RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRB3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033569

Ensembl transcript IDs: ENSMUST00000041838.7, ENSMUST00000126626.8, ENSMUST00000135518.8, ENSMUST00000146592.8, ENSMUST00000151309.8

Found 664 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTaGCCAGTGAGAAATTGCCATAAGAAAACACTGATGTTGGCACAA +
Preference number: 1 (lower is better)
Translates to: RGGENCTLGRLSPLA*PVRNCHKKTLMLAQ
Trigger: TTGTGCCAACATCAGTGTTTTCTTATGGCAATTTCTCACTGGTCAGGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR TCA 90 bp ATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTaGGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTGACCAGT +
Preference number: 1 (lower is better)
Translates to: ITLQIHSTGTYNTGW*ELYTWPSLSTSLTS
Trigger: ACTGGTCAGGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR TCA 90 bp AGAAATTGCCATAAGAAAACACTGATGTTGGCACAAGAAGGGTCCTaGCAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCC +
Preference number: 1 (lower is better)
Translates to: RNCHKKTLMLAQEGS*QRKVTLSRWKCQAS
Trigger: GGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCCAACATCAGTGTTTTCTTATGGCAATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR TCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCGCACAAGAAGGGTCCTaGCAGAGGAAAGTCACACTG +
Preference number: 2 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGAQEGS*QRKVTL
Trigger: CAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGC...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCAGTGTCAGTGTATTTaGCTGTGTCTCTACCTAAGT +
Preference number: 2 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAQCQCI*LCLYLS
Trigger: ACTTAGGTAGAGACACAGTCAAATACACTGACACTG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR TCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCTCTCTCCACTAGCCTaGCCAGTGAGAAATTGCCAT +
Preference number: 2 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGLSPLA*PVRNCH
Trigger: ATGGCAATTTCTCACTGGTCAGGCTAGTGGAGAGAG...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCAGTGTCAGTGTATTTaGCTGTGTCTCTACCTAAGT +
Preference number: 2 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSQCQCI*LCLYLS
Trigger: ACTTAGGTAGAGACACAGTCAAATACACTGACACTG...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR TCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCAGTGTCAGTGTATTTaGCTGTGTCTCTACCTAAGT +
Preference number: 2 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFQCQCI*LCLYLS
Trigger: ACTTAGGTAGAGACACAGTCAAATACACTGACACTG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCAGTGTCAGTGTATTTaGCTGTGTCTCTACCTAAGT +
Preference number: 2 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRQCQCI*LCLYLS
Trigger: ACTTAGGTAGAGACACAGTCAAATACACTGACACTG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGTCACACTGTCCAGGTaGAAATGTCAGGCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRVTLSR*KCQASQ
Trigger: TTGGGAAGCCTGACATTTCCACCTGGACAGTGTGAC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR TCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCTCTCTCCACTAGCCTaGCCAGTGAGAAATTGCCAT +
Preference number: 2 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVLSPLA*PVRNCH
Trigger: ATGGCAATTTCTCACTGGTCAGGCTAGTGGAGAGAG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGCCATAAGAAAACACTaGTGTTGGCACAAGAAGGGT +
Preference number: 2 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRAIRKH*CWHKKG
Trigger: ACCCTTCTTGTGCCAACATCAGTGTTTTCTTATGGC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR TCA 72 bp CAAATCCATTCCACGGGTACTTACAACACGGGGTGGTaGGAACTGTACACTTGGCCGTCTCTCTCCACTAGC +
Preference number: 3 (lower is better)
Translates to: QIHSTGTYNTGW*ELYTWPSLSTS
Trigger: GCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR CAA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGTCAGTGTCAGTGTATTaGACTGTGTCTCTACCTAAG +
Preference number: 3 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRSVSVY*TVSLPK
Trigger: CTTAGGTAGAGACACAGTCAAATACACTGACACTGA...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR CAA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTCAGTGTCAGTGTATTaGACTGTGTCTCTACCTAAG +
Preference number: 3 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFSVSVY*TVSLPK
Trigger: CTTAGGTAGAGACACAGTCAAATACACTGACACTGA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR TCA 72 bp GAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTaGCCAGTGAGAAATTGCCATAAGAAAACACTGATG +
Preference number: 3 (lower is better)
Translates to: ENCTLGRLSPLA*PVRNCHKKTLM
Trigger: CATCAGTGTTTTCTTATGGCAATTTCTCACTGGTCAGGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGATCAGTGTCAGTGTATTaGACTGTGTCTCTACCTAAG +
Preference number: 3 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRSVSVY*TVSLPK
Trigger: CTTAGGTAGAGACACAGTCAAATACACTGACACTGA...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
3UTR-3UTR CAA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACTCAGTGTCAGTGTATTaGACTGTGTCTCTACCTAAG +
Preference number: 3 (lower is better)
Translates to: YFIHSCSRESYSEPSRENSVSVY*TVSLPK
Trigger: CTTAGGTAGAGACACAGTCAAATACACTGACACTGA...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGGCCTCGGCCACATGTaGAGGAGCATAAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAGLGHM*RSISSK
Trigger: CTTGGAGCTTATGCTCCTTCACATGTGGCCGAGGCC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACGGCCTTCCTCCATACTaGGGAGGTGTGCATGACCTG +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHGLPPY*GGVHDL
Trigger: CAGGTCATGCACACCTCCTCAGTATGGAGGAAGGCC...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACCCCCACTCTCCCAAGTaGTGGGGGCACGTGCATTTT +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHPHSPK*WGHVHF
Trigger: AAAATGCACGTGCCCCCAGCACTTGGGAGAGTGGGG...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGCCTCCATGAGCAGCTaGTGTGCACTGCCGACTCCT +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKASMSS*CALPTP
Trigger: AGGAGTCGGCAGTGCACAGCAGCTGCTCATGGAGGC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGAGCATGCGCTCCACTaGGACCACTCTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAEHALH*DHSSTP
Trigger: TGGTGTGGAAGAGTGGTCCCAGTGGAGCGCATGCTC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACGAGCATGCGCTCCACTaGGACCACTCTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHEHALH*DHSSTP
Trigger: TGGTGTGGAAGAGTGGTCCCAGTGGAGCGCATGCTC...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACCGCACCTGCGACCCTTaGCCACAAGTAACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHRTCDP*PQVTEH
Trigger: ATGCTCAGTTACTTGTGGTCAAGGGTCGCAGGTGCG...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCGCACCTGCGACCCTTaGCCACAAGTAACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLARTCDP*PQVTEH
Trigger: ATGCTCAGTTACTTGTGGTCAAGGGTCGCAGGTGCG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCACTCAGAGCCTCCATaGGCAGCTGCTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSHSEPP*AAAVHC
Trigger: GCAGTGCACAGCAGCTGCTCATGGAGGCTCTGAGTG...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCACTCAGAGCCTCCATaGGCAGCTGCTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSHSEPP*AAAVHC
Trigger: GCAGTGCACAGCAGCTGCTCATGGAGGCTCTGAGTG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCACTCAGAGCCTCCATaGGCAGCTGCTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLHSEPP*AAAVHC
Trigger: GCAGTGCACAGCAGCTGCTCATGGAGGCTCTGAGTG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCTCTTAATGGGCCGCTaGAGTGTGTCCCGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLALLMGR*SVSRKV
Trigger: CACCTTACGGGACACACTGCAGCGGCCCATTAAGAG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCGCCTCCATGAGCAGCTaGTGTGCACTGCCGACTCCT +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFASMSS*CALPTP
Trigger: AGGAGTCGGCAGTGCACAGCAGCTGCTCATGGAGGC...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTGCCTCCATGAGCAGCTaGTGTGCACTGCCGACTCCT +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSASMSS*CALPTP
