGV
Trigger: CACACCCAGTGGGTGCCATCAACCAGCTGGGACCTG...TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACAGGTCCCAGCTGGTTaGTGGCACCCACTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLQVPAG*WHPLGV
Trigger: CACACCCAGTGGGTGCCATCAACCAGCTGGGACCTG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGAGAAGTGCAGTTGCTaGGGTCAGGGCCCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGEKCSC*GQGPED
Trigger: ATCCTCGGGGCCCTGACCTCAGCAACTGCACTTCTC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAGCATGGTGGCTGTATaGACCTGTTCGGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSSMVAV*TCSVAF
Trigger: GAATGCCACCGAACAGGTTCATACAGCCACCATGCT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTGGGCGGGGCGAGGAGGGATTaGAGCCCACGGACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SPHSFFQLYWCLMALGLGGARRD*SPRTLQ
Trigger: TTGCAGAGTCCGTGGGCTTCAATCCCTCCTCGCCCC...GCCCAGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGGGGCGAGGAGGGATTaGAGCCCACGGACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVGARRD*SPRTLQ
Trigger: TTGCAGAGTCCGTGGGCTTCAATCCCTCCTCGCCCC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCGTGGTGGTGTGGCGTaGGGCTACATAGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGRGGVA*GYIVLP
Trigger: TGGGAGGACTATGTAGCCGCACGCCACACCACCACG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAGACCACAAAGCCAGTaGCATCTACACGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSRPQSQ*HLHGWA
Trigger: TGCCCAACCGTGTAGATGGCACTGGCTTTGTGGTCT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGTCCACGCGGTTGCCTaGGGCCTCGCTATCATCGTC +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWVHAVA*GLAIIV
Trigger: GACGATGATAGCGAGGCCGCAGGCAACCGCGTGGAC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGTCCACGCGGTTGCCTaGGGCCTCGCTATCATCGTC +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASVHAVA*GLAIIV
Trigger: GACGATGATAGCGAGGCCGCAGGCAACCGCGTGGAC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGTCCACGCGGTTGCCTaGGGCCTCGCTATCATCGTC +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLVHAVA*GLAIIV
Trigger: GACGATGATAGCGAGGCCGCAGGCAACCGCGTGGAC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGAGTGGAGTGGTGGCTaGAGGCGAGGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWEWSGG*RRGCAG
Trigger: ACCAGCACAGCCTCGCCTGCAGCCACCACTCCACTC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGAGTGGAGTGGTGGCTaGAGGCGAGGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVEWSGG*RRGCAG
Trigger: ACCAGCACAGCCTCGCCTGCAGCCACCACTCCACTC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGAGTGGAGTGGTGGCTaGAGGCGAGGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASEWSGG*RRGCAG
Trigger: ACCAGCACAGCCTCGCCTGCAGCCACCACTCCACTC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGGTGTGTGGTGAGGGGTaGCCGGCGGAGTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQVCGEG*PAEWSG
Trigger: ACCACTCCACTCCGCCGGGCACCCCTCACCACACAC...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCCTTCGGGTACTGGGTaGTGGAGCTGTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVPSGTG*WSCGWR
Trigger: CCTCCAGCCACAGCTCCAGCACCCAGTACCCGAAGG...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCCTTCGGGTACTGGGTaGTGGAGCTGTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWPSGTG*WSCGWR
Trigger: CCTCCAGCCACAGCTCCAGCACCCAGTACCCGAAGG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGTTGCGGTCAGTCTaGAAGCCCCGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPVLRSV*KPRRKQ
Trigger: CTGCTTCCTGCGGGGCTTGCAGACTGACCGCAACAC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGTGTTGCGGTCAGTCTaGAAGCCCCGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQVLRSV*KPRRKQ
Trigger: CTGCTTCCTGCGGGGCTTGCAGACTGACCGCAACAC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAAAGTCCGGGCTGGCCTGGGCTGGTAATAGTACTTGGTaGGTGAATACTCGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: LPGLAAALFRRKSGLAWAGNSTW*VNTRSR
Trigger: TCGAGAGCGAGTATTCACGCACCAAGTACTATTACC...AGCCCAGGCCAGCCCGGACTTTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACAATGGCTGCTGCGATaGCGACCACCAGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLQWLLR*RPPGLG
Trigger: TCCCAGCCCTGGTGGTCGGCATCGCAGCAGCCATTG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGTAGTCAATGGCTGCTaGGATGCCGACCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQVVNGC*DADHQG
Trigger: GCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTAC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAGTGACGCAGGCACTTaGTGTACTCCTTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSSDAGT*CTPCAP
Trigger: AGGTGCACAAGGAGTACAGCAAGTGCCTGCGTCACT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCCTCGCAGGTTGTTGTaGACCAGCTCTGAGATGATC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSPRRLL*TSSEMI
Trigger: GATCATCTCAGAGCTGGTGCACAACAACCTGCGAGG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGGTGGCCCCATCCTCTaGCGTACAGCTCTCCGACTC +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWGGPIL*RTALRL
Trigger: GAGTCGGAGAGCTGTACGGCAGAGGATGGGGCCACC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGGTGGCCCCATCCTCTaGCGTACAGCTCTCCGACTC +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASGGPIL*RTALRL
Trigger: GAGTCGGAGAGCTGTACGGCAGAGGATGGGGCCACC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGTGACCAACTGCATTTaGCCGTCCCCATCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQVTNCI*PSPSGP
Trigger: AGGGCCCGATGGGGACGGGCAAATGCAGTTGGTCAC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGTGACCAACTGCATTTaGCCGTCCCCATCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGVTNCI*PSPSGP
Trigger: AGGGCCCGATGGGGACGGGCAAATGCAGTTGGTCAC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGCGCATCAACCCAAATaGGAGCCCAGCCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKAHQPK*EPSPAQ
Trigger: CTGAGCCGGGCTGGGCTCCCATTTGGGTTGATGCGC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGGCACCGCAGCTCGATaGGGTAGCCCTCACATGCTA +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGGTAAR*GSPHML
Trigger: TAGCATGTGAGGGCTACCCCATCGAGCTGCGGTGCC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCTGGGCAGTCTGTACGTaGTGGTGTGGCGTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGWAVCT*WCGVRL
Trigger: TAGCCGCACGCCACACCACCACGTACAGACTGCCCA...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAAGGTCAGGTCCCAGCTaGTTGATGGCACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQRSGPS*LMAPTG
Trigger: CCCAGTGGGTGCCATCAACCAGCTGGGACCTGACCT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTGCTGGAGCTGTGGCTaGAGGCAGGTCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVCWSCG*RQVRSQ
Trigger: CTGGGACCTGACCTGCCTCCAGCCACAGCTCCAGCA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGTGCTGGAGCTGTGGCTaGAGGCAGGTCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKCWSCG*RQVRSQ
Trigger: CTGGGACCTGACCTGCCTCCAGCCACAGCTCCAGCA...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCATGCAGATTGGGGGCTaGAGGCCTTCGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGMQIGG*RPSGTG
Trigger: CCCAGTACCCGAAGGCCTCCAGCCCCCAATCTGCAT...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGGGACACATGCAGATTaGGGGCTGGAGGCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKGTHAD*GLEAFG
Trigger: CCCGAAGGCCTCCAGCCCCCAATCTGCATGTGTCCC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCCGCCGGACCTCTCTaGGTTCACAGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGPAGPL*VHRRAQ
Trigger: CTGAGCTCTTCTGTGAACCCAGAGAGGTCCGGCGGG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGACCCTGTTGGGTAGCTaGCCACTGGACCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQTLLGS*PLDPPD
Trigger: GTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAGAGCTGGGAGGCACTaGAATGAGGCAATTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSRAGRH*NEAIPR
Trigger: TCGAGGAATTGCCTCATTCCAGTGCCTCCCAGCTCT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGATAGAGCCCCGTGTGTaGCGGGCCAGCTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVIEPRV*RASSLA
Trigger: TGCCAGTGAGCTGGCCCGCCACACACGGGGCTCTAT...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAATAGAGCCCCGTGTGTaGCGGGCCAGCTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLIEPRV*RASSLA
Trigger: TGCCAGTGAGCTGGCCCGCCACACACGGGGCTCTAT...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCTCACTGGGATACTCTTaGGGGAACACCAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSSLGYS*GNTNSC
Trigger: GCAGGAGTTGGTGTTCCCCCAAGAGTATCCCAGTGA...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCTGCCAGCTTCACTGTaGCATTCTCCGTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSLPASL*HSPWTR
Trigger: TCTTGTCCACGGAGAATGCCACAGTGAAGCTGGCAG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGGAAGAGCAGTGCAATaGCACCCAGCGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPGRAVQ*HPAPRT
Trigger: AGTCCTGGGCGCTGGGTGCCATTGCACTGCTCTTCC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGGAAGAGCAGTGCAATaGCACCCAGCGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQGRAVQ*HPAPRT
Trigger: AGTCCTGGGCGCTGGGTGCCATTGCACTGCTCTTCC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGTGAGTGCCCCCAGGTaGGGAGCGGATGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLVSAPR*GADAAV
Trigger: TACTGCTGCATCCGCTCCCCACCTGGGGGCACTCAC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGTGAGTGCCCCCAGGTaGGGAGCGGATGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKVSAPR*GADAAV
Trigger: TACTGCTGCATCCGCTCCCCACCTGGGGGCACTCAC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGTGAGTGCCCCCAGGTaGGGAGCGGATGCAGCAGTA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASVSAPR*GADAAV
Trigger: TACTGCTGCATCCGCTCCCCACCTGGGGGCACTCAC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGCAGGCTGGGCTGGAGGTGTTTAGAGGACACCCTAAGCCTGACAGAGGGCTTGGCTGTAGCACGGGGTTaGTCAGTAGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GRLGWRCLEDTLSLTEGLAVARG*SVGGSP
Trigger: TGGGGAACCACCTACTGACCAACCCCGTGCTACAGC...CAAGCCCTCTGTCAGGCTTAGGGTGTCCTCTAAACACCTCCAGCCCAGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGAAGTTGCCGTTAAGTaGCAGGGTGTCCATGCCACA +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEEVAVK*QGVHAT
Trigger: TGTGGCATGGACACCCTGCCACTTAACGGCAACTTC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGGGACCCCCATCCCCTaGAGGGAAATCACCGCTTCG +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWGTPIP*REITAS
Trigger: CGAAGCGGTGATTTCCCTCCAGGGGATGGGGGTCCC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACACAGGTGGCACAGGTaGCTCTGGTGGAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQHRWHR*LWWRPF
Trigger: AAAGGGCCTCCACCAGAGCCACCTGTGCCACCTGTG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGTCCTCACTGACCCCTaGCACAGGTGGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLVLTDP*HRWHRW
