Pregenerated sensors for ADGRG6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039116Ensembl transcript IDs: ENSMUST00000041168.6, ENSMUST00000208429.3, ENSMUST00000238680.2
Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTaGCATTCCACCGGCGTAGCTTTCCGTGCTTCTTGGGCATCACAC | + |
Preference number: 1 (lower is better) Translates to: AVSPLSSAVPYRAAH*HSTGVAFRASWASH Trigger: GTGTGATGCCCAAGAAGCACGGAAAGCTACGCCGGTGGAATGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR GCA 90 bp | TCCCTACAGAGCAGCACACTGACATTCCACCGGCGTAGCTTTCCGTaGTTCTTGGGCATCACACTTCTCCAGACAGGCTTTCTTTTCCCT | + |
Preference number: 1 (lower is better) Translates to: SLQSSTLTFHRRSFP*FLGITLLQTGFLFP Trigger: AGGGAAAAGAAAGCCTGTCTGGAGAAGTGTGATGCCCAAGAAGCACGGAAAGCTACGCCGGTGGAATGTCAGTGTGCTGCTCTGTAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR CCA 90 bp | AGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGCTATCTTaGAAACCTGAAACTTCCCAGAGAACCCTGAGCATGGGGCTAAAG | + |
Preference number: 1 (lower is better) Translates to: RLALLKSPFVVTVLS*KPETSQRTLSMGLK Trigger: CTTTAGCCCCATGCTCAGGGTTCTCTGGGAAGTTTCAGGTTTCCAAGATAGCACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR GCA 90 bp | GTGACTGACAGAGAGCTAAGGGGATCTGTTGGCTGTTTCAAAGCCTaGAAGTTCTTCTACATCCTAGCTGAGAATGGCCTACTTTCTGCA | + |
Preference number: 1 (lower is better) Translates to: VTDRELRGSVGCFKA*KFFYILAENGLLSA Trigger: TGCAGAAAGTAGGCCATTCTCAGCTAGGATGTAGAAGAACTTGCAGGCTTTGAAACAGCCAACAGATCCCCTTAGCTCTCTGTCAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR TCA 90 bp | AAGACTAAGTCACTATCCCTTTCTCCTACATGGCCTACTCCTTTGTaGAAATCAGGCTCAGCAAAGTTCAGGTCTGCCAAGATGGCAGTC | + |
Preference number: 1 (lower is better) Translates to: KTKSLSLSPTWPTPL*KSGSAKFRSAKMAV Trigger: GACTGCCATCTTGGCAGACCTGAACTTTGCTGAGCCTGATTTTCACAAAGGAGTAGGCCATGTAGGAGAAAGGGATAGTGACTTAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR CCA 90 bp | TGTCTTTACAAGAGTCAGGCCACTGCCAAGCCTAACTATGAGGTGTaGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCCTC | + |
Preference number: 1 (lower is better) Translates to: CLYKSQATAKPNYEV*YMRAKLKFLLGVLL Trigger: GAGGAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTTGGCAGTGGCCTGACTCTTGTAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR CCA 90 bp | GAGGAGGCAAATGAGAGCCACAGACTTGTAACTGAAGGCAAAATTTaGACCAGTCGTTTAAATCCACTTGCAAATATGTTTGGCCTGTTG | + |
Preference number: 1 (lower is better) Translates to: EEANESHRLVTEGKI*TSRLNPLANMFGLL Trigger: CAACAGGCCAAACATATTTGCAAGTGGATTTAAACGACTGGTCCAAATTTTGCCTTCAGTTACAAGTCTGTGGCTCTCATTTGCCTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR GCA 90 bp | AAATGGCAAATCAGCTTTAGCAGTTTCTCACTACTAATTCTAGTTTaGCCTCACAGTTGCTTTACCTGTCATATTCAACAATATCACTAC | + |
Preference number: 1 (lower is better) Translates to: KWQISFSSFSLLILV*PHSCFTCHIQQYHY Trigger: GTAGTGATATTGTTGAATATGACAGGTAAAGCAACTGTGAGGGCAAACTAGAATTAGTAGTGAGAAACTGCTAAAGCTGATTTGCCATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR GCA 90 bp | AGCTTTAGCAGTTTCTCACTACTAATTCTAGTTTGCCCTCACAGTTaGTTTACCTGTCATATTCAACAATATCACTACAGAAAACTGTTT | + |
Preference number: 1 (lower is better) Translates to: SFSSFSLLILVCPHS*FTCHIQQYHYRKLF Trigger: AAACAGTTTTCTGTAGTGATATTGTTGAATATGACAGGTAAAGCAACTGTGAGGGCAAACTAGAATTAGTAGTGAGAAACTGCTAAAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR TCA 90 bp | CTCCTGCCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGAGCATGGGTCAGTTTTaGCAGGGACTTGTCCGTGGA | + |
Preference number: 2 (lower is better) Translates to: LLPSSRLALLKSPFVVTVSMGQF*QGLVRG Trigger: TCCACGGACAAGTCCCTGTCAAAACTGACCCATGCT...CACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGGCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR CAA 90 bp | CAGAGCAGCACACTGACATTCCACCGGCGTAGCTTTCCGTGCTTCTaGGGCATCACACTTCTCCAGACAGGCTTTCTTTTCCCTTTGTTT | + |
Preference number: 2 (lower is better) Translates to: QSSTLTFHRRSFPCF*GITLLQTGFLFPLF Trigger: AAACAAAGGGAAAAGAAAGCCTGTCTGGAGAAGTGTGATGCCCAAGAAGCACGGAAAGCTACGCCGGTGGAATGTCAGTGTGCTGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR-3UTR GCA 90 bp | CTCCTGCCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGACTTGTCCGTGGAAGTaGTGTCTGAGTGATCCACTT | + |
Preference number: 2 (lower is better) Translates to: LLPSSRLALLKSPFVVTVTCPWK*CLSDPL Trigger: AAGTGGATCACTCAGACAGCACTTCCACGGACAAGT...CACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGGCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR CAA 90 bp | AAGGGGACAGGAGAGGTGCTTGTTCTTAAGTTCCAGGAGGCCCACTaGAACGTAATGTCCACATTCAACTGGATTGGCTTATGTGCACGG | + |
Preference number: 2 (lower is better) Translates to: KGTGEVLVLKFQEAH*NVMSTFNWIGLCAR Trigger: CCGTGCACATAAGCCAATCCAGTTGAATGTGGACATTACGTTCAAGTGGGCCTCCTGGAACTTAAGAACAAGCACCTCTCCTGTCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR TCA 90 bp | TCTTGGAAACCTGAAACTTCCCAGAGAACCCTGAGCATGGGGCTAAAGCCAGCAAGTGTTCTCAGCTCTTaGAGTGTGATGACTGAGCTC | + |
Preference number: 2 (lower is better) Translates to: SWKPETSQRTLSMGLKPASVLSS*SVMTEL Trigger: GAGCTCAGTCATCACACTTCAAGAGCTGAGAACACT...TGCTGGCTTTAGCCCCATGCTCAGGGTTCTCTGGGAAGTTTCAGGTTTCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR CCA 90 bp | CCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGCTATCTGCTTTCCGTGCTTCTTaGGCATCACACTTCTCCAGA | + |
Preference number: 2 (lower is better) Translates to: PSSRLALLKSPFVVTVLSAFRAS*ASHFSR Trigger: TCTGGAGAAGTGTGATGCCCAAGAAGCACGGAAAGC...AGATAGCACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR TCA 90 bp | CTCCTGCCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGTGGTTGAAATTTCACTaGAAAAGGAAACGATGCTGC | + |
Preference number: 2 (lower is better) Translates to: LLPSSRLALLKSPFVVTVWLKFH*KRKRCC Trigger: GCAGCATCGTTTCCTTTTTCAGTGAAATTTCAACCA...CACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGGCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR CCA 90 bp | CTCCTGCCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGCCTAACTATGAGGTGTaGTATATGAGAGCTAAACTC | + |
Preference number: 2 (lower is better) Translates to: LLPSSRLALLKSPFVVTVPNYEV*YMRAKL Trigger: GAGTTTAGCTCTCATATACCACACCTCATAGTTAGG...CACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGGCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR TCA 90 bp | CCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGCTATCTACCTTATCAATAACCTaGTGGACGGGAATGATTGAC | + |
Preference number: 2 (lower is better) Translates to: PSSRLALLKSPFVVTVLSTLSIT*WTGMID Trigger: GTCAATCATTCCCGTCCATCAGGTTATTGATAAGGT...AGATAGCACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR TCA 90 bp | CCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGCTATCTTTGAAGTGTGATGACTaGGCTCCACCATGGAAATAT | + |
Preference number: 2 (lower is better) Translates to: PSSRLALLKSPFVVTVLSLKCDD*APPWKY Trigger: ATATTTCCATGGTGGAGCTCAGTCATCACACTTCAA...AGATAGCACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR TCA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCAGTGTTCTCAGCTCTTaGAGTGTGATGACTGAGCTC | + |
Preference number: 2 (lower is better) Translates to: GNDAAIFIENSTGTEPVSSVLSS*SVMTEL Trigger: GAGCTCAGTCATCACACTTCAAGAGCTGAGAACACT...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR-3UTR TCA 90 bp | CACTCTTCTGAGGAGGCAAATGAGAGCCACAGACTTGTAACTGAAGGCAAAATTGAAGTGCTGTCTGAGTaGTCCACTTTTGTTGAAGGA | + |
Preference number: 2 (lower is better) Translates to: HSSEEANESHRLVTEGKIEVLSE*STFVEG Trigger: TCCTTCAACAAAAGTGGATCACTCAGACAGCACTTC...AATTTTGCCTTCAGTTACAAGTCTGTGGCTCTCATTTGCCTCCTCAGAAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR TCA 90 bp | GTTTGCCCTCACAGTTGCTTTACCTGTCATATTCAACAATATCACTACAGAAAATACAGAGCAGCACACTaGCATTCCACCGGCGTAGCT | + |
Preference number: 2 (lower is better) Translates to: VCPHSCFTCHIQQYHYRKYRAAH*HSTGVA Trigger: AGCTACGCCGGTGGAATGTCAGTGTGCTGCTCTGTA...TTTTCTGTAGTGATATTGTTGAATATGACAGGTAAAGCAACTGTGAGGGCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR GCA 90 bp | AAGCCTAACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGCAGTCCTCTAAGCTCTaGAGTTCCCTACAGAGCAGC | + |
Preference number: 2 (lower is better) Translates to: KPNYEVWYMRAKLKFLLGQSSKL*SSLQSS Trigger: GCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTG...CCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR-3UTR TCA 90 bp | CACTCTTCTGAGGAGGCAAATGAGAGCCACAGACTTGTAACTGAAGGCAAAATTTTGTATGCCACAGTCTaGTCCATGCATATTCCACTA | + |
Preference number: 2 (lower is better) Translates to: HSSEEANESHRLVTEGKILYATV*SMHIPL Trigger: TAGTGGAATATGCATGGATCAGACTGTGGCATACAA...AATTTTGCCTTCAGTTACAAGTCTGTGGCTCTCATTTGCCTCCTCAGAAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR CCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCTGTTCTCCACCAGCATaGGTCAGTTTTGACAGGGAC | + |
Preference number: 2 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLCSPPA*VSFDRD Trigger: GTCCCTGTCAAAACTGACCCATGCTGGTGGAGAACA...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR GCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACAGTCCTCTAAGCTCTaGAGTTCCCTACAGAGCAGC | + |
Preference number: 2 (lower is better) Translates to: TEKGNDAAIFIENSTGTEQSSKL*SSLQSS Trigger: GCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTG...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR-3UTR CCA 90 bp | ATAAATATGTACAGAAGAGACATTGCCAAAGGTACTCTACACAGTAAGAAACAGCCTATATGTATCCTGTaGTACAATGAGCAGCCTGCT | + |
Preference number: 2 (lower is better) Translates to: INMYRRDIAKGTLHSKKQPICIL*YNEQPA Trigger: AGCAGGCTGCTCATTGTACCACAGGATACATATAGG...CTGTTTCTTACTGTGTAGAGTACCTTTGGCAATGTCTCTTCTGTACATATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR TCA 90 bp | GTTTGCCCTCACAGTTGCTTTACCTGTCATATTCAACAATATCACTACAGAAAAGTGGCTGAAGGCATCTaGCAGGATGATATTTTTATA | + |
Preference number: 2 (lower is better) Translates to: VCPHSCFTCHIQQYHYRKVAEGI*QDDIFI Trigger: TATAAAAATATCATCCTGTCAGATGCCTTCAGCCAC...TTTTCTGTAGTGATATTGTTGAATATGACAGGTAAAGCAACTGTGAGGGCAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR TCA 72 bp | GTCAGGATTGGGGCTGTTTTACAGCTGTGTGTAGCCTaGACTCTGGGTCTCCCATGGAGCCCTGTCCCACTC | + |
Preference number: 3 (lower is better) Translates to: VRIGAVLQLCVA*TLGLPWSPVPL Trigger: GAGTGGGACAGGGCTCCATGGGAGACCCAGAGTTCAGGCTACACACAGCTGTAAAACAGCCCCAATCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR CAA 90 bp | CTCCTGCCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGATAGGACTCCACCACTaGGGCTCAACCTACACCCTC | + |