Trigger: AGGAGTCGGCAGTGCACAGCAGCTGCTCATGGAGGC...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGAATGCCAGGTCGCCTaGAGGAGTCCTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAECQVA*RSPFPH
Trigger: GTGTGGAAAAGGACTCCTGCAGGCGACCTGGCATTC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCCTGCTTTCAGCCCATaGTCCTCGGCACTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRPAFSP*SSALRA
Trigger: GGCTCTGAGTGCCGAGGACCATGGGCTGAAAGCAGG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCACCTGCTTTCAGCCCATaGTCCTCGGCACTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSPAFSP*SSALRA
Trigger: GGCTCTGAGTGCCGAGGACCATGGGCTGAAAGCAGG...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCGGCCTCGGCCACATGTaGAGGAGCATAAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVGLGHM*RSISSK
Trigger: CTTGGAGCTTATGCTCCTTCACATGTGGCCGAGGCC...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCTGAGGAGGTGTGCATaGCCTGGTTCGTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLALRRCA*PGSCSL
Trigger: CAAAGAACACGAACCAGGTCATGCACACCTCCTCAG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGGGCCTTCCTCCATACTaGGGAGGTGTGCATGACCTG +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRGLPPY*GGVHDL
Trigger: CAGGTCATGCACACCTCCTCAGTATGGAGGAAGGCC...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCGGCCTTCCTCCATACTaGGGAGGTGTGCATGACCTG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVGLPPY*GGVHDL
Trigger: CAGGTCATGCACACCTCCTCAGTATGGAGGAAGGCC...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTCAGTGGACATTGATTaGATGCCAGGTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHSVDID*MPGRLQ
Trigger: CTGCAGGCGACCTGGCATTCAATCAATGTCCACTGA...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCCCACTCTCCCAAGTaGTGGGGGCACGTGCATTTT +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFPHSPK*WGHVHF
Trigger: AAAATGCACGTGCCCCCAGCACTTGGGAGAGTGGGG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCTGTCCTGTTACAGCTaGGCCCTGACAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLALSCYS*ALTSPH
Trigger: ATGAGGACTTGTCAGGGCGCAGCTGTAACAGGACAG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACACAGCCATATACGACTaGCACGCCTCTGTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHTAIYD*HASVKT
Trigger: GGTCTTGACAGAGGCGTGGCAGTCGTATATGGCTGT...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGCAGGACAACAGCCGCTaGAGGTCCAACGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKQDNSR*RSNEGI
Trigger: TATGCCTTCGTTGGACCTGCAGCGGCTGTTGTCCTG...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGCACTCTCCCAAGTGCTaGGGGCACGTGCATTTTGTG +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKHSPKC*GHVHFV
Trigger: CACAAAATGCACGTGCCCCCAGCACTTGGGAGAGTG...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGAGCATGCGCTCCACTaGGACCACTCTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSEHALH*DHSSTP
Trigger: TGGTGTGGAAGAGTGGTCCCAGTGGAGCGCATGCTC...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTGAGCATGCGCTCCACTaGGACCACTCTTCCACACCA +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSEHALH*DHSSTP
Trigger: TGGTGTGGAAGAGTGGTCCCAGTGGAGCGCATGCTC...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGAGGTGTGCATGACCTaGTTCGTGTTCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAEVCMT*FVFFGL
Trigger: GAGGCCAAAGAACACGAACCAGGTCATGCACACCTC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACGAGGTGTGCATGACCTaGTTCGTGTTCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHEVCMT*FVFFGL
Trigger: GAGGCCAAAGAACACGAACCAGGTCATGCACACCTC...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCCTGCTTTCAGCCCATaGTCCTCGGCACTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGPAFSP*SSALRA
Trigger: GGCTCTGAGTGCCGAGGACCATGGGCTGAAAGCAGG...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCAGTGTCTTGGTGACCTaGGACATTCCATCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLASVLVT*DIPSPA
Trigger: GGCAGGTGATGGAATGTCCCAGGTCACCAAGACACT...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCTCCAAAGAGAGGCCATaGCGTTACTGGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVSKERP*RYWRWW
Trigger: CCACCACCGCCAGTAACGCCATGGCCTCTCTTTGGA...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTCCAAAGAGAGGCCATaGCGTTACTGGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLSKERP*RYWRWW
Trigger: CCACCACCGCCAGTAACGCCATGGCCTCTCTTTGGA...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTCCAAAGAGAGGCCATaGCGTTACTGGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFSKERP*RYWRWW
Trigger: CCACCACCGCCAGTAACGCCATGGCCTCTCTTTGGA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTCCAAAGAGAGGCCATaGCGTTACTGGCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSSKERP*RYWRWW
Trigger: CCACCACCGCCAGTAACGCCATGGCCTCTCTTTGGA...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTAGAGTGTTCCTGTTATaGTTGCTGCGCGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSRVFLL*LLRGRG
Trigger: GCCCCTGCCGCGCAGCAACCATAACAGGAACACTCT...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTAGAGTGTTCCTGTTATaGTTGCTGCGCGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSRVFLL*LLRGRG
Trigger: GCCCCTGCCGCGCAGCAACCATAACAGGAACACTCT...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCAGAGTGTTCCTGTTATaGTTGCTGCGCGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFRVFLL*LLRGRG
Trigger: GCCCCTGCCGCGCAGCAACCATAACAGGAACACTCT...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGCATCAGCTTGTTCCTaGGGGACCCTTTTCTCATGG +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKASACS*GTLFSW
Trigger: CCATGAGAAAAGGGTCCCTCAGGAACAAGCTGATGC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACGTGTGTCCCGTAAGGTaGTACACAAGTTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHVCPVR*YTSSGS
Trigger: CGAACCAGAACTTGTGTATCACCTTACGGGACACAC...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTCACTCAGAGCCTCCATaGGCAGCTGCTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFHSEPP*AAAVHC
Trigger: GCAGTGCACAGCAGCTGCTCATGGAGGCTCTGAGTG...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCCAATAGTGTCTTGGTaGCCTGGGACATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAPIVSW*PGTFHH
Trigger: GTGATGGAATGTCCCAGGTCACCAAGACACTATTGG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGTGCCAATCACCATGTTaGCCAGGACAACAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRCQSPC*PGQQPL
Trigger: CAGCGGCTGTTGTCCTGGTCAACATGGTGATTGGCA...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTGCCAATCACCATGTTaGCCAGGACAACAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSCQSPC*PGQQPL
Trigger: CAGCGGCTGTTGTCCTGGTCAACATGGTGATTGGCA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTGCCAATCACCATGTTaGCCAGGACAACAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLCQSPC*PGQQPL
Trigger: CAGCGGCTGTTGTCCTGGTCAACATGGTGATTGGCA...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGACTGGCGGTGGTGGCTaGCAAAGCTGTTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKTGGGG*QSCCRN
Trigger: GTTTCTACAACAGCTTTGTCAGCCACCACCGCCAGT...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGCTCTCCTCTTTCATTaGTGGCTGGGTGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAALLFH*WLGAYR
Trigger: TCTGTAAGCACCCAGCCATCAATGAAAGAGGAGAGC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCCCCACTCTCCCAAGTaGTGGGGGCACGTGCATTTT +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGPHSPK*WGHVHF
Trigger: AAAATGCACGTGCCCCCAGCACTTGGGAGAGTGGGG...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTAGGCAACCCTCCGTCTaGTCATTCAGGGGTAACACG +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSRQPSV*SFRGNT
Trigger: CGTGTTACCCCTGAATGAGCAGACGGAGGGTTGCCT...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCGAATGCCAGGTCGCCTaGAGGAGTCCTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVECQVA*RSPFPH