Trigger: CCACCTGTGCCACCTGTGCCAGGGGTCAGTGAGGAC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGAGAGGGGCCGGCTGGTaGCCCCATCCTCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMRGAGW*PHPLPY
Trigger: GTACGGCAGAGGATGGGGCCACCAGCCGGCCCCTCT...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGGTAGCCTTCATGGCTaGGCCGCCGCACCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASGSLHG*AAAPGS
Trigger: ACTACCAGGTGCGGCGGCCCAGCCATGAAGGCTACC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGCTGGCCCCTCGAGGCTaGGGGCTGCCAGGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMLAPRG*GLPGSL
Trigger: AAGGCTACCTGGCAGCCCCCAGCCTCGAGGGGCCAG...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTCTTGGGTGGCAGAGGTaGCAAGGACAGTCGTCACAC +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPLGWQR*QGQSSH
Trigger: GTGTGACGACTGTCCTTGTCACCTCTGCCACCCAAG...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACAGTTTCCCCGCTCTTaGTGCGGGTCCGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASQFPRS*CGSAGH
Trigger: ATGACCTGCGGACCCGCATCAAGAGCGGGGAAACTG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCAGTTTCCCCGCTCTTaGTGCGGGTCCGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWQFPRS*CGSAGH
Trigger: ATGACCTGCGGACCCGCATCAAGAGCGGGGAAACTG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAACCTCAGTTGCATAGATaGCCCACAGTCCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEPQLHR*PTVRSH
Trigger: ATGAGAACGGACTGTGGGTCATCTATGCAACTGAGG...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCCTCAGTTGCATAGATaGCCCACAGTCCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSPQLHR*PTVRSH
Trigger: ATGAGAACGGACTGTGGGTCATCTATGCAACTGAGG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGCAGGTCCCAGCTGGTTaGTGGCACCCACTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQQVPAG*WHPLGV
Trigger: CACACCCAGTGGGTGCCATCAACCAGCTGGGACCTG...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGAGAAGTGCAGTTGCTaGGGTCAGGGCCCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVEKCSC*GQGPED
Trigger: ATCCTCGGGGCCCTGACCTCAGCAACTGCACTTCTC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCTTCCATCAGCTTCACTaGGGAGGACACGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGFHQLH*GGHVPS
Trigger: GCTGGGGACGTGTCCTCCTCAGTGAAGCTGATGGAA...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTAGTTCTTGCCGGCTaGCTCTCGTTCAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPVVLAG*LSFNGP
Trigger: CGGCCCATTGAACGAGAGTCAGCCGGCAAGAACTAC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTGCTGCGATGACCTGTaGGTTGACCACCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVCCDDL*VDHQGG
Trigger: GCCTCCCTGGTGGTCAACTCACAGGTCATCGCAGCA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTATGCTGCGATGACCTGTaGGTTGACCACCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLCCDDL*VDHQGG
Trigger: GCCTCCCTGGTGGTCAACTCACAGGTCATCGCAGCA...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCATGCTGCGATGACCTGTaGGTTGACCACCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASCCDDL*VDHQGG
Trigger: GCCTCCCTGGTGGTCAACTCACAGGTCATCGCAGCA...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAGGAGCAGTTTGCATTaGAGTGGTTCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSRSSLH*SGSWPP
Trigger: TGGAGGCCAAGAACCACTTCAATGCAAACTGCTCCT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAGTGAAAGACAAAGATaGAGACCCCCTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSSERQR*RPPGRR
Trigger: ACGCCTTCCAGGGGGTCTTCATCTTTGTCTTTCACT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCGGCCTCGTCCTCACTaGCCCCTGGCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMERPRPH*PLAQVA
Trigger: TGCCACCTGTGCCAGGGGTCAGTGAGGACGAGGCCG...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCTGTGCGCCCGTAGTTTaGATTCTCCACCATGATGAC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSCAPVV*ILHHDD
Trigger: GTCATCATGGTGGAGAATGCAAACTACGGGCGCACA...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCAGTCAATGTGTCCGTaGGGTAGGGGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGQSMCP*GRGSRA
Trigger: TGCCCTGGATCCCCTACCGCACGGACACATTGACTG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCGTGGTGGTGTGGCGTaGGGCTACATAGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVRGGVA*GYIVLP
Trigger: TGGGAGGACTATGTAGCCGCACGCCACACCACCACG...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCGTGGTGGTGTGGCGTaGGGCTACATAGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKRGGVA*GYIVLP
Trigger: TGGGAGGACTATGTAGCCGCACGCCACACCACCACG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CACTTGGGGACCTGCCATGTAGCTCTGAGGCCTAGAAGCAAGTTGCTCCCTGTGCGTGGTGGTGTGGCGTaGGGCTACATAGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: HLGTCHVALRPRSKLLPVRGGVA*GYIVLP
Trigger: TGGGAGGACTATGTAGCCGCACGCCACACCACCACG...CACAGGGAGCAACTTGCTTCTAGGCCTCAGAGCTACATGGCAGGTCCCCAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTCATAGTCCACGCGGTTaGCTGCGGCCTCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPHSPRG*LRPRYH
Trigger: ATGATAGCGAGGCCGCAGGCAACCGCGTGGACTATG...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACATAGTCCACGCGGTTaGCTGCGGCCTCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQHSPRG*LRPRYH
Trigger: ATGATAGCGAGGCCGCAGGCAACCGCGTGGACTATG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGCCTTCGGGTACTGGGTaGTGGAGCTGTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQPSGTG*WSCGWR
Trigger: CCTCCAGCCACAGCTCCAGCACCCAGTACCCGAAGG...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTCCGTTGCGGCTGTTCTaGTTGATGGTGTTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPPLRLF*LMVLAE
Trigger: CTCCGCCAACACCATCAAGCAGAACAGCCGCAACGG...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGTGTTGCGGTCAGTCTaGAAGCCCCGCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLVLRSV*KPRRKQ
Trigger: CTGCTTCCTGCGGGGCTTGCAGACTGACCGCAACAC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGTAGTCAATGGCTGCTaGGATGCCGACCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKVVNGC*DADHQG
Trigger: GCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTAC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTTCGGTAGTCAATGGCTaGTGCGATGCCGACCACCAG +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPSVVNG*CDADHQ
Trigger: CTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGA...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAACTTCGGATCATCTTGTaGAGGGTCACCATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQELRIIL*RVTMRN
Trigger: GTTCCTCATGGTGACCCTGCACAAGATGATCCGAAG...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCTTCGGATCATCTTGTaGAGGGTCACCATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSLRIIL*RVTMRN
Trigger: GTTCCTCATGGTGACCCTGCACAAGATGATCCGAAG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCAGCAGGAAGAGCAGTaGAATGGCACCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVQQEEQ*NGTQRP
Trigger: TGGGCGCTGGGTGCCATTGCACTGCTCTTCCTGCTG...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACAGCAGGAAGAGCAGTaGAATGGCACCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLQQEEQ*NGTQRP
Trigger: TGGGCGCTGGGTGCCATTGCACTGCTCTTCCTGCTG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCAGCAGGAAGAGCAGTaGAATGGCACCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWQQEEQ*NGTQRP
Trigger: TGGGCGCTGGGTGCCATTGCACTGCTCTTCCTGCTG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCAGGTGGGGAGCGGATaGAGCAGTAGGAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKQVGSG*SSRSDA
Trigger: TGCGTCACTCCTACTGCTGCATCCGCTCCCCACCTG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCAGGTGGGGAGCGGATaGAGCAGTAGGAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWQVGSG*SSRSDA
Trigger: TGCGTCACTCCTACTGCTGCATCCGCTCCCCACCTG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACAGGTGGGGAGCGGATaGAGCAGTAGGAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASQVGSG*SSRSDA
Trigger: TGCGTCACTCCTACTGCTGCATCCGCTCCCCACCTG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAAAGGAGGACTCTGTCTaGTTCCTCACGGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEKEDSV*FLTVSF
Trigger: GAATGACACCGTGAGGAAGCAGACAGAGTCCTCCTT...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGTGACCAACTGCATTTaGCCGTCCCCATCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKVTNCI*PSPSGP
Trigger: AGGGCCCGATGGGGACGGGCAAATGCAGTTGGTCAC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGTGACCAACTGCATTTaGCCGTCCCCATCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWVTNCI*PSPSGP
Trigger: AGGGCCCGATGGGGACGGGCAAATGCAGTTGGTCAC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGTGGGCAGTCTGTACGTaGTGGTGTGGCGTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKWAVCT*WCGVRL
Trigger: TAGCCGCACGCCACACCACCACGTACAGACTGCCCA...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTATGGGCAGTCTGTACGTaGTGGTGTGGCGTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLWAVCT*WCGVRL
Trigger: TAGCCGCACGCCACACCACCACGTACAGACTGCCCA...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCATGGGCAGTCTGTACGTaGTGGTGTGGCGTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASWAVCT*WCGVRL
Trigger: TAGCCGCACGCCACACCACCACGTACAGACTGCCCA...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTGGCTGGGCCAGCACTaGGATCTGGGGGTCCAAACT +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVWLGQH*DLGVQT
Trigger: AGTTTGGACCCCCAGATCCCAGTGCTGGCCCAGCCA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGTTGATGGCACCCACTaGGTGTGTGGTGAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLVDGTH*VCGEGC
Trigger: GCACCCCTCACCACACACCCAGTGGGTGCCATCAAC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGTTGATGGCACCCACTaGGTGTGTGGTGAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWVDGTH*VCGEGC
Trigger: GCACCCCTCACCACACACCCAGTGGGTGCCATCAAC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGTTGATGGCACCCACTaGGTGTGTGGTGAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVVDGTH*VCGEGC
Trigger: GCACCCCTCACCACACACCCAGTGGGTGCCATCAAC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGAGGTCAGGTCCCAGCTaGTTGATGGCACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWRSGPS*LMAPTG
Trigger: CCCAGTGGGTGCCATCAACCAGCTGGGACCTGACCT...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAATGCAGATTGGGGGCTaGAGGCCTTCGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASMQIGG*RPSGTG
Trigger: CCCAGTACCCGAAGGCCTCCAGCCCCCAATCTGCAT...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAAATGCAGATTGGGGGCTaGAGGCCTTCGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: VKSCSGGSHPGWDVHIQEMQIGG*RPSGTG
Trigger: CCCAGTACCCGAAGGCCTCCAGCCCCCAATCTGCAT...TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCCCGCCGGACCTCTCTaGGTTCACAGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVPAGPL*VHRRAQ
Trigger: CTGAGCTCTTCTGTGAACCCAGAGAGGTCCGGCGGG...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACCCGCCGGACCTCTCTaGGTTCACAGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASPAGPL*VHRRAQ