Preference number: 3 (lower is better) Translates to: LLPSSRLALLKSPFVVTVIGLHH*GSTYTL Trigger: GAGGGTGTAGGTTGAGCCCAAGTGGTGGAGTCCTAT...CACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGGCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR CCA 72 bp | TGGACGGGAATGATTGACGTCTGTTCTCCACCAGCATaGGTCAGTTTTGACAGGGACTTGTCCGTGGAAGTG | + |
Preference number: 3 (lower is better) Translates to: WTGMIDVCSPPA*VSFDRDLSVEV Trigger: CACTTCCACGGACAAGTCCCTGTCAAAACTGACCCATGCTGGTGGAGAACAGACGTCAATCATTCCCGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR CCA 72 bp | GCTAAACCTGGAACACATCACAGTGAAAGGAGAGGGTaGGAAGCGAATAGCCAGAGTCAGGATTGGGGCTGT | + |
Preference number: 3 (lower is better) Translates to: AKPGTHHSERRG*EANSQSQDWGC Trigger: ACAGCCCCAATCCTGACTCTGGCTATTCGCTTCCCACCCTCTCCTTTCACTGTGATGTGTTCCAGGTTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR GCA 72 bp | GCTTCCCTAACAAGATGCAGTCAGTCCTCTAAGCTCTaGAGTTCCCTACAGAGCAGCACACTGACATTCCAC | + |
Preference number: 3 (lower is better) Translates to: ASLTRCSQSSKL*SSLQSSTLTFH Trigger: GTGGAATGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCTTGTTAGGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR CCA 72 bp | CACCAGCATGGGTCAGTTTTGACAGGGACTTGTCCGTaGAAGTGCTGTCTGAGTGATCCACTTTTGTTGAAG | + |
Preference number: 3 (lower is better) Translates to: HQHGSVLTGTCP*KCCLSDPLLLK Trigger: CTTCAACAAAAGTGGATCACTCAGACAGCACTTCCACGGACAAGTCCCTGTCAAAACTGACCCATGCTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR CCA 72 bp | TGCTTAATGGGAACTCTCATCCCTCTAATGAGCCTATaGACCTATGTGCACACAGAAGGGGACAGGAGAGGT | + |
Preference number: 3 (lower is better) Translates to: CLMGTLIPLMSL*TYVHTEGDRRG Trigger: ACCTCTCCTGTCCCCTTCTGTGTGCACATAGGTCCATAGGCTCATTAGAGGGATGAGAGTTCCCATTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR TCA 72 bp | CTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTaGAGTGTGATGACTGAGCTCCACCATGGAAATATT | + |
Preference number: 3 (lower is better) Translates to: LYSCRAQSVLSS*SVMTELHHGNI Trigger: AATATTTCCATGGTGGAGCTCAGTCATCACACTTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR TCA 72 bp | TCACTATCCCTTTCTCCTACATGGCCTACTCCTTTGTaGAAATCAGGCTCAGCAAAGTTCAGGTCTGCCAAG | + |
Preference number: 3 (lower is better) Translates to: SLSLSPTWPTPL*KSGSAKFRSAK Trigger: CTTGGCAGACCTGAACTTTGCTGAGCCTGATTTTCACAAAGGAGTAGGCCATGTAGGAGAAAGGGATAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR GCA 72 bp | AGAGAGCTAAGGGGATCTGTTGGCTGTTTCAAAGCCTaGAAGTTCTTCTACATCCTAGCTGAGAATGGCCTA | + |
Preference number: 3 (lower is better) Translates to: RELRGSVGCFKA*KFFYILAENGL Trigger: TAGGCCATTCTCAGCTAGGATGTAGAAGAACTTGCAGGCTTTGAAACAGCCAACAGATCCCCTTAGCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR CCA 72 bp | CTGCTAAAATCTCCCTTTGTGGTCACTGTGCTATCTTaGAAACCTGAAACTTCCCAGAGAACCCTGAGCATG | + |
Preference number: 3 (lower is better) Translates to: LLKSPFVVTVLS*KPETSQRTLSM Trigger: CATGCTCAGGGTTCTCTGGGAAGTTTCAGGTTTCCAAGATAGCACAGTGACCACAAAGGGAGATTTTAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR TCA 72 bp | AGGCCACTGCCAAGCCTAACTATGAGGTGTGGTATATaGGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCC | + |
Preference number: 3 (lower is better) Translates to: RPLPSLTMRCGI*ELNSNFFLGFS Trigger: GGAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTTGGCAGTGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR TCA 72 bp | AGGTCTGCCAAGATGGCAGTCCAGGTTGCTAAAGAATaGATGGCAATAAAAACCCCCATTGCCACATGCTAT | + |
Preference number: 3 (lower is better) Translates to: RSAKMAVQVAKE*MAIKTPIATCY Trigger: ATAGCATGTGGCAATGGGGGTTTTTATTGCCATTCATTCTTTAGCAACCTGGACTGCCATCTTGGCAGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR TCA 72 bp | CTGTTTCAAAGCCTGCAAGTTCTTCTACATCCTAGCTaGGAATGGCCTACTTTCTGCACAGATGTTCCATTC | + |
Preference number: 3 (lower is better) Translates to: LFQSLQVLLHPS*EWPTFCTDVPF Trigger: GAATGGAACATCTGTGCAGAAAGTAGGCCATTCTCAGCTAGGATGTAGAAGAACTTGCAGGCTTTGAAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR CCA 72 bp | AAGAGTCAGGCCACTGCCAAGCCTAACTATGAGGTGTaGTATATGAGAGCTAAACTCAAATTTCTTCTTGGG | + |
Preference number: 3 (lower is better) Translates to: KSQATAKPNYEV*YMRAKLKFLLG Trigger: CCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTTGGCAGTGGCCTGACTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR-3UTR CAA 90 bp | CACTCTTCTGAGGAGGCAAATGAGAGCCACAGACTTGTAACTGAAGGCAAAATTCTTAGGCTGCGTGTCTaGAGATATTTGAGATTCACA | + |
Preference number: 3 (lower is better) Translates to: HSSEEANESHRLVTEGKILRLRV*RYLRFT Trigger: TGTGAATCTCAAATATCTCAAGACACGCAGCCTAAG...AATTTTGCCTTCAGTTACAAGTCTGTGGCTCTCATTTGCCTCCTCAGAAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR-3UTR CAA 90 bp | GTTTGCCCTCACAGTTGCTTTACCTGTCATATTCAACAATATCACTACAGAAAAAACAGTGAGAGGCCATaGCATGGAGTGCTTAATGGG | + |
Preference number: 3 (lower is better) Translates to: VCPHSCFTCHIQQYHYRKNSERP*HGVLNG Trigger: CCCATTAAGCACTCCATGCAATGGCCTCTCACTGTT...TTTTCTGTAGTGATATTGTTGAATATGACAGGTAAAGCAACTGTGAGGGCAAAC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR CCA 72 bp | GTCTATCGAGATTATATTCTACCTATATGTATCCTGTaGTACAATGAGCAGCCTGCTAATATAAGTCTCCCT | + |
Preference number: 3 (lower is better) Translates to: VYRDYILPICIL*YNEQPANISLP Trigger: AGGGAGACTTATATTAGCAGGCTGCTCATTGTACCACAGGATACATATAGGTAGAATATAATCTCGATAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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3UTR CCA 72 bp | AATGAGAGCCACAGACTTGTAACTGAAGGCAAAATTTaGACCAGTCGTTTAAATCCACTTGCAAATATGTTT | + |
Preference number: 3 (lower is better) Translates to: NESHRLVTEGKI*TSRLNPLANMF Trigger: AAACATATTTGCAAGTGGATTTAAACGACTGGTCCAAATTTTGCCTTCAGTTACAAGTCTGTGGCTCTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR GCA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACAGCCAGGAGGAAGAAGTaGAACAGGGCAGCCACAGCC | + |
Preference number: 4 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTARRKK*NRAATA Trigger: GGCTGTGGCTGCCCTGTTGCACTTCTTCCTCCTGGC...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | CTCCTGCCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGCTCTCAGGGTCCGGTTaGTTCTCTTTCCATTCCTCC | + |
Preference number: 4 (lower is better) Translates to: LLPSSRLALLKSPFVVTVLSGSG*FSFHSS Trigger: GGAGGAATGGAAAGAGAAGCAACCGGACCCTGAGAG...CACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGGCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
||
CDS-3UTR TCA 90 bp | TGGGAAGCGAATAGCCAGAGTCAGGATTGGGGCTGTTTTACAGCTGTGTGTAGCGAGAGTCCCCAGTTCTaGACAGTTTGTCAGCTCTGC | + |
Preference number: 4 (lower is better) Translates to: WEANSQSQDWGCFTAVCSESPQF*TVCQLC Trigger: GCAGAGCTGACAAACTGTTCAGAACTGGGGACTCTC...GCTACACACAGCTGTAAAACAGCCCCAATCCTGACTCTGGCTATTCGCTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
||
CDS-3UTR TCA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACAAGGGCCCCAGAAGGTTaGTGTTCCATTAGAAAGGCA | + |
Preference number: 4 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTRAPEG*CSIRKA Trigger: TGCCTTTCTAATGGAACATCAACCTTCTGGGGCCCT...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
CDS-3UTR TCA 90 bp | GCCCTCTGTAGGGTCTCATCCACTCTGATCAGAGGGCTCGGTGCAAACAGTTTTAAGGCACAGATAGGATaGTGCACTTCCTGTGTTCTG | + |
Preference number: 4 (lower is better) Translates to: ALCRVSSTLIRGLGANSFKAQIG*CTSCVL Trigger: CAGAACACAGGAAGTGCATCATCCTATCTGTGCCTT...AAAACTGTTTGCACCGAGCCCTCTGATCAGAGTGGATGAGACCCTACAGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
||
CDS-3UTR TCA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCGCAGGAAGGTCAGGCTaGCCACACTGCGCAGGTTTC | + |
Preference number: 4 (lower is better) Translates to: GNDAAIFIENSTGTEPVSAGRSG*PHCAGF Trigger: GAAACCTGCGCAGTGTGGTCAGCCTGACCTTCCTGC...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
CDS-3UTR GCA 90 bp | CTCCTGCCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGGAGCTTGGGTTGAGATaGTCCAAAAGTCATTGTGCC | + |
Preference number: 4 (lower is better) Translates to: LLPSSRLALLKSPFVVTVELGLR*SKSHCA Trigger: GGCACAATGACTTTTGGAGCATCTCAACCCAAGCTC...CACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGGCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
||
CDS-3UTR GCA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACAGTTTGTCAGCTCTGCTaGAGGAAGCTGGATCAGGTA | + |
Preference number: 4 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTVCQLC*RKLDQV Trigger: TACCTGATCCAGCTTCCTGCAGCAGAGCTGACAAAC...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
3UTR CAA 72 bp | ACACTGACATTCCACCGGCGTAGCTTTCCGTGCTTCTaGGGCATCACACTTCTCCAGACAGGCTTTCTTTTC | + |
Preference number: 4 (lower is better) Translates to: TLTFHRRSFPCF*GITLLQTGFLF Trigger: GAAAAGAAAGCCTGTCTGGAGAAGTGTGATGCCCAAGAAGCACGGAAAGCTACGCCGGTGGAATGTCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
CDS-3UTR TCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACGCAGGAAGGTCAGGCTaGCCACACTGCGCAGGTTTC | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHAGRSG*PHCAGF Trigger: GAAACCTGCGCAGTGTGGTCAGCCTGACCTTCCTGC...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
CDS-3UTR GCA 90 bp | GCCCTCTGTAGGGTCTCATCCACTCTGATCAGAGGGCTCGGTGCAAACAGTTTTCTTGAAAAGGACACATaGATCTCATTCACGCTGGAG | + |
Preference number: 4 (lower is better) Translates to: ALCRVSSTLIRGLGANSFLEKDT*ISFTLE Trigger: CTCCAGCGTGAATGAGATGCATGTGTCCTTTTCAAG...AAAACTGTTTGCACCGAGCCCTCTGATCAGAGTGGATGAGACCCTACAGAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR GCA 90 bp | CAGTCTAAGAAGTCCTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTGAACTCTCAGGGTCCGGTTaGTTCTCTTTCCATTCCTCC | + |
Preference number: 4 (lower is better) Translates to: QSKKSCILAGLRVFSALELSGSG*FSFHSS Trigger: GGAGGAATGGAAAGAGAAGCAACCGGACCCTGAGAG...TTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAGGACTTCTTAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
CDS-3UTR CCA 90 bp | CAGTCTAAGAAGTCCTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTGAAGCGTCCAAATCAGAGTaGGCAACACATCCTGAGGTG | + |