Trigger: GTGTGGAAAAGGACTCCTGCAGGCGACCTGGCATTC...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCAGGGAGCTTCTGAATaGTCGCCACTACATTTCCAG +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAQGASE*SPLHFQ
Trigger: CTGGAAATGTAGTGGCGAGCATTCAGAAGCTCCCTG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCAGGACAACAGCCGCTaGAGGTCCAACGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRQDNSR*RSNEGI
Trigger: TATGCCTTCGTTGGACCTGCAGCGGCTGTTGTCCTG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCAGGACAACAGCCGCTaGAGGTCCAACGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFQDNSR*RSNEGI
Trigger: TATGCCTTCGTTGGACCTGCAGCGGCTGTTGTCCTG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCACAGGACAACAGCCGCTaGAGGTCCAACGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSQDNSR*RSNEGI
Trigger: TATGCCTTCGTTGGACCTGCAGCGGCTGTTGTCCTG...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTGTCATGGCCAGAACTaGAGACATCCATGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHCHGQN*RHPCQS
Trigger: GCTCTGACATGGATGTCTGCAGTTCTGGCCATGACA...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCCACTCTCCCAAGTGCTaGGGGCACGTGCATTTTGTG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVHSPKC*GHVHFV
Trigger: CACAAAATGCACGTGCCCCCAGCACTTGGGAGAGTG...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCACTCTCCCAAGTGCTaGGGGCACGTGCATTTTGTG +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRHSPKC*GHVHFV
Trigger: CACAAAATGCACGTGCCCCCAGCACTTGGGAGAGTG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGTCTCTTGGCCTCCCTaGTCAGATTGCAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKVSWPP*SDCRLE
Trigger: CTCAAGTCTGCAATCTGACCAGGGAGGCCAAGAGAC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTTTGGGTGGTCTCTTaGCCTCCCTGGTCAGATTGC +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSLWVVS*PPWSDC
Trigger: GCAATCTGACCAGGGAGGCCAAGAGACCACCCAAAG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCTTTGGGTGGTCTCTTaGCCTCCCTGGTCAGATTGC +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFLWVVS*PPWSDC
Trigger: GCAATCTGACCAGGGAGGCCAAGAGACCACCCAAAG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACGTGATACACAAGTTCTaGTTCGCACCTGCGACCCTT +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHVIHKF*FAPATL
Trigger: AAGGGTCGCAGGTGCGAACCAGAACTTGTGTATCAC...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCATGGCGTTACTGGCGGTaGTGGCTGACAAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSWRYWR*WLTKLL
Trigger: CAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCA...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTGGCGTTACTGGCGGTaGTGGCTGACAAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSWRYWR*WLTKLL
Trigger: CAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTAGAGTGTTCCTGTTATaGTTGCTGCGCGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSRVFLL*LLRGRG
Trigger: GCCCCTGCCGCGCAGCAACCATAACAGGAACACTCT...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCAGAGTGTTCCTGTTATaGTTGCTGCGCGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGRVFLL*LLRGRG
Trigger: GCCCCTGCCGCGCAGCAACCATAACAGGAACACTCT...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTGCATCAGCTTGTTCCTaGGGGACCCTTTTCTCATGG +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSASACS*GTLFSW
Trigger: CCATGAGAAAAGGGTCCCTCAGGAACAAGCTGATGC...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTTGACCACAAGTAACTaGGCATGCGCTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLLTTSN*ACAPLG
Trigger: TCCCAGTGGAGCGCATGCTCAGTTACTTGTGGTCAA...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGCACCTGCGACCCTTaGCCACAAGTAACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGRTCDP*PQVTEH
Trigger: ATGCTCAGTTACTTGTGGTCAAGGGTCGCAGGTGCG...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTGGCCTCGGCCACATGTaGAGGAGCATAAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFGLGHM*RSISSK
Trigger: CTTGGAGCTTATGCTCCTTCACATGTGGCCGAGGCC...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTGAGGAGGTGTGCATaGCCTGGTTCGTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRLRRCA*PGSCSL
Trigger: CAAAGAACACGAACCAGGTCATGCACACCTCCTCAG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTCAGTGGACATTGATTaGATGCCAGGTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLSVDID*MPGRLQ
Trigger: CTGCAGGCGACCTGGCATTCAATCAATGTCCACTGA...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGCATTCAGTGGACATTaGTTGAATGCCAGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKAFSGH*LNARSP
Trigger: AGGCGACCTGGCATTCAATCAATGTCCACTGAATGC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTGCAGCAGGGAGCTTCTaGATGCTCGCCACTACATTT +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSAAGSF*MLATTF
Trigger: AAATGTAGTGGCGAGCATTCAGAAGCTCCCTGCTGC...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCACACTTGGCACATTTaGGCGTCAGACCGCTATGAG +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSHTWHI*ASDRYE
Trigger: CTCATAGCGGTCTGACGCTCAAATGTGCCAAGTGTG...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTACTGGCGGTGGTGGCTaGCAAAGCTGTTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSTGGGG*QSCCRN
Trigger: GTTTCTACAACAGCTTTGTCAGCCACCACCGCCAGT...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGACTGGCGGTGGTGGCTaGCAAAGCTGTTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRTGGGG*QSCCRN
Trigger: GTTTCTACAACAGCTTTGTCAGCCACCACCGCCAGT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACAGGCCTGTGGGCTGTTaGATGATGACTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHRPVGC*MMTLEM
Trigger: CATTTCCAAAGTCATCATTCAACAGCCCACAGGCCT...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCAGGCCTGTGGGCTGTTaGATGATGACTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLARPVGC*MMTLEM
Trigger: CATTTCCAAAGTCATCATTCAACAGCCCACAGGCCT...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGCCAACTCAGAGGCCATaGAATTCTTCACAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKPTQRP*NSSQLC
Trigger: GCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGG...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTAGGCAACCCTCCGTCTaGTCATTCAGGGGTAACACG +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSRQPSV*SFRGNT
Trigger: CGTGTTACCCCTGAATGAGCAGACGGAGGGTTGCCT...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCTCTTAATGGGCCGCTaGAGTGTGTCCCGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGLLMGR*SVSRKV
Trigger: CACCTTACGGGACACACTGCAGCGGCCCATTAAGAG...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTCTCTTAATGGGCCGCTaGAGTGTGTCCCGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSLLMGR*SVSRKV
Trigger: CACCTTACGGGACACACTGCAGCGGCCCATTAAGAG...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGCATACTGAGGAGGTGTaGATGACCTGGTTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKHTEEV*MTWFVF
Trigger: GAACACGAACCAGGTCATGCACACCTCCTCAGTATG...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCTGTCCTGTTACAGCTaGGCCCTGACAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLLSCYS*ALTSPH
Trigger: ATGAGGACTTGTCAGGGCGCAGCTGTAACAGGACAG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTGTCCTGTTACAGCTaGGCCCTGACAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSLSCYS*ALTSPH
Trigger: ATGAGGACTTGTCAGGGCGCAGCTGTAACAGGACAG...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGGTACCTCTTCACCTGTaGCTTCACACTGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRVPLHL*LHTAVL
Trigger: CAGGACAGCAGTGTGAAGGCACAGGTGAAGAGGTAC...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGAATGCCAGGTCGCCTaGAGGAGTCCTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSECQVA*RSPFPH
Trigger: GTGTGGAAAAGGACTCCTGCAGGCGACCTGGCATTC...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTGGACATTGATTGAATaGCAGGTCGCCTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKWTLIE*QVACRS
Trigger: ACTCCTGCAGGCGACCTGGCATTCAATCAATGTCCA...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTGGTGGTCGTGCAGATaGTCTTATTGTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAWWSCR*SYCVSE