Trigger: CTGAGCTCTTCTGTGAACCCAGAGAGGTCCGGCGGG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAACCCTGTTGGGTAGCTaGCCACTGGACCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSTLLGS*PLDPPD
Trigger: GTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGT...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGACCCTGTTGGGTAGCTaGCCACTGGACCCGCCGGAC +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMTLLGS*PLDPPD
Trigger: GTCCGGCGGGTCCAGTGGCCAGCTACCCAACAGGGT...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCACCAGCATACCCTGTTaGGTAGCTGGCCACTGGACC +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGTSIPC*VAGHWT
Trigger: GGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGT...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGGCGGGCCAGCTCACTaGCAATGTTGGCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKGGPAH*QCWPHS
Trigger: AGAATGCGGCCAACATTGCCAGTGAGCTGGCCCGCC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGGCGGGCCAGCTCACTaGCAATGTTGGCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASGGPAH*QCWPHS
Trigger: AGAATGCGGCCAACATTGCCAGTGAGCTGGCCCGCC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACGTAGGGCCTGGAGCTaGGCATCCAGGATATCTAGC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQRRAWS*ASRISS
Trigger: GCTAGATATCCTGGATGCCCAGCTCCAGGCCCTACG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAATGGCGGAGAGCTGAATaGAGTTCTCACTGGGATACT +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEWRRAE*SSHWDT
Trigger: AGTATCCCAGTGAGAACTCCATTCAGCTCTCCGCCA...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCTGGCGGAGAGCTGAATaGAGTTCTCACTGGGATACT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSWRRAE*SSHWDT
Trigger: AGTATCCCAGTGAGAACTCCATTCAGCTCTCCGCCA...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAATGGTATGGGTCTTATTaGACTCCACCAATCGGCAGC +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEWYGSY*TPPIGS
Trigger: GCTGCCGATTGGTGGAGTCCAATAAGACCCATACCA...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGGAAGAGCAGTGCAATaGCACCCAGCGCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLGRAVQ*HPAPRT
Trigger: AGTCCTGGGCGCTGGGTGCCATTGCACTGCTCTTCC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAAAGATGAAGACCCCCTaGAAGGCGTTGAAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEKMKTP*KALKVV
Trigger: CACTACCTTCAACGCCTTCCAGGGGGTCTTCATCTT...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACTTTGGCACCCCCACTaGCCCCTCGCAGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLLWHPH*PLAGCC
Trigger: ACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACTTTGGCACCCCCACTaGCCCCTCGCAGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASLWHPH*PLAGCC
Trigger: ACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CACTTGGGGACCTGCCATGTAGCTCTGAGGCCTAGAAGCAAGTTGCTCCCTGTGCTTTGGCACCCCCACTaGCCCCTCGCAGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: HLGTCHVALRPRSKLLPVLWHPH*PLAGCC
Trigger: ACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAG...CACAGGGAGCAACTTGCTTCTAGGCCTCAGAGCTACATGGCAGGTCCCCAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCTTTGGCACCCCCACTaGCCCCTCGCAGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWLWHPH*PLAGCC
Trigger: ACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCACAGGTGGCACAGGTaGCTCTGGTGGAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWHRWHR*LWWRPF
Trigger: AAAGGGCCTCCACCAGAGCCACCTGTGCCACCTGTG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGGTGTAGTAGATTTCTaGGGGCCCAGGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLGVVDF*GPRGSR
Trigger: CCTGCTCCCCCTGGGCCCCCAGAAATCTACTACACC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGGGTAGCCTTCATGGCTaGGCCGCCGCACCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQGSLHG*AAAPGS
Trigger: ACTACCAGGTGCGGCGGCCCAGCCATGAAGGCTACC...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGCAACGTGTAGGGGTTaGGCTGGCTTACCACCAAGC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKATCRG*AGLPPS
Trigger: GCTTGGTGGTAAGCCAGCTCAACCCCTACACGTTGC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAAGCAACGTGTAGGGGTTaGGCTGGCTTACCACCAAGC +
Preference number: 4 (lower is better)
Translates to: VKSCSGGSHPGWDVHIQEATCRG*AGLPPS
Trigger: GCTTGGTGGTAAGCCAGCTCAACCCCTACACGTTGC...TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGGTTCGCATTGGTGTTaGAGGCATAGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGGSHWC*RHSPRG
Trigger: ACCGCGTGGACTATGCCTTCAACACCAATGCGAACC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGGTTCGCATTGGTGTTaGAGGCATAGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPGSHWC*RHSPRG
Trigger: ACCGCGTGGACTATGCCTTCAACACCAATGCGAACC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGCTGTGGTGGTGGTACTaGGAGGCGGGGAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMLWWWY*EAGKWL
Trigger: CAGCCACTTCCCCGCCTCTCAGTACCACCACCACAG...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCATTCTCTCCACTCTTaGTCTTCTGGGCTACTTGGT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSHSLHS*SSGLLG
Trigger: ACCAAGTAGCCCAGAAGATCAAGAGTGGAGAGAATG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAATTCCATCAGCTTCACTaGGGAGGACACGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VKSCSGGSHPGWDVHIQEFHQLH*GGHVPS
Trigger: GCTGGGGACGTGTCCTCCTCAGTGAAGCTGATGGAA...TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTTCCATCAGCTTCACTaGGGAGGACACGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVFHQLH*GGHVPS
Trigger: GCTGGGGACGTGTCCTCCTCAGTGAAGCTGATGGAA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGTAGTTCTTGCCGGCTaGCTCTCGTTCAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVVVLAG*LSFNGP
Trigger: CGGCCCATTGAACGAGAGTCAGCCGGCAAGAACTAC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp ACACATACAGGAAGTCCTGGCTGCCAGGGCTGGCCGCTGCACTGTTCCGGAGAATCTCCACCACAGCCTTaGTGTAGTCCTTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: THTGSPGCQGWPLHCSGESPPQP*CSPCRF
Trigger: GAACCTGCAAGGACTACATCAAGGCTGTGGTGGAGA...TTCTCCGGAACAGTGCAGCGGCCAGCCCTGGCAGCCAGGACTTCCTGTATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAAGCGAGCAGGTTCTCTaGCATTGTCAGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQSEQVL*HCQPAG
Trigger: TCCTGCTGGCTGACAATGTCAGAGAACCTGCTCGCT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTGCGGCTGTTCTGCTTaGTGGTGTTGGCGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVCGCSA*WCWRRA
Trigger: AGCTCTCCGCCAACACCATCAAGCAGAACAGCCGCA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCATAGTACTTGGTGCGTaGATACTCGCTCTCGAACAC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSIVLGA*ILALEH
Trigger: GTGTTCGAGAGCGAGTATTCACGCACCAAGTACTAT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAATAGTACTTGGTGCGTaGATACTCGCTCTCGAACAC +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEIVLGA*ILALEH
Trigger: GTGTTCGAGAGCGAGTATTCACGCACCAAGTACTAT...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGACTCCTGTGCCTGCCAGTCCCCGAGGAGCTCCTCACCCCACAGCTTCTTCCAATAGTACTTGGTGCGTaGATACTCGCTCTCGAACAC +
Preference number: 4 (lower is better)
Translates to: GLLCLPVPEELLTPQLLPIVLGA*ILALEH
Trigger: GTGTTCGAGAGCGAGTATTCACGCACCAAGTACTAT...TGGAAGAAGCTGTGGGGTGAGGAGCTCCTCGGGGACTGGCAGGCACAGGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGTTACTTCGCATGGCTaGGGTCTTAAGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGVTSHG*GLKGAV
Trigger: CACGGCTCCCTTAAGACCTCAGCCATGCGAAGTAAC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGGGGCGAGGAGGGATTaGAGCCCACGGACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMGARRD*SPRTLQ
Trigger: TTGCAGAGTCCGTGGGCTTCAATCCCTCCTCGCCCC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAGGGGCGAGGAGGGATTaGAGCCCACGGACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSGARRD*SPRTLQ
Trigger: TTGCAGAGTCCGTGGGCTTCAATCCCTCCTCGCCCC...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCCTGCAGCGGGTCCTTaGACCATGCACCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKPAAGP*TMHQTD
Trigger: ATCAGTCTGGTGCATGGTGCAAGGACCCGCTGCAGG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000045393.15
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGATACGGTCACCTGCCTaGAGCGGGTCCTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKIRSPA*SGSLHH
Trigger: ATGGTGCAAGGACCCGCTGCAGGCAGGTGACCGTAT...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000045393.15
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAATACGGTCACCTGCCTaGAGCGGGTCCTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASIRSPA*SGSLHH
Trigger: ATGGTGCAAGGACCCGCTGCAGGCAGGTGACCGTAT...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000045393.15
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGTAGATACGGTCACCTaGCTGCAGCGGGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVVDTVT*LQRVLA
Trigger: TGCAAGGACCCGCTGCAGGCAGGTGACCGTATCTAC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000045393.15
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CACTTGGGGACCTGCCATGTAGCTCTGAGGCCTAGAAGCAAGTTGCTCCCTGTGGTAGATACGGTCACCTaGCTGCAGCGGGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: HLGTCHVALRPRSKLLPVVDTVT*LQRVLA
Trigger: TGCAAGGACCCGCTGCAGGCAGGTGACCGTATCTAC...CACAGGGAGCAACTTGCTTCTAGGCCTCAGAGCTACATGGCAGGTCCCCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGTAGATACGGTCACCTaGCTGCAGCGGGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKVDTVT*LQRVLA
Trigger: TGCAAGGACCCGCTGCAGGCAGGTGACCGTATCTAC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000045393.15
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCATTGTTGCCCTCAGTTaGATAGATGACCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSIVALS*IDDPQS
Trigger: GGACTGTGGGTCATCTATGCAACTGAGGGCAACAAT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGTGGAGTGGTGGCTaGAGGCGAGGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMEWSGG*RRGCAG
Trigger: ACCAGCACAGCCTCGCCTGCAGCCACCACTCCACTC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAGAGTGGAGTGGTGGCTaGAGGCGAGGCTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSEWSGG*RRGCAG
Trigger: ACCAGCACAGCCTCGCCTGCAGCCACCACTCCACTC...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCACCTTCGGGTACTGGGTaGTGGAGCTGTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSPSGTG*WSCGWR
Trigger: CCTCCAGCCACAGCTCCAGCACCCAGTACCCGAAGG...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCTAGGCCAGCCACTCCATACAGCCACAGCAAAGTCCAGATCCAGTTAAGTCAGCCTTCGGGTACTGGGTaGTGGAGCTGTGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PRPATPYSHSKVQIQLSQPSGTG*WSCGWR
Trigger: CCTCCAGCCACAGCTCCAGCACCCAGTACCCGAAGG...CTGACTTAACTGGATCTGGACTTTGCTGTGGCTGTATGGAGTGGCTGGCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACCGTTGCGGCTGTTCTaGTTGATGGTGTTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLPLRLF*LMVLAE
Trigger: CTCCGCCAACACCATCAAGCAGAACAGCCGCAACGG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAACCGTTGCGGCTGTTCTaGTTGATGGTGTTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: VKSCSGGSHPGWDVHIQEPLRLF*LMVLAE
Trigger: CTCCGCCAACACCATCAAGCAGAACAGCCGCAACGG...TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCCGTTGCGGCTGTTCTaGTTGATGGTGTTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKPLRLF*LMVLAE
Trigger: CTCCGCCAACACCATCAAGCAGAACAGCCGCAACGG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCGTGAGCCATGAGCACTaGGAAGTTGGTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGVSHEH*EVGEVA
Trigger: AGCCACCTCACCAACTTCGCAGTGCTCATGGCTCAC...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTGGCTCCTAGGCCAGCCACTCCATACAGCCACAGCAAAGTCCAGATCCAGTTAGTAGTCAATGGCTGCTaGGATGCCGACCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: LAPRPATPYSHSKVQIQLVVNGC*DADHQG
Trigger: GCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTAC...TAACTGGATCTGGACTTTGCTGTGGCTGTATGGAGTGGCTGGCCTAGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTCGGTAGTCAATGGCTaGTGCGATGCCGACCACCAG +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVSVVNG*CDADHQ
Trigger: CTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGCTGTTGATGTCACCTaGCATAAAGGAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSAVDVT*HKGGLC
Trigger: ACAGAGTCCTCCTTTATGGCAGGTGACATCAACAGC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCTGTTGATGTCACCTaGCATAAAGGAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEAVDVT*HKGGLC
Trigger: ACAGAGTCCTCCTTTATGGCAGGTGACATCAACAGC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGTGGCAGGGTGTCCATaGCACAGGCTTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEVAGCP*HRLPGL
Trigger: GAGGCCGGGAAGCCTGTGGCATGGACACCCTGCCAC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCACTCGAGGCTGGGGGCTaGCAGGTAGCCTTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSLEAGG*QVAFMA
Trigger: AGCCATGAAGGCTACCTGGCAGCCCCCAGCCTCGAG...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTGGCTCCTAGGCCAGCCACTCCATACAGCCACAGCAAAGTCCAGATCCAGTTAGTGACCAACTGCATTTaGCCGTCCCCATCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LAPRPATPYSHSKVQIQLVTNCI*PSPSGP
Trigger: AGGGCCCGATGGGGACGGGCAAATGCAGTTGGTCAC...TAACTGGATCTGGACTTTGCTGTGGCTGTATGGAGTGGCTGGCCTAGGAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAGCGCATCAACCCAAATaGGAGCCCAGCCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSAHQPK*EPSPAQ
Trigger: CTGAGCCGGGCTGGGCTCCCATTTGGGTTGATGCGC...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCTTCTGCAGGGTCCCTaGGCACACGAAGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGLLQGP*AHEDFL
Trigger: CAGAAAGTCTTCGTGTGCCCAGGGACCCTGCAGAAG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045393.15
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTCCTCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTTGGGCAGTCTGTACGTaGTGGTGTGGCGTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: LLTPQLLPALLVSDGLGPWAVCT*WCGVRL
Trigger: TAGCCGCACGCCACACCACCACGTACAGACTGCCCA...AGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGAGGTCAGGTCCCAGCTaGTTGATGGCACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQRSGPS*LMAPTG
Trigger: CCCAGTGGGTGCCATCAACCAGCTGGGACCTGACCT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAGGGACACATGCAGATTaGGGGCTGGAGGCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSGTHAD*GLEAFG
Trigger: CCCGAAGGCCTCCAGCCCCCAATCTGCATGTGTCCC...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGGGACACATGCAGATTaGGGGCTGGAGGCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMGTHAD*GLEAFG
Trigger: CCCGAAGGCCTCCAGCCCCCAATCTGCATGTGTCCC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTCCTCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTCCCGCCGGACCTCTCTaGGTTCACAGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLTPQLLPALLVSDGLGPPAGPL*VHRRAQ
Trigger: CTGAGCTCTTCTGTGAACCCAGAGAGGTCCGGCGGG...AGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGACCAGCATACCCTGTTaGGTAGCTGGCCACTGGACC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVTSIPC*VAGHWT
Trigger: GGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGT...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTTTCCTCGAGTTCCCTTaGGGCAAGGTCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPFLEFP*GKVSPP
Trigger: TGGTGGAGAGACCTTGCCCCAAGGGAACTCGAGGAA...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCGTAGGGCCTGGAGCTaGGCATCCAGGATATCTAGC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVRRAWS*ASRISS
Trigger: GCTAGATATCCTGGATGCCCAGCTCCAGGCCCTACG...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCGTAGGGCCTGGAGCTaGGCATCCAGGATATCTAGC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKRRAWS*ASRISS
Trigger: GCTAGATATCCTGGATGCCCAGCTCCAGGCCCTACG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCATCTAGAAGCATGGTaGCTGTATGAACCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSHLEAW*LYEPVR
Trigger: CCGAACAGGTTCATACAGCCACCATGCTTCTAGATG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCACCAACTCCTGCACTTaGCCCTCCGTGTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGTNSCT*PSVFST
Trigger: TGTGCTGAACACGGAGGGCCAAGTGCAGGAGTTGGT...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTACCAACTCCTGCACTTaGCCCTCCGTGTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPTNSCT*PSVFST
Trigger: TGTGCTGAACACGGAGGGCCAAGTGCAGGAGTTGGT...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACTGTGGCATTCTCCGTaGACAAGAAGAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQLWHSP*TRRGPG
Trigger: ACCTGGGCCTCTTCTTGTCCACGGAGAATGCCACAG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCATGCACAGATTCTTGTaGATGGTGTTGCGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSMHRFL*MVLRSV
Trigger: GACTGACCGCAACACCATCCACAAGAATCTGTGCAT...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCAGCTTCGGTAGTCAATaGCTGCTGCGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGSFGSQ*LLRCRP
Trigger: TGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCT...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAGCTGTAGCACGGGGTTaGTCAGTAGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASAVARG*SVGGSP
Trigger: TGGGGAACCACCTACTGACCAACCCCGTGCTACAGC...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGCTGTAGCACGGGGTTaGTCAGTAGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLAVARG*SVGGSP
Trigger: TGGGGAACCACCTACTGACCAACCCCGTGCTACAGC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTCCTCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTCACAGGTGGCACAGGTaGCTCTGGTGGAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LLTPQLLPALLVSDGLGPHRWHR*LWWRPF
Trigger: AAAGGGCCTCCACCAGAGCCACCTGTGCCACCTGTG...AGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGTCCTCACTGACCCCTaGCACAGGTGGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMVLTDP*HRWHRW
Trigger: CCACCTGTGCCACCTGTGCCAGGGGTCAGTGAGGAC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAGGTAGCCTTCATGGCTaGGCCGCCGCACCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSGSLHG*AAAPGS
Trigger: ACTACCAGGTGCGGCGGCCCAGCCATGAAGGCTACC...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCTTCTGCAGGGTCCCTaGGCACACGAAGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGLLQGP*AHEDVR
Trigger: CCTTACATCTTCGTGTGCCCAGGGACCCTGCAGAAG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000132500.8
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGCCCAGAGAGACCTGGTaGATATGCCTTCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQPRETW*ICLPCP
Trigger: CGGGCAGGGAAGGCATATCCACCAGGTCTCTCTGGG...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000132500.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTACTCCTGCCTCTTaGCCCCAGAGAGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKSTPAS*PQRDLV
Trigger: CACCAGGTCTCTCTGGGGCCAAGAGGCAGGAGTACT...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000132500.8
ENSMUST00000152978.8
3UTR CAA 72 bp GGGAGGCACTGGAATGAGGCAATTCCTCGAGTTCCCTaGGGGCAAGGTCTCTCCACCAGCATACCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GRHWNEAIPRVP*GQGLSTSIPCW
Trigger: CCAACAGGGTATGCTGGTGGAGAGACCTTGCCCCAAGGGAACTCGAGGAATTGCCTCATTCCAGTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 72 bp GGCGGAGAGCTGAATGGAGTTCTCACTGGGATACTCTaGGGGGAACACCAACTCCTGCACTTGGCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: GGELNGVLTGIL*GEHQLLHLALR
Trigger: ACGGAGGGCCAAGTGCAGGAGTTGGTGTTCCCCCAAGAGTATCCCAGTGAGAACTCCATTCAGCTCTCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 72 bp GGCCCTTTGGCACCCCCACTGGCCCCTCGCAGGTTGTaGTGCACCAGCTCTGAGATGATCATCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GPLAPPLAPRRL*CTSSEMIIFSK
Trigger: CTTTGAGAAGATGATCATCTCAGAGCTGGTGCACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
CDS-3UTR TCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGCTTGGGTGGCAGAGGTaGCAAGGACAGTCGTCACAC +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQLGWQR*QGQSSH
Trigger: GTGTGACGACTGTCCTTGTCACCTCTGCCACCCAAG...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCACAGTTTCCCCGCTCTTaGTGCGGGTCCGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSQFPRS*CGSAGH
Trigger: ATGACCTGCGGACCCGCATCAAGAGCGGGGAAACTG...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGGTTCGCATTGGTGTTaGAGGCATAGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVGSHWC*RHSPRG
Trigger: ACCGCGTGGACTATGCCTTCAACACCAATGCGAACC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCTGTGGTGGTGGTACTaGGAGGCGGGGAAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMELWWWY*EAGKWL
Trigger: CAGCCACTTCCCCGCCTCTCAGTACCACCACCACAG...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCAGGTCCCAGCTGGTTaGTGGCACCCACTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEQVPAG*WHPLGV
Trigger: CACACCCAGTGGGTGCCATCAACCAGCTGGGACCTG...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGAAGTGCAGTTGCTaGGGTCAGGGCCCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMEKCSC*GQGPED
Trigger: ATCCTCGGGGCCCTGACCTCAGCAACTGCACTTCTC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGGTAGTTCTTGCCGGCTaGCTCTCGTTCAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQVVLAG*LSFNGP
Trigger: CGGCCCATTGAACGAGAGTCAGCCGGCAAGAACTAC...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTCCTCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTGTAGTTCTTGCCGGCTaGCTCTCGTTCAATGGGCCG +
Preference number: 4 (lower is better)
Translates to: LLTPQLLPALLVSDGLGPVVLAG*LSFNGP
Trigger: CGGCCCATTGAACGAGAGTCAGCCGGCAAGAACTAC...AGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCTCTCCACCACAGCCTTaGTGTAGTCCTTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGSPPQP*CSPCRF
Trigger: GAACCTGCAAGGACTACATCAAGGCTGTGGTGGAGA...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTGGGCAGCGAGCAGGTTCTCTaGCATTGTCAGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPHSFFQLYWCLMALGLGSEQVL*HCQPAG
Trigger: TCCTGCTGGCTGACAATGTCAGAGAACCTGCTCGCT...GCCCAGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGTGCGGCTGTTCTGCTTaGTGGTGTTGGCGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQCGCSA*WCWRRA
Trigger: AGCTCTCCGCCAACACCATCAAGCAGAACAGCCGCA...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGTTACTTCGCATGGCTaGGGTCTTAAGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKVTSHG*GLKGAV
Trigger: CACGGCTCCCTTAAGACCTCAGCCATGCGAAGTAAC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGTTACTTCGCATGGCTaGGGTCTTAAGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLVTSHG*GLKGAV
Trigger: CACGGCTCCCTTAAGACCTCAGCCATGCGAAGTAAC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCGTTGTGCACCAGCTCTaGGATGATCATCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSVVHQL*DDHLLK
Trigger: TTTGAGAAGATGATCATCTCAGAGCTGGTGCACAAC...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGATACGGTCACCTGCCTaGAGCGGGTCCTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQIRSPA*SGSLHH
Trigger: ATGGTGCAAGGACCCGCTGCAGGCAGGTGACCGTAT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000045393.15
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp ACTACACTACAGCCTGCCCTCCATAGCCCACATTTGGAGAAGGGCTGTATAGGAGTCCACGCGGTTGCCTaGGGCCTCGCTATCATCGTC +
Preference number: 4 (lower is better)
Translates to: TTLQPALHSPHLEKGCIGVHAVA*GLAIIV
Trigger: GACGATGATAGCGAGGCCGCAGGCAACCGCGTGGAC...TCCTATACAGCCCTTCTCCAAATGTGGGCTATGGAGGGCAGGCTGTAGTGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGCCGTTGCGGCTGTTCTaGTTGATGGTGTTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQPLRLF*LMVLAE
Trigger: CTCCGCCAACACCATCAAGCAGAACAGCCGCAACGG...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGTGAGCCATGAGCACTaGGAAGTTGGTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWVSHEH*EVGEVA
Trigger: AGCCACCTCACCAACTTCGCAGTGCTCATGGCTCAC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAGTAGTCAATGGCTGCTaGGATGCCGACCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSVVNGC*DADHQG
Trigger: GCCCTGGTGGTCGGCATCGCAGCAGCCATTGACTAC...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGTCGGTAGTCAATGGCTaGTGCGATGCCGACCACCAG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQSVVNG*CDADHQ
Trigger: CTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGA...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCTTGCTGTACTCCTTGTaGACCTTTTTCTGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSLLYSL*TFFCKA
Trigger: CGCCTTACAGAAAAAGGTGCACAAGGAGTACAGCAA...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAAGTGACGCAGGCACTTaGTGTACTCCTTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQSDAGT*CTPCAP
Trigger: AGGTGCACAAGGAGTACAGCAAGTGCCTGCGTCACT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCACAGGTGGGGAGCGGATaGAGCAGTAGGAGTGACGCA +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSQVGSG*SSRSDA
Trigger: TGCGTCACTCCTACTGCTGCATCCGCTCCCCACCTG...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACCTCGCAGGTTGTTGTaGACCAGCTCTGAGATGATC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQPRRLL*TSSEMI
Trigger: GATCATCTCAGAGCTGGTGCACAACAACCTGCGAGG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTCCTCGCAGGTTGTTGTaGACCAGCTCTGAGATGATC +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPPRRLL*TSSEMI
Trigger: GATCATCTCAGAGCTGGTGCACAACAACCTGCGAGG...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGAGAAGTTCAATCTCTaGCCGGTCAGCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWEKFNL*PVSTPW
Trigger: CCAGGGAGTGCTGACCGGGCAGAGATTGAACTTCTC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGAGAAGTTCAATCTCTaGCCGGTCAGCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKEKFNL*PVSTPW
Trigger: CCAGGGAGTGCTGACCGGGCAGAGATTGAACTTCTC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGGTGGCCCCATCCTCTaGCGTACAGCTCTCCGACTC +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEGGPIL*RTALRL
Trigger: GAGTCGGAGAGCTGTACGGCAGAGGATGGGGCCACC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTAGACTAGTGACCAACTaGATTTGCCCGTCCCCATCG +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPRLVTN*ICPSPS
Trigger: CGATGGGGACGGGCAAATGCAGTTGGTCACTAGTCT...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAAGACTAGTGACCAACTaGATTTGCCCGTCCCCATCG +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQRLVTN*ICPSPS
Trigger: CGATGGGGACGGGCAAATGCAGTTGGTCACTAGTCT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGCGCATCAACCCAAATaGGAGCCCAGCCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEAHQPK*EPSPAQ
Trigger: CTGAGCCGGGCTGGGCTCCCATTTGGGTTGATGCGC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGTGGCTGGGCCAGCACTaGGATCTGGGGGTCCAAACT +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMWLGQH*DLGVQT
Trigger: AGTTTGGACCCCCAGATCCCAGTGCTGGCCCAGCCA...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGAGGTCAGGTCCCAGCTaGTTGATGGCACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMRSGPS*LMAPTG
Trigger: CCCAGTGGGTGCCATCAACCAGCTGGGACCTGACCT...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp ACTACACTACAGCCTGCCCTCCATAGCCCACATTTGGAGAAGGGCTGTATAGGATGCTGGAGCTGTGGCTaGAGGCAGGTCAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TTLQPALHSPHLEKGCIGCWSCG*RQVRSQ
Trigger: CTGGGACCTGACCTGCCTCCAGCCACAGCTCCAGCA...TCCTATACAGCCCTTCTCCAAATGTGGGCTATGGAGGGCAGGCTGTAGTGTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCACCCGCCGGACCTCTCTaGGTTCACAGAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSPAGPL*VHRRAQ
Trigger: CTGAGCTCTTCTGTGAACCCAGAGAGGTCCGGCGGG...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGACCAGCATACCCTGTTaGGTAGCTGGCCACTGGACC +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQTSIPC*VAGHWT
Trigger: GGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTTCCTCGAGTTCCCTTaGGGCAAGGTCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWFLEFP*GKVSPP
Trigger: TGGTGGAGAGACCTTGCCCCAAGGGAACTCGAGGAA...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGTTCCTCGAGTTCCCTTaGGGCAAGGTCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKFLEFP*GKVSPP
Trigger: TGGTGGAGAGACCTTGCCCCAAGGGAACTCGAGGAA...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGACCAACTCCTGCACTTaGCCCTCCGTGTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKTNSCT*PSVFST
Trigger: TGTGCTGAACACGGAGGGCCAAGTGCAGGAGTTGGT...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCTCACTGGGATACTCTTaGGGGAACACCAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGSLGYS*GNTNSC
Trigger: GCAGGAGTTGGTGTTCCCCCAAGAGTATCCCAGTGA...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCTGTGGCATTCTCCGTaGACAAGAAGAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKLWHSP*TRRGPG
Trigger: ACCTGGGCCTCTTCTTGTCCACGGAGAATGCCACAG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAAGCTTCGGTAGTCAATaGCTGCTGCGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLSFGSQ*LLRCRP
Trigger: TGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCT...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGAGCTTCGGTAGTCAATaGCTGCTGCGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWSFGSQ*LLRCRP
Trigger: TGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCT...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAAGCTTCGGTAGTCAATaGCTGCTGCGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASSFGSQ*LLRCRP
Trigger: TGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCT...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGGGGTTGGTCAGTAGGTaGTTCCCCATGGTACCTCGG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQGLVSR*FPMVPR
Trigger: CCGAGGTACCATGGGGAACCACCTACTGACCAACCC...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGAAGTTGCCGTTAAGTaGCAGGGTGTCCATGCCACA +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPEVAVK*QGVHAT
Trigger: TGTGGCATGGACACCCTGCCACTTAACGGCAACTTC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCACTTTGGCACCCCCACTaGCCCCTCGCAGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSLWHPH*PLAGCC
Trigger: ACAACAACCTGCGAGGGGCCAGTGGGGGTGCCAAAG...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGCACAGGTGGCACAGGTaGCTCTGGTGGAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMHRWHR*LWWRPF
Trigger: AAAGGGCCTCCACCAGAGCCACCTGTGCCACCTGTG...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGTCATCCAGATCACTCTaGTACAGCACCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKSSRSL*YSTDWA
Trigger: GGCCCAGTCGGTGCTGTACCAGAGTGATCTGGATGA...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTCATCCAGATCACTCTaGTACAGCACCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVSSRSL*YSTDWA
Trigger: GGCCCAGTCGGTGCTGTACCAGAGTGATCTGGATGA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCAGATCCAGTTAAGTCAGGCAAGGGCTATGAGCCATTTCATGCTCTCTTCACAGCGAGTCCCGCAGGTTaGCCCCGCTGGCATAGAGGG +
Preference number: 4 (lower is better)
Translates to: PDPVKSGKGYEPFHALFTASPAG*PRWHRG
Trigger: CCCTCTATGCCAGCGGGGCCAACCTGCGGGACTCGC...TGTGAAGAGAGCATGAAATGGCTCATAGCCCTTGCCTGACTTAACTGGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAGGTGTAGTAGATTTCTaGGGGCCCAGGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSGVVDF*GPRGSR
Trigger: CCTGCTCCCCCTGGGCCCCCAGAAATCTACTACACC...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACTTCTGCAGGGTCCCTaGGCACACGAAGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLLLQGP*AHEDVR
Trigger: CCTTACATCTTCGTGTGCCCAGGGACCCTGCAGAAG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000132500.8
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGCCCAGAGAGACCTGGTaGATATGCCTTCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMPRETW*ICLPCP
Trigger: CGGGCAGGGAAGGCATATCCACCAGGTCTCTCTGGG...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000132500.8
ENSMUST00000152978.8
3UTR CAA 72 bp ACTGGGATACTCTTGGGGGAACACCAACTCCTGCACTaGGCCCTCCGTGTTCAGCACAGTTACCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TGILLGEHQLLH*ALRVQHSYLQD
Trigger: GTCCTGGAGGTAACTGTGCTGAACACGGAGGGCCAAGTGCAGGAGTTGGTGTTCCCCCAAGAGTATCCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 72 bp GACTCCTTATTGATAGATGCTGCGATGACCTGTGAGTaGACCACCAGGGAGGCACCTCCAGGGCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: DSLLIDAAMTCE*TTREAPPGPPV
Trigger: GACAGGTGGCCCTGGAGGTGCCTCCCTGGTGGTCAACTCACAGGTCATCGCAGCATCTATCAATAAGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 72 bp GAGGGATTGAAGCCCACGGACTCTGCAATGAGTGTATaGTATGGGCTAGTGCCCCCACGAGGCTGTAGCACG +
Preference number: 4 (lower is better)
Translates to: EGLKPTDSAMSV*YGLVPPRGCST
Trigger: CGTGCTACAGCCTCGTGGGGGCACTAGCCCATACAATACACTCATTGCAGAGTCCGTGGGCTTCAATCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 72 bp GAGGAGCTCCTCACCCCACAGCTTCTTCCAGCTTTATaGGTGTCTGATGGCCTTGGGCCTGGGCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: EELLTPQLLPAL*VSDGLGPGLSQ
Trigger: TTGACTCAGCCCAGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAGCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp ACTACACTACAGCCTGCCCTCCATAGCCCACATTTGGAGAAGGGCTGTATAGGACAGTTTCCCCGCTCTTaGTGCGGGTCCGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: TTLQPALHSPHLEKGCIGQFPRS*CGSAGH
Trigger: ATGACCTGCGGACCCGCATCAAGAGCGGGGAAACTG...TCCTATACAGCCCTTCTCCAAATGTGGGCTATGGAGGGCAGGCTGTAGTGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGCAACGTGTAGGGGTTaGGCTGGCTTACCACCAAGC +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMATCRG*AGLPPS
Trigger: GCTTGGTGGTAAGCCAGCTCAACCCCTACACGTTGC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGTTCCATCAGCTTCACTaGGGAGGACACGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMFHQLH*GGHVPS
Trigger: GCTGGGGACGTGTCCTCCTCAGTGAAGCTGATGGAA...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGCATGGTGGCTGTATaGACCTGTTCGGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKSMVAV*TCSVAF
Trigger: GAATGCCACCGAACAGGTTCATACAGCCACCATGCT...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCATGCGGCTGTTCTGCTTaGTGGTGTTGGCGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSCGCSA*WCWRRA
Trigger: AGCTCTCCGCCAACACCATCAAGCAGAACAGCCGCA...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGTGCGGCTGTTCTGCTTaGTGGTGTTGGCGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMCGCSA*WCWRRA
Trigger: AGCTCTCCGCCAACACCATCAAGCAGAACAGCCGCA...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGGTTGTTGTAGAGAATaGAGACAACTTTCACCACAC +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEGCCRE*RQLSPH
Trigger: GTGTGGTGAAAGTTGTCTTCATTCTCTACAACAACC...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCGCAAGGAAGAGGTTaGTGCACAGATTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGPQGRG*CTDSCG
Trigger: TCCACAAGAATCTGTGCATCAACCTCTTCCTTGCGG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAATAGGCCATGACTACTaGCTCTTTGTTGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEIGHDY*LFVDEE
Trigger: CTCTTCATCAACAAAGAGTCAGTAGTCATGGCCTAT...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAAGTGAAAGACAAAGATaGAGACCCCCTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQSERQR*RPPGRR
Trigger: ACGCCTTCCAGGGGGTCTTCATCTTTGTCTTTCACT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGGTTACTTCGCATGGCTaGGGTCTTAAGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQVTSHG*GLKGAV
Trigger: CACGGCTCCCTTAAGACCTCAGCCATGCGAAGTAAC...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTCCAGGATCTTTCTaGGATTCTGGCAGAGTACTC +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGPPGSF*DSGRVL
Trigger: GAGTACTCTGCCAGAATCTCAGAAAGATCCTGGAGG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000132500.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACCTCCAGGATCTTTCTaGGATTCTGGCAGAGTACTC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQPPGSF*DSGRVL
Trigger: GAGTACTCTGCCAGAATCTCAGAAAGATCCTGGAGG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000132500.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTTGTGCGCCCGTAGTTTaGATTCTCCACCATGATGAC +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPCAPVV*ILHHDD
Trigger: GTCATCATGGTGGAGAATGCAAACTACGGGCGCACA...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGTAGATACGGTCACCTaGCTGCAGCGGGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMVDTVT*LQRVLA
Trigger: TGCAAGGACCCGCTGCAGGCAGGTGACCGTATCTAC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000045393.15
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCACAGTCAATGTGTCCGTaGGGTAGGGGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSQSMCP*GRGSRA
Trigger: TGCCCTGGATCCCCTACCGCACGGACACATTGACTG...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGCAGTCAATGTGTCCGTaGGGTAGGGGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMQSMCP*GRGSRA
Trigger: TGCCCTGGATCCCCTACCGCACGGACACATTGACTG...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCGTGGTGGTGTGGCGTaGGGCTACATAGTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMERGGVA*GYIVLP
Trigger: TGGGAGGACTATGTAGCCGCACGCCACACCACCACG...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGAGACCACAAAGCCAGTaGCATCTACACGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWRPQSQ*HLHGWA
Trigger: TGCCCAACCGTGTAGATGGCACTGGCTTTGTGGTCT...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAAGACCACAAAGCCAGTaGCATCTACACGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASRPQSQ*HLHGWA
Trigger: TGCCCAACCGTGTAGATGGCACTGGCTTTGTGGTCT...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGGTGAGCCATGAGCACTaGGAAGTTGGTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQVSHEH*EVGEVA
Trigger: AGCCACCTCACCAACTTCGCAGTGCTCATGGCTCAC...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGTCGGTAGTCAATGGCTaGTGCGATGCCGACCACCAG +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMSVVNG*CDADHQ
Trigger: CTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGA...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGAGTGACGCAGGCACTTaGTGTACTCCTTGTGCACCT +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVSDAGT*CTPCAP
Trigger: AGGTGCACAAGGAGTACAGCAAGTGCCTGCGTCACT...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTAAGGAGGACTCTGTCTaGTTCCTCACGGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPKEDSV*FLTVSF
Trigger: GAATGACACCGTGAGGAAGCAGACAGAGTCCTCCTT...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACCTCGCAGGTTGTTGTaGACCAGCTCTGAGATGATC +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASPRRLL*TSSEMI
Trigger: GATCATCTCAGAGCTGGTGCACAACAACCTGCGAGG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACCTCGCAGGTTGTTGTaGACCAGCTCTGAGATGATC +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLPRRLL*TSSEMI
Trigger: GATCATCTCAGAGCTGGTGCACAACAACCTGCGAGG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTGGCTCCTAGGCCAGCCACTCCATACAGCCACAGCAAAGTCCAGATCCAGTTAGAGAAGTTCAATCTCTaGCCGGTCAGCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LAPRPATPYSHSKVQIQLEKFNL*PVSTPW
Trigger: CCAGGGAGTGCTGACCGGGCAGAGATTGAACTTCTC...TAACTGGATCTGGACTTTGCTGTGGCTGTATGGAGTGGCTGGCCTAGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAAGACTAGTGACCAACTaGATTTGCCCGTCCCCATCG +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASRLVTN*ICPSPS
Trigger: CGATGGGGACGGGCAAATGCAGTTGGTCACTAGTCT...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTGGGCAGACTAGTGACCAACTaGATTTGCCCGTCCCCATCG +
Preference number: 4 (lower is better)
Translates to: SPHSFFQLYWCLMALGLGRLVTN*ICPSPS
Trigger: CGATGGGGACGGGCAAATGCAGTTGGTCACTAGTCT...GCCCAGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTATGCACATTCTCCATCTaGAAAGGGTCGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLCTFSI*KGSASQ
Trigger: CTGCGATGCCGACCCTTTCCAGATGGAGAATGTGCA...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCATGCACATTCTCCATCTaGAAAGGGTCGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASCTFSI*KGSASQ
Trigger: CTGCGATGCCGACCCTTTCCAGATGGAGAATGTGCA...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGCACATTCTCCATCTaGAAAGGGTCGGCATCGCAG +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWCTFSI*KGSASQ
Trigger: CTGCGATGCCGACCCTTTCCAGATGGAGAATGTGCA...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGTGGCTGGGCCAGCACTaGGATCTGGGGGTCCAAACT +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEWLGQH*DLGVQT
Trigger: AGTTTGGACCCCCAGATCCCAGTGCTGGCCCAGCCA...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGTTGATGGCACCCACTaGGTGTGTGGTGAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEVDGTH*VCGEGC
Trigger: GCACCCCTCACCACACACCCAGTGGGTGCCATCAAC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGATGCAGATTGGGGGCTaGAGGCCTTCGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEMQIGG*RPSGTG
Trigger: CCCAGTACCCGAAGGCCTCCAGCCCCCAATCTGCAT...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGTTCCTCGAGTTCCCTTaGGGCAAGGTCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQFLEFP*GKVSPP
Trigger: TGGTGGAGAGACCTTGCCCCAAGGGAACTCGAGGAA...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAAGAGCTGGGAGGCACTaGAATGAGGCAATTCCTCGA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASRAGRH*NEAIPR
Trigger: TCGAGGAATTGCCTCATTCCAGTGCCTCCCAGCTCT...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCATCTTCTGGGCTACTTaGTTGACCCAGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGIFWAT*LTQGEV
Trigger: CACTTCTCCCTGGGTCAACCAAGTAGCCCAGAAGAT...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGGCGGGCCAGCTCACTaGCAATGTTGGCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEGGPAH*QCWPHS
Trigger: AGAATGCGGCCAACATTGCCAGTGAGCTGGCCCGCC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCACGTAGGGCCTGGAGCTaGGCATCCAGGATATCTAGC +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSRRAWS*ASRISS
Trigger: GCTAGATATCCTGGATGCCCAGCTCCAGGCCCTACG...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAATATGAACCTGTTCGGTaGCATTCATGTCTTTCCATG +
Preference number: 4 (lower is better)
Translates to: APAPGPGLSRGIRPSLQEYEPVR*HSCLSM
Trigger: CATGGAAAGACATGAATGCCACCGAACAGGTTCATA...TTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTCACTGGGATACTCTTaGGGGAACACCAACTCCTGC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVSLGYS*GNTNSC
Trigger: GCAGGAGTTGGTGTTCCCCCAAGAGTATCCCAGTGA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAATGGCGGAGAGCTGAATaGAGTTCTCACTGGGATACT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQWRRAE*SSHWDT
Trigger: AGTATCCCAGTGAGAACTCCATTCAGCTCTCCGCCA...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACTGCCAGCTTCACTGTaGCATTCTCCGTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASLPASL*HSPWTR
Trigger: TCTTGTCCACGGAGAATGCCACAGTGAAGCTGGCAG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACTGCCAGCTTCACTGTaGCATTCTCCGTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLLPASL*HSPWTR
Trigger: TCTTGTCCACGGAGAATGCCACAGTGAAGCTGGCAG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACAGGCACATGTGGTATaGGTCTTATTGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQQAHVV*VLLDST
Trigger: GGTGGAGTCCAATAAGACCCATACCACATGTGCCTG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCAGCCCCTGGGCCTGGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCCTAGGTAATAGTACTTaGTGCGTGAATACTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PSPWAWAFSWYKAQSPGSLGNST*CVNTRS
Trigger: AGAGCGAGTATTCACGCACCAAGTACTATTACCTAG...GCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCCAGGCCCAGGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAGGGTTGGTCAGTAGGTaGTTCCCCATGGTACCTCGG +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSGLVSR*FPMVPR
Trigger: CCGAGGTACCATGGGGAACCACCTACTGACCAACCC...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGAAGTTGCCGTTAAGTaGCAGGGTGTCCATGCCACA +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLEVAVK*QGVHAT
Trigger: TGTGGCATGGACACCCTGCCACTTAACGGCAACTTC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGGTGTAGTAGATTTCTaGGGGCCCAGGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEGVVDF*GPRGSR
Trigger: CCTGCTCCCCCTGGGCCCCCAGAAATCTACTACACC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGAGTACTCCTGCCTCTTaGCCCCAGAGAGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMSTPAS*PQRDLV
Trigger: CACCAGGTCTCTCTGGGGCCAAGAGGCAGGAGTACT...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000132500.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGCACCATGCACCAGACTaGTGCTCTGACTCATGTGTA +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWHHAPD*CSDSCV
Trigger: TACACATGAGTCAGAGCATCAGTCTGGTGCATGGTG...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000045393.15
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCCTCAGTTGCATAGATaGCCCACAGTCCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKPQLHR*PTVRSH
Trigger: ATGAGAACGGACTGTGGGTCATCTATGCAACTGAGG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACATTCTCTCCACTCTTaGTCTTCTGGGCTACTTGGT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQHSLHS*SSGLLG
Trigger: ACCAAGTAGCCCAGAAGATCAAGAGTGGAGAGAATG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGAGGAGCAGTTTGCATTaGAGTGGTTCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVRSSLH*SGSWPP
Trigger: TGGAGGCCAAGAACCACTTCAATGCAAACTGCTCCT...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCAACCCAGGTGATGACTaGCAGCAGCAGCTCATTAAT +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGNPGDD*QQQLIN
Trigger: ATTAATGAGCTGCTGCTGTCAGTCATCACCTGGGTT...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAAACCCAGGTGATGACTaGCAGCAGCAGCTCATTAAT +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQNPGDD*QQQLIN
Trigger: ATTAATGAGCTGCTGCTGTCAGTCATCACCTGGGTT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCACCGCAAGGAAGAGGTTaGTGCACAGATTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASPQGRG*CTDSCG
Trigger: TCCACAAGAATCTGTGCATCAACCTCTTCCTTGCGG...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAATAGTACTTGGTGCGTaGATACTCGCTCTCGAACAC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQIVLGA*ILALEH
Trigger: GTGTTCGAGAGCGAGTATTCACGCACCAAGTACTAT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGTGTGCGCCCGTAGTTTaGATTCTCCACCATGATGAC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVCAPVV*ILHHDD
Trigger: GTCATCATGGTGGAGAATGCAAACTACGGGCGCACA...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCATGTGCGCCCGTAGTTTaGATTCTCCACCATGATGAC +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASCAPVV*ILHHDD
Trigger: GTCATCATGGTGGAGAATGCAAACTACGGGCGCACA...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000124355.8
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCCTGCAGCGGGTCCTTaGACCATGCACCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEPAAGP*TMHQTD
Trigger: ATCAGTCTGGTGCATGGTGCAAGGACCCGCTGCAGG...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000045393.15
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CATAGCCCACATTTGGAGAAGGGCTGTATAGGAAGAAAGGACGCAGGACTCCTGCCTGCAGCGGGTCCTTaGACCATGCACCAGACTGAT +
Preference number: 4 (lower is better)
Translates to: HSPHLEKGCIGRKDAGLLPAAGP*TMHQTD
Trigger: ATCAGTCTGGTGCATGGTGCAAGGACCCGCTGCAGG...CAGGAGTCCTGCGTCCTTTCTTCCTATACAGCCCTTCTCCAAATGTGGGCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp ACTACACTACAGCCTGCCCTCCATAGCCCACATTTGGAGAAGGGCTGTATAGGAATACGGTCACCTGCCTaGAGCGGGTCCTTGCACCAT +
Preference number: 4 (lower is better)
Translates to: TTLQPALHSPHLEKGCIGIRSPA*SGSLHH
Trigger: ATGGTGCAAGGACCCGCTGCAGGCAGGTGACCGTAT...TCCTATACAGCCCTTCTCCAAATGTGGGCTATGGAGGGCAGGCTGTAGTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCAGTCAATGTGTCCGTaGGGTAGGGGATCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEQSMCP*GRGSRA
Trigger: TGCCCTGGATCCCCTACCGCACGGACACATTGACTG...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGAGACCACAAAGCCAGTaGCATCTACACGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQRPQSQ*HLHGWA
Trigger: TGCCCAACCGTGTAGATGGCACTGGCTTTGTGGTCT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCATAGTCCACGCGGTTaGCTGCGGCCTCGCTATCAT +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEHSPRG*LRPRYH
Trigger: ATGATAGCGAGGCCGCAGGCAACCGCGTGGACTATG...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTCCAGAAGGAGCAGTTTaGATTGAAGTGGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPPEGAV*IEVVLG
Trigger: GCCAAGAACCACTTCAATGCAAACTGCTCCTTCTGG...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCAGAAGGAGCAGTTTaGATTGAAGTGGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGPEGAV*IEVVLG
Trigger: GCCAAGAACCACTTCAATGCAAACTGCTCCTTCTGG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAACCAGAAGGAGCAGTTTaGATTGAAGTGGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQPEGAV*IEVVLG
Trigger: GCCAAGAACCACTTCAATGCAAACTGCTCCTTCTGG...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCAGTGAGCCATGAGCACTaGGAAGTTGGTGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSVSHEH*EVGEVA
Trigger: AGCCACCTCACCAACTTCGCAGTGCTCATGGCTCAC...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGTCGGTAGTCAATGGCTaGTGCGATGCCGACCACCAG +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMESVVNG*CDADHQ
Trigger: CTGGTGGTCGGCATCGCAGCAGCCATTGACTACCGA...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCTTCGGATCATCTTGTaGAGGGTCACCATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKLRIIL*RVTMRN
Trigger: GTTCCTCATGGTGACCCTGCACAAGATGATCCGAAG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGAAGGAGGACTCTGTCTaGTTCCTCACGGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVKEDSV*FLTVSF
Trigger: GAATGACACCGTGAGGAAGCAGACAGAGTCCTCCTT...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAAGGAGGACTCTGTCTaGTTCCTCACGGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKKEDSV*FLTVSF
Trigger: GAATGACACCGTGAGGAAGCAGACAGAGTCCTCCTT...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGAGACTAGTGACCAACTaGATTTGCCCGTCCCCATCG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQRLVTN*ICPSPS
Trigger: CGATGGGGACGGGCAAATGCAGTTGGTCACTAGTCT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp ACTACACTACAGCCTGCCCTCCATAGCCCACATTTGGAGAAGGGCTGTATAGGAACCAGCATACCCTGTTaGGTAGCTGGCCACTGGACC +
Preference number: 4 (lower is better)
Translates to: TTLQPALHSPHLEKGCIGTSIPC*VAGHWT
Trigger: GGTCCAGTGGCCAGCTACCCAACAGGGTATGCTGGT...TCCTATACAGCCCTTCTCCAAATGTGGGCTATGGAGGGCAGGCTGTAGTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCATTCCTCGAGTTCCCTTaGGGCAAGGTCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSFLEFP*GKVSPP
Trigger: TGGTGGAGAGACCTTGCCCCAAGGGAACTCGAGGAA...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGAGAGCTGGGAGGCACTaGAATGAGGCAATTCCTCGA +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQRAGRH*NEAIPR
Trigger: TCGAGGAATTGCCTCATTCCAGTGCCTCCCAGCTCT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGATCTTCTGGGCTACTTaGTTGACCCAGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVIFWAT*LTQGEV
Trigger: CACTTCTCCCTGGGTCAACCAAGTAGCCCAGAAGAT...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCAATCTTCTGGGCTACTTaGTTGACCCAGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASIFWAT*LTQGEV
Trigger: CACTTCTCCCTGGGTCAACCAAGTAGCCCAGAAGAT...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CACTTGGGGACCTGCCATGTAGCTCTGAGGCCTAGAAGCAAGTTGCTCCCTGTGATCTTCTGGGCTACTTaGTTGACCCAGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: HLGTCHVALRPRSKLLPVIFWAT*LTQGEV
Trigger: CACTTCTCCCTGGGTCAACCAAGTAGCCCAGAAGAT...CACAGGGAGCAACTTGCTTCTAGGCCTCAGAGCTACATGGCAGGTCCCCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCATCTAGAAGCATGGTaGCTGTATGAACCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGHLEAW*LYEPVR
Trigger: CCGAACAGGTTCATACAGCCACCATGCTTCTAGATG...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGCTTCATGGCGGAGAGCTGAATaGAGTTCTCACTGGGATACT +
Preference number: 4 (lower is better)
Translates to: AQIWSLQWVRGPVGSCASWRRAE*SSHWDT
Trigger: AGTATCCCAGTGAGAACTCCATTCAGCTCTCCGCCA...TGAAGCACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCAGGCACATGTGGTATaGGTCTTATTGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKQAHVV*VLLDST
Trigger: GGTGGAGTCCAATAAGACCCATACCACATGTGCCTG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACAGGCACATGTGGTATaGGTCTTATTGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLQAHVV*VLLDST
Trigger: GGTGGAGTCCAATAAGACCCATACCACATGTGCCTG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGGGCTGCAGGCACATGTaGTATGGGTCTTATTGGACT +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWGCRHM*YGSYWT
Trigger: AGTCCAATAAGACCCATACCACATGTGCCTGCAGCC...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGGGCTGCAGGCACATGTaGTATGGGTCTTATTGGACT +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVGCRHM*YGSYWT
Trigger: AGTCCAATAAGACCCATACCACATGTGCCTGCAGCC...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTAGGCTGCAGGCACATGTaGTATGGGTCTTATTGGACT +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLGCRHM*YGSYWT
Trigger: AGTCCAATAAGACCCATACCACATGTGCCTGCAGCC...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAATGCACAGATTCTTGTaGATGGTGTTGCGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQMHRFL*MVLRSV
Trigger: GACTGACCGCAACACCATCCACAAGAATCTGTGCAT...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTATGCACAGATTCTTGTaGATGGTGTTGCGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPMHRFL*MVLRSV
Trigger: GACTGACCGCAACACCATCCACAAGAATCTGTGCAT...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TGTAGCATGGAGGGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGAAGATGAAGACCCCCTaGAAGGCGTTGAAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: CSMEGSRPSVPLTPLFLWKMKTP*KALKVV
Trigger: CACTACCTTCAACGCCTTCCAGGGGGTCTTCATCTT...CCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCCCTCCATGCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGCTGTAGCACGGGGTTaGTCAGTAGGTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEAVARG*SVGGSP
Trigger: TGGGGAACCACCTACTGACCAACCCCGTGCTACAGC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR CAA 72 bp GAGTCAGGCTTGAGCACTGATGAGCTTCGGATCATCTaGTGCAGGGTCACCATGAGGAACACCAGGTTCACC +
Preference number: 4 (lower is better)
Translates to: ESGLSTDELRII*CRVTMRNTRFT
Trigger: GGTGAACCTGGTGTTCCTCATGGTGACCCTGCACAAGATGATCCGAAGCTCATCAGTGCTCAAGCCTGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
3UTR CAA 72 bp AGCTCATGGCAGCAGCAAGCTGAGACCCAAGGATGCTaGAAAACTCATGGCACTTGTGAGGAAGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSWQQQAETQGC*KTHGTCEEGGR
Trigger: CCTGCCTCCTTCCTCACAAGTGCCATGAGTTTTCAAGCATCCTTGGGTCTCAGCTTGCTGCTGCCATGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGGTTCGCATTGGTGTTaGAGGCATAGTCCACGCGGT +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEGSHWC*RHSPRG
Trigger: ACCGCGTGGACTATGCCTTCAACACCAATGCGAACC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACATTCTCTCCACTCTTaGTCTTCTGGGCTACTTGGT +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLHSLHS*SSGLLG
Trigger: ACCAAGTAGCCCAGAAGATCAAGAGTGGAGAGAATG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTTCCACAGGCAGGGAGCTTCAGAAGTTGGTCACACCTACCAGCTTCTCTCTCATCTCCACCACAGCCTTaGTGTAGTCCTTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LPQAGSFRSWSHLPASLSSPPQP*CSPCRF
Trigger: GAACCTGCAAGGACTACATCAAGGCTGTGGTGGAGA...TGAGAGAGAAGCTGGTAGGTGTGACCAACTTCTGAAGCTCCCTGCCTGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CCTAGGCCAGCCACTCCATACAGCCACAGCAAAGTCCAGATCCAGTTAAGTCAGAGCATGGTGGCTGTATaGACCTGTTCGGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: PRPATPYSHSKVQIQLSQSMVAV*TCSVAF
Trigger: GAATGCCACCGAACAGGTTCATACAGCCACCATGCT...CTGACTTAACTGGATCTGGACTTTGCTGTGGCTGTATGGAGTGGCTGGCCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGAGCGAGCAGGTTCTCTaGCATTGTCAGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMESEQVL*HCQPAG
Trigger: TCCTGCTGGCTGACAATGTCAGAGAACCTGCTCGCT...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGAGGAGCAGTTTGCATTaGAGTGGTTCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQRSSLH*SGSWPP
Trigger: TGGAGGCCAAGAACCACTTCAATGCAAACTGCTCCT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CACTTGGGGACCTGCCATGTAGCTCTGAGGCCTAGAAGCAAGTTGCTCCCTGTGAACCCAGGTGATGACTaGCAGCAGCAGCTCATTAAT +
Preference number: 4 (lower is better)
Translates to: HLGTCHVALRPRSKLLPVNPGDD*QQQLIN
Trigger: ATTAATGAGCTGCTGCTGTCAGTCATCACCTGGGTT...CACAGGGAGCAACTTGCTTCTAGGCCTCAGAGCTACATGGCAGGTCCCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGAGTGAAAGACAAAGATaGAGACCCCCTGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQSERQR*RPPGRR
Trigger: ACGCCTTCCAGGGGGTCTTCATCTTTGTCTTTCACT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGTGGGGAGTTGTGATTGTTGCCCTCAGTTaGATAGATGACCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: ELPKYGHSSGLGALWGVVIVALS*IDDPQS
Trigger: GGACTGTGGGTCATCTATGCAACTGAGGGCAACAAT...CACAACTCCCCACAGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp GCAGATAGAGTGGATCCTGCAAGGCTTTGGCCAGCTCAGAAGCGGCAACCCCTACCAGAAGGAGCAGTTTaGATTGAAGTGGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ADRVDPARLWPAQKRQPLPEGAV*IEVVLG
Trigger: GCCAAGAACCACTTCAATGCAAACTGCTCCTTCTGG...TAGGGGTTGCCGCTTCTGAGCTGGCCAAAGCCTTGCAGGATCCACTCTATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCCCTGGTAATAGTACTTGGTaGGTGAATACTCGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PTGLGTAQIWSLQWVRGPGNSTW*VNTRSR
Trigger: TCGAGAGCGAGTATTCACGCACCAAGTACTATTACC...AGGGCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGCTTCGGATCATCTTGTaGAGGGTCACCATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQLRIIL*RVTMRN
Trigger: GTTCCTCATGGTGACCCTGCACAAGATGATCCGAAG...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TGCAGCCATCTTGGCAAAAGCATCTTTGGGTGTGAAGATATCTTGTCTCCTGGCCAGCAGGAAGAGCAGTaGAATGGCACCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: CSHLGKSIFGCEDILSPGQQEEQ*NGTQRP
Trigger: TGGGCGCTGGGTGCCATTGCACTGCTCTTCCTGCTG...GCCAGGAGACAAGATATCTTCACACCCAAAGATGCTTTTGCCAAGATGGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp CAGCCCACAGGACTGGGAACTGCCCAAATATGGTCACTCCAGTGGGTTAGGGGCTTGCTGTACTCCTTGTaGACCTTTTTCTGTAAGGCG +
Preference number: 4 (lower is better)
Translates to: QPTGLGTAQIWSLQWVRGLLYSL*TFFCKA
Trigger: CGCCTTACAGAAAAAGGTGCACAAGGAGTACAGCAA...GCCCCTAACCCACTGGAGTGACCATATTTGGGCAGTTCCCAGTCCTGTGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGAAGGAGGACTCTGTCTaGTTCCTCACGGTGTCATTC +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQKEDSV*FLTVSF
Trigger: GAATGACACCGTGAGGAAGCAGACAGAGTCCTCCTT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CACTTGGGGACCTGCCATGTAGCTCTGAGGCCTAGAAGCAAGTTGCTCCCTGTGGCTGTTGATGTCACCTaGCATAAAGGAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: HLGTCHVALRPRSKLLPVAVDVT*HKGGLC
Trigger: ACAGAGTCCTCCTTTATGGCAGGTGACATCAACAGC...CACAGGGAGCAACTTGCTTCTAGGCCTCAGAGCTACATGGCAGGTCCCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR GCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGGCTGTTGATGTCACCTaGCATAAAGGAGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKAVDVT*HKGGLC
Trigger: ACAGAGTCCTCCTTTATGGCAGGTGACATCAACAGC...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR GCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGGAGAAGTTCAATCTCTaGCCGGTCAGCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMEEKFNL*PVSTPW
Trigger: CCAGGGAGTGCTGACCGGGCAGAGATTGAACTTCTC...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCTTCTGCAGGGTCCCTaGGCACACGAAGACTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMELLQGP*AHEDFL
Trigger: CAGAAAGTCTTCGTGTGCCCAGGGACCCTGCAGAAG...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045393.15
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGATCCCGTCCATCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGCATCTAGAAGCATGGTaGCTGTATGAACCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: GSRPSVPLTPLFLWWMEKHLEAW*LYEPVR
Trigger: CCGAACAGGTTCATACAGCCACCATGCTTCTAGATG...CTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGATGGACGGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGACCAACTCCTGCACTTaGCCCTCCGTGTTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMETNSCT*PSVFST
Trigger: TGTGCTGAACACGGAGGGCCAAGTGCAGGAGTTGGT...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGCTGTGGCATTCTCCGTaGACAAGAAGAGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMELWHSP*TRRGPG
Trigger: ACCTGGGCCTCTTCTTGTCCACGGAGAATGCCACAG...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGCTGCCAGCTTCACTGTaGCATTCTCCGTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMLPASL*HSPWTR
Trigger: TCTTGTCCACGGAGAATGCCACAGTGAAGCTGGCAG...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGTGGTATGGGTCTTATTaGACTCCACCAATCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQWYGSY*TPPIGS
Trigger: GCTGCCGATTGGTGGAGTCCAATAAGACCCATACCA...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGGGCTGCAGGCACATGTaGTATGGGTCTTATTGGACT +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQGCRHM*YGSYWT
Trigger: AGTCCAATAAGACCCATACCACATGTGCCTGCAGCC...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GTAAAAAGCTGCTCTGGCGGCTCCCACCCCGGCTGGGATGTACACATACAGGAAATGCACAGATTCTTGTaGATGGTGTTGCGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: VKSCSGGSHPGWDVHIQEMHRFL*MVLRSV
Trigger: GACTGACCGCAACACCATCCACAAGAATCTGTGCAT...TTCCTGTATGTGTACATCCCAGCCGGGGTGGGAGCCGCCAGAGCAGCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp ACTACACTACAGCCTGCCCTCCATAGCCCACATTTGGAGAAGGGCTGTATAGGAAGCTTCGGTAGTCAATaGCTGCTGCGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: TTLQPALHSPHLEKGCIGSFGSQ*LLRCRP
Trigger: TGGTCGGCATCGCAGCAGCCATTGACTACCGAAGCT...TCCTATACAGCCCTTCTCCAAATGTGGGCTATGGAGGGCAGGCTGTAGTGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp CTGGCTCCTAGGCCAGCCACTCCATACAGCCACAGCAAAGTCCAGATCCAGTTAAAGATGAAGACCCCCTaGAAGGCGTTGAAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: LAPRPATPYSHSKVQIQLKMKTP*KALKVV
Trigger: CACTACCTTCAACGCCTTCCAGGGGGTCTTCATCTT...TAACTGGATCTGGACTTTGCTGTGGCTGTATGGAGTGGCTGGCCTAGGAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR CCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGAAGATGAAGACCCCCTaGAAGGCGTTGAAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQKMKTP*KALKVV
Trigger: CACTACCTTCAACGCCTTCCAGGGGGTCTTCATCTT...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR CCA 90 bp GGGCTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAAGTTGCCGTTAAGTaGCAGGGTGTCCATGCCACA +
Preference number: 4 (lower is better)
Translates to: GLSRGIRPSLQEARNCSMEVAVK*QGVHAT
Trigger: TGTGGCATGGACACCCTGCCACTTAACGGCAACTTC...CATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
3UTR CAA 72 bp ACAGGGTCCATGAGGAAGACGCGGCTAGACTCCTTATaGATAGATGCTGCGATGACCTGTGAGTTGACCACC +
Preference number: 4 (lower is better)
Translates to: TGSMRKTRLDSL*IDAAMTCELTT
Trigger: GGTGGTCAACTCACAGGTCATCGCAGCATCTATCAATAAGGAGTCTAGCCGCGTCTTCCTCATGGACCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
CDS-3UTR TCA 90 bp AAGATGACAGGGTCCATGAGGAAGACGCGGCTAGACTCCTTATTGATAGATGCTCTTGGGTGGCAGAGGTaGCAAGGACAGTCGTCACAC +
Preference number: 4 (lower is better)
Translates to: KMTGSMRKTRLDSLLIDALGWQR*QGQSSH
Trigger: GTGTGACGACTGTCCTTGTCACCTCTGCCACCCAAG...AGCATCTATCAATAAGGAGTCTAGCCGCGTCTTCCTCATGGACCCTGTCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124355.8
CDS-3UTR TCA 90 bp TGCAGCCATCTTGGCAAAAGCATCTTTGGGTGTGAAGATATCTTGTCTCCTGGCCTTGGGTGGCAGAGGTaGCAAGGACAGTCGTCACAC +
Preference number: 4 (lower is better)
Translates to: CSHLGKSIFGCEDILSPGLGWQR*QGQSSH
Trigger: GTGTGACGACTGTCCTTGTCACCTCTGCCACCCAAG...GCCAGGAGACAAGATATCTTCACACCCAAAGATGCTTTTGCCAAGATGGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp TCTGTCCCACTAACCCCACTGTTCCTCTGGTGGATGGAGAAGAGTGAGCAGCAGCATTCTCTCCACTCTTaGTCTTCTGGGCTACTTGGT +
Preference number: 4 (lower is better)
Translates to: SVPLTPLFLWWMEKSEQQHSLHS*SSGLLG
Trigger: ACCAAGTAGCCCAGAAGATCAAGAGTGGAGAGAATG...CTGCTGCTCACTCTTCTCCATCCACCAGAGGAACAGTGGGGTTAGTGGGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTCCTCACCCCACAGCTTCTTCCAGCTTTATTGGTGTCTGATGGCCTTGGGCCTCATTCTCTCCACTCTTaGTCTTCTGGGCTACTTGGT +
Preference number: 4 (lower is better)
Translates to: LLTPQLLPALLVSDGLGPHSLHS*SSGLLG
Trigger: ACCAAGTAGCCCAGAAGATCAAGAGTGGAGAGAATG...AGGCCCAAGGCCATCAGACACCAATAAAGCTGGAAGAAGCTGTGGGGTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141158.8
CDS-3UTR TCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGTCTCCACCACAGCCTTaGTGTAGTCCTTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMESPPQP*CSPCRF
Trigger: GAACCTGCAAGGACTACATCAAGGCTGTGGTGGAGA...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp CTTTCTCGTGGTATAAGGCCCAGTCTCCAGGAAGCAAGGAACTGTAGCATGGAGAGCATGGTGGCTGTATaGACCTGTTCGGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: LSRGIRPSLQEARNCSMESMVAV*TCSVAF
Trigger: GAATGCCACCGAACAGGTTCATACAGCCACCATGCT...CTCCATGCTACAGTTCCTTGCTTCCTGGAGACTGGGCCTTATACCACGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8
ENSMUST00000152978.8
CDS-3UTR TCA 90 bp GACCCCAAATCTGTTCCCCAGATAGCCCAGCCCACAGGACTGGGAACTGCCCAAGGTTGTTGTAGAGAATaGAGACAACTTTCACCACAC +
Preference number: 4 (lower is better)
Translates to: DPKSVPQIAQPTGLGTAQGCCRE*RQLSPH
Trigger: GTGTGGTGAAAGTTGTCTTCATTCTCTACAACAACC...TTGGGCAGTTCCCAGTCCTGTGGGCTGGGCTATCTGGGGAACAGATTTGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000045393.15
ENSMUST00000131717.2
ENSMUST00000132500.8
ENSMUST00000141158.8