Preference number: 4 (lower is better) Translates to: QSKKSCILAGLRVFSALEASKSE*ATHPEV Trigger: CACCTCAGGATGTGTTGCCCACTCTGATTTGGACGC...TTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAGGACTTCTTAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
CDS-3UTR GCA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACAAGTCACCACCTTCATTaGCAACTTTGGAGGCTTCAA | + |
Preference number: 4 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTSHHLH*QLWRLQ Trigger: TTGAAGCCTCCAAAGTTGGCAATGAAGGTGGTGACT...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
CDS-3UTR TCA 90 bp | CAGTCTAAGAAGTCCTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTGAACATTGTGCCAGTCTATaGCATTCCCAGACACACTAC | + |
Preference number: 4 (lower is better) Translates to: QSKKSCILAGLRVFSALEHCASL*HSQTHY Trigger: GTAGTGTGTCTGGGAATGTCATAGACTGGCACAATG...TTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAGGACTTCTTAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCGAGAGTCCCCAGTTCTaGACAGTTTGTCAGCTCTGC | + |
Preference number: 4 (lower is better) Translates to: GNDAAIFIENSTGTEPVSESPQF*TVCQLC Trigger: GCAGAGCTGACAAACTGTTCAGAACTGGGGACTCTC...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | TGGGAAGCGAATAGCCAGAGTCAGGATTGGGGCTGTTTTACAGCTGTGTGTAGCGCAGACCCCAGCCTATaGTGCAGAATTTTAGAATAT | + |
Preference number: 4 (lower is better) Translates to: WEANSQSQDWGCFTAVCSADPSL*CRILEY Trigger: ATATTCTAAAATTCTGCATCATAGGCTGGGGTCTGC...GCTACACACAGCTGTAAAACAGCCCCAATCCTGACTCTGGCTATTCGCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR GCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCGCCAGGAGGAAGAAGTaGAACAGGGCAGCCACAGCC | + |
Preference number: 4 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLARRKK*NRAATA Trigger: GGCTGTGGCTGCCCTGTTGCACTTCTTCCTCCTGGC...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACAGCCATTCTGCTACTTTaGTCTGCACTTTTACTTCAG | + |
Preference number: 4 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTAILLL*SALLLQ Trigger: CTGAAGTAAAAGTGCAGACCAAAGTAGCAGAATGGC...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | TGGGAAGCGAATAGCCAGAGTCAGGATTGGGGCTGTTTTACAGCTGTGTGTAGCTGCCCATCACCAGTTTaGTTTAAAATCTCATTGGCC | + |
Preference number: 4 (lower is better) Translates to: WEANSQSQDWGCFTAVCSCPSPV*FKISLA Trigger: GGCCAATGAGATTTTAAACCAAACTGGTGATGGGCA...GCTACACACAGCTGTAAAACAGCCCCAATCCTGACTCTGGCTATTCGCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CCA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCGCGTCCAAATCAGAGTaGGCAACACATCCTGAGGTG | + |
Preference number: 4 (lower is better) Translates to: GNDAAIFIENSTGTEPVSASKSE*ATHPEV Trigger: CACCTCAGGATGTGTTGCCCACTCTGATTTGGACGC...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | CCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGCTATCTGATTCATCAGGATTTTaGAGGGATAATCCCTGCGCA | + |
Preference number: 4 (lower is better) Translates to: PSSRLALLKSPFVVTVLSDSSGF*RDNPCA Trigger: TGCGCAGGGATTATCCCTCCAAAATCCTGATGAATC...AGATAGCACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR TCA 90 bp | CAGTCTAAGAAGTCCTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTGAAGGCAAAATGACCTTTTaGTTCCTCAAGGACACAGCA | + |
Preference number: 4 (lower is better) Translates to: QSKKSCILAGLRVFSALEGKMTF*FLKDTA Trigger: TGCTGTGTCCTTGAGGAATCAAAAGGTCATTTTGCC...TTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAGGACTTCTTAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | CCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGCTATCTTGTTCACGATCCGTTTaGCCTTTTCTACAATGCTGT | + |
Preference number: 4 (lower is better) Translates to: PSSRLALLKSPFVVTVLSCSRSV*PFLQCC Trigger: ACAGCATTGTAGAAAAGGTCAAACGGATCGTGAACA...AGATAGCACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR GCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACGCCGAGGTGAGGTTCTaGCCATCACCAGTTTGGTTT | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHAEVRF*PSPVWF Trigger: AAACCAAACTGGTGATGGGCAGAACCTCACCTCGGC...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | GCTAAACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCAAACCCCCACGTCATaGCAAGCAGGAAGGTCAGGC | + |
Preference number: 4 (lower is better) Translates to: AKLKFLLGVLLSRPIILTQTPTS*QAGRSG Trigger: GCCTGACCTTCCTGCTTGGCATGACGTGGGGGTTTG...CGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGTTTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | AAGCCTAACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGCAAACCCCCACGTCATaGCAAGCAGGAAGGTCAGGC | + |
Preference number: 4 (lower is better) Translates to: KPNYEVWYMRAKLKFLLGQTPTS*QAGRSG Trigger: GCCTGACCTTCCTGCTTGGCATGACGTGGGGGTTTG...CCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | CCGATTCTGATGAGTTTGATTCAATTACAGTCTAAGAAGTCCTGTATTCTTGCCGAACAGCAGGGCGCTTaGCTTCAGTCTCCAAGGGCA | + |
Preference number: 4 (lower is better) Translates to: PILMSLIQLQSKKSCILAEQQGA*LQSPRA Trigger: TGCCCTTGGAGACTGAAGCCAAGCGCCCTGCTGTTC...GGCAAGAATACAGGACTTCTTAGACTGTAATTGAATCAAACTCATCAGAATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCGAACAGCAGGGCGCTTaGCTTCAGTCTCCAAGGGCA | + |
Preference number: 4 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLEQQGA*LQSPRA Trigger: TGCCCTTGGAGACTGAAGCCAAGCGCCCTGCTGTTC...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | CAGTCTAAGAAGTCCTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTGAATTGCAGCTGAGAAAATaGCAGATATTCCGCACCCAA | + |
Preference number: 4 (lower is better) Translates to: QSKKSCILAGLRVFSALELQLRK*QIFRTQ Trigger: TTGGGTGCGGAATATCTGCCATTTTCTCAGCTGCAA...TTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAGGACTTCTTAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR CAA 72 bp | GGAGAGGTGCTTGTTCTTAAGTTCCAGGAGGCCCACTaGAACGTAATGTCCACATTCAACTGGATTGGCTTA | + |
Preference number: 4 (lower is better) Translates to: GEVLVLKFQEAH*NVMSTFNWIGL Trigger: TAAGCCAATCCAGTTGAATGTGGACATTACGTTCAAGTGGGCCTCCTGGAACTTAAGAACAAGCACCTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR TCA 90 bp | CAGTCTAAGAAGTCCTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTGAACCAATTCTGAAAGGTTaGATTGAGCCATTCTGCTAC | + |
Preference number: 4 (lower is better) Translates to: QSKKSCILAGLRVFSALEPILKG*IEPFCY Trigger: GTAGCAGAATGGCTCAATTCAACCTTTCAGAATTGG...TTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAGGACTTCTTAGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | CACTCTTCTGAGGAGGCAAATGAGAGCCACAGACTTGTAACTGAAGGCAAAATTGAGTGGAGCCGAGGGTaGTGTCAATGTTTTCTTCTT | + |
Preference number: 4 (lower is better) Translates to: HSSEEANESHRLVTEGKIEWSRG*CQCFLL Trigger: AAGAAGAAAACATTGACATCACCCTCGGCTCCACTC...AATTTTGCCTTCAGTTACAAGTCTGTGGCTCTCATTTGCCTCCTCAGAAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR TCA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACAAACCTTGTAATGAATTaGAGATGGAGAAGAGGTACA | + |
Preference number: 4 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTNLVMN*RWRRGT Trigger: TGTACCTCTTCTCCATCTTCAATTCATTACAAGGTT...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | ACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCCTTCAGCATGGGTCAGTTTTaGCAGGGACTTGTCCGTGGA | + |
Preference number: 4 (lower is better) Translates to: TQISSWGSPLKAYNFNAFSMGQF*QGLVRG Trigger: TCCACGGACAAGTCCCTGTCAAAACTGACCCATGCT...GAAGGCGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCAGGCAAAATCACAGATaGCAGTGGATCTGTCTGTCC | + |
Preference number: 4 (lower is better) Translates to: GNDAAIFIENSTGTEPVSRQNHR*QWICLS Trigger: GGACAGACAGATCCACTGGCATCTGTGATTTTGCCT...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCTTCCTCCCACAGATCTaGACCATGACCACAATGAAC | + |
Preference number: 4 (lower is better) Translates to: GNDAAIFIENSTGTEPVSFLPQI*TMTTMN Trigger: GTTCATTGTGGTCATGGTGCAGATCTGTGGGAGGAA...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACTGTTCTCCACCAGCATaGGTCAGTTTTGACAGGGAC | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHCSPPA*VSFDRD Trigger: GTCCCTGTCAAAACTGACCCATGCTGGTGGAGAACA...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | ACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCCTTCTGTAAGGGACTCGTCTaGGTAGGAGAAAGCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: TQISSWGSPLKAYNFNAFCKGLV*VGESCP Trigger: TGGACAGCTTTCTCCTACTCAGACGAGTCCCTTACA...GAAGGCGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACCATTGTGCCAGTCTATaGCATTCCCAGACACACTAC | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHHCASL*HSQTHY Trigger: GTAGTGTGTCTGGGAATGTCATAGACTGGCACAATG...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | ACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCCTTCAGGGCCCCAGAAGGTTaGTGTTCCATTAGAAAGGCA | + |
Preference number: 4 (lower is better) Translates to: TQISSWGSPLKAYNFNAFRAPEG*CSIRKA Trigger: TGCCTTTCTAATGGAACATCAACCTTCTGGGGCCCT...GAAGGCGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACGAGTGGAGCCGAGGGTaGTGTCAATGTTTTCTTCTT | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHEWSRG*CQCFLL Trigger: AAGAAGAAAACATTGACATCACCCTCGGCTCCACTC...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | CCGATTCTGATGAGTTTGATTCAATTACAGTCTAAGAAGTCCTGTATTCTTGCCGCCGAGGTGAGGTTCTaGCCATCACCAGTTTGGTTT | + |
Preference number: 4 (lower is better) Translates to: PILMSLIQLQSKKSCILAAEVRF*PSPVWF Trigger: AAACCAAACTGGTGATGGGCAGAACCTCACCTCGGC...GGCAAGAATACAGGACTTCTTAGACTGTAATTGAATCAAACTCATCAGAATCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACAGGCAAAATCACAGATaGCAGTGGATCTGTCTGTCC | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHRQNHR*QWICLS Trigger: GGACAGACAGATCCACTGGCATCTGTGATTTTGCCT...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACAGGATCTTTCAGATTCTaGATAGTAATGTTTCCAATG | + |
Preference number: 4 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTGSFRF*IVMFPM Trigger: CATTGGAAACATTACTATCCAGAATCTGAAAGATCC...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
CDS-3UTR CCA 90 bp | GCTAAACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCAATGTACATGTGGATaGCTTCCAGCCCCATCCAGG | + |
Preference number: 4 (lower is better) Translates to: AKLKFLLGVLLSRPIILTQCTCG*LPAPSR Trigger: CCTGGATGGGGCTGGAAGCCATCCACATGTACATTG...CGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGTTTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