Trigger: CTCAGACACACAATAAGAGCATCTGCACGACCACCA...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCACAGCCATATACGACTaGCACGCCTCTGTCAAGACC +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFTAIYD*HASVKT
Trigger: GGTCTTGACAGAGGCGTGGCAGTCGTATATGGCTGT...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCACAGCCATATACGACTaGCACGCCTCTGTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLTAIYD*HASVKT
Trigger: GGTCTTGACAGAGGCGTGGCAGTCGTATATGGCTGT...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGACAGCCATATACGACTaGCACGCCTCTGTCAAGACC +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRTAIYD*HASVKT
Trigger: GGTCTTGACAGAGGCGTGGCAGTCGTATATGGCTGT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCACATGGCAACCAAACTaGCTCGGGCTCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVTWQPN*LGLTLF
Trigger: GAACAAGGTGAGCCCGAGCCAGTTTGGTTGCCATGT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTACATGGCAACCAAACTaGCTCGGGCTCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSTWQPN*LGLTLF
Trigger: GAACAAGGTGAGCCCGAGCCAGTTTGGTTGCCATGT...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCAACAGAACCAGGGACTaGTCATCTATTCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLANRTRD*SSIPHS
Trigger: AGAGTGGGGAATAGATGACCAGTCCCTGGTTCTGTT...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCGTCTCTTGGCCTCCCTaGTCAGATTGCAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLVSWPP*SDCRLE
Trigger: CTCAAGTCTGCAATCTGACCAGGGAGGCCAAGAGAC...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTCTTTGGGTGGTCTCTTaGCCTCCCTGGTCAGATTGC +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSLWVVS*PPWSDC
Trigger: GCAATCTGACCAGGGAGGCCAAGAGACCACCCAAAG...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACAAATTCTTCTTTGGGTaGTCTCTTGGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHKFFFG*SLGLPG
Trigger: ACCAGGGAGGCCAAGAGACCACCCAAAGAAGAATTT...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTGAGGTGTGCATGACCTaGTTCGTGTTCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSEVCMT*FVFFGL
Trigger: GAGGCCAAAGAACACGAACCAGGTCATGCACACCTC...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACGCCTGTGGCATTCAGTaGACATTGATTGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHACGIQ*TLIECQ
Trigger: CTGGCATTCAATCAATGTCCACTGAATGCCACAGGC...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTAGTGTCTTGGTGACCTaGGACATTCCATCACCTGCC +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSSVLVT*DIPSPA
Trigger: GGCAGGTGATGGAATGTCCCAGGTCACCAAGACACT...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAAGTGTCTTGGTGACCTaGGACATTCCATCACCTGCC +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSSVLVT*DIPSPA
Trigger: GGCAGGTGATGGAATGTCCCAGGTCACCAAGACACT...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTGGCGTTACTGGCGGTaGTGGCTGACAAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSWRYWR*WLTKLL
Trigger: CAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTCGCACCTGCGACCCTTaGCCACAAGTAACTGAGCAT +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFRTCDP*PQVTEH
Trigger: ATGCTCAGTTACTTGTGGTCAAGGGTCGCAGGTGCG...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTGTGTGTCCCGTAAGGTaGTACACAAGTTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSVCPVR*YTSSGS
Trigger: CGAACCAGAACTTGTGTATCACCTTACGGGACACAC...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTGCATTCAGTGGACATTaGTTGAATGCCAGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSAFSGH*LNARSP
Trigger: AGGCGACCTGGCATTCAATCAATGTCCACTGAATGC...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCCAATAGTGTCTTGGTaGCCTGGGACATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLPIVSW*PGTFHH
Trigger: GTGATGGAATGTCCCAGGTCACCAAGACACTATTGG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCGCAGCAGGGAGCTTCTaGATGCTCGCCACTACATTT +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGAAGSF*MLATTF
Trigger: AAATGTAGTGGCGAGCATTCAGAAGCTCCCTGCTGC...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGCAGCAGGGAGCTTCTaGATGCTCGCCACTACATTT +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSAAGSF*MLATTF
Trigger: AAATGTAGTGGCGAGCATTCAGAAGCTCCCTGCTGC...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTCACACTTGGCACATTTaGGCGTCAGACCGCTATGAG +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSHTWHI*ASDRYE
Trigger: CTCATAGCGGTCTGACGCTCAAATGTGCCAAGTGTG...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCACTGGCGGTGGTGGCTaGCAAAGCTGTTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGTGGGG*QSCCRN
Trigger: GTTTCTACAACAGCTTTGTCAGCCACCACCGCCAGT...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGCTCTCCTCTTTCATTaGTGGCTGGGTGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSALLFH*WLGAYR
Trigger: TCTGTAAGCACCCAGCCATCAATGAAAGAGGAGAGC...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTGCTCTCCTCTTTCATTaGTGGCTGGGTGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSALLFH*WLGAYR
Trigger: TCTGTAAGCACCCAGCCATCAATGAAAGAGGAGAGC...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCACCAACTCAGAGGCCATaGAATTCTTCACAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSPTQRP*NSSQLC
Trigger: GCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGG...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCCCAACTCAGAGGCCATaGAATTCTTCACAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVPTQRP*NSSQLC
Trigger: GCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGG...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTCTTCCTTGTGTGCATaGCCTTCTCAAAGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLASSLCA*PSQSQG
Trigger: ACCTTGACTTTGAGAAGGTCATGCACACAAGGAAGA...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCATACTGAGGAGGTGTaGATGACCTGGTTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRHTEEV*MTWFVF
Trigger: GAACACGAACCAGGTCATGCACACCTCCTCAGTATG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCATACTGAGGAGGTGTaGATGACCTGGTTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLHTEEV*MTWFVF
Trigger: GAACACGAACCAGGTCATGCACACCTCCTCAGTATG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCGTACCTCTTCACCTGTaGCTTCACACTGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGVPLHL*LHTAVL
Trigger: CAGGACAGCAGTGTGAAGGCACAGGTGAAGAGGTAC...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGTGGACATTGATTGAATaGCAGGTCGCCTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRWTLIE*QVACRS
Trigger: ACTCCTGCAGGCGACCTGGCATTCAATCAATGTCCA...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCTGGACATTGATTGAATaGCAGGTCGCCTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVWTLIE*QVACRS
Trigger: ACTCCTGCAGGCGACCTGGCATTCAATCAATGTCCA...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACATTGGATATGCATCTTaGAAAGCTCGGCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHIGYAS*KARLFP
Trigger: TGGGAACAGCCGAGCTTTGCAAGATGCATATCCAAT...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCGCAGGGATGTAACTTaGCCTTTTAAACGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLARRDVT*PFKRVC
Trigger: ACAGACACGTTTAAAAGGGCAAGTTACATCCCTGCG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTGTCATGGCCAGAACTaGAGACATCCATGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFCHGQN*RHPCQS
Trigger: GCTCTGACATGGATGTCTGCAGTTCTGGCCATGACA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGCGGCAAGGTTTCCATaGCAATATTCATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAAARFP*QYSSCS
Trigger: AGAGCAAGATGAATATTGGCATGGAAACCTTGCCGC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTGTAATAGCCTTTCATaGGGCAAGGTTTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHCNSLS*GKVSMP
Trigger: TGGCATGGAAACCTTGCCGCATGAAAGGCTATTACA...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCCAAGTGCATAAGACATaGCAACCAAACTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVQVHKT*QPNWLG
Trigger: CCCGAGCCAGTTTGGTTGCCATGTCTTATGCACTTG...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTCTCTTGGCCTCCCTaGTCAGATTGCAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSVSWPP*SDCRLE
Trigger: CTCAAGTCTGCAATCTGACCAGGGAGGCCAAGAGAC...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTCTTTGGGTGGTCTCTTaGCCTCCCTGGTCAGATTGC +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFLWVVS*PPWSDC
Trigger: GCAATCTGACCAGGGAGGCCAAGAGACCACCCAAAG...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTCCAAATTCTTCTTTaGGTGGTCTCTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKFQILL*VVSWPP
Trigger: GGGAGGCCAAGAGACCACCCAAAGAAGAATTTGGAA...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCATGTCACTGAGCAGTaGCTCCATGAACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLHVTEQ*LHELHS
Trigger: GGAATGGAGTTCATGGAGCCACTGCTCAGTGACATG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCACATGTCACTGAGCAGTaGCTCCATGAACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSHVTEQ*LHELHS
Trigger: GGAATGGAGTTCATGGAGCCACTGCTCAGTGACATG...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCACCATCACAGGACTTaGAACATCCACTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSHHHRT*NIHSSD
Trigger: GTCACTGGAGTGGATGTTCCAAGTCCTGTGATGGTG...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCACCATCACAGGACTTaGAACATCCACTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLHHHRT*NIHSSD
Trigger: GTCACTGGAGTGGATGTTCCAAGTCCTGTGATGGTG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCACCATCACAGGACTTaGAACATCCACTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSHHHRT*NIHSSD
Trigger: GTCACTGGAGTGGATGTTCCAAGTCCTGTGATGGTG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGCATTGATTGGATCCTaGCAGTTTCTCAACCGGCAT +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKALIGS*QFLNRH
Trigger: ATGCCGGTTGAGAAACTGCCAGGATCCAATCAATGC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTTTGACCACAAGTAACTaGGCATGCGCTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFLTTSN*ACAPLG
Trigger: TCCCAGTGGAGCGCATGCTCAGTTACTTGTGGTCAA...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTGTGTCCCGTAAGGTaGTACACAAGTTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSVCPVR*YTSSGS
Trigger: CGAACCAGAACTTGTGTATCACCTTACGGGACACAC...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTCTGAGGAGGTGTGCATaGCCTGGTTCGTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFLRRCA*PGSCSL
Trigger: CAAAGAACACGAACCAGGTCATGCACACCTCCTCAG...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGGCCTTCCTCCATACTaGGGAGGTGTGCATGACCTG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRGLPPY*GGVHDL
Trigger: CAGGTCATGCACACCTCCTCAGTATGGAGGAAGGCC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCGCATTCAGTGGACATTaGTTGAATGCCAGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGAFSGH*LNARSP
Trigger: AGGCGACCTGGCATTCAATCAATGTCCACTGAATGC...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCAGGTTGCTAACTATTTaGAAGAAGTTCTGGACCCCA +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLARLLTI*KKFWTP
Trigger: TGGGGTCCAGAACTTCTTTCAAATAGTTAGCAACCT...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGTGCCATTTGCCAAGTaGGCTAGCTCTATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSVPFAK*ASSISK
Trigger: TTTGGAGATAGAGCTAGCTCACTTGGCAAATGGCAC...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCGTGCCATTTGCCAAGTaGGCTAGCTCTATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLVPFAK*ASSISK
Trigger: TTTGGAGATAGAGCTAGCTCACTTGGCAAATGGCAC...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGAATGCAGTGGACCATaGCTATCACAAAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKECSGP*LSQSLV
Trigger: TACAAGGCTTTGTGATAGTCATGGTCCACTGCATTC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGAGGCCTGTGGGCTGTTaGATGATGACTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRRPVGC*MMTLEM
Trigger: CATTTCCAAAGTCATCATTCAACAGCCCACAGGCCT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGGCCTGTGGGCTGTTaGATGATGACTTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVRPVGC*MMTLEM
Trigger: CATTTCCAAAGTCATCATTCAACAGCCCACAGGCCT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTCCAGTTTCACTTCTTaGCAGTCCCACATTATCATC +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLASSFTS*QSHIII
Trigger: GATGATAATGTGGGACTGTCAAGAAGTGAAACTGGA...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTCCTTGTGTGCATaGCCTTCTCAAAGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKSSLCA*PSQSQG
Trigger: ACCTTGACTTTGAGAAGGTCATGCACACAAGGAAGA...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTGTACCTCTTCACCTGTaGCTTCACACTGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFVPLHL*LHTAVL
Trigger: CAGGACAGCAGTGTGAAGGCACAGGTGAAGAGGTAC...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTGCCCCTTCGCAAGGTaGTCTTTAATTGAATGCTGC +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSCPFAR*SLIECC
Trigger: GCAGCATTCAATTAAAGAGCACCTTGCGAAGGGGCA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTGCCCCTTCGCAAGGTaGTCTTTAATTGAATGCTGC +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFCPFAR*SLIECC
Trigger: GCAGCATTCAATTAAAGAGCACCTTGCGAAGGGGCA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCACCAGAAGGTCACCTaGATAGAAATTTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAHQKVT*IEIFPL
Trigger: CAGAGGAAAAATTTCTATGCAGGTGACCTTCTGGTG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCAGGGAGCTTCTGAATaGTCGCCACTACATTTCCAG +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGQGASE*SPLHFQ
Trigger: CTGGAAATGTAGTGGCGAGCATTCAGAAGCTCCCTG...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTCAGGGAGCTTCTGAATaGTCGCCACTACATTTCCAG +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSQGASE*SPLHFQ
Trigger: CTGGAAATGTAGTGGCGAGCATTCAGAAGCTCCCTG...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTGGTGGTCGTGCAGATaGTCTTATTGTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFWWSCR*SYCVSE
Trigger: CTCAGACACACAATAAGAGCATCTGCACGACCACCA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCTGGTGGTCGTGCAGATaGTCTTATTGTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVWWSCR*SYCVSE
Trigger: CTCAGACACACAATAAGAGCATCTGCACGACCACCA...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCATGGTGGTCGTGCAGATaGTCTTATTGTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSWWSCR*SYCVSE
Trigger: CTCAGACACACAATAAGAGCATCTGCACGACCACCA...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCTGTCATGGCCAGAACTaGAGACATCCATGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGCHGQN*RHPCQS
Trigger: GCTCTGACATGGATGTCTGCAGTTCTGGCCATGACA...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCAACCGGCATCTAAATaGATCTTGAACCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLQPASK*ILNLSP
Trigger: CGGAGAGAGGTTCAAGATGCATTTAGATGCCGGTTG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAACCGGCATCTAAATaGATCTTGAACCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSQPASK*ILNLSP
Trigger: CGGAGAGAGGTTCAAGATGCATTTAGATGCCGGTTG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCAACCGGCATCTAAATaGATCTTGAACCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFQPASK*ILNLSP
Trigger: CGGAGAGAGGTTCAAGATGCATTTAGATGCCGGTTG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCACAACCGGCATCTAAATaGATCTTGAACCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSQPASK*ILNLSP
Trigger: CGGAGAGAGGTTCAAGATGCATTTAGATGCCGGTTG...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTGCCTCTTCCTTGTGTaGATGACCTTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKCLFLV*MTFSKS
Trigger: TGACTTTGAGAAGGTCATGCACACAAGGAAGAGGCA...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTGGATTCTTGTTTGGTaGTGGGTTTTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHWILVW*WVFHTA
Trigger: AGCAGTATGGAAAACCCAGCACCAAACAAGAATCCA...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCTCCCTTCACCAAAGTaGAACACCAGAAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGLPSPK*NTRSLG
Trigger: CCCAAGACTTCTGGTGTTCCACTTTGGTGAAGGGAG...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGTCCTGGGAAATCAGTTaGAAATACCCGGCGTATCTG +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRSWEIS*KYPAYL
Trigger: CAGATACGCCGGGTATTTCCAACTGATTTCCCAGGA...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCTCCTGGGAAATCAGTTaGAAATACCCGGCGTATCTG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVSWEIS*KYPAYL
Trigger: CAGATACGCCGGGTATTTCCAACTGATTTCCCAGGA...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCATCCTGGGAAATCAGTTaGAAATACCCGGCGTATCTG +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSSWEIS*KYPAYL
Trigger: CAGATACGCCGGGTATTTCCAACTGATTTCCCAGGA...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAAACAGAACCAGGGACTaGTCATCTATTCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSNRTRD*SSIPHS
Trigger: AGAGTGGGGAATAGATGACCAGTCCCTGGTTCTGTT...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAAATTCTTCTTTGGGTaGTCTCTTGGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVKFFFG*SLGLPG
Trigger: ACCAGGGAGGCCAAGAGACCACCCAAAGAAGAATTT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCGTGATACACAAGTTCTaGTTCGCACCTGCGACCCTT +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGVIHKF*FAPATL
Trigger: AAGGGTCGCAGGTGCGAACCAGAACTTGTGTATCAC...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCATGTCACTGAGCAGTaGCTCCATGAACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGHVTEQ*LHELHS
Trigger: GGAATGGAGTTCATGGAGCCACTGCTCAGTGACATG...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTCATGTCACTGAGCAGTaGCTCCATGAACTCCATTCC +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSHVTEQ*LHELHS
Trigger: GGAATGGAGTTCATGGAGCCACTGCTCAGTGACATG...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCGCCTGTGGCATTCAGTaGACATTGATTGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLACGIQ*TLIECQ
Trigger: CTGGCATTCAATCAATGTCCACTGAATGCCACAGGC...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCGCCTGTGGCATTCAGTaGACATTGATTGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVACGIQ*TLIECQ
Trigger: CTGGCATTCAATCAATGTCCACTGAATGCCACAGGC...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCGCCTGTGGCATTCAGTaGACATTGATTGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFACGIQ*TLIECQ
Trigger: CTGGCATTCAATCAATGTCCACTGAATGCCACAGGC...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCATTTTACATCCCTGGGTaGACCACGTTCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSFYIPG*TTFPKT
Trigger: AGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAA...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTTTTACATCCCTGGGTaGACCACGTTCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSFYIPG*TTFPKT
Trigger: AGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAA...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGTTTTACATCCCTGGGTaGACCACGTTCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRFYIPG*TTFPKT
Trigger: AGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAA...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSTVLHP*VDHVPK
Trigger: TTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGT...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFTVLHP*VDHVPK
Trigger: TTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGT...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCGCATTGATTGGATCCTaGCAGTTTCTCAACCGGCAT +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFALIGS*QFLNRH
Trigger: ATGCCGGTTGAGAAACTGCCAGGATCCAATCAATGC...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCGCATTGATTGGATCCTaGCAGTTTCTCAACCGGCAT +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVALIGS*QFLNRH
Trigger: ATGCCGGTTGAGAAACTGCCAGGATCCAATCAATGC...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGGGCCTCGGCCACATGTaGAGGAGCATAAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVGLGHM*RSISSK
Trigger: CTTGGAGCTTATGCTCCTTCACATGTGGCCGAGGCC...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCCTTTTCCACACCATTaGTATAAGATAATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAPFPHH*YKIILW
Trigger: CCAGAGGATTATCTTATATCAATGGTGTGGAAAAGG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTGCATTCAGTGGACATTaGTTGAATGCCAGGTCGCCT +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFAFSGH*LNARSP
Trigger: AGGCGACCTGGCATTCAATCAATGTCCACTGAATGC...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCCTTTCATGGGGAAGTTaGTGTCGGTTAGAACAGATG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVLSWGS*CRLEQM
Trigger: CATCTGTTCTAACCGACATCAACTTCCCCATGAAAG...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTGCCATTTGCCAAGTaGGCTAGCTCTATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSVPFAK*ASSISK
Trigger: TTTGGAGATAGAGCTAGCTCACTTGGCAAATGGCAC...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTATTTCTCTAGGTTGCTaGGCCAAAATGGCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSISLGC*AKMAKV
Trigger: TACCTTCGCCATTTTGGCTCAGCAACCTAGAGAAAT...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCTCTTATTGTGTGTCTaGGTCTGTCCAACCAGTATG +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFLLLCV*VCPTSM
Trigger: CATACTGGTTGGACAGACTCAGACACACAATAAGAG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTCTTATTGTGTGTCTaGGTCTGTCCAACCAGTATG +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSLLLCV*VCPTSM
Trigger: CATACTGGTTGGACAGACTCAGACACACAATAAGAG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCCTCTTATTGTGTGTCTaGGTCTGTCCAACCAGTATG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVLLLCV*VCPTSM
Trigger: CATACTGGTTGGACAGACTCAGACACACAATAAGAG...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGATGCCAATCACCATGTTaGCCAGGACAACAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRCQSPC*PGQQPL
Trigger: CAGCGGCTGTTGTCCTGGTCAACATGGTGATTGGCA...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGAATGCAGTGGACCATaGCTATCACAAAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSECSGP*LSQSLV
Trigger: TACAAGGCTTTGTGATAGTCATGGTCCACTGCATTC...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGGAATGCAGTGGACCATaGCTATCACAAAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRECSGP*LSQSLV
Trigger: TACAAGGCTTTGTGATAGTCATGGTCCACTGCATTC...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCGAATGCAGTGGACCATaGCTATCACAAAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLECSGP*LSQSLV
Trigger: TACAAGGCTTTGTGATAGTCATGGTCCACTGCATTC...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGCATCTAAATGCATCTTaGACCTCTCTCCGAAGAATG +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKHLNAS*TSLRRM
Trigger: CATTCTTCGGAGAGAGGTTCAAGATGCATTTAGATG...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTGCTCTCCTCTTTCATTaGTGGCTGGGTGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFALLFH*WLGAYR
Trigger: TCTGTAAGCACCCAGCCATCAATGAAAGAGGAGAGC...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCTCTTCCTTGTGTGCATaGCCTTCTCAAAGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVSSLCA*PSQSQG
Trigger: ACCTTGACTTTGAGAAGGTCATGCACACAAGGAAGA...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTCTTCCTTGTGTGCATaGCCTTCTCAAAGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFSSLCA*PSQSQG
Trigger: ACCTTGACTTTGAGAAGGTCATGCACACAAGGAAGA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGTCTTCCTTGTGTGCATaGCCTTCTCAAAGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRSSLCA*PSQSQG
Trigger: ACCTTGACTTTGAGAAGGTCATGCACACAAGGAAGA...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTTGGACATTGATTGAATaGCAGGTCGCCTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFWTLIE*QVACRS
Trigger: ACTCCTGCAGGCGACCTGGCATTCAATCAATGTCCA...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCATTGGATATGCATCTTaGAAAGCTCGGCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLIGYAS*KARLFP
Trigger: TGGGAACAGCCGAGCTTTGCAAGATGCATATCCAAT...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGATTGGATATGCATCTTaGAAAGCTCGGCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRIGYAS*KARLFP
Trigger: TGGGAACAGCCGAGCTTTGCAAGATGCATATCCAAT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTGCCCCTTCGCAAGGTaGTCTTTAATTGAATGCTGC +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSCPFAR*SLIECC
Trigger: GCAGCATTCAATTAAAGAGCACCTTGCGAAGGGGCA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGCATTTCGTATGGGATaGATCGGTAAGCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKAFRMG*IGKHSF
Trigger: AAAACTGTGCTTACCGATGCATCCCATACGAAATGC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTGGTGGTCGTGCAGATaGTCTTATTGTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSWWSCR*SYCVSE
Trigger: CTCAGACACACAATAAGAGCATCTGCACGACCACCA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCAGATTGTCATCCGTaGATAAGTACACAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKSDCHP*ISTQFS
Trigger: GGAGAACTGTGTACTTATGCACGGATGACAATCTGA...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCGCGGCAAGGTTTCCATaGCAATATTCATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLAARFP*QYSSCS
Trigger: AGAGCAAGATGAATATTGGCATGGAAACCTTGCCGC...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCGCGGCAAGGTTTCCATaGCAATATTCATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFAARFP*QYSSCS
Trigger: AGAGCAAGATGAATATTGGCATGGAAACCTTGCCGC...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGTGTAATAGCCTTTCATaGGGCAAGGTTTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRCNSLS*GKVSMP
Trigger: TGGCATGGAAACCTTGCCGCATGAAAGGCTATTACA...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTGTAATAGCCTTTCATaGGGCAAGGTTTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSCNSLS*GKVSMP
Trigger: TGGCATGGAAACCTTGCCGCATGAAAGGCTATTACA...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCAAAGGGTAAATTCTaGATATGTTCCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKSKGKF*ICSWGA
Trigger: TGCACCCCAGGAACATATGCAGAATTTACCCTTTGA...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTGCCTCTTCCTTGTGTaGATGACCTTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFCLFLV*MTFSKS
Trigger: TGACTTTGAGAAGGTCATGCACACAAGGAAGAGGCA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTGCCTCTTCCTTGTGTaGATGACCTTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSCLFLV*MTFSKS
Trigger: TGACTTTGAGAAGGTCATGCACACAAGGAAGAGGCA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCTGCCTCTTCCTTGTGTaGATGACCTTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVCLFLV*MTFSKS
Trigger: TGACTTTGAGAAGGTCATGCACACAAGGAAGAGGCA...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTCTCCCTTCACCAAAGTaGAACACCAGAAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFLPSPK*NTRSLG
Trigger: CCCAAGACTTCTGGTGTTCCACTTTGGTGAAGGGAG...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCAACAGAACCAGGGACTaGTCATCTATTCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGNRTRD*SSIPHS
Trigger: AGAGTGGGGAATAGATGACCAGTCCCTGGTTCTGTT...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTAAATTCTTCTTTGGGTaGTCTCTTGGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSKFFFG*SLGLPG
Trigger: ACCAGGGAGGCCAAGAGACCACCCAAAGAAGAATTT...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCTTCCAAATTCTTCTTTaGGTGGTCTCTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGFQILL*VVSWPP
Trigger: GGGAGGCCAAGAGACCACCCAAAGAAGAATTTGGAA...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTTCCAAATTCTTCTTTaGGTGGTCTCTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSFQILL*VVSWPP
Trigger: GGGAGGCCAAGAGACCACCCAAAGAAGAATTTGGAA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCCCAAACTCCATGTACTaGACAGAGGGCAGTGTTATT +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVPNSMY*TEGSVI
Trigger: AATAACACTGCCCTCTGTCCAGTACATGGAGTTTGG...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCAAACTCCATGTACTaGACAGAGGGCAGTGTTATT +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSPNSMY*TEGSVI
Trigger: AATAACACTGCCCTCTGTCCAGTACATGGAGTTTGG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTTTTACATCCCTGGGTaGACCACGTTCCCAAAGACT +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSFYIPG*TTFPKT
Trigger: AGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCTCCGAAGAATGCAGTaGACCATGACTATCACAAAG +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLLRRMQ*TMTITK
Trigger: CTTTGTGATAGTCATGGTCCACTGCATTCTTCGGAG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACCATTTAGAGAAATCCTaGAGAGTGTTCCTGTTATGG +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHHLEKS*RVFLLW
Trigger: CCATAACAGGAACACTCTCCAGGATTTCTCTAAATG...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCATTTAGAGAAATCCTaGAGAGTGTTCCTGTTATGG +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAHLEKS*RVFLLW
Trigger: CCATAACAGGAACACTCTCCAGGATTTCTCTAAATG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTCTTTCATTGATGGCTaGGTGCTTACAGAACTTCTA +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLASFIDG*VLTELL
Trigger: TAGAAGTTCTGTAAGCACCCAGCCATCAATGAAAGA...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCATTCTTGTTTGGTGCTaGGTTTTCCATACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAILVWC*VFHTAC
Trigger: ACAAGCAGTATGGAAAACCCAGCACCAAACAAGAAT...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTAATAGGATCCATAAATaGCTCCCTTCACCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSNRIHK*LPSPKW
Trigger: CCACTTTGGTGAAGGGAGTCATTTATGGATCCTATT...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAAATAGGATCCATAAATaGCTCCCTTCACCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSNRIHK*LPSPKW
Trigger: CCACTTTGGTGAAGGGAGTCATTTATGGATCCTATT...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACTGAGGAGGTGTGCATaGCCTGGTTCGTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRLRRCA*PGSCSL
Trigger: CAAAGAACACGAACCAGGTCATGCACACCTCCTCAG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGATCAGTGGACATTGATTaGATGCCAGGTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRSVDID*MPGRLQ
Trigger: CTGCAGGCGACCTGGCATTCAATCAATGTCCACTGA...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTAGGTTGCTAACTATTTaGAAGAAGTTCTGGACCCCA +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSRLLTI*KKFWTP
Trigger: TGGGGTCCAGAACTTCTTTCAAATAGTTAGCAACCT...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGGTTGCTAACTATTTaGAAGAAGTTCTGGACCCCA +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVRLLTI*KKFWTP
Trigger: TGGGGTCCAGAACTTCTTTCAAATAGTTAGCAACCT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTCTTTCATGGGGAAGTTaGTGTCGGTTAGAACAGATG +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSLSWGS*CRLEQM
Trigger: CATCTGTTCTAACCGACATCAACTTCCCCATGAAAG...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACACACTTGGCACATTTaGGCGTCAGACCGCTATGAG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRHTWHI*ASDRYE
Trigger: CTCATAGCGGTCTGACGCTCAAATGTGCCAAGTGTG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCATCTAAATGCATCTTaGACCTCTCTCCGAAGAATG +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFHLNAS*TSLRRM
Trigger: CATTCTTCGGAGAGAGGTTCAAGATGCATTTAGATG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCATCTAAATGCATCTTaGACCTCTCTCCGAAGAATG +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRHLNAS*TSLRRM
Trigger: CATTCTTCGGAGAGAGGTTCAAGATGCATTTAGATG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCAAGTCTGTCATGATTTaGGCATGTCCATTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAKSVMI*ACPLGK
Trigger: TTTTCCTAATGGACATGCTCAAATCATGACAGACTT...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTGGGGTGCAAGATGCTaGTCTAAGTTCATATTAAAC +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKWGARC*SKFILN
Trigger: GTTTAATATGAACTTAGATCAGCATCTTGCACCCCA...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTCCAGTTTCACTTCTTaGCAGTCCCACATTATCATC +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSSSFTS*QSHIII
Trigger: GATGATAATGTGGGACTGTCAAGAAGTGAAACTGGA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCCGTGTCTAAGACATTaGTTGTGGTGTAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLPCLRH*LWCNVG
Trigger: ACCAACATTACACCACAATCAATGTCTTAGACACGG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCCGTGTCTAAGACATTaGTTGTGGTGTAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSPCLRH*LWCNVG
Trigger: ACCAACATTACACCACAATCAATGTCTTAGACACGG...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCGTGTCTAAGACATTaGTTGTGGTGTAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSPCLRH*LWCNVG
Trigger: ACCAACATTACACCACAATCAATGTCTTAGACACGG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTAGCTTTCCAACCAAGTaGATAAGACATGGCAACCAA +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSSFPTK*IRHGNQ
Trigger: TTGGTTGCCATGTCTTATGCACTTGGTTGGAAAGCT...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGAGCTTTCCAACCAAGTaGATAAGACATGGCAACCAA +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRSFPTK*IRHGNQ
Trigger: TTGGTTGCCATGTCTTATGCACTTGGTTGGAAAGCT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGCTTTCCAACCAAGTaGATAAGACATGGCAACCAA +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVSFPTK*IRHGNQ
Trigger: TTGGTTGCCATGTCTTATGCACTTGGTTGGAAAGCT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGGCAACCCTCCGTCTaGTCATTCAGGGGTAACACG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVRQPSV*SFRGNT
Trigger: CGTGTTACCCCTGAATGAGCAGACGGAGGGTTGCCT...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCAGATTCACCAGTTTGTaGCATAAATTTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLARFTSL*HKFSSI
Trigger: GATGCTGCTAAATTTATGGCACAAACTGGTGAATCT...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGGAATGCCAGGTCGCCTaGAGGAGTCCTTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVECQVA*RSPFPH
Trigger: GTGTGGAAAAGGACTCCTGCAGGCGACCTGGCATTC...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCTGTACTCATTGGATATaGATCTTGCAAAGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVCTHWI*ILQSSA
Trigger: AGCCGAGCTTTGCAAGATGCATATCCAATGAGTACA...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTGTACTCATTGGATATaGATCTTGCAAAGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSCTHWI*ILQSSA
Trigger: AGCCGAGCTTTGCAAGATGCATATCCAATGAGTACA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTGCTCTTTAATTGAATaGTGCAAGTGTCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLACSLIE*CKCLYS
Trigger: TGAGTACAGACACTTGCAGCATTCAATTAAAGAGCA...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTGCTCTTTAATTGAATaGTGCAAGTGTCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHCSLIE*CKCLYS
Trigger: TGAGTACAGACACTTGCAGCATTCAATTAAAGAGCA...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTTGCCCCTTCGCAAGGTaGTCTTTAATTGAATGCTGC +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFCPFAR*SLIECC
Trigger: GCAGCATTCAATTAAAGAGCACCTTGCGAAGGGGCA...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCACCAGAAGGTCACCTaGATAGAAATTTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFHQKVT*IEIFPL
Trigger: CAGAGGAAAAATTTCTATGCAGGTGACCTTCTGGTG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCACCAGAAGGTCACCTaGATAGAAATTTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLHQKVT*IEIFPL
Trigger: CAGAGGAAAAATTTCTATGCAGGTGACCTTCTGGTG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCATGGGTAAATCTGTTGTaGGTCTTCCCATTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSWVNLL*VFPFLL
Trigger: AAGGAGAAATGGGAAGACGCACAACAGATTTACCCA...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTGGGTAAATCTGTTGTaGGTCTTCCCATTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFWVNLL*VFPFLL
Trigger: AAGGAGAAATGGGAAGACGCACAACAGATTTACCCA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTGGGTAAATCTGTTGTaGGTCTTCCCATTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSWVNLL*VFPFLL
Trigger: AAGGAGAAATGGGAAGACGCACAACAGATTTACCCA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGGCATTTCGTATGGGATaGATCGGTAAGCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRAFRMG*IGKHSF
Trigger: AAAACTGTGCTTACCGATGCATCCCATACGAAATGC...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCATCAGATTGTCATCCGTaGATAAGTACACAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSSDCHP*ISTQFS
Trigger: GGAGAACTGTGTACTTATGCACGGATGACAATCTGA...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCGCGGCAAGGTTTCCATaGCAATATTCATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGAARFP*QYSSCS
Trigger: AGAGCAAGATGAATATTGGCATGGAAACCTTGCCGC...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTGTAATAGCCTTTCATaGGGCAAGGTTTCCATGCCA +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSCNSLS*GKVSMP
Trigger: TGGCATGGAAACCTTGCCGCATGAAAGGCTATTACA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTCAAAGGGTAAATTCTaGATATGTTCCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSSKGKF*ICSWGA
Trigger: TGCACCCCAGGAACATATGCAGAATTTACCCTTTGA...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTCAAAGGGTAAATTCTaGATATGTTCCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFSKGKF*ICSWGA
Trigger: TGCACCCCAGGAACATATGCAGAATTTACCCTTTGA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTGGATTCTTGTTTGGTaGTGGGTTTTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLWILVW*WVFHTA
Trigger: AGCAGTATGGAAAACCCAGCACCAAACAAGAATCCA...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCTGGATTCTTGTTTGGTaGTGGGTTTTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVWILVW*WVFHTA
Trigger: AGCAGTATGGAAAACCCAGCACCAAACAAGAATCCA...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGATATTTGGTTGGATCTaGATTTTCCAGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKIFGWI*IFQCPG
Trigger: ACCTGGACACTGGAAAATCCAGATCCAACCAAATAT...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGTCTCTTGGCCTCCCTaGTCAGATTGCAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRVSWPP*SDCRLE
Trigger: CTCAAGTCTGCAATCTGACCAGGGAGGCCAAGAGAC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGAGGTGTGCATGACCTaGTTCGTGTTCTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVREVCMT*FVFFGL
Trigger: GAGGCCAAAGAACACGAACCAGGTCATGCACACCTC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFTVLHP*VDHVPK
Trigger: TTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGT...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCATAAGCATTTCGTATaGGATGCATCGGTAAGCACA +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLHKHFV*DASVST
Trigger: TGTGCTTACCGATGCATCCCATACGAAATGCTTATG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCATAAGCATTTCGTATaGGATGCATCGGTAAGCACA +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSHKHFV*DASVST
Trigger: TGTGCTTACCGATGCATCCCATACGAAATGCTTATG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGTGGCGTTACTGGCGGTaGTGGCTGACAAAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVWRYWR*WLTKLL
Trigger: CAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCA...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACGTATCTGAAACAATATaGAGCGTTTATCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHVSETI*SVYLSW
Trigger: CCATGACAGATAAACGCTCCATATTGTTTCAGATAC...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCTCCGAAGAATGCAGTaGACCATGACTATCACAAAG +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGLRRMQ*TMTITK
Trigger: CTTTGTGATAGTCATGGTCCACTGCATTCTTCGGAG...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGCATTTAGAGAAATCCTaGAGAGTGTTCCTGTTATGG +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKHLEKS*RVFLLW
Trigger: CCATAACAGGAACACTCTCCAGGATTTCTCTAAATG...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCCCATGGATTCTTGTTTaGTGCTGGGTTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVPWILV*CWVFHT
Trigger: AGTATGGAAAACCCAGCACCAAACAAGAATCCATGG...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCCATGGATTCTTGTTTaGTGCTGGGTTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLPWILV*CWVFHT
Trigger: AGTATGGAAAACCCAGCACCAAACