Pregenerated sensors for ADGRF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041293Ensembl transcript IDs: ENSMUST00000047399.6
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTAACCAGTTTTATCCTTGGACTCCCAAGTCACAAAGTCTCACCTaGCTCTGTGCTTGTCTTCACTGCCTGCTGTGTGGCTCTGAATGG | + |
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Preference number: 1 (lower is better) Translates to: SNQFYPWTPKSQSLT*LCACLHCLLCGSEW Trigger: CCATTCAGAGCCACACAGCAGGCAGTGAAGACAAGCACAGAGTCAGGTGAGACTTTGTGACTTGGGAGTCCAAGGATAAAACTGGTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR GCA 90 bp | TTATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTaGATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCA | + |
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Preference number: 1 (lower is better) Translates to: LSSRHCMYMSPPRGI*ILLPYAVEFTTQTP Trigger: TGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR CAA 90 bp | TCCCTTGGAACAGGTGGTTGTGATCCCCCACGTGGGTGCTGGGAATaGAGTCCAGGTCCTCTGCAAAAGCAACAAGTGCTCTTAGCCGCT | + |
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Preference number: 2 (lower is better) Translates to: SLGTGGCDPPRGCWE*SPGPLQKQQVLLAA Trigger: AGCGGCTAAGAGCACTTGTTGCTTTTGCAGAGGACCTGGACTCAATTCCCAGCACCCACGTGGGGGATCACAACCACCTGTTCCAAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR CCA 90 bp | TGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAGTAGATCCCCCCCCACGTGGGTGCTaGGAATTGAGTCCAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: CTAYACCAHRSQKRAVDPPPRGC*ELSPGP Trigger: AGGACCTGGACTCAATTCCCAGCACCCACGTGGGGG...GGGATCTACTGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACA 54% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR GCA 90 bp | AATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTAGATCCCCCACGTGGGTaGTGGGAATTGAGTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: NLHTPSLCCGIHHSNSTLDPPRG*WELSPG Trigger: ACCTGGACTCAATTCCCAGCACCCACGTGGGGGATC...TAGGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR TCA 90 bp | TGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTCACCCCTGCTGTGTGGCTCTaGATGGCATGTTGCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: CIHSQATIIIKTLYVYVTPAVWL*MACCSK Trigger: CTTTGAGCAACATGCCATTCAGAGCCACACAGCAGG...GGTGACATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR GCA 90 bp | TATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCTCTCACCTGACTCTGTaGTTGTCTTCACTGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: YHQDTVCICHLPGEFAYSSHLTL*LSSLPA Trigger: AGCAGGCAGTGAAGACAAGCACAGAGTCAGGTGAGA...GGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR TCA 90 bp | TATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCTCACAAAGTCTCACCTaGCTCTGTGCTTGTCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: YHQDTVCICHLPGEFAYSSQSLT*LCACLH Trigger: GTGAAGACAAGCACAGAGTCAGGTGAGACTTTGTGA...GGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR GCA 90 bp | TGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTCACCTGTGCTTGTCTTCACTaGCTGCTGTGTGGCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: CIHSQATIIIKTLYVYVTCACLH*LLCGSE Trigger: TTCAGAGCCACACAGCAGGCAGTGAAGACAAGCACA...GGTGACATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR GCA 90 bp | TCACCTACTGGGTTTGTCAAAAAGATTAATTTCGTGTATGAATGTTTTGTCGGCCTTGTCTTCACTGCCTaGTGTGTGGCTCTGAATGGC | + |
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Preference number: 2 (lower is better) Translates to: SPTGFVKKINFVYECFVGLVFTA*CVALNG Trigger: GCCATTCAGAGCCACACAGCAGGCAGTGAAGACAAG...GCCGACAAAACATTCATACACGAAATTAATCTTTTTGACAAACCCAGTAGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR CCA 90 bp | GGAATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCAACCAGTTTTATCCTTaGACTCCCAAGTCACAAAGT | + |
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Preference number: 2 (lower is better) Translates to: GICILLPYAVEFTTQTPPNQFYP*TPKSQS Trigger: ACTTTGTGACTTGGGAGTCCAAGGATAAAACTGGTT...GGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR CAA 90 bp | CACCTACTGGGTTTGTCAAAAAGATTAATTTCGTGTATGAATGTTTaGTCGGCATGTACGTCTATGTACCGCATACGCATGTTGTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: HLLGLSKRLISCMNV*SACTSMYRIRMLCS Trigger: TGAGCACAACATGCGTATGCGGTACATAGACGTACATGCCGACAAAACATTCATACACGAAATTAATCTTTTTGACAAACCCAGTAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTCATCCTTCCTTATGCTGTaGAATTCACCACTCAAACTC | + |
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Preference number: 2 (lower is better) Translates to: SAYIAKPPLSSRHCMYMSSFLML*NSPLKL Trigger: GAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGA...TGACATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR CAA 90 bp | GAGGGCAGTAGATCCCTTGGAACAGGTGGTTGTGATCCCCCACGTGGGTGCTGGCACCTGACTCTGTGCTaGTCTTCACTGCCTGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: EGSRSLGTGGCDPPRGCWHLTLC*SSLPAV Trigger: CACAGCAGGCAGTGAAGACAAGCACAGAGTCAGGTG...CCAGCACCCACGTGGGGGATCACAACCACCTGTTCCAAGGGATCTACTGCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR TCA 72 bp | CAGGTGGTTGTGATCCCCCACGTGGGTGCTGGGAATTaGGTCCAGGTCCTCTGCAAAAGCAACAAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QVVVIPHVGAGN*VQVLCKSNKCS Trigger: AGAGCACTTGTTGCTTTTGCAGAGGACCTGGACTCAATTCCCAGCACCCACGTGGGGGATCACAACCACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR-3UTR CAA 90 bp | GTACGTCTATGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCACGTGGGTGCTGGGAATaGAGTCCAGGTCCTCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: VRLCTAYACCAHRSQKRARGCWE*SPGPLQ Trigger: TTGCAGAGGACCTGGACTCAATTCCCAGCACCCACG...TGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACATAGACGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR TCA 72 bp | TTTTATCCTTGGACTCCCAAGTCACAAAGTCTCACCTaGCTCTGTGCTTGTCTTCACTGCCTGCTGTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: FYPWTPKSQSLT*LCACLHCLLCG Trigger: GCCACACAGCAGGCAGTGAAGACAAGCACAGAGTCAGGTGAGACTTTGTGACTTGGGAGTCCAAGGATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR GCA 72 bp | AAAGTCTCACCTGACTCTGTGCTTGTCTTCACTGCCTaGTGTGTGGCTCTGAATGGCATGTTGCTCAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: KVSPDSVLVFTA*CVALNGMLLKE Trigger: TTCTTTGAGCAACATGCCATTCAGAGCCACACAGCAGGCAGTGAAGACAAGCACAGAGTCAGGTGAGACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR GCA 72 bp | AGACACTGTATGTATATGTCACCTCCCAGGGGAATTTaGATACTCCTTCCTTATGCTGTGGAATTCACCACT | + |
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Preference number: 3 (lower is better) Translates to: RHCMYMSPPRGI*ILLPYAVEFTT Trigger: AGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR CCA 72 bp | TTCAGGACAAATAGAATTATGCAGTGCTCTCTAGGGTaGGGTTTTAATTGTTTGGACAGATATTTTAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: FRTNRIMQCSLG*GFNCLDRYFSK Trigger: CTTACTAAAATATCTGTCCAAACAATTAAAACCCCACCCTAGAGAGCACTGCATAATTCTATTTGTCCTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | GAGGGCAGTAGATCCCTTGGAACAGGTGGTTGTGATCCCCCACGTGGGTGCTGGACGGGTCCAGTTGTGTaGAGGCAGCAGTTCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: EGSRSLGTGGCDPPRGCWTGPVV*RQQFWG Trigger: CCCCCAGAACTGCTGCCTTCACACAACTGGACCCGT...CCAGCACCCACGTGGGGGATCACAACCACCTGTTCCAAGGGATCTACTGCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | GAGGGCAGTAGATCCCTTGGAACAGGTGGTTGTGATCCCCCACGTGGGTGCTGGCACAGGACTCCCTGGTaGTCTGCCACCCAGAGGACT | + |
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Preference number: 4 (lower is better) Translates to: EGSRSLGTGGCDPPRGCWHRTPW*SATQRT Trigger: AGTCCTCTGGGTGGCAGATCACCAGGGAGTCCTGTG...CCAGCACCCACGTGGGGGATCACAACCACCTGTTCCAAGGGATCTACTGCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| 3UTR CAA 72 bp | ACAGGTGGTTGTGATCCCCCACGTGGGTGCTGGGAATaGAGTCCAGGTCCTCTGCAAAAGCAACAAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TGGCDPPRGCWE*SPGPLQKQQVL Trigger: GAGCACTTGTTGCTTTTGCAGAGGACCTGGACTCAATTCCCAGCACCCACGTGGGGGATCACAACCACCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGTAGATCCCTTGGAACAGGTGGTTGTGATCCCCCACGTGGGTGCTGGAGATTAGACTTGCAATaGAGATGCTCAGCCCTATGT | + |
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Preference number: 4 (lower is better) Translates to: EGSRSLGTGGCDPPRGCWRLDLQ*RCSALC Trigger: ACATAGGGCTGAGCATCTCCATTGCAAGTCTAATCT...CCAGCACCCACGTGGGGGATCACAACCACCTGTTCCAAGGGATCTACTGCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | AAGTCAGAAGAGGGCAGTAGATCCCTTGGAACAGGTGGTTGTGATCCCCCACGTGGACAAAGGGTGACATaGGCATGGAGAAAGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KSEEGSRSLGTGGCDPPRGQRVT*AWRKRS Trigger: TGACCTCTTTCTCCATGCTCATGTCACCCTTTGTCC...ACGTGGGGGATCACAACCACCTGTTCCAAGGGATCTACTGCCCTCTTCTGACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR GCA 90 bp | TGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAGTAGATCCCCGGCCATCATTTTTCTaGTGCAGGAAGCCATCGGTG | + |
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Preference number: 4 (lower is better) Translates to: CTAYACCAHRSQKRAVDPRPSFF*CRKPSV Trigger: CACCGATGGCTTCCTGCAGCAGAAAAATGATGGCCG...GGGATCTACTGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | CAACCTCAGAGTAACCAGTTTTATCCTTGGACTCCCAAGTCACAAAGTCTCACCTGCCACCCAGAGGACTaGCACCTGACCGTCATGCTT | + |
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Preference number: 4 (lower is better) Translates to: QPQSNQFYPWTPKSQSLTCHPED*HLTVML Trigger: AAGCATGACGGTCAGGTGCCAGTCCTCTGGGTGGCA...GGTGAGACTTTGTGACTTGGGAGTCCAAGGATAAAACTGGTTACTCTGAGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | AATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTACCGTCATGCTTCCTGTaGAGCCACTGCTGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NLHTPSLCCGIHHSNSTLPSCFL*SHCCRA Trigger: TGCCCTGCAGCAGTGGCTTCACAGGAAGCATGACGG...TAGGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR GCA 90 bp | TGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAGTAGATCCCTCACCAGGCAAATGTTaGGTGTGTAGGAGGTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: CTAYACCAHRSQKRAVDPSPGKC*VCRRFG Trigger: GCCAAACCTCCTACACACGCAACATTTGCCTGGTGA...GGGATCTACTGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | TACGTCTATGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAGTCTTTCCCATGCGGATaGCAGTGGCCTTGTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: YVYVPHTHVVLIEVRRGQSFPCG*QWPCHP Trigger: AGGATGACAAGGCCACTGCCATCCGCATGGGAAAGA...CTGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACATAGACGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | TGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAGTAGATCCCGTGGCCTTGTCATCCTaGTTCAGTCTTTCTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: CTAYACCAHRSQKRAVDPVALSS*FSLSPT Trigger: AGTTGGAGAAAGACTGAATCAGGATGACAAGGCCAC...GGGATCTACTGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | TTCAGGACAAATAGAATTATGCAGTGCTCTCTAGGGTGGGGTTTTAATTGTTTGTGCCAAAGCCCCAGGTaGGCCCTAGCAACGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: FRTNRIMQCSLGWGFNCLCQSPR*ALATGS Trigger: TGACCCCGTTGCTAGGGCTCACCTGGGGCTTTGGCA...CAAACAATTAAAACCCCACCCTAGAGAGCACTGCATAATTCTATTTGTCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | AATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTAGGCAAAGAGGAGTTCTaGAGGGCTAGTGGAGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: NLHTPSLCCGIHHSNSTLGKEEF*RASGAG Trigger: ACCGGCTCCACTAGCCCTCCAGAACTCCTCTTTGCC...TAGGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | CTGAGCCATCTCTCCAACCTCAGAGTAACCAGTTTTATCCTTGGACTCCCAAGTCTGGATTTGGGTCACTaGGGTCCCTTTCCAGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: LSHLSNLRVTSFILGLPSLDLGH*GPFPVN Trigger: ATTGACTGGAAAGGGACCCCAGTGACCCAAATCCAG...ACTTGGGAGTCCAAGGATAAAACTGGTTACTCTGAGGTTGGAGAGATGGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | GTACGTCTATGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAATATCACTGGGCCATTaGCCCATGCATTTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VRLCTAYACCAHRSQKRAISLGH*PMHFLS Trigger: AGAGAGGAAATGCATGGGTCAATGGCCCAGTGATAT...TGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACATAGACGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR GCA 90 bp | AGCCATCTCTCCAACCTCAGAGTAACCAGTTTTATCCTTGGACTCCCAAGTCACGTGGTCGATGGACTTTaGAAAAGGATGGTGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: SHLSNLRVTSFILGLPSHVVDGL*KRMVER Trigger: CCTTTCCACCATCCTTTTGCAAAGTCCATCGACCAC...GTGACTTGGGAGTCCAAGGATAAAACTGGTTACTCTGAGGTTGGAGAGATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | TGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAGTAGATCCCGAAAAGAGCCATATTTaGCTGGAAACTGCCTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: CTAYACCAHRSQKRAVDPEKSHI*LETASL Trigger: TAAGGAGGCAGTTTCCAGTCAAATATGGCTCTTTTC...GGGATCTACTGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | GGAATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCAACACACAGCGAGGCTaGGTCAGGTTTCCCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: GICILLPYAVEFTTQTPPNTQRG*VRFPFI Trigger: AATAAAGGGAAACCTGACTCAGCCTCGCTGTGTGTT...GGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | CTGAGCCATCTCTCCAACCTCAGAGTAACCAGTTTTATCCTTGGACTCCCAAGTTCAGCCCTATGTACGTaGTCCATTTTACCACAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LSHLSNLRVTSFILGLPSSALCT*SILPQE Trigger: TTCCTGTGGTAAAATGGATCACGTACATAGGGCTGA...ACTTGGGAGTCCAAGGATAAAACTGGTTACTCTGAGGTTGGAGAGATGGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | TGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTCACCGCCTCCAAAGCTTCCTaGGGACCAGCAACACCACAA | + |
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Preference number: 4 (lower is better) Translates to: CIHSQATIIIKTLYVYVTASKAS*GPATPQ Trigger: TTGTGGTGTTGCTGGTCCTCAGGAAGCTTTGGAGGC...GGTGACATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | AGCCATCTCTCCAACCTCAGAGTAACCAGTTTTATCCTTGGACTCCCAAGTCACGACGAATCTCCAGTATaGGAAAGTGCATACATGCCT | + |
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Preference number: 4 (lower is better) Translates to: SHLSNLRVTSFILGLPSHDESPV*ESAYMP Trigger: AGGCATGTATGCACTTTCTCATACTGGAGATTCGTC...GTGACTTGGGAGTCCAAGGATAAAACTGGTTACTCTGAGGTTGGAGAGATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR GCA 90 bp | GGAATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTGGGCCATTGACCCATaGATTTCCTCTCTGGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: GICILLPYAVEFTTQTPPWAIDP*ISSLGN Trigger: ATTACCCAGAGAGGAAATGCATGGGTCAATGGCCCA...GGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | TACGTCTATGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAGTTCTCTCTTCTCCTCTaGATCTCTGTATGTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: YVYVPHTHVVLIEVRRGQFSLLL*ISVCHL Trigger: CAGGTGACATACAGAGATCCAGAGGAGAAGAGAGAA...CTGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACATAGACGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | TGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAGTAGATCCCACTGACTCAAAACCATaGACTCTTCTGTACGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CTAYACCAHRSQKRAVDPTDSKP*TLLYAS Trigger: AGAAGCGTACAGAAGAGTCCATGGTTTTGAGTCAGT...GGGATCTACTGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | AAGTCAGAAGAGGGCAGTAGATCCCTTGGAACAGGTGGTTGTGATCCCCCACGTGCTGATAATAGTCTTTaGATGCGATTTCTGGAATTG | + |
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Preference number: 4 (lower is better) Translates to: KSEEGSRSLGTGGCDPPRADNSL*MRFLEL Trigger: CAATTCCAGAAATCGCATCCAAAGACTATTATCAGC...ACGTGGGGGATCACAACCACCTGTTCCAAGGGATCTACTGCCCTCTTCTGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | AATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTACCTTCCGAAATTGGGTaGCCCGAACTGACTCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: NLHTPSLCCGIHHSNSTLPSEIG*PELTQN Trigger: GTTTTGAGTCAGTTCGGGTCACCCAATTTCGGAAGG...TAGGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | TCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCTTTTCAGTTCTTCCAGCTaGGAAAGCACACAGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: SSRHCMYMSPPRGICILLFSSSS*ESTQDS Trigger: GGAGTCCTGTGTGCTTTCTCAGCTGGAAGAACTGAA...AAGGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | AATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTACTCTGTGATCTTGCCTaGGATCATCCTGAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLHTPSLCCGIHHSNSTLLCDLA*DHPELL Trigger: AAGGAGCTCAGGATGATCGCAGGCAAGATCACAGAG...TAGGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGTAACCAGTTTTATCCTTGGACTCCCAAGTCACAAAGTCTCACCTGACCCTGCATTGCTCCATTaGAACTGGCTAAAATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSFILGLPSHKVSPDPALLH*NWLKSQ Trigger: TTGGGATTTTAGCCAGTTGCAATGGAGCAATGCAGG...GTCAGGTGAGACTTTGTGACTTGGGAGTCCAAGGATAAAACTGGTTACTCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | TATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCGATAAGCCAGCAGGATaGCCAGAACGAGCATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YHQDTVCICHLPGEFAYSDKPAG*PERASK Trigger: TTTGGATGCTCGTTCTGGGCATCCTGCTGGCTTATC...GGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CCA 90 bp | GGAATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTTAGTAGCTGGGAGCTaGCATCCTTTGCATCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GICILLPYAVEFTTQTPPLVAGS*HPLHLV Trigger: TACAAGATGCAAAGGATGCCAGCTCCCAGCTACTAA...GGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CCA 90 bp | AATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTATCTTTCTCCAACTGCTaGCCTCCAAAGCTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLHTPSLCCGIHHSNSTLSFSNC*PPKLPE Trigger: CTCAGGAAGCTTTGGAGGCCAGCAGTTGGAGAAAGA...TAGGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | TGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTCACCGTTTTGCACCAAAGATaGCACACCCGCCTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CIHSQATIIIKTLYVYVTVLHQR*HTRLCD Trigger: ATCACAGAGGCGGGTGTGGCATCTTTGGTGCAAAAC...GGTGACATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | TTATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCAGTCTTTCTCCAACTaGTGGCCTCCAAAGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSRHCMYMSPPRGICILQSFSN*WPPKLP Trigger: AGGAAGCTTTGGAGGCCAGCAGTTGGAGAAAGACTG...GAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CCA 90 bp | AATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTACTCATACTCGTGGACTaGATGCCTTTCCTCAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLHTPSLCCGIHHSNSTLLILVD*MPFLNH Trigger: ATGGTTGAGGAAAGGCATCCAGTCCACGAGTATGAG...TAGGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CCA 90 bp | ATTAGTGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGCGTGTGCTCTGGATTTaGGTCACTGGGGTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISAYIAKPPLSSRHCMYMRVLWI*VTGVPF Trigger: GAAAGGGACCCCAGTGACCCAAATCCAGAGCACACG...CATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCACTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR TCA 90 bp | TCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCTTGCTGAATCCAGGATATaGTCAGCTATGTTGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: SSRHCMYMSPPRGICILLAESRI*SAMLMT Trigger: CGTCATCAACATAGCTGATCATATCCTGGATTCAGC...AAGGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | TTATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCAGAAATTAATGCTCTaGCTGAGGCCTCTGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSRHCMYMSPPRGICILQKLML*LRPLRE Trigger: CTCTCTCAGAGGCCTCAGGCAGAGCATTAATTTCTG...GAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR TCA 90 bp | TCACCTACTGGGTTTGTCAAAAAGATTAATTTCGTGTATGAATGTTTTGTCGGCAATGTTGCTCAGAAGTaGCACCACAGAGCCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPTGFVKKINFVYECFVGNVAQK*HHRAQV Trigger: AACCTGGGCTCTGTGGTGTCACTTCTGAGCAACATT...GCCGACAAAACATTCATACACGAAATTAATCTTTTTGACAAACCCAGTAGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGTAACCAGTTTTATCCTTGGACTCCCAAGTCACAAAGTCTCACCTGACAGTGCCCCAAACTTTTaGTCTCTCACAGAAATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRVTSFILGLPSHKVSPDSAPNF*SLTEIN Trigger: ATTAATTTCTGTGAGAGAGCAAAAGTTTGGGGCACT...GTCAGGTGAGACTTTGTGACTTGGGAGTCCAAGGATAAAACTGGTTACTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | AGTGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTCACGAATCCAAAGGAGATaGTGTTACACGGAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAYIAKPPLSSRHCMYMSRIQRR*CYTELS Trigger: GGAAAGCTCCGTGTAACAGCATCTCCTTTGGATTCG...TGACATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | TCACCTACTGGGTTTGTCAAAAAGATTAATTTCGTGTATGAATGTTTTGTCGGCAACCAGTTGGCAGCCTaGATTGCTCCATTGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPTGFVKKINFVYECFVGNQLAA*IAPLQL Trigger: CAGTTGCAATGGAGCAATGCAGGCTGCCAACTGGTT...GCCGACAAAACATTCATACACGAAATTAATCTTTTTGACAAACCCAGTAGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | AATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTAGCATACATGCCTCTGTaGTGTAGTATGTTGAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: NLHTPSLCCGIHHSNSTLAYMPL*CSMLNV Trigger: GACATTCAACATACTACAGCACAGAGGCATGTATGC...TAGGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | TATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCGAGAAAGTGCATACATaGCTCTGTGCTGTAGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: YHQDTVCICHLPGEFAYSEKVHT*LCAVVC Trigger: ACATACTACAGCACAGAGGCATGTATGCACTTTCTC...GGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CCA 90 bp | AATATGCAACATGTTTTGATTAGTGCATACATAGCCAAGCCACCATTATCATCACGGCCTCCTGTTCAATaGCAAAGAGGAGTTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NMQHVLISAYIAKPPLSSRPPVQ*QRGVLE Trigger: CTCCAGAACTCCTCTTTGCCATTGAACAGGAGGCCG...TGATGATAATGGTGGCTTGGCTATGTATGCACTAATCAAAACATGTTGCATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CCA 90 bp | ATTAGTGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTGCCAAGCCAGATTGTaGCTGTTCGCCATTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISAYIAKPPLSSRHCMYMCQARL*LFAIVP Trigger: AGGAACAATGGCGAACAGCCACAATCTGGCTTGGCA...CATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCACTAAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | TATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCCATCGATTTCAAAAGTaGCCCAAACTTTTGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YHQDTVCICHLPGEFAYSHRFQK*PKLLLS Trigger: AGAGAGCAAAAGTTTGGGGCACTTTTGAAATCGATG...GGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CCA 90 bp | ATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCTTTTGCAAAAGGATGGTaGAAAGGTTTTGCACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IIKTLYVYVTSQGNLHTPFAKGW*KGFAPK Trigger: CTTTGGTGCAAAACCTTTCCACCATCCTTTTGCAAA...AGGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | TGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTCACCGACTTTGCAAAAGGATaGTGGAAAGGTTTTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CIHSQATIIIKTLYVYVTDFAKG*WKGFAP Trigger: TGGTGCAAAACCTTTCCACCATCCTTTTGCAAAGTC...GGTGACATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | TGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTCACCTTGTCCAGTTCGTTATaGAGGCTGAATCCAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: CIHSQATIIIKTLYVYVTLSSSL*RLNPGY Trigger: ATATCCTGGATTCAGCCTCCATAACGAACTGGACAA...GGTGACATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | AATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTATCATCAGTGTCAGATTaGACACAGTTAAAGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLHTPSLCCGIHHSNSTLSSVSD*TQLKSL Trigger: CAAACTCTTTAACTGTGTCCAATCTGACACTGATGA...TAGGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | AGTGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTCATGCGATTTCTGGAATTaGTCTGGTTCAATAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: SAYIAKPPLSSRHCMYMSCDFWN*SGSINT Trigger: CGTGTTTATTGAACCAGATCAATTCCAGAAATCGCA...TGACATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR TCA 90 bp | AATATGCAACATGTTTTGATTAGTGCATACATAGCCAAGCCACCATTATCATCAGAAACTGGGTTAATGTaGTGTCACTGGACGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NMQHVLISAYIAKPPLSSETGLM*CHWTNL Trigger: GAGATTCGTCCAGTGACATCACATTAACCCAGTTTC...TGATGATAATGGTGGCTTGGCTATGTATGCACTAATCAAAACATGTTGCATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR GCA 90 bp | AATATGCAACATGTTTTGATTAGTGCATACATAGCCAAGCCACCATTATCATCAACAGGGATGAAATGTTaGTCAGAAGTGACACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NMQHVLISAYIAKPPLSSTGMKC*SEVTPQ Trigger: CTGTGGTGTCACTTCTGAGCAACATTTCATCCCTGT...TGATGATAATGGTGGCTTGGCTATGTATGCACTAATCAAAACATGTTGCATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | AATATGCAACATGTTTTGATTAGTGCATACATAGCCAAGCCACCATTATCATCAAATGTCTTTAGTAGCTaGGAGCTGGCATCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NMQHVLISAYIAKPPLSSNVFSS*ELASFA Trigger: TGCAAAGGATGCCAGCTCCCAGCTACTAAAGACATT...TGATGATAATGGTGGCTTGGCTATGTATGCACTAATCAAAACATGTTGCATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CCA 90 bp | AATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCTAAAGATGAAAAATCCCTaGAAAGCATTGAGTAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLHTPSLCCGIHHSNSTLKMKNP*KALSKA Trigger: TGCTTTACTCAATGCTTTCCAGGGATTTTTCATCTT...TAGGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| 3UTR CAA 72 bp | GGTTTGTCAAAAAGATTAATTTCGTGTATGAATGTTTaGTCGGCATGTACGTCTATGTACCGCATACGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GLSKRLISCMNV*SACTSMYRIRM Trigger: CATGCGTATGCGGTACATAGACGTACATGCCGACAAAACATTCATACACGAAATTAATCTTTTTGACAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS TCA 90 bp | CCAGATTGTGGCTGTTCGCCATTGTTCCTATGCCAAAGCCCCAGGTaGGCCCTAGCAACGGGGTCAGCACGAGGAGGCTCTTTCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: PDCGCSPLFLCQSPR*ALATGSARGGSFPC Trigger: GCATGGGAAAGAGCCTCCTCGTGCTGACCCCGTTGCTAGGGCTCACCTGGGGCTTTGGCATAGGAACAATGGCGAACAGCCACAATCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CCA 90 bp | GCCCTAGCAACGGGGTCAGCACGAGGAGGCTCTTTCCCATGCGGATaGCAGTGGCCTTGTCATCCTGATTCAGTCTTTCTCCAACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALATGSARGGSFPCG*QWPCHPDSVFLQLL Trigger: CAGCAGTTGGAGAAAGACTGAATCAGGATGACAAGGCCACTGCCATCCGCATGGGAAAGAGCCTCCTCGTGCTGACCCCGTTGCTAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS TCA 90 bp | ACGAGGAGGCTCTTTCCCATGCGGATGGCAGTGGCCTTGTCATCCTaGTTCAGTCTTTCTCCAACTGCTGGCCTCCAAAGCTTCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TRRLFPMRMAVALSS*FSLSPTAGLQSFLR Trigger: CCTCAGGAAGCTTTGGAGGCCAGCAGTTGGAGAAAGACTGAATCAGGATGACAAGGCCACTGCCATCCGCATGGGAAAGAGCCTCCTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 90 bp | CTCCTGTGCCTTTTCGGCCTCCTGTTCAATGGCAAAGAGGAGTTCTaGAGGGCTAGTGGAGCCGGTCACTTCGTAGCCAACAACGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLCLFGLLFNGKEEF*RASGAGHFVANNDA Trigger: AGCATCGTTGTTGGCTACGAAGTGACCGGCTCCACTAGCCCTCCAGAACTCCTCTTTGCCATTGAACAGGAGGCCGAAAAGGCACAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CAA 90 bp | GCAGTAGATCCCTTGGAACAGGTGGTTGTGATCCCCCACGTGGGTGCTGGGAATCTTGTTGGACAGAAGTaGCCGCAGCTTGGTATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVDPLEQVVVIPHVGAGNLVGQK*PQLGIQ Trigger: CTGGATACCAAGCTGCGGCAACTTCTGTCCAACAAG...ATTCCCAGCACCCACGTGGGGGATCACAACCACCTGTTCCAAGGGATCTACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS TCA 90 bp | ATCTTGCCTGCGATCATCCTGAGCTCCTTCTTCAGTTCTTCCAGCTaGGAAAGCACACAGGACTCCCTGGTGATCTGCCACCCAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ILPAIILSSFFSSSS*ESTQDSLVICHPED Trigger: GTCCTCTGGGTGGCAGATCACCAGGGAGTCCTGTGTGCTTTCTCAGCTGGAAGAACTGAAGAAGGAGCTCAGGATGATCGCAGGCAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 90 bp | GCGGATGGCAGTGGCCTTGTCATCCTGATTCAGTCTTTCTCCAACTaGTGGCCTCCAAAGCTTCCTGAGGACCAGCAACACCACAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: ADGSGLVILIQSFSN*WPPKLPEDQQHHNQ Trigger: TTGGTTGTGGTGTTGCTGGTCCTCAGGAAGCTTTGGAGGCCAGCAGTTGGAGAAAGACTGAATCAGGATGACAAGGCCACTGCCATCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 90 bp | AGTGACACCACAGAGCCCAGGTTCCCAACTGTGGTCGATGGACTTTaGAAAAGGATGGTGGAAAGGTTTTGCACCAAAGATGCCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: SDTTEPRFPTVVDGL*KRMVERFCTKDATP Trigger: GGGTGTGGCATCTTTGGTGCAAAACCTTTCCACCATCCTTTTGCAAAGTCCATCGACCACAGTTGGGAACCTGGGCTCTGTGGTGTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CCA 90 bp | GATGGCAGTGGCCTTGTCATCCTGATTCAGTCTTTCTCCAACTGCTaGCCTCCAAAGCTTCCTGAGGACCAGCAACACCACAACCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DGSGLVILIQSFSNC*PPKLPEDQQHHNQV Trigger: AACTTGGTTGTGGTGTTGCTGGTCCTCAGGAAGCTTTGGAGGCCAGCAGTTGGAGAAAGACTGAATCAGGATGACAAGGCCACTGCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 90 bp | GGAGCTTTCCCGAATACTCGAAAAGAGCCATATTTGACTGGAAACTaGCTCCTTAGGGCCTCCTGTGCCTTTTCGGCCTCCTGTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GAFPNTRKEPYLTGN*LLRASCAFSASCSM Trigger: CATTGAACAGGAGGCCGAAAAGGCACAGGAGGCCCTAAGGAGGCAGTTTCCAGTCAAATATGGCTCTTTTCGAGTATTCGGGAAAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 90 bp | AAGGTTTTGCACCAAAGATGCCACACCCGCCTCTGTGATCTTGCCTaGGATCATCCTGAGCTCCTTCTTCAGTTCTTCCAGCTGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KVLHQRCHTRLCDLA*DHPELLLQFFQLRK Trigger: CTTTCTCAGCTGGAAGAACTGAAGAAGGAGCTCAGGATGATCGCAGGCAAGATCACAGAGGCGGGTGTGGCATCTTTGGTGCAAAACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS TCA 90 bp | CGGTCACTTCGTAGCCAACAACGATGCTTCCCTTCCGAAATTGGGTaGCCCGAACTGACTCAAAACCATGGACTCTTCTGTACGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSLRSQQRCFPSEIG*PELTQNHGLFCTLL Trigger: AAGAAGCGTACAGAAGAGTCCATGGTTTTGAGTCAGTTCGGGTCACCCAATTTCGGAAGGGAAGCATCGTTGTTGGCTACGAAGTGACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS TCA 90 bp | GAAGAGGGGACAAAGGGTGACATGAGCATGGAGAAAGAGGTCAGGTaGCTACATCGGCACAGTACCGTGTCCAGAGTTTCATTAACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EEGTKGDMSMEKEVR*LHRHSTVSRVSLTS Trigger: ACTGGTTAATGAAACTCTGGACACGGTACTGTGCCGATGTAGTCACCTGACCTCTTTCTCCATGCTCATGTCACCCTTTGTCCCCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 90 bp | TCGGCACAGTACCGTGTCCAGAGTTTCATTAACCAGTTGGCAGCCTaGATTGCTCCATTGCAACTGGCTAAAATCCCAAAACACACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SAQYRVQSFINQLAA*IAPLQLAKIPKHTA Trigger: CGCTGTGTGTTTTGGGATTTTAGCCAGTTGCAATGGAGCAATGCAGGCTGCCAACTGGTTAATGAAACTCTGGACACGGTACTGTGCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CCA 90 bp | ATAAGTGTGGATATCACTGGGCCATTGACCCATGCATTTCCTCTCTaGGTAATGGGTAGAATGTCCCCAAAGGTCAATGAGGCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISVDITGPLTHAFPL*VMGRMSPKVNEAML Trigger: CAGCATGGCCTCATTGACCTTTGGGGACATTCTACCCATTACCCAGAGAGGAAATGCATGGGTCAATGGCCCAGTGATATCCACACTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CCA 90 bp | TGGAAAGCATTGAGTAAAGCAAAAAGAACATGCCAAGCCAGATTGTaGCTGTTCGCCATTGTTCCTATGCCAAAGCCCCAGGTGAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WKALSKAKRTCQARL*LFAIVPMPKPQVSP Trigger: AGGGCTCACCTGGGGCTTTGGCATAGGAACAATGGCGAACAGCCACAATCTGGCTTGGCATGTTCTTTTTGCTTTACTCAATGCTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 90 bp | CATCAGCAATTAAGAGTGACACGGCGATGTTCACCAGGCAAATGTTaGGTGTGTAGGAGGTTTGGCTTCTCTTGGTCTGCTTCCAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: HQQLRVTRRCSPGKC*VCRRFGFSWSASKT Trigger: TGTTTTGGAAGCAGACCAAGAGAAGCCAAACCTCCTACACACGCAACATTTGCCTGGTGAACATCGCCGTGTCACTCTTAATTGCTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CAA 90 bp | TGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAGTAGATCCCCGAAAAGAGCCATATTaGACTGGAAACTGCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CTAYACCAHRSQKRAVDPRKEPY*TGNCLL Trigger: AAGGAGGCAGTTTCCAGTCAAATATGGCTCTTTTCG...GGGATCTACTGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CAA 90 bp | TGCATACATAGCCAAGCCACCATTATCATCAAGACACTGTATGTATATGTCACCCCGTGTGCTCTGGATTaGGGTCACTGGGGTCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CIHSQATIIIKTLYVYVTPCALD*GHWGPF Trigger: AAAGGGACCCCAGTGACCCAAATCCAGAGCACACGG...GGTGACATATACATACAGTGTCTTGATGATAATGGTGGCTTGGCTATGTATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CAA 90 bp | TACGTCTATGTACCGCATACGCATGTTGTGCTCATAGAAGTCAGAAGAGGGCAGATAGCTATTGCTAGGTaGGGTGACAGCAAGGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YVYVPHTHVVLIEVRRGQIAIAR*GDSKGD Trigger: ATCACCCTTGCTGTCACCCAACCTAGCAATAGCTAT...CTGCCCTCTTCTGACTTCTATGAGCACAACATGCGTATGCGGTACATAGACGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 90 bp | TCTCTGTATGTCACCTGCAGTAGCACCTCATACTCGTGGACTGGATaGCTTTCCTCAACCATACTGACAATTTCTTTTGTTCTTCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLYVTCSSTSYSWTG*LSSTILTISFVLRP Trigger: TGGCCGAAGAACAAAAGAAATTGTCAGTATGGTTGAGGAAAGGCATCCAGTCCACGAGTATGAGGTGCTACTGCAGGTGACATACAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CAA 90 bp | CTGAGCCATCTCTCCAACCTCAGAGTAACCAGTTTTATCCTTGGACTCCCAAGTAGCATAAGATTAGACTaGCAATGGAGATGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSHLSNLRVTSFILGLPSSIRLD*QWRCSA Trigger: GGCTGAGCATCTCCATTGCAAGTCTAATCTTATGCT...ACTTGGGAGTCCAAGGATAAAACTGGTTACTCTGAGGTTGGAGAGATGGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CAA 90 bp | CAACCTCAGAGTAACCAGTTTTATCCTTGGACTCCCAAGTCACAAAGTCTCACCAATGTAGTCAACTTGTaGGACAGAAGTTGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QPQSNQFYPWTPKSQSLTNVVNL*DRSCRS Trigger: GCTGCGGCAACTTCTGTCCAACAAGTTGACTACATT...GGTGAGACTTTGTGACTTGGGAGTCCAAGGATAAAACTGGTTACTCTGAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CAA 90 bp | CTGAGCCATCTCTCCAACCTCAGAGTAACCAGTTTTATCCTTGGACTCCCAAGTCTTAATGTAGTCAACTaGTTGGACAGAAGTTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LSHLSNLRVTSFILGLPSLNVVN*LDRSCR Trigger: GCGGCAACTTCTGTCCAACAAGTTGACTACATTAAG...ACTTGGGAGTCCAAGGATAAAACTGGTTACTCTGAGGTTGGAGAGATGGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS TCA 90 bp | GTAGCCAACAACGATGCTTCCCTTCCGAAATTGGGTGACCCGAACTaGCTCAAAACCATGGACTCTTCTGTACGCTTCTTTAAGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: VANNDASLPKLGDPN*LKTMDSSVRFFKLI Trigger: AATCAACTTAAAGAAGCGTACAGAAGAGTCCATGGTTTTGAGTCAGTTCGGGTCACCCAATTTCGGAAGGGAAGCATCGTTGTTGGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS TCA 90 bp | AATGAGGCCATGCTGATAATAGTCTTTGGATGCGATTTCTGGAATTaGTCTGGTTCAATAAACACGTGGCCTCGGATAGGCAGAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NEAMLIIVFGCDFWN*SGSINTWPRIGREA Trigger: TGCCTCTCTGCCTATCCGAGGCCACGTGTTTATTGAACCAGATCAATTCCAGAAATCGCATCCAAAGACTATTATCAGCATGGCCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CCA 90 bp | TCCTCTGGATCTCTGTATGTCACCTGCAGTAGCACCTCATACTCGTaGACTGGATGCCTTTCCTCAACCATACTGACAATTTCTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSGSLYVTCSSTSYS*TGCLSSTILTISFV Trigger: AACAAAAGAAATTGTCAGTATGGTTGAGGAAAGGCATCCAGTCCACGAGTATGAGGTGCTACTGCAGGTGACATACAGAGATCCAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CCA 90 bp | GGCCATGCTGATAATAGTCTTTGGATGCGATTTCTGGAATTGATCTaGTTCAATAAACACGTGGCCTCGGATAGGCAGAGAGGCATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GHADNSLWMRFLELI*FNKHVASDRQRGIL Trigger: CAAAATGCCTCTCTGCCTATCCGAGGCCACGTGTTTATTGAACCAGATCAATTCCAGAAATCGCATCCAAAGACTATTATCAGCATGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 90 bp | AGGGCACAGTATATTCATCATTCTCAGACCCGAATCCAAAGGAGATaGTGTTACACGGAGCTTTCCCGAATACTCGAAAAGAGCCATATT | + |
|
Preference number: 5 (lower is better) Translates to: RAQYIHHSQTRIQRR*CYTELSRILEKSHI Trigger: AATATGGCTCTTTTCGAGTATTCGGGAAAGCTCCGTGTAACAGCATCTCCTTTGGATTCGGGTCTGAGAATGATGAATATACTGTGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CAA 90 bp | TTATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCGCCTGCATTGCTCCATaGCAACTGGCTAAAATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSRHCMYMSPPRGICILACIAP*QLAKIP Trigger: TGGGATTTTAGCCAGTTGCAATGGAGCAATGCAGGC...GAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CAA 90 bp | ATCATCAAGACACTGTATGTATATGTCACCTCCCAGGGGAATTTGCATACTCCTGAGGTTTGGCTTCTCTaGGTCTGCTTCCAAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: IIKTLYVYVTSQGNLHTPEVWLL*VCFQNR Trigger: TCTGTTTTGGAAGCAGACCAAGAGAAGCCAAACCTC...AGGAGTATGCAAATTCCCCTGGGAGGTGACATATACATACAGTGTCTTGATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CAA 90 bp | GGATTCAGGACAAATAGAATTATGCAGTGCTCTCTAGGGTGGGGTTTTAATTGTACATGCCAAGCCAGATaGTGGCTGTTCGCCATTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GFRTNRIMQCSLGWGFNCTCQAR*WLFAIV Trigger: AACAATGGCGAACAGCCACAATCTGGCTTGGCATGT...ACAATTAAAACCCCACCCTAGAGAGCACTGCATAATTCTATTTGTCCTGAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS-3UTR CAA 90 bp | GGAATTTGCATACTCCTTCCTTATGCTGTGGAATTCACCACTCAAACTCCACCCCTGTGCTGTAGTATGTaGAATGTCCTTAAGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GICILLPYAVEFTTQTPPLCCSM*NVLKHF Trigger: GAAATGCTTAAGGACATTCAACATACTACAGCACAG...GGGTGGAGTTTGAGTGGTGAATTCCACAGCATAAGGAAGGAGTATGCAAATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS TCA 90 bp | GATAGAAACTGGGTTAATGTGATGTCACTGGACGAATCTCCAGTATaGGAAAGTGCATACATGCCTCTGTGCTGTAGTATGTTGAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: DRNWVNVMSLDESPV*ESAYMPLCCSMLNV Trigger: GACATTCAACATACTACAGCACAGAGGCATGTATGCACTTTCTCATACTGGAGATTCGTCCAGTGACATCACATTAACCCAGTTTCTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CCA 90 bp | ATGGAAGGGATGAGACTACTGATGCTTTCCAATGTCTTTAGTAGCTaGGAGCTGGCATCCTTTGCATCTTGTAATAAAATTGTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: MEGMRLLMLSNVFSS*ELASFASCNKIVQF Trigger: GAACTGGACAATTTTATTACAAGATGCAAAGGATGCCAGCTCCCAGCTACTAAAGACATTGGAAAGCATCAGTAGTCTCATCCCTTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 90 bp | GTTTGCTTCCATGAACTTAATGTAGTCAACTTGTTGGACAGAAGTTaGCGCAGCTTGGTATCCAGGAGAATTCCAAAACAGAAGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VCFHELNVVNLLDRS*RSLVSRRIPKQKMK Trigger: TTTCATCTTCTGTTTTGGAATTCTCCTGGATACCAAGCTGCGGCAACTTCTGTCCAACAAGTTGACTACATTAAGTTCATGGAAGCAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS-3UTR CAA 90 bp | AATATGCAACATGTTTTGATTAGTGCATACATAGCCAAGCCACCATTATCATCAGATGGTGGAAAGGTTTaGCACCAAAGATGCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: NMQHVLISAYIAKPPLSSDGGKV*HQRCHT Trigger: GGTGTGGCATCTTTGGTGCAAAACCTTTCCACCATC...TGATGATAATGGTGGCTTGGCTATGTATGCACTAATCAAAACATGTTGCATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS TCA 72 bp | GGCTGTTCGCCATTGTTCCTATGCCAAAGCCCCAGGTaGGCCCTAGCAACGGGGTCAGCACGAGGAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GCSPLFLCQSPR*ALATGSARGGS Trigger: AGAGCCTCCTCGTGCTGACCCCGTTGCTAGGGCTCACCTGGGGCTTTGGCATAGGAACAATGGCGAACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | ACACAGGACTCCCTGGTGATCTGCCACCCAGAGGACTaGCACCTGACCGTCATGCTTCCTGTGAAGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: TQDSLVICHPED*HLTVMLPVKPL Trigger: CAGTGGCTTCACAGGAAGCATGACGGTCAGGTGCCAGTCCTCTGGGTGGCAGATCACCAGGGAGTCCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS GCA 72 bp | CTAGCAACGGGGTCAGCACGAGGAGGCTCTTTCCCATaGGGATGGCAGTGGCCTTGTCATCCTGATTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LATGSARGGSFP*GWQWPCHPDSV Trigger: GACTGAATCAGGATGACAAGGCCACTGCCATCCGCATGGGAAAGAGCCTCCTCGTGCTGACCCCGTTGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | GCTCTGCCTGAGGCCTCTGAGAGAGCAATTGCAGCTTaGGACGGGTCCAGTTGTGTGAAGGCAGCAGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALPEASERAIAA*DGSSCVKAAVL Trigger: CAGAACTGCTGCCTTCACACAACTGGACCCGTCCCAAGCTGCAATTGCTCTCTCAGAGGCCTCAGGCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | ACGGGGTCAGCACGAGGAGGCTCTTTCCCATGCGGATaGCAGTGGCCTTGTCATCCTGATTCAGTCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TGSARGGSFPCG*QWPCHPDSVFL Trigger: GAGAAAGACTGAATCAGGATGACAAGGCCACTGCCATCCGCATGGGAAAGAGCCTCCTCGTGCTGACCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | CTTTTCGGCCTCCTGTTCAATGGCAAAGAGGAGTTCTaGAGGGCTAGTGGAGCCGGTCACTTCGTAGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LFGLLFNGKEEF*RASGAGHFVAN Trigger: GTTGGCTACGAAGTGACCGGCTCCACTAGCCCTCCAGAACTCCTCTTTGCCATTGAACAGGAGGCCGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS GCA 72 bp | CACCAAAGATGCCACACCCGCCTCTGTGATCTTGCCTaGGATCATCCTGAGCTCCTTCTTCAGTTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HQRCHTRLCDLA*DHPELLLQFFQ Trigger: CTGGAAGAACTGAAGAAGGAGCTCAGGATGATCGCAGGCAAGATCACAGAGGCGGGTGTGGCATCTTTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | GGCCTTGTCATCCTGATTCAGTCTTTCTCCAACTGCTaGCCTCCAAAGCTTCCTGAGGACCAGCAACACCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLVILIQSFSNC*PPKLPEDQQHH Trigger: GTGGTGTTGCTGGTCCTCAGGAAGCTTTGGAGGCCAGCAGTTGGAGAAAGACTGAATCAGGATGACAAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | TCAGCACGAGGAGGCTCTTTCCCATGCGGATGGCAGTaGCCTTGTCATCCTGATTCAGTCTTTCTCCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: SARGGSFPCGWQ*PCHPDSVFLQL Trigger: CAGTTGGAGAAAGACTGAATCAGGATGACAAGGCCACTGCCATCCGCATGGGAAAGAGCCTCCTCGTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS GCA 72 bp | CCGAATACTCGAAAAGAGCCATATTTGACTGGAAACTaGCTCCTTAGGGCCTCCTGTGCCTTTTCGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PNTRKEPYLTGN*LLRASCAFSAS Trigger: GGAGGCCGAAAAGGCACAGGAGGCCCTAAGGAGGCAGTTTCCAGTCAAATATGGCTCTTTTCGAGTATTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS GCA 72 bp | AGTGGCCTTGTCATCCTGATTCAGTCTTTCTCCAACTaGTGGCCTCCAAAGCTTCCTGAGGACCAGCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: SGLVILIQSFSN*WPPKLPEDQQH Trigger: GTGTTGCTGGTCCTCAGGAAGCTTTGGAGGCCAGCAGTTGGAGAAAGACTGAATCAGGATGACAAGGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | CTTCTGCAGTATGTGGTGGCCTTCACTCTGATGATCTaGCTGGGACCACGTAAACTCGGCGACGGAGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLQYVVAFTLMI*LGPRKLGDGDF Trigger: GAAATCTCCGTCGCCGAGTTTACGTGGTCCCAGCAAGATCATCAGAGTGAAGGCCACCACATACTGCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | CACGGAGCTTTCCCGAATACTCGAAAAGAGCCATATTaGACTGGAAACTGCCTCCTTAGGGCCTCCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HGAFPNTRKEPY*TGNCLLRASCA Trigger: GGCACAGGAGGCCCTAAGGAGGCAGTTTCCAGTCAAATATGGCTCTTTTCGAGTATTCGGGAAAGCTCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 90 bp | CCCAACTGTGGTCGATGGACTTTGCAAAAGGATGGTGGAAAGGTTTaGCACCAAAGATGCCACACCCGCCTCTGTGATCTTGCCTGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: PNCGRWTLQKDGGKV*HQRCHTRLCDLACD Trigger: ATCGCAGGCAAGATCACAGAGGCGGGTGTGGCATCTTTGGTGCAAAACCTTTCCACCATCCTTTTGCAAAGTCCATCGACCACAGTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 90 bp | ATGCTGTTACACGGAGCTTTCCCGAATACTCGAAAAGAGCCATATTaGACTGGAAACTGCCTCCTTAGGGCCTCCTGTGCCTTTTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: MLLHGAFPNTRKEPY*TGNCLLRASCAFSA Trigger: GGCCGAAAAGGCACAGGAGGCCCTAAGGAGGCAGTTTCCAGTCAAATATGGCTCTTTTCGAGTATTCGGGAAAGCTCCGTGTAACAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | TCCCAACTGTGGTCGATGGACTTTGCAAAAGGATGGTaGAAAGGTTTTGCACCAAAGATGCCACACCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SQLWSMDFAKGW*KGFAPKMPHPP Trigger: AGGCGGGTGTGGCATCTTTGGTGCAAAACCTTTCCACCATCCTTTTGCAAAGTCCATCGACCACAGTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 90 bp | CGTGTCCAGAGTTTCATTAACCAGTTGGCAGCCTGCATTGCTCCATaGCAACTGGCTAAAATCCCAAAACACACAGCGAGGCTGAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVQSFINQLAACIAP*QLAKIPKHTARLSQ Trigger: CTGACTCAGCCTCGCTGTGTGTTTTGGGATTTTAGCCAGTTGCAATGGAGCAATGCAGGCTGCCAACTGGTTAATGAAACTCTGGACACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS TCA 72 bp | CGTAGCCAACAACGATGCTTCCCTTCCGAAATTGGGTaGCCCGAACTGACTCAAAACCATGGACTCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSQQRCFPSEIG*PELTQNHGLFC Trigger: ACAGAAGAGTCCATGGTTTTGAGTCAGTTCGGGTCACCCAATTTCGGAAGGGAAGCATCGTTGTTGGCTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS TCA 72 bp | ACAAAGGGTGACATGAGCATGGAGAAAGAGGTCAGGTaGCTACATCGGCACAGTACCGTGTCCAGAGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TKGDMSMEKEVR*LHRHSTVSRVS Trigger: TGAAACTCTGGACACGGTACTGTGCCGATGTAGTCACCTGACCTCTTTCTCCATGCTCATGTCACCCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS GCA 72 bp | AGTTCTCTCTTCTCCTCTGGATCTCTGTATGTCACCTaGAGTAGCACCTCATACTCGTGGACTGGATGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSLFSSGSLYVT*SSTSYSWTGCL Trigger: AAGGCATCCAGTCCACGAGTATGAGGTGCTACTGCAGGTGACATACAGAGATCCAGAGGAGAAGAGAGAACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 72 bp | TTGCAAAAGGATGGTGGAAAGGTTTTGCACCAAAGATaGCACACCCGCCTCTGTGATCTTGCCTGCGATCAT | + |
|
Preference number: 6 (lower is better) Translates to: LQKDGGKVLHQR*HTRLCDLACDH Trigger: ATGATCGCAGGCAAGATCACAGAGGCGGGTGTGGCATCTTTGGTGCAAAACCTTTCCACCATCCTTTTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 72 bp | GTCGATGGACTTTGCAAAAGGATGGTGGAAAGGTTTTaGACCAAAGATGCCACACCCGCCTCTGTGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VDGLCKRMVERF*TKDATPASVIL Trigger: CAAGATCACAGAGGCGGGTGTGGCATCTTTGGTGCAAAACCTTTCCACCATCCTTTTGCAAAGTCCATCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 72 bp | TTTGTCTCATTTCCATCTGATAGTTGTAGCCCCGTGTaGTCTGGATTTGGGTCACTGGGGTCCCTTTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: FVSFPSDSCSPV*SGFGSLGSLSS Trigger: ACTGGAAAGGGACCCCAGTGACCCAAATCCAGAGCACACGGGGCTACAACTATCAGATGGAAATGAGACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CCA 72 bp | CGGCACAGTACCGTGTCCAGAGTTTCATTAACCAGTTaGCAGCCTGCATTGCTCCATTGCAACTGGCTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: RHSTVSRVSLTS*QPALLHCNWLK Trigger: TTTTAGCCAGTTGCAATGGAGCAATGCAGGCTGCCAACTGGTTAATGAAACTCTGGACACGGTACTGTGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CAA 72 bp | AACGCGGGAACAACGAACGCCAAGAGAGGTTTGCTCTaGTCAGACCAGTTAAGCCAACACACATCGTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: NAGTTNAKRGLL*SDQLSQHTSFL Trigger: AAGGAACGATGTGTGTTGGCTTAACTGGTCTGACAAGAGCAAACCTCTCTTGGCGTTCGTTGTTCCCGCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CAA 72 bp | ATAGTCAACGCGGGAACAACGAACGCCAAGAGAGGTTaGCTCTTGTCAGACCAGTTAAGCCAACACACATCG | + |
|
Preference number: 6 (lower is better) Translates to: IVNAGTTNAKRG*LLSDQLSQHTS Trigger: CGATGTGTGTTGGCTTAACTGGTCTGACAAGAGCAAACCTCTCTTGGCGTTCGTTGTTCCCGCGTTGACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS GCA 72 bp | ACAGAGCCCAGGTTCCCAACTGTGGTCGATGGACTTTaGAAAAGGATGGTGGAAAGGTTTTGCACCAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TEPRFPTVVDGL*KRMVERFCTKD Trigger: ATCTTTGGTGCAAAACCTTTCCACCATCCTTTTGCAAAGTCCATCGACCACAGTTGGGAACCTGGGCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
||
| CDS CCA 72 bp | GATATCACTGGGCCATTGACCCATGCATTTCCTCTCTaGGTAATGGGTAGAATGTCCCCAAAGGTCAATGAG | + |
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Preference number: 6 (lower is better) Translates to: DITGPLTHAFPL*VMGRMSPKVNE Trigger: CTCATTGACCTTTGGGGACATTCTACCCATTACCCAGAGAGGAAATGCATGGGTCAATGGCCCAGTGATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | TTCCATCTGATAGTTGTAGCCCCGTGTGCTCTGGATTaGGGTCACTGGGGTCCCTTTCCAGTCAATGAATTT | + |
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Preference number: 6 (lower is better) Translates to: FHLIVVAPCALD*GHWGPFPVNEF Trigger: AAATTCATTGACTGGAAAGGGACCCCAGTGACCCAAATCCAGAGCACACGGGGCTACAACTATCAGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 90 bp | CCAGTTAAGCCAACACACATCGTTCCTTTTATAGCTATTGCTAGGTaGGGTGACAGCAAGGGTGATGATGGATATAAGGAGAGGGCACCC | + |
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Preference number: 6 (lower is better) Translates to: PVKPTHIVPFIAIAR*GDSKGDDGYKERAP Trigger: GGGTGCCCTCTCCTTATATCCATCATCACCCTTGCTGTCACCCAACCTAGCAATAGCTATAAAAGGAACGATGTGTGTTGGCTTAACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 90 bp | ACAGCCACAATAGTCAACGCGGGAACAACGAACGCCAAGAGAGGTTaGCTCTTGTCAGACCAGTTAAGCCAACACACATCGTTCCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: TATIVNAGTTNAKRG*LLSDQLSQHTSFLL Trigger: TAAAAGGAACGATGTGTGTTGGCTTAACTGGTCTGACAAGAGCAAACCTCTCTTGGCGTTCGTTGTTCCCGCGTTGACTATTGTGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS TCA 72 bp | AACGATGCTTCCCTTCCGAAATTGGGTGACCCGAACTaGCTCAAAACCATGGACTCTTCTGTACGCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: NDASLPKLGDPN*LKTMDSSVRFF Trigger: AAAGAAGCGTACAGAAGAGTCCATGGTTTTGAGTCAGTTCGGGTCACCCAATTTCGGAAGGGAAGCATCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | ATAGTTGTAGCCCCGTGTGCTCTGGATTTGGGTCACTaGGGTCCCTTTCCAGTCAATGAATTTTCCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: IVVAPCALDLGH*GPFPVNEFSRK Trigger: TTTTCTGGAAAATTCATTGACTGGAAAGGGACCCCAGTGACCCAAATCCAGAGCACACGGGGCTACAACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | TTGAGTAAAGCAAAAAGAACATGCCAAGCCAGATTGTaGCTGTTCGCCATTGTTCCTATGCCAAAGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LSKAKRTCQARL*LFAIVPMPKPQ Trigger: CTGGGGCTTTGGCATAGGAACAATGGCGAACAGCCACAATCTGGCTTGGCATGTTCTTTTTGCTTTACTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | AGTTTCATTAACCAGTTGGCAGCCTGCATTGCTCCATaGCAACTGGCTAAAATCCCAAAACACACAGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: SFINQLAACIAP*QLAKIPKHTAR Trigger: CCTCGCTGTGTGTTTTGGGATTTTAGCCAGTTGCAATGGAGCAATGCAGGCTGCCAACTGGTTAATGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | GCATTGAGTAAAGCAAAAAGAACATGCCAAGCCAGATaGTGGCTGTTCGCCATTGTTCCTATGCCAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: ALSKAKRTCQAR*WLFAIVPMPKP Trigger: GGGCTTTGGCATAGGAACAATGGCGAACAGCCACAATCTGGCTTGGCATGTTCTTTTTGCTTTACTCAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS GCA 72 bp | GTCACCTGCAGTAGCACCTCATACTCGTGGACTGGATaGCTTTCCTCAACCATACTGACAATTTCTTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: VTCSSTSYSWTG*LSSTILTISFV Trigger: AACAAAAGAAATTGTCAGTATGGTTGAGGAAAGGCATCCAGTCCACGAGTATGAGGTGCTACTGCAGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS GCA 72 bp | TACCGTGTCCAGAGTTTCATTAACCAGTTGGCAGCCTaGATTGCTCCATTGCAACTGGCTAAAATCCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: YRVQSFINQLAA*IAPLQLAKIPK Trigger: TTTTGGGATTTTAGCCAGTTGCAATGGAGCAATGCAGGCTGCCAACTGGTTAATGAAACTCTGGACACGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | CGTTCATCAGTGTCAGATTGGACACAGTTAAAGAGTTaGCCAGCGACAGGGATGAAATGTTGCTCAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: RSSVSDWTQLKS*PATGMKCCSEV Trigger: CACTTCTGAGCAACATTTCATCCCTGTCGCTGGCAAACTCTTTAACTGTGTCCAATCTGACACTGATGAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | GTGTCCAGAGTTTCATTAACCAGTTGGCAGCCTGCATaGCTCCATTGCAACTGGCTAAAATCCCAAAACACA | + |
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Preference number: 6 (lower is better) Translates to: VSRVSLTSWQPA*LHCNWLKSQNT Trigger: TGTGTTTTGGGATTTTAGCCAGTTGCAATGGAGCAATGCAGGCTGCCAACTGGTTAATGAAACTCTGGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 90 bp | GCGTTCCGTTTTGATGTTTGCTTCCATGAACTTAATGTAGTCAACTaGTTGGACAGAAGTTGCCGCAGCTTGGTATCCAGGAGAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: AFRFDVCFHELNVVN*LDRSCRSLVSRRIP Trigger: TGGAATTCTCCTGGATACCAAGCTGCGGCAACTTCTGTCCAACAAGTTGACTACATTAAGTTCATGGAAGCAAACATCAAAACGGAACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | CCAACACACATCGTTCCTTTTATAGCTATTGCTAGGTaGGGTGACAGCAAGGGTGATGATGGATATAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PTHIVPFIAIAR*GDSKGDDGYKE Trigger: CTCCTTATATCCATCATCACCCTTGCTGTCACCCAACCTAGCAATAGCTATAAAAGGAACGATGTGTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | GATGTTTGCTTCCATGAACTTAATGTAGTCAACTTGTaGGACAGAAGTTGCCGCAGCTTGGTATCCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: DVCFHELNVVNL*DRSCRSLVSRR Trigger: TCTCCTGGATACCAAGCTGCGGCAACTTCTGTCCAACAAGTTGACTACATTAAGTTCATGGAAGCAAACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS TCA 72 bp | ATGCTGATAATAGTCTTTGGATGCGATTTCTGGAATTaGTCTGGTTCAATAAACACGTGGCCTCGGATAGGC | + |
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Preference number: 6 (lower is better) Translates to: MLIIVFGCDFWN*SGSINTWPRIG Trigger: GCCTATCCGAGGCCACGTGTTTATTGAACCAGATCAATTCCAGAAATCGCATCCAAAGACTATTATCAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS GCA 72 bp | TATATTCATCATTCTCAGACCCGAATCCAAAGGAGATaGTGTTACACGGAGCTTTCCCGAATACTCGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: YIHHSQTRIQRR*CYTELSRILEK Trigger: CTTTTCGAGTATTCGGGAAAGCTCCGTGTAACAGCATCTCCTTTGGATTCGGGTCTGAGAATGATGAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS GCA 72 bp | CATGAACTTAATGTAGTCAACTTGTTGGACAGAAGTTaGCGCAGCTTGGTATCCAGGAGAATTCCAAAACAG | + |
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Preference number: 6 (lower is better) Translates to: HELNVVNLLDRS*RSLVSRRIPKQ Trigger: CTGTTTTGGAATTCTCCTGGATACCAAGCTGCGGCAACTTCTGTCCAACAAGTTGACTACATTAAGTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | GCTGATGGAATAGTTTTGAATAAGTGTGGATATCACTaGGCCATTGACCCATGCATTTCCTCTCTGGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: ADGIVLNKCGYH*AIDPCISSLGN Trigger: ATTACCCAGAGAGGAAATGCATGGGTCAATGGCCCAGTGATATCCACACTTATTCAAAACTATTCCATCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | CATGCTGATAATAGTCTTTGGATGCGATTTCTGGAATaGATCTGGTTCAATAAACACGTGGCCTCGGATAGG | + |
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Preference number: 6 (lower is better) Translates to: HADNSLWMRFLE*IWFNKHVASDR Trigger: CCTATCCGAGGCCACGTGTTTATTGAACCAGATCAATTCCAGAAATCGCATCCAAAGACTATTATCAGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 90 bp | CATGAACTTAATGTAGTCAACTTGTTGGACAGAAGTTGCCGCAGCTaGGTATCCAGGAGAATTCCAAAACAGAAGATGAAAAATCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HELNVVNLLDRSCRS*VSRRIPKQKMKNPW Trigger: CCAGGGATTTTTCATCTTCTGTTTTGGAATTCTCCTGGATACCAAGCTGCGGCAACTTCTGTCCAACAAGTTGACTACATTAAGTTCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | AATGTAGTCAACTTGTTGGACAGAAGTTGCCGCAGCTaGGTATCCAGGAGAATTCCAAAACAGAAGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: NVVNLLDRSCRS*VSRRIPKQKMK Trigger: TTTCATCTTCTGTTTTGGAATTCTCCTGGATACCAAGCTGCGGCAACTTCTGTCCAACAAGTTGACTACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 90 bp | TTCCGTTTTGATGTTTGCTTCCATGAACTTAATGTAGTCAACTTGTaGGACAGAAGTTGCCGCAGCTTGGTATCCAGGAGAATTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: FRFDVCFHELNVVNL*DRSCRSLVSRRIPK Trigger: TTTTGGAATTCTCCTGGATACCAAGCTGCGGCAACTTCTGTCCAACAAGTTGACTACATTAAGTTCATGGAAGCAAACATCAAAACGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | TTTCCAATGTCTTTAGTAGCTGGGAGCTGGCATCCTTaGCATCTTGTAATAAAATTGTCCAGTTCGTTATGG | + |
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Preference number: 6 (lower is better) Translates to: FPMSLVAGSWHP*HLVIKLSSSLW Trigger: CCATAACGAACTGGACAATTTTATTACAAGATGCAAAGGATGCCAGCTCCCAGCTACTAAAGACATTGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CAA 72 bp | GGAAAAGTTCAGGAAAATTTCGCTGATGGAATAGTTTaGAATAAGTGTGGATATCACTGGGCCATTGACCCA | + |
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Preference number: 6 (lower is better) Translates to: GKVQENFADGIV*NKCGYHWAIDP Trigger: TGGGTCAATGGCCCAGTGATATCCACACTTATTCAAAACTATTCCATCAGCGAAATTTTCCTGAACTTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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| CDS CCA 72 bp | ATGAGACTACTGATGCTTTCCAATGTCTTTAGTAGCTaGGAGCTGGCATCCTTTGCATCTTGTAATAAAATT | + |
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Preference number: 6 (lower is better) Translates to: MRLLMLSNVFSS*ELASFASCNKI Trigger: AATTTTATTACAAGATGCAAAGGATGCCAGCTCCCAGCTACTAAAGACATTGGAAAGCATCAGTAGTCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047399.6 |
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