CDS-3UTR CCA 90 bp | CCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGCTATCTTTGAATTGGAGCCAATaGAGCTTGAAGACAAAGATT | + |
Preference number: 4 (lower is better) Translates to: PSSRLALLKSPFVVTVLSLNWSQ*SLKTKI Trigger: AATCTTTGTCTTCAAGCTCCATTGGCTCCAATTCAA...AGATAGCACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
||
CDS-3UTR TCA 90 bp | GCTAAACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGTGTAAGGGACTCGTCTaGGTAGGAGAAAGCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: AKLKFLLGVLLSRPIILTCKGLV*VGESCP Trigger: TGGACAGCTTTCTCCTACTCAGACGAGTCCCTTACA...CGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGTTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCGCCAATGCTAAAATTTaGAGGTGCATTTGTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: GNDAAIFIENSTGTEPVSANAKI*RCICSW Trigger: CCAGGAACAAATGCACCTTCAAATTTTAGCATTGGC...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | ACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCCTTCGAACTCCAAAGTGAGTaGAGTGGCTGCACAGACAAA | + |
Preference number: 4 (lower is better) Translates to: TQISSWGSPLKAYNFNAFELQSE*SGCTDK Trigger: TTTGTCTGTGCAGCCACTTCACTCACTTTGGAGTTC...GAAGGCGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCACCTTATCAATAACCTaGTGGACGGGAATGATTGAC | + |
Preference number: 4 (lower is better) Translates to: GNDAAIFIENSTGTEPVSTLSIT*WTGMID Trigger: GTCAATCATTCCCGTCCATCAGGTTATTGATAAGGT...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCGTTTGTCAGCTCTGCTaGAGGAAGCTGGATCAGGTA | + |
Preference number: 4 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLVCQLC*RKLDQV Trigger: TACCTGATCCAGCTTCCTGCAGCAGAGCTGACAAAC...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | ACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCCTTCTGGAGGGATAATCCCTaGGCAGCTTCTCAAAAGCAA | + |
Preference number: 4 (lower is better) Translates to: TQISSWGSPLKAYNFNAFWRDNP*AASQKQ Trigger: TTGCTTTTGAGAAGCTGCGCAGGGATTATCCCTCCA...GAAGGCGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | CACTCTTCTGAGGAGGCAAATGAGAGCCACAGACTTGTAACTGAAGGCAAAATTGCCATTCTGCTACTTTaGTCTGCACTTTTACTTCAG | + |
Preference number: 4 (lower is better) Translates to: HSSEEANESHRLVTEGKIAILLL*SALLLQ Trigger: CTGAAGTAAAAGTGCAGACCAAAGTAGCAGAATGGC...AATTTTGCCTTCAGTTACAAGTCTGTGGCTCTCATTTGCCTCCTCAGAAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CCA 90 bp | CACTCTTCTGAGGAGGCAAATGAGAGCCACAGACTTGTAACTGAAGGCAAAATTAAAGCCAGGCTTGTTTaGACATGGTTGTTTGTAGAC | + |
Preference number: 4 (lower is better) Translates to: HSSEEANESHRLVTEGKIKARLV*TWLFVD Trigger: GTCTACAAACAACCATGTCCAAACAAGCCTGGCTTT...AATTTTGCCTTCAGTTACAAGTCTGTGGCTCTCATTTGCCTCCTCAGAAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CCA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCAAAGCCAGGCTTGTTTaGACATGGTTGTTTGTAGAC | + |
Preference number: 4 (lower is better) Translates to: GNDAAIFIENSTGTEPVSKARLV*TWLFVD Trigger: GTCTACAAACAACCATGTCCAAACAAGCCTGGCTTT...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACGATTCATCAGGATTTTaGAGGGATAATCCCTGCGCA | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHDSSGF*RDNPCA Trigger: TGCGCAGGGATTATCCCTCCAAAATCCTGATGAATC...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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3UTR CAA 72 bp | ATCTCAAAAGTGTGTTCTTTAAACAGTGAGAGGCCATaGCATGGAGTGCTTAATGGGAACTCTCATCCCTCT | + |
Preference number: 4 (lower is better) Translates to: ISKVCSLNSERP*HGVLNGNSHPS Trigger: AGAGGGATGAGAGTTCCCATTAAGCACTCCATGCAATGGCCTCTCACTGTTTAAAGAACACACTTTTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR TCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACTGTTCACGATCCGTTTaGCCTTTTCTACAATGCTGT | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHCSRSV*PFLQCC Trigger: ACAGCATTGTAGAAAAGGTCAAACGGATCGTGAACA...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACACGAGGACTTTTCTTTaGGATCCAACATCCTGGAAA | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHTRTFL*DPTSWK Trigger: TTTCCAGGATGTTGGATCTCAAAGAAAAGTCCTCGT...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCTGGAGAAGAGGTACATaGAAGGAATATTTAAGGGTC | + |
Preference number: 4 (lower is better) Translates to: GNDAAIFIENSTGTEPVSWRRGT*KEYLRV Trigger: GACCCTTAAATATTCCTTTCATGTACCTCTTCTCCA...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | ACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCCTTCCTTGAAAAGGACACATaGATCTCATTCACGCTGGAG | + |
Preference number: 4 (lower is better) Translates to: TQISSWGSPLKAYNFNAFLEKDT*ISFTLE Trigger: CTCCAGCGTGAATGAGATGCATGTGTCCTTTTCAAG...GAAGGCGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | GCTAAACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGGAGCTTGGGTTGAGATaGTCCAAAAGTCATTGTGCC | + |
Preference number: 4 (lower is better) Translates to: AKLKFLLGVLLSRPIILTELGLR*SKSHCA Trigger: GGCACAATGACTTTTGGAGCATCTCAACCCAAGCTC...CGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGTTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | CCGATTCTGATGAGTTTGATTCAATTACAGTCTAAGAAGTCCTGTATTCTTGCCTGGAGGGATAATCCCTaGGCAGCTTCTCAAAAGCAA | + |
Preference number: 4 (lower is better) Translates to: PILMSLIQLQSKKSCILAWRDNP*AASQKQ Trigger: TTGCTTTTGAGAAGCTGCGCAGGGATTATCCCTCCA...GGCAAGAATACAGGACTTCTTAGACTGTAATTGAATCAAACTCATCAGAATCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCTTCCTCCCACAGATCTaGACCATGACCACAATGAAC | + |
Preference number: 4 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLFLPQI*TMTTMN Trigger: GTTCATTGTGGTCATGGTGCAGATCTGTGGGAGGAA...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACTGCCCATCACCAGTTTaGTTTAAAATCTCATTGGCC | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHCPSPV*FKISLA Trigger: GGCCAATGAGATTTTAAACCAAACTGGTGATGGGCA...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | CAGTCTAAGAAGTCCTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTGAACGATTCATTATTGCTTaGAAGGCCAATGCTAAAATT | + |
Preference number: 4 (lower is better) Translates to: QSKKSCILAGLRVFSALERFIIA*KANAKI Trigger: AATTTTAGCATTGGCCTTCCAAGCAATAATGAATCG...TTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAGGACTTCTTAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | ATAAATATGTACAGAAGAGACATTGCCAAAGGTACTCTACACAGTAAGAAACAGCAATGTACATGTGGATaGCTTCCAGCCCCATCCAGG | + |
Preference number: 4 (lower is better) Translates to: INMYRRDIAKGTLHSKKQQCTCG*LPAPSR Trigger: CCTGGATGGGGCTGGAAGCCATCCACATGTACATTG...CTGTTTCTTACTGTGTAGAGTACCTTTGGCAATGTCTCTTCTGTACATATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR GCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACGTTCAGGAATGGAGATaGTTTTTGCAACTGATACCT | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHVQEWR*FLQLIP Trigger: AGGTATCAGTTGCAAAAAGCATCTCCATTCCTGAAC...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCCCACAGAATTTTGTCTaGCTCTCTCCATTATCGAGG | + |
Preference number: 4 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLPQNFV*LSPLSR Trigger: CCTCGATAATGGAGAGAGCCAGACAAAATTCTGTGG...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCTTGCAGCTGAGAAAATaGCAGATATTCCGCACCCAA | + |
Preference number: 4 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLLQLRK*QIFRTQ Trigger: TTGGGTGCGGAATATCTGCCATTTTCTCAGCTGCAA...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAAGAGCAATGTACATGTaGATGGCTTCCAGCCCCATC | + |
Preference number: 4 (lower is better) Translates to: TEKGNDAAIFIENSTGTERAMYM*MASSPI Trigger: GATGGGGCTGGAAGCCATCCACATGTACATTGCTCT...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCCCAATTCTGAAAGGTTaGATTGAGCCATTCTGCTAC | + |
Preference number: 4 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLPILKG*IEPFCY Trigger: GTAGCAGAATGGCTCAATTCAACCTTTCAGAATTGG...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCGCCAATGCTAAAATTTaGAGGTGCATTTGTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLANAKI*RCICSW Trigger: CCAGGAACAAATGCACCTTCAAATTTTAGCATTGGC...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAAAGGCACAGATAGGATaGTGCACTTCCTGTGTTCTG | + |
Preference number: 4 (lower is better) Translates to: TEKGNDAAIFIENSTGTEKAQIG*CTSCVL Trigger: CAGAACACAGGAAGTGCATCATCCTATCTGTGCCTT...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAGAACTCCAAAGTGAGTaGAGTGGCTGCACAGACAAA | + |
Preference number: 4 (lower is better) Translates to: TEKGNDAAIFIENSTGTEELQSE*SGCTDK Trigger: TTTGTCTGTGCAGCCACTTCACTCACTTTGGAGTTC...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | AAGCCTAACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGCAGACCCCAGCCTATaGTGCAGAATTTTAGAATAT | + |
Preference number: 4 (lower is better) Translates to: KPNYEVWYMRAKLKFLLGADPSL*CRILEY Trigger: ATATTCTAAAATTCTGCATCATAGGCTGGGGTCTGC...CCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | ACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCCTTCGTGGCTGAAGGCATCTaGCAGGATGATATTTTTATA | + |
Preference number: 4 (lower is better) Translates to: TQISSWGSPLKAYNFNAFVAEGI*QDDIFI Trigger: TATAAAAATATCATCCTGTCAGATGCCTTCAGCCAC...GAAGGCGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | CCGATTCTGATGAGTTTGATTCAATTACAGTCTAAGAAGTCCTGTATTCTTGCCCTCCAAAAGTCATTGTaGCAGTCTATGACATTCCCA | + |
Preference number: 4 (lower is better) Translates to: PILMSLIQLQSKKSCILALQKSL*QSMTFP Trigger: TGGGAATGTCATAGACTGGCACAATGACTTTTGGAG...GGCAAGAATACAGGACTTCTTAGACTGTAATTGAATCAAACTCATCAGAATCGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACGATGGTGGAATCACATaGAACTGTTTCATAGTTCTT | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHDGGIT*NCFIVL Trigger: AAGAACTATGAAACAGTTCCATGTGATTCCACCATC...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | GCTAAACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGGATACTAAAGTCACTTaGAAAGGACACATGCATCTC | + |
Preference number: 4 (lower is better) Translates to: AKLKFLLGVLLSRPIILTDTKVT*KGHMHL Trigger: GAGATGCATGTGTCCTTTTCAAGTGACTTTAGTATC...CGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGTTTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAGCTCCAAGTTTTCTGTaGAGATGTCCTCTTTGTCCT | + |
Preference number: 4 (lower is better) Translates to: TEKGNDAAIFIENSTGTEAPSFL*RCPLCP Trigger: AGGACAAAGAGGACATCTTCACAGAAAACTTGGAGC...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | GCTAAACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGAGTCATAGATACAGTTaGGAGCTTCTTCAATGTCGA | + |
Preference number: 4 (lower is better) Translates to: AKLKFLLGVLLSRPIILTSHRYS*ELLQCR Trigger: TCGACATTGAAGAAGCTCCCAACTGTATCTATGACT...CGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGTTTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACGGTTTAAAATCTCATTaGCCACTTCATTTGATTGTC | + |
Preference number: 4 (lower is better) Translates to: AIFIENSTGTEPVSIQRHGLKSH*PLHLIV Trigger: GACAATCAAATGAAGTGGCCAATGAGATTTTAAACC...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAACGAGGACTTTTCTTTaGGATCCAACATCCTGGAAA | + |
Preference number: 4 (lower is better) Translates to: TEKGNDAAIFIENSTGTETRTFL*DPTSWK Trigger: TTTCCAGGATGTTGGATCTCAAAGAAAAGTCCTCGT...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR TCA 90 bp | GCTAAACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGAACCTTGTAATGAATTaGAGATGGAGAAGAGGTACA | + |
Preference number: 4 (lower is better) Translates to: AKLKFLLGVLLSRPIILTNLVMN*RWRRGT Trigger: TGTACCTCTTCTCCATCTTCAATTCATTACAAGGTT...CGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGTTTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | ATAAATATGTACAGAAGAGACATTGCCAAAGGTACTCTACACAGTAAGAAACAGCTCCAAAAGTCATTGTaGCAGTCTATGACATTCCCA | + |
Preference number: 4 (lower is better) Translates to: INMYRRDIAKGTLHSKKQLQKSL*QSMTFP Trigger: TGGGAATGTCATAGACTGGCACAATGACTTTTGGAG...CTGTTTCTTACTGTGTAGAGTACCTTTGGCAATGTCTCTTCTGTACATATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCGATGGTGGAATCACATaGAACTGTTTCATAGTTCTT | + |
Preference number: 4 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLDGGIT*NCFIVL Trigger: AAGAACTATGAAACAGTTCCATGTGATTCCACCATC...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCTTGAATTGGAGCCAATaGAGCTTGAAGACAAAGATT | + |
Preference number: 4 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLLNWSQ*SLKTKI Trigger: AATCTTTGTCTTCAAGCTCCATTGGCTCCAATTCAA...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
||
CDS-3UTR TCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAGATACTAAAGTCACTTaGAAAGGACACATGCATCTC | + |
Preference number: 4 (lower is better) Translates to: TEKGNDAAIFIENSTGTEDTKVT*KGHMHL Trigger: GAGATGCATGTGTCCTTTTCAAGTGACTTTAGTATC...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR GCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAGTTCAGGAATGGAGATaGTTTTTGCAACTGATACCT | + |
Preference number: 4 (lower is better) Translates to: TEKGNDAAIFIENSTGTEVQEWR*FLQLIP Trigger: AGGTATCAGTTGCAAAAAGCATCTCCATTCCTGAAC...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAAGTCATAGATACAGTTaGGAGCTTCTTCAATGTCGA | + |
Preference number: 4 (lower is better) Translates to: TEKGNDAAIFIENSTGTESHRYS*ELLQCR Trigger: TCGACATTGAAGAAGCTCCCAACTGTATCTATGACT...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | AAGCCTAACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGGTTTAAAATCTCATTaGCCACTTCATTTGATTGTC | + |
Preference number: 4 (lower is better) Translates to: KPNYEVWYMRAKLKFLLGGLKSH*PLHLIV Trigger: GACAATCAAATGAAGTGGCCAATGAGATTTTAAACC...CCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | GTTTGCCCTCACAGTTGCTTTACCTGTCATATTCAACAATATCACTACAGAAAAATTCTCAAGCAAATTTaGAGGCAAAATCACAGATGC | + |
Preference number: 4 (lower is better) Translates to: VCPHSCFTCHIQQYHYRKILKQI*RQNHRC Trigger: GCATCTGTGATTTTGCCTCCAAATTTGCTTGAGAAT...TTTTCTGTAGTGATATTGTTGAATATGACAGGTAAAGCAACTGTGAGGGCAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CCA 90 bp | GTTTGCCCTCACAGTTGCTTTACCTGTCATATTCAACAATATCACTACAGAAAACGATTCATTATTGCTTaGAAGGCCAATGCTAAAATT | + |
Preference number: 4 (lower is better) Translates to: VCPHSCFTCHIQQYHYRKRFIIA*KANAKI Trigger: AATTTTAGCATTGGCCTTCCAAGCAATAATGAATCG...TTTTCTGTAGTGATATTGTTGAATATGACAGGTAAAGCAACTGTGAGGGCAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAATTCTCAAGCAAATTTaGAGGCAAAATCACAGATGC | + |
Preference number: 4 (lower is better) Translates to: TEKGNDAAIFIENSTGTEILKQI*RQNHRC Trigger: GCATCTGTGATTTTGCCTCCAAATTTGCTTGAGAAT...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CCA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAGGATCTTTCAGATTCTaGATAGTAATGTTTCCAATG | + |
Preference number: 4 (lower is better) Translates to: TEKGNDAAIFIENSTGTEGSFRF*IVMFPM Trigger: CATTGGAAACATTACTATCCAGAATCTGAAAGATCC...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS TCA 90 bp | GTGGTGACAGTGGGTGGTGGAGTAGAAGGAGGGCTTACAGTAGCTTaGCAGAGAGTCCCCAGTTCTGAACAGTTTGTCAGCTCTGCTGCA | + |
Preference number: 5 (lower is better) Translates to: VVTVGGGVEGGLTVA*QRVPSSEQFVSSAA Trigger: TGCAGCAGAGCTGACAAACTGTTCAGAACTGGGGACTCTCTGTCAAGCTACTGTAAGCCCTCCTTCTACTCCACCACCCACTGTCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208429.3 |
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CDS TCA 90 bp | AGTAGAAGGAGGGCTTACAGTAGCTTGACAGAGAGTCCCCAGTTCTaGACAGTTTGTCAGCTCTGCTGCAGGAAGCTGGATCAGGTAGGA | + |
Preference number: 5 (lower is better) Translates to: SRRRAYSSLTESPQF*TVCQLCCRKLDQVG Trigger: TCCTACCTGATCCAGCTTCCTGCAGCAGAGCTGACAAACTGTTCAGAACTGGGGACTCTCTGTCAAGCTACTGTAAGCCCTCCTTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208429.3 |
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CDS GCA 90 bp | CCCTCGGCTTTCAGAGCTTGGGTTGAGATGCTCCAAAAGTCATTGTaGCAGTCTATGACATTCCCAGACACACTACAGCTGAGGTTGGAG | + |
Preference number: 5 (lower is better) Translates to: PSAFRAWVEMLQKSL*QSMTFPDTLQLRLE Trigger: CTCCAACCTCAGCTGTAGTGTGTCTGGGAATGTCATAGACTGGCACAATGACTTTTGGAGCATCTCAACCCAAGCTCTGAAAGCCGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CCA 90 bp | ATGGACTCTGTTAGTAACGGGGATATTAGTGGTGACAGTGGGTGGTaGAGTAGAAGGAGGGCTTACAGTAGCTTGACAGAGAGTCCCCAG | + |
Preference number: 5 (lower is better) Translates to: MDSVSNGDISGDSGW*SRRRAYSSLTESPQ Trigger: CTGGGGACTCTCTGTCAAGCTACTGTAAGCCCTCCTTCTACTCCACCACCCACTGTCACCACTAATATCCCCGTTACTAACAGAGTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208429.3 |
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CDS-3UTR CAA 90 bp | CTCCTGCCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGTGTTCAACAAGCATCTaGAGCCAGAGATGGACAGGA | + |
Preference number: 5 (lower is better) Translates to: LLPSSRLALLKSPFVVTVCSTSI*SQRWTG Trigger: TCCTGTCCATCTCTGGCTCAAGATGCTTGTTGAACA...CACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGGCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CAA 90 bp | GCCCTCTGTAGGGTCTCATCCACTCTGATCAGAGGGCTCGGTGCAAACAGTTTTTGGAGCCAATGGAGCTaGAAGACAAAGATTTCCCCA | + |
Preference number: 5 (lower is better) Translates to: ALCRVSSTLIRGLGANSFWSQWS*KTKISP Trigger: TGGGGAAATCTTTGTCTTCAAGCTCCATTGGCTCCA...AAAACTGTTTGCACCGAGCCCTCTGATCAGAGTGGATGAGACCCTACAGAGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CAA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACACATATGTCAGGAGAGTaGCAGCTGAGAAAATGGCAG | + |
Preference number: 5 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTHMSGE*QLRKWQ Trigger: CTGCCATTTTCTCAGCTGCAACTCTCCTGACATATG...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS TCA 90 bp | TTTGTGAGGCACTCCTTGGAAGATCCATCAGAACTCCAAAGTGAGTaGAGTGGCTGCACAGACAAATGGTCTCACCAGCGTCCAAATCAG | + |
Preference number: 5 (lower is better) Translates to: FVRHSLEDPSELQSE*SGCTDKWSHQRPNQ Trigger: CTGATTTGGACGCTGGTGAGACCATTTGTCTGTGCAGCCACTTCACTCACTTTGGAGTTCTGATGGATCTTCCAAGGAGTGCCTCACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CCA 90 bp | TTTATGGACTCTGTTAGTAACGGGGATATTAGTGGTGACAGTGGGTaGTGGAGTAGAAGGAGGGCTTACAGTAGCTTGACAGAGAGTCCC | + |
Preference number: 5 (lower is better) Translates to: FMDSVSNGDISGDSG*WSRRRAYSSLTESP Trigger: GGGACTCTCTGTCAAGCTACTGTAAGCCCTCCTTCTACTCCACCACCCACTGTCACCACTAATATCCCCGTTACTAACAGAGTCCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208429.3 |
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CDS-3UTR CAA 90 bp | CTCCTGCCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGTTATCGGAGCTCTTCTaGATGATATTGGTAGCTGTC | + |
Preference number: 5 (lower is better) Translates to: LLPSSRLALLKSPFVVTVLSELF*MILVAV Trigger: GACAGCTACCAATATCATCAAGAAGAGCTCCGATAA...CACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGGCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS TCA 90 bp | ATTACTGGCCTTTTCAAGACTGAGCAGCTGTGTAAGGGACTCGTCTaGGTAGGAGAAAGCTGTCCAGTCACCACCTTCATTGCCAACTTT | + |
Preference number: 5 (lower is better) Translates to: ITGLFKTEQLCKGLV*VGESCPVTTFIANF Trigger: AAAGTTGGCAATGAAGGTGGTGACTGGACAGCTTTCTCCTACTCAGACGAGTCCCTTACACAGCTGCTCAGTCTTGAAAAGGCCAGTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACAAGCCATTCTGCTACTTaGGTCTGCACTTTTACTTCA | + |
Preference number: 5 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTSHSAT*VCTFTS Trigger: TGAAGTAAAAGTGCAGACCAAAGTAGCAGAATGGCT...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACACATTGGCCACTTCATTaGATTGTCTTGAACAGTTGG | + |
Preference number: 5 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTHWPLH*IVLNSW Trigger: CCAACTGTTCAAGACAATCAAATGAAGTGGCCAATG...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS TCA 90 bp | AGATATTCGATACATTATTCCGTCTTGACAGAGAGTCCCCAGTTCTaGACAGTTTGTCAGCTCTGCTGCAGGAAGCTGGATCAGGTAGGA | + |
Preference number: 5 (lower is better) Translates to: RYSIHYSVLTESPQF*TVCQLCCRKLDQVG Trigger: TCCTACCTGATCCAGCTTCCTGCAGCAGAGCTGACAAACTGTTCAGAACTGGGGACTCTCTGTCAAGACGGAATAATGTATCGAATATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CAGTCTAAGAAGTCCTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTGAATTCACAGGTAACGCATaGTTCAACAAGCATCTTGAG | + |
Preference number: 5 (lower is better) Translates to: QSKKSCILAGLRVFSALEFTGNA*FNKHLE Trigger: CTCAAGATGCTTGTTGAACAATGCGTTACCTGTGAA...TTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAGGACTTCTTAGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | AGATGCAGTCAGTCCTCTAAGCTCTGCAGTTCCCTACAGAGCAGCACACTGACACTTCATTTGATTGTCTaGAACAGTTGGAAGTGTCAA | + |
Preference number: 5 (lower is better) Translates to: RCSQSSKLCSSLQSSTLTLHLIV*NSWKCQ Trigger: TTGACACTTCCAACTGTTCAAGACAATCAAATGAAG...TGTCAGTGTGCTGCTCTGTAGGGAACTGCAGAGCTTAGAGGACTGACTGCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CCTTCTAGCAGGCTGGCTCTGCTAAAATCTCCCTTTGTGGTCACTGTGCTATCTCCGAAACTTTTGTTTTaGTTCATATCCCAGAAGGCA | + |
Preference number: 5 (lower is better) Translates to: PSSRLALLKSPFVVTVLSPKLLF*FISQKA Trigger: TGCCTTCTGGGATATGAACAAAAACAAAAGTTTCGG...AGATAGCACAGTGACCACAAAGGGAGATTTTAGCAGAGCCAGCCTGCTAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS TCA 90 bp | CGCTCCACAGAATTTTGTCTGGCTCTCTCCATTATCGAGGGACAATaGGTCATAGATACAGTTGGGAGCTTCTTCAATGTCGAAGTCATT | + |
Preference number: 5 (lower is better) Translates to: RSTEFCLALSIIEGQ*VIDTVGSFFNVEVI Trigger: AATGACTTCGACATTGAAGAAGCTCCCAACTGTATCTATGACTCATTGTCCCTCGATAATGGAGAGAGCCAGACAAAATTCTGTGGAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CCGATTCTGATGAGTTTGATTCAATTACAGTCTAAGAAGTCCTGTATTCTTGCCACACTACAGCTGAGGTaGGAGAGGGCTTTCAGATCC | + |
Preference number: 5 (lower is better) Translates to: PILMSLIQLQSKKSCILATLQLR*ERAFRS Trigger: GGATCTGAAAGCCCTCTCCAACCTCAGCTGTAGTGT...GGCAAGAATACAGGACTTCTTAGACTGTAATTGAATCAAACTCATCAGAATCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCACACTACAGCTGAGGTaGGAGAGGGCTTTCAGATCC | + |
Preference number: 5 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLTLQLR*ERAFRS Trigger: GGATCTGAAAGCCCTCTCCAACCTCAGCTGTAGTGT...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCCTTTCAGAGCTTGGGTaGAGATGCTCCAAAAGTCAT | + |
Preference number: 5 (lower is better) Translates to: GNDAAIFIENSTGTEPVSLSELG*RCSKSH Trigger: ATGACTTTTGGAGCATCTCAACCCAAGCTCTGAAAG...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CAGTCTAAGAAGTCCTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTGAAAAGTACGATTCATTATaGCTTGGAAGGCCAATGCTA | + |
Preference number: 5 (lower is better) Translates to: QSKKSCILAGLRVFSALEKYDSL*LGRPML Trigger: TAGCATTGGCCTTCCAAGCAATAATGAATCGTACTT...TTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAGGACTTCTTAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CAGTCTAAGAAGTCCTGTATTCTTGCCGGGCTCAGAGTGTTCTCAGCTCTTGAATGGAAAAGTCCGGTTTaGTTGAAGAAAGTGAACTGT | + |
Preference number: 5 (lower is better) Translates to: QSKKSCILAGLRVFSALEWKSPV*LKKVNC Trigger: ACAGTTCACTTTCTTCAACAAAACCGGACTTTTCCA...TTCAAGAGCTGAGAACACTCTGAGCCCGGCAAGAATACAGGACTTCTTAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS TCA 90 bp | CCCAAGAATTATTCCACACAAGACAGAGCTGCTCCAAGTTTTCTGTaGAGATGTCCTCTTTGTCCTTCACAGGTAACGCATTGTTCAACA | + |
Preference number: 5 (lower is better) Translates to: PKNYSTQDRAAPSFL*RCPLCPSQVTHCST Trigger: TGTTGAACAATGCGTTACCTGTGAAGGACAAAGAGGACATCTTCACAGAAAACTTGGAGCAGCTCTGTCTTGTGTGGAATAATTCTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS GCA 90 bp | TTGAAACCTTTCTTCTGGATACTAAAGTCACTTGAAAAGGACACATaGATCTCATTCACGCTGGAGTTAAATGACAGGCCCTTGGCAGTC | + |
Preference number: 5 (lower is better) Translates to: LKPFFWILKSLEKDT*ISFTLELNDRPLAV Trigger: GACTGCCAAGGGCCTGTCATTTAACTCCAGCGTGAATGAGATGCATGTGTCCTTTTCAAGTGACTTTAGTATCCAGAAGAAAGGTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CCGATTCTGATGAGTTTGATTCAATTACAGTCTAAGAAGTCCTGTATTCTTGCCTTAAATGACAGGCCCTaGGCAGTCGCTCCACAGAAT | + |
Preference number: 5 (lower is better) Translates to: PILMSLIQLQSKKSCILALNDRP*AVAPQN Trigger: ATTCTGTGGAGCGACTGCCAAGGGCCTGTCATTTAA...GGCAAGAATACAGGACTTCTTAGACTGTAATTGAATCAAACTCATCAGAATCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | ACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCCTTCCCTTCATTGCCAACTTaGGAGGCTTCAAAACAGAGC | + |
Preference number: 5 (lower is better) Translates to: TQISSWGSPLKAYNFNAFPSLPT*EASKQS Trigger: GCTCTGTTTTGAAGCCTCCAAAGTTGGCAATGAAGG...GAAGGCGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | AAGCCTAACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGCAGTCACCACCTTCATaGCCAACTTTGGAGGCTTCA | + |
Preference number: 5 (lower is better) Translates to: KPNYEVWYMRAKLKFLLGQSPPS*PTLEAS Trigger: TGAAGCCTCCAAAGTTGGCAATGAAGGTGGTGACTG...CCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATGCTCCAAAAGTCATaGTGCCAGTCTATGACATTC | + |
Preference number: 5 (lower is better) Translates to: GNDAAIFIENSTGTEPVSMLQKS*CQSMTF Trigger: GAATGTCATAGACTGGCACAATGACTTTTGGAGCAT...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCAGCCATTCTGCTACTTaGGTCTGCACTTTTACTTCA | + |
Preference number: 5 (lower is better) Translates to: GNDAAIFIENSTGTEPVSSHSAT*VCTFTS Trigger: TGAAGTAAAAGTGCAGACCAAAGTAGCAGAATGGCT...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS CCA 90 bp | ATGCTGTTGATATTAGCCGAGGTGAGGTTCTGCCCATCACCAGTTTaGTTTAAAATCTCATTGGCCACTTCATTTGATTGTCTTGAACAG | + |
Preference number: 5 (lower is better) Translates to: MLLILAEVRFCPSPV*FKISLATSFDCLEQ Trigger: CTGTTCAAGACAATCAAATGAAGTGGCCAATGAGATTTTAAACCAAACTGGTGATGGGCAGAACCTCACCTCGGCTAATATCAACAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | ATAAATATGTACAGAAGAGACATTGCCAAAGGTACTCTACACAGTAAGAAACAGAAGGTACCGGAAGGATaGGACAGGACAAGTCTGCAG | + |
Preference number: 5 (lower is better) Translates to: INMYRRDIAKGTLHSKKQKVPEG*DRTSLQ Trigger: CTGCAGACTTGTCCTGTCCAATCCTTCCGGTACCTT...CTGTTTCTTACTGTGTAGAGTACCTTTGGCAATGTCTCTTCTGTACATATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CAA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAAAGGTACCGGAAGGATaGGACAGGACAAGTCTGCAG | + |
Preference number: 5 (lower is better) Translates to: TEKGNDAAIFIENSTGTEKVPEG*DRTSLQ Trigger: CTGCAGACTTGTCCTGTCCAATCCTTCCGGTACCTT...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCTGTTCAACAAGCATCTaGAGCCAGAGATGGACAGGA | + |
Preference number: 5 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLCSTSI*SQRWTG Trigger: TCCTGTCCATCTCTGGCTCAAGATGCTTGTTGAACA...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CCGATTCTGATGAGTTTGATTCAATTACAGTCTAAGAAGTCCTGTATTCTTGCCGTGAAGATGTCCTCTTaGTCCTTCACAGGTAACGCA | + |
Preference number: 5 (lower is better) Translates to: PILMSLIQLQSKKSCILAVKMSS*SFTGNA Trigger: TGCGTTACCTGTGAAGGACAAAGAGGACATCTTCAC...GGCAAGAATACAGGACTTCTTAGACTGTAATTGAATCAAACTCATCAGAATCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | AAGCCTAACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTGAAGATGTCCTCTTaGTCCTTCACAGGTAACGCA | + |
Preference number: 5 (lower is better) Translates to: KPNYEVWYMRAKLKFLLGVKMSS*SFTGNA Trigger: TGCGTTACCTGTGAAGGACAAAGAGGACATCTTCAC...CCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | ACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGCCTTCTCCATGATGTCTCTCTaGACTTTCATCCTGTCCTCT | + |
Preference number: 5 (lower is better) Translates to: TQISSWGSPLKAYNFNAFSMMSL*TFILSS Trigger: AGAGGACAGGATGAAAGTCAAGAGAGACATCATGGA...GAAGGCGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CACTCTTCTGAGGAGGCAAATGAGAGCCACAGACTTGTAACTGAAGGCAAAATTAATTTGAAGGTGCATTaGTTCCTGGAATTAGGGATG | + |
Preference number: 5 (lower is better) Translates to: HSSEEANESHRLVTEGKINLKVH*FLELGM Trigger: CATCCCTAATTCCAGGAACAAATGCACCTTCAAATT...AATTTTGCCTTCAGTTACAAGTCTGTGGCTCTCATTTGCCTCCTCAGAAGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CAA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCTGGAGCCAATGGAGCTaGAAGACAAAGATTTCCCCA | + |
Preference number: 5 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLWSQWS*KTKISP Trigger: TGGGGAAATCTTTGTCTTCAAGCTCCATTGGCTCCA...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCGAGCTGGACTTTGATTaGGATGTGAGATATGTTGAA | + |
Preference number: 5 (lower is better) Translates to: GNDAAIFIENSTGTEPVSELDFD*DVRYVE Trigger: TTCAACATATCTCACATCCAAATCAAAGTCCAGCTC...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | ATAAATATGTACAGAAGAGACATTGCCAAAGGTACTCTACACAGTAAGAAACAGTTAAATGACAGGCCCTaGGCAGTCGCTCCACAGAAT | + |
Preference number: 5 (lower is better) Translates to: INMYRRDIAKGTLHSKKQLNDRP*AVAPQN Trigger: ATTCTGTGGAGCGACTGCCAAGGGCCTGTCATTTAA...CTGTTTCTTACTGTGTAGAGTACCTTTGGCAATGTCTCTTCTGTACATATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CAA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACAGTCACCACCTTCATaGCCAACTTTGGAGGCTTCA | + |
Preference number: 5 (lower is better) Translates to: TEKGNDAAIFIENSTGTEQSPPS*PTLEAS Trigger: TGAAGCCTCCAAAGTTGGCAATGAAGGTGGTGACTG...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CCGATTCTGATGAGTTTGATTCAATTACAGTCTAAGAAGTCCTGTATTCTTGCCCTTTCAGAGCTTGGGTaGAGATGCTCCAAAAGTCAT | + |
Preference number: 5 (lower is better) Translates to: PILMSLIQLQSKKSCILALSELG*RCSKSH Trigger: ATGACTTTTGGAGCATCTCAACCCAAGCTCTGAAAG...GGCAAGAATACAGGACTTCTTAGACTGTAATTGAATCAAACTCATCAGAATCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | GGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCCTTCATTTGATTGTCTaGAACAGTTGGAAGTGTCAA | + |
Preference number: 5 (lower is better) Translates to: GNDAAIFIENSTGTEPVSLHLIV*NSWKCQ Trigger: TTGACACTTCCAACTGTTCAAGACAATCAAATGAAG...GCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACTCAATGTTTTCTTCTTaGTTCACGATCCGTTTGACC | + |
Preference number: 5 (lower is better) Translates to: AIFIENSTGTEPVSIQRHSMFSS*FTIRLT Trigger: GGTCAAACGGATCGTGAACAAAGAAGAAAACATTGA...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | GCTATATTCATAGAAAATAGCACTGGAACAGAACCCGTGAGCATCCAAAGACACAAGTACGATTCATTATaGCTTGGAAGGCCAATGCTA | + |
Preference number: 5 (lower is better) Translates to: AIFIENSTGTEPVSIQRHKYDSL*LGRPML Trigger: TAGCATTGGCCTTCCAAGCAATAATGAATCGTACTT...GTGTCTTTGGATGCTCACGGGTTCTGTTCCAGTGCTATTTTCTATGAATATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | GTTTGCCCTCACAGTTGCTTTACCTGTCATATTCAACAATATCACTACAGAAAACATATGTCAGGAGAGTaGCAGCTGAGAAAATGGCAG | + |
Preference number: 5 (lower is better) Translates to: VCPHSCFTCHIQQYHYRKHMSGE*QLRKWQ Trigger: CTGCCATTTTCTCAGCTGCAACTCTCCTGACATATG...TTTTCTGTAGTGATATTGTTGAATATGACAGGTAAAGCAACTGTGAGGGCAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CAA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCGAATGGAGATGCTTTTaGCAACTGATACCTGGTAAG | + |
Preference number: 5 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLEWRCF*QLIPGK Trigger: CTTACCAGGTATCAGTTGCAAAAAGCATCTCCATTC...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | ATAAATATGTACAGAAGAGACATTGCCAAAGGTACTCTACACAGTAAGAAACAGCCTTCATTGCCAACTTaGGAGGCTTCAAAACAGAGC | + |
Preference number: 5 (lower is better) Translates to: INMYRRDIAKGTLHSKKQPSLPT*EASKQS Trigger: GCTCTGTTTTGAAGCCTCCAAAGTTGGCAATGAAGG...CTGTTTCTTACTGTGTAGAGTACCTTTGGCAATGTCTCTTCTGTACATATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CAA 90 bp | AACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGGTTCTCTTCACAGGTAACGCATaGTTCAACAAGCATCTTGAG | + |
Preference number: 5 (lower is better) Translates to: NYEVWYMRAKLKFLLGVLFTGNA*FNKHLE Trigger: CTCAAGATGCTTGTTGAACAATGCGTTACCTGTGAA...GAGAACCCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | GCTAAACTCAAATTTCTTCTTGGGGTTCTCCTCTCAAGGCCTATAATTTTAACGGTGAGATATGTTGAATaGGAGCCAATGGAGCTTGAA | + |
Preference number: 5 (lower is better) Translates to: AKLKFLLGVLLSRPIILTVRYVE*EPMELE Trigger: TTCAAGCTCCATTGGCTCCAATTCAACATATCTCAC...CGTTAAAATTATAGGCCTTGAGAGGAGAACCCCAAGAAGAAATTTGAGTTTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | ATAAATATGTACAGAAGAGACATTGCCAAAGGTACTCTACACAGTAAGAAACAGTCCATGATGTCTCTCTaGACTTTCATCCTGTCCTCT | + |
Preference number: 5 (lower is better) Translates to: INMYRRDIAKGTLHSKKQSMMSL*TFILSS Trigger: AGAGGACAGGATGAAAGTCAAGAGAGACATCATGGA...CTGTTTCTTACTGTGTAGAGTACCTTTGGCAATGTCTCTTCTGTACATATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CAA 90 bp | AAGCCTAACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGAATTTGAAGGTGCATTaGTTCCTGGAATTAGGGATG | + |
Preference number: 5 (lower is better) Translates to: KPNYEVWYMRAKLKFLLGNLKVH*FLELGM Trigger: CATCCCTAATTCCAGGAACAAATGCACCTTCAAATT...CCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CCGATTCTGATGAGTTTGATTCAATTACAGTCTAAGAAGTCCTGTATTCTTGCCAAAAGTCCGGTTTTGTaGAAGAAAGTGAACTGTGCT | + |
Preference number: 5 (lower is better) Translates to: PILMSLIQLQSKKSCILAKSPVL*KKVNCA Trigger: AGCACAGTTCACTTTCTTCAACAAAACCGGACTTTT...GGCAAGAATACAGGACTTCTTAGACTGTAATTGAATCAAACTCATCAGAATCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | AAGCCTAACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGAAAAGTCCGGTTTTGTaGAAGAAAGTGAACTGTGCT | + |
Preference number: 5 (lower is better) Translates to: KPNYEVWYMRAKLKFLLGKSPVL*KKVNCA Trigger: AGCACAGTTCACTTTCTTCAACAAAACCGGACTTTT...CCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | ATAAATATGTACAGAAGAGACATTGCCAAAGGTACTCTACACAGTAAGAAACAGCACGAGGACTTTTCTTaGAGATCCAACATCCTGGAA | + |
Preference number: 5 (lower is better) Translates to: INMYRRDIAKGTLHSKKQHEDFS*RSNILE Trigger: TTCCAGGATGTTGGATCTCAAAGAAAAGTCCTCGTG...CTGTTTCTTACTGTGTAGAGTACCTTTGGCAATGTCTCTTCTGTACATATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CAA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACACGAGGACTTTTCTTaGAGATCCAACATCCTGGAA | + |
Preference number: 5 (lower is better) Translates to: TEKGNDAAIFIENSTGTEHEDFS*RSNILE Trigger: TTCCAGGATGTTGGATCTCAAAGAAAAGTCCTCGTG...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | AAGCCTAACTATGAGGTGTGGTATATGAGAGCTAAACTCAAATTTCTTCTTGGGCCGAAACTTTTGTTTTaGTTCATATCCCAGAAGGCA | + |
Preference number: 5 (lower is better) Translates to: KPNYEVWYMRAKLKFLLGPKLLF*FISQKA Trigger: TGCCTTCTGGGATATGAACAAAAACAAAAGTTTCGG...CCCAAGAAGAAATTTGAGTTTAGCTCTCATATACCACACCTCATAGTTAGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | CCGATTCTGATGAGTTTGATTCAATTACAGTCTAAGAAGTCCTGTATTCTTGCCGAGCTGGACTTTGATTaGGATGTGAGATATGTTGAA | + |
Preference number: 5 (lower is better) Translates to: PILMSLIQLQSKKSCILAELDFD*DVRYVE Trigger: TTCAACATATCTCACATCCAAATCAAAGTCCAGCTC...GGCAAGAATACAGGACTTCTTAGACTGTAATTGAATCAAACTCATCAGAATCGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAACATTGGCCACTTCATTaGATTGTCTTGAACAGTTGG | + |
Preference number: 5 (lower is better) Translates to: TEKGNDAAIFIENSTGTEHWPLH*IVLNSW Trigger: CCAACTGTTCAAGACAATCAAATGAAGTGGCCAATG...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | GTTTGCCCTCACAGTTGCTTTACCTGTCATATTCAACAATATCACTACAGAAAATGGAAAAGTCCGGTTTaGTTGAAGAAAGTGAACTGT | + |
Preference number: 5 (lower is better) Translates to: VCPHSCFTCHIQQYHYRKWKSPV*LKKVNC Trigger: ACAGTTCACTTTCTTCAACAAAACCGGACTTTTCCA...TTTTCTGTAGTGATATTGTTGAATATGACAGGTAAAGCAACTGTGAGGGCAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041168.6 |
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CDS-3UTR CAA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAATTATCGGAGCTCTTCTaGATGATATTGGTAGCTGTC | + |
Preference number: 5 (lower is better) Translates to: TEKGNDAAIFIENSTGTELSELF*MILVAV Trigger: GACAGCTACCAATATCATCAAGAAGAGCTCCGATAA...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS-3UTR CAA 90 bp | ACTGAAAAAGGAAACGATGCTGCTATATTCATAGAAAATAGCACTGGAACAGAAGTGAGATATGTTGAATaGGAGCCAATGGAGCTTGAA | + |
Preference number: 5 (lower is better) Translates to: TEKGNDAAIFIENSTGTEVRYVE*EPMELE Trigger: TTCAAGCTCCATTGGCTCCAATTCAACATATCTCAC...TTCTGTTCCAGTGCTATTTTCTATGAATATAGCAGCATCGTTTCCTTTTTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS TCA 90 bp | ACTTATATTAACCACATAAACAGTGTAGTTCCAATTCTGAAAGGTTaGATTGAGCCATTCTGCTACTTTGGTCTGCACTTTTACTTCAGG | + |
Preference number: 5 (lower is better) Translates to: TYINHINSVVPILKG*IEPFCYFGLHFYFR Trigger: CCTGAAGTAAAAGTGCAGACCAAAGTAGCAGAATGGCTCAATTCAACCTTTCAGAATTGGAACTACACTGTTTATGTGGTTAATATAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS GCA 72 bp | CAGGAAGCTGGATCAGGTAGGAACCACAGCTCAGGTTaGCCTCGGCTTTCAGAGCTTGGGTTGAGATGCTCC | + |
Preference number: 6 (lower is better) Translates to: QEAGSGRNHSSG*PRLSELGLRCS Trigger: GGAGCATCTCAACCCAAGCTCTGAAAGCCGAGGGCAACCTGAGCTGTGGTTCCTACCTGATCCAGCTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS TCA 72 bp | CAAACCCCCACGTCATGCCAAGCAGGAAGGTCAGGCTaGCCACACTGCGCAGGTTTCTTAAAACCTCTTCTC | + |
Preference number: 6 (lower is better) Translates to: QTPTSCQAGRSG*PHCAGFLKPLL Trigger: GAGAAGAGGTTTTAAGAAACCTGCGCAGTGTGGTCAGCCTGACCTTCCTGCTTGGCATGACGTGGGGGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | TTCCGTCTTGACAGAGAGTCCCCAGTTCTGAACAGTTaGTCAGCTCTGCTGCAGGAAGCTGGATCAGGTAGG | + |
Preference number: 6 (lower is better) Translates to: FRLDRESPVLNS*SALLQEAGSGR Trigger: CCTACCTGATCCAGCTTCCTGCAGCAGAGCTGACAAACTGTTCAGAACTGGGGACTCTCTGTCAAGACGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041168.6 ENSMUST00000238680.2 |
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CDS CAA 72 bp | TGTTCTCCACCAGCATGGGTCAGTTTTGACAGGGACTaGTCCGTGGAAGTGCTGTCCGAGTGGCTGTTTCTT | + |
Preference number: 6 (lower is better) Translates to: CSPPAWVSFDRD*SVEVLSEWLFL Trigger: AAGAAACAGCCACTCGGACAGCACTTCCACGGACAAGTCCCTGTCAAAACTGACCCATGCTGGTGGAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238680.2 |
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CDS CAA 90 bp | ACCACACTGCGCAGGTTTCTTAAAACCTCTTCTCTCAGGGTCCGGTaGCTTCTCTTTCCATTCCTCCCACAGATCTGCACCATGACCACA | + |
Preference number: 6 (lower is better) Translates to: TTLRRFLKTSSLRVR*LLFPFLPQICTMTT Trigger: TGTGGTCATGGTGCAGATCTGTGGGAGGAATGGAAAGAGAAGCAACCGGACCCTGAGAGAAGAGGTTTTAAGAAACCTGCGCAGTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS TCA 72 bp | AGGGCTTACAGTAGCTTGACAGAGAGTCCCCAGTTCTaGACAGTTTGTCAGCTCTGCTGCAGGAAGCTGGAT | + |
Preference number: 6 (lower is better) Translates to: RAYSSLTESPQF*TVCQLCCRKLD Trigger: ATCCAGCTTCCTGCAGCAGAGCTGACAAACTGTTCAGAACTGGGGACTCTCTGTCAAGCTACTGTAAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208429.3 |
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CDS GCA 72 bp | TCTTACTCCAATCTGAGTTGTCTGCTAGCCGAAACCTaGCACAGCAGAGGTGACGCCTCCACTGTTTCTGAA | + |
Preference number: 6 (lower is better) Translates to: SYSNLSCLLAET*HSRGDASTVSE Trigger: TTCAGAAACAGTGGAGGCGTCACCTCTGCTGTGGCAGGTTTCGGCTAGCAGACAACTCAGATTGGAGTAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | TTGCCCTCGGCTTTCAGAGCTTGGGTTGAGATGCTCCAAAAGTCATaGTGCCAGTCTATGACATTCCCAGACACACTACAGCTGAGGTTG | + |
Preference number: 6 (lower is better) Translates to: LPSAFRAWVEMLQKS*CQSMTFPDTLQLRL Trigger: CAACCTCAGCTGTAGTGTGTCTGGGAATGTCATAGACTGGCACAATGACTTTTGGAGCATCTCAACCCAAGCTCTGAAAGCCGAGGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CCA 72 bp | GCCAGTGGATCTGTCTGTCCGTTCCCGAAGTCCATCTaGAAGTACGATTCATTATTGCTTGGAAGGCCAATG | + |
Preference number: 6 (lower is better) Translates to: ASGSVCPFPKSI*KYDSLLLGRPM Trigger: CATTGGCCTTCCAAGCAATAATGAATCGTACTTCCAGATGGACTTCGGGAACGGACAGACAGATCCACTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CCA 72 bp | GGAAGAGCAAGGCCGAGCTCAGATTCATCAGGATTTTaGAGGGATAATCCCTGCGCAGCTTCTCAAAAGCAA | + |
Preference number: 6 (lower is better) Translates to: GRARPSSDSSGF*RDNPCAASQKQ Trigger: TTGCTTTTGAGAAGCTGCGCAGGGATTATCCCTCCAAAATCCTGATGAATCTGAGCTCGGCCTTGCTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CCA 72 bp | GTTAGTAACGGGGATATTAGTGGTGACAGTGGGTGGTaGAGTAGAAGGAGGGCTTACAGTAGCTTGACAGAG | + |
Preference number: 6 (lower is better) Translates to: VSNGDISGDSGW*SRRRAYSSLTE Trigger: CTCTGTCAAGCTACTGTAAGCCCTCCTTCTACTCCACCACCCACTGTCACCACTAATATCCCCGTTACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208429.3 |
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CDS CAA 72 bp | TGCATCTCATTCACGCTGGAGTTAAATGACAGGCCCTaGGCAGTCGCTCCACAGAATTTTGTCTGGCTCTCT | + |
Preference number: 6 (lower is better) Translates to: CISFTLELNDRP*AVAPQNFVWLS Trigger: AGAGAGCCAGACAAAATTCTGTGGAGCGACTGCCAAGGGCCTGTCATTTAACTCCAGCGTGAATGAGATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | AAGGACACATGCATCTCATTCACGCTGGAGTTAAATGACAGGCCCTaGGCAGTCGCTCCACAGAATTTTGTCTGGCTCTCTCCATTATCG | + |
Preference number: 6 (lower is better) Translates to: KDTCISFTLELNDRP*AVAPQNFVWLSPLS Trigger: CGATAATGGAGAGAGCCAGACAAAATTCTGTGGAGCGACTGCCAAGGGCCTGTCATTTAACTCCAGCGTGAATGAGATGCATGTGTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CCA 72 bp | TCTGTTAGTAACGGGGATATTAGTGGTGACAGTGGGTaGTGGAGTAGAAGGAGGGCTTACAGTAGCTTGACA | + |
Preference number: 6 (lower is better) Translates to: SVSNGDISGDSG*WSRRRAYSSLT Trigger: TGTCAAGCTACTGTAAGCCCTCCTTCTACTCCACCACCCACTGTCACCACTAATATCCCCGTTACTAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208429.3 |
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CDS TCA 72 bp | AAAGGACACATGCATCTCATTCACGCTGGAGTTAAATaGCAGGCCCTTGGCAGTCGCTCCACAGAATTTTGT | + |
Preference number: 6 (lower is better) Translates to: KGHMHLIHAGVK*QALGSRSTEFC Trigger: ACAAAATTCTGTGGAGCGACTGCCAAGGGCCTGTCATTTAACTCCAGCGTGAATGAGATGCATGTGTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | TGTCCTTCACAGGTAACGCATTGTTCAACAAGCATCTaGAGCCAGAGATGGACAGGAAGTAGCCATTACTGG | + |
Preference number: 6 (lower is better) Translates to: CPSQVTHCSTSI*SQRWTGSSHYW Trigger: CCAGTAATGGCTACTTCCTGTCCATCTCTGGCTCAAGATGCTTGTTGAACAATGCGTTACCTGTGAAGGACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | GTGAAGATGTCCTCTTTGTCCTTCACAGGTAACGCATaGTTCAACAAGCATCTTGAGCCAGAGATGGACAGG | + |
Preference number: 6 (lower is better) Translates to: VKMSSLSFTGNA*FNKHLEPEMDR Trigger: CCTGTCCATCTCTGGCTCAAGATGCTTGTTGAACAATGCGTTACCTGTGAAGGACAAAGAGGACATCTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | GCTTTCAGAGCTTGGGTTGAGATGCTCCAAAAGTCATaGTGCCAGTCTATGACATTCCCAGACACACTACAG | + |
Preference number: 6 (lower is better) Translates to: AFRAWVEMLQKS*CQSMTFPDTLQ Trigger: CTGTAGTGTGTCTGGGAATGTCATAGACTGGCACAATGACTTTTGGAGCATCTCAACCCAAGCTCTGAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | TGCGCAGCTTCTCAAAAGCAACATATGTCAGGAGAGTaGCAGCTGAGAAAATGGCAGATATTCCGCACCCAA | + |
Preference number: 6 (lower is better) Translates to: CAASQKQHMSGE*QLRKWQIFRTQ Trigger: TTGGGTGCGGAATATCTGCCATTTTCTCAGCTGCAACTCTCCTGACATATGTTGCTTTTGAGAAGCTGCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | TGTCCTCTTTGTCCTTCACAGGTAACGCATTGTTCAACAAGCATCTaGAGCCAGAGATGGACAGGAAGTAGCCATTACTGGCCTTTTCAA | + |
Preference number: 6 (lower is better) Translates to: CPLCPSQVTHCSTSI*SQRWTGSSHYWPFQ Trigger: TTGAAAAGGCCAGTAATGGCTACTTCCTGTCCATCTCTGGCTCAAGATGCTTGTTGAACAATGCGTTACCTGTGAAGGACAAAGAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | CACACAAGACAGAGCTGCTCCAAGTTTTCTGTGAAGATGTCCTCTTaGTCCTTCACAGGTAACGCATTGTTCAACAAGCATCTTGAGCCA | + |
Preference number: 6 (lower is better) Translates to: HTRQSCSKFSVKMSS*SFTGNALFNKHLEP Trigger: TGGCTCAAGATGCTTGTTGAACAATGCGTTACCTGTGAAGGACAAAGAGGACATCTTCACAGAAAACTTGGAGCAGCTCTGTCTTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | TCATTGTGCCAGTCTATGACATTCCCAGACACACTACAGCTGAGGTaGGAGAGGGCTTTCAGATCCATGGTAAAATTCCAAAGTCGAAAG | + |
Preference number: 6 (lower is better) Translates to: SLCQSMTFPDTLQLR*ERAFRSMVKFQSRK Trigger: CTTTCGACTTTGGAATTTTACCATGGATCTGAAAGCCCTCTCCAACCTCAGCTGTAGTGTGTCTGGGAATGTCATAGACTGGCACAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CCA 72 bp | GTAACGCATTGTTCAACAAGCATCTTGAGCCAGAGATaGACAGGAAGTAGCCATTACTGGCCTTTTCAAGAC | + |
Preference number: 6 (lower is better) Translates to: VTHCSTSILSQR*TGSSHYWPFQD Trigger: GTCTTGAAAAGGCCAGTAATGGCTACTTCCTGTCCATCTCTGGCTCAAGATGCTTGTTGAACAATGCGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | CAGTCTATGACATTCCCAGACACACTACAGCTGAGGTaGGAGAGGGCTTTCAGATCCATGGTAAAATTCCAA | + |
Preference number: 6 (lower is better) Translates to: QSMTFPDTLQLR*ERAFRSMVKFQ Trigger: TTGGAATTTTACCATGGATCTGAAAGCCCTCTCCAACCTCAGCTGTAGTGTGTCTGGGAATGTCATAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | TTGTTCACGATCCGTTTGACCTTTTCTACAATGCTGTaGATATTAGCCGAGGTGAGGTTCTGCCCATCACCA | + |
Preference number: 6 (lower is better) Translates to: LFTIRLTFSTML*ILAEVRFCPSP Trigger: TGGTGATGGGCAGAACCTCACCTCGGCTAATATCAACAGCATTGTAGAAAAGGTCAAACGGATCGTGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | GAGCCGAGGGTGATGTCAATGTTTTCTTCTTTGTTCACGATCCGTTaGACCTTTTCTACAATGCTGTTGATATTAGCCGAGGTGAGGTTC | + |
Preference number: 6 (lower is better) Translates to: EPRVMSMFSSLFTIR*TFSTMLLILAEVRF Trigger: GAACCTCACCTCGGCTAATATCAACAGCATTGTAGAAAAGGTCAAACGGATCGTGAACAAAGAAGAAAACATTGACATCACCCTCGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | GAAGACAAAGATTTCCCCAGGTTATCGGAGCTCTTCTTGATGATATaGGTAGCTGTCTTACTCCAATCTGAGTTGTCTGCTAGCCGAAAC | + |
Preference number: 6 (lower is better) Translates to: EDKDFPRLSELFLMI*VAVLLQSELSASRN Trigger: GTTTCGGCTAGCAGACAACTCAGATTGGAGTAAGACAGCTACCAATATCATCAAGAAGAGCTCCGATAACCTGGGGAAATCTTTGTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS GCA 72 bp | TCTACAATGCTGTTGATATTAGCCGAGGTGAGGTTCTaGCCATCACCAGTTTGGTTTAAAATCTCATTGGCC | + |
Preference number: 6 (lower is better) Translates to: STMLLILAEVRF*PSPVWFKISLA Trigger: GGCCAATGAGATTTTAAACCAAACTGGTGATGGGCAGAACCTCACCTCGGCTAATATCAACAGCATTGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | CAGAGCTGCTCCAAGTTTTCTGTGAAGATGTCCTCTTaGTCCTTCACAGGTAACGCATTGTTCAACAAGCAT | + |
Preference number: 6 (lower is better) Translates to: QSCSKFSVKMSS*SFTGNALFNKH Trigger: ATGCTTGTTGAACAATGCGTTACCTGTGAAGGACAAAGAGGACATCTTCACAGAAAACTTGGAGCAGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | AGAGTGGAGCCGAGGGTGATGTCAATGTTTTCTTCTTaGTTCACGATCCGTTTGACCTTTTCTACAATGCTG | + |
Preference number: 6 (lower is better) Translates to: RVEPRVMSMFSS*FTIRLTFSTML Trigger: CAGCATTGTAGAAAAGGTCAAACGGATCGTGAACAAAGAAGAAAACATTGACATCACCCTCGGCTCCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | CCGTTCCCGAAGTCCATCTGGAAGTACGATTCATTATaGCTTGGAAGGCCAATGCTAAAATTTGAAGGTGCA | + |
Preference number: 6 (lower is better) Translates to: PFPKSIWKYDSL*LGRPMLKFEGA Trigger: TGCACCTTCAAATTTTAGCATTGGCCTTCCAAGCAATAATGAATCGTACTTCCAGATGGACTTCGGGAACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | GATTTCCCCAGGTTATCGGAGCTCTTCTTGATGATATaGGTAGCTGTCTTACTCCAATCTGAGTTGTCTGCT | + |
Preference number: 6 (lower is better) Translates to: DFPRLSELFLMI*VAVLLQSELSA Trigger: AGCAGACAACTCAGATTGGAGTAAGACAGCTACCAATATCATCAAGAAGAGCTCCGATAACCTGGGGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | TCTGTCTGTCCGTTCCCGAAGTCCATCTGGAAGTACGATTCATTATaGCTTGGAAGGCCAATGCTAAAATTTGAAGGTGCATTTGTTCCT | + |
Preference number: 6 (lower is better) Translates to: SVCPFPKSIWKYDSL*LGRPMLKFEGAFVP Trigger: AGGAACAAATGCACCTTCAAATTTTAGCATTGGCCTTCCAAGCAATAATGAATCGTACTTCCAGATGGACTTCGGGAACGGACAGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | ATGGAGCTTGAAGACAAAGATTTCCCCAGGTTATCGGAGCTCTTCTaGATGATATTGGTAGCTGTCTTACTCCAATCTGAGTTGTCTGCT | + |
Preference number: 6 (lower is better) Translates to: MELEDKDFPRLSELF*MILVAVLLQSELSA Trigger: AGCAGACAACTCAGATTGGAGTAAGACAGCTACCAATATCATCAAGAAGAGCTCCGATAACCTGGGGAAATCTTTGTCTTCAAGCTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS TCA 72 bp | GAATTTTGTCTGGCTCTCTCCATTATCGAGGGACAATaGGTCATAGATACAGTTGGGAGCTTCTTCAATGTC | + |
Preference number: 6 (lower is better) Translates to: EFCLALSIIEGQ*VIDTVGSFFNV Trigger: GACATTGAAGAAGCTCCCAACTGTATCTATGACTCATTGTCCCTCGATAATGGAGAGAGCCAGACAAAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS TCA 72 bp | GGCGTTGAAACCTTTCTTCTGGATACTAAAGTCACTTaGAAAGGACACATGCATCTCATTCACGCTGGAGTT | + |
Preference number: 6 (lower is better) Translates to: GVETFLLDTKVT*KGHMHLIHAGV Trigger: AACTCCAGCGTGAATGAGATGCATGTGTCCTTTTCAAGTGACTTTAGTATCCAGAAGAAAGGTTTCAACGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS TCA 72 bp | GAACGTGAGGACTTTTGTGTTTCTTCCATCTATTTGTaGGGCACTCCTTGGAAGATCCATCAGAACTCCAAA | + |
Preference number: 6 (lower is better) Translates to: EREDFCVSSIYL*GTPWKIHQNSK Trigger: TTTGGAGTTCTGATGGATCTTCCAAGGAGTGCCTCACAAATAGATGGAAGAAACACAAAAGTCCTCACGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS GCA 72 bp | TTCTTCTGGATACTAAAGTCACTTGAAAAGGACACATaGATCTCATTCACGCTGGAGTTAAATGACAGGCCC | + |
Preference number: 6 (lower is better) Translates to: FFWILKSLEKDT*ISFTLELNDRP Trigger: GGGCCTGTCATTTAACTCCAGCGTGAATGAGATGCATGTGTCCTTTTCAAGTGACTTTAGTATCCAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | GAAGACAAAGATTTCCCCAGGTTATCGGAGCTCTTCTaGATGATATTGGTAGCTGTCTTACTCCAATCTGAG | + |
Preference number: 6 (lower is better) Translates to: EDKDFPRLSELF*MILVAVLLQSE Trigger: CTCAGATTGGAGTAAGACAGCTACCAATATCATCAAGAAGAGCTCCGATAACCTGGGGAAATCTTTGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | TTTTCTTCTTTGTTCACGATCCGTTTGACCTTTTCTACAATGCTGTaGATATTAGCCGAGGTGAGGTTCTGCCCATCACCAGTTTGGTTT | + |
Preference number: 6 (lower is better) Translates to: FSSLFTIRLTFSTML*ILAEVRFCPSPVWF Trigger: AAACCAAACTGGTGATGGGCAGAACCTCACCTCGGCTAATATCAACAGCATTGTAGAAAAGGTCAAACGGATCGTGAACAAAGAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | CACCAGTTTGGTTTAAAATCTCATTGGCCACTTCATTaGATTGTCTTGAACAGTTGGAAGTGTCAACAGGGC | + |
Preference number: 6 (lower is better) Translates to: HQFGLKSHWPLH*IVLNSWKCQQG Trigger: GCCCTGTTGACACTTCCAACTGTTCAAGACAATCAAATGAAGTGGCCAATGAGATTTTAAACCAAACTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | TTCTGTGTCTCAATGTTCACATGTGGGGTGCTATTCAGGTCTATTTaGAAGGCTAGCTCGTCAATTGTTTTTAAAGCTTCAGTAGAAGAC | + |
Preference number: 6 (lower is better) Translates to: FCVSMFTCGVLFRSI*KASSSIVFKASVED Trigger: GTCTTCTACTGAAGCTTTAAAAACAATTGACGAGCTAGCCTTCAAAATAGACCTGAATAGCACCCCACATGTGAACATTGAGACACAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS TCA 72 bp | TTGTTTTTGTTCATATCCCAGAAGGCACAGATAGGATaGTGCACTTCCTGTGTTCTGGTGTGTTTGATTTTG | + |
Preference number: 6 (lower is better) Translates to: LFLFISQKAQIG*CTSCVLVCLIL Trigger: CAAAATCAAACACACCAGAACACAGGAAGTGCATCATCCTATCTGTGCCTTCTGGGATATGAACAAAAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 72 bp | GTGATGTCAATGTTTTCTTCTTTGTTCACGATCCGTTaGACCTTTTCTACAATGCTGTTGATATTAGCCGAG | + |
Preference number: 6 (lower is better) Translates to: VMSMFSSLFTIR*TFSTMLLILAE Trigger: CTCGGCTAATATCAACAGCATTGTAGAAAAGGTCAAACGGATCGTGAACAAAGAAGAAAACATTGACATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS TCA 72 bp | CATAAACAGTGTAGTTCCAATTCTGAAAGGTTGAATTaGGCCATTCTGCTACTTTGGTCTGCACTTTTACTT | + |
Preference number: 6 (lower is better) Translates to: HKQCSSNSERLN*AILLLWSALLL Trigger: AAGTAAAAGTGCAGACCAAAGTAGCAGAATGGCTCAATTCAACCTTTCAGAATTGGAACTACACTGTTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS TCA 72 bp | TGCACTTCCTGTGTTCTGGTGTGTTTGATTTTGATTTaGACCGGATCTTTCAGATTCTGGATAGTAATGTTT | + |
Preference number: 6 (lower is better) Translates to: CTSCVLVCLILI*TGSFRFWIVMF Trigger: AAACATTACTATCCAGAATCTGAAAGATCCGGTTCAAATCAAAATCAAACACACCAGAACACAGGAAGTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041168.6 ENSMUST00000208429.3 ENSMUST00000238680.2 |
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CDS CAA 90 bp | ATTGTGAATCACAACAGATATTCGATACATTATTCCGTCATTCTTTaGTTTATGGACTCTGTTAGTAACGGGGATATTAGTGGTGACAGT | + |
Preference number: 6 (lower is better) Translates to: IVNHNRYSIHYSVIL*FMDSVSNGDISGDS Trigger: ACTGTCACCACTAATATCCCCGTTACTAACAGAGTCCATAAACAAAAGAATGACGGAATAATGTATCGAATATCTGTTGTGATTCACAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208429.3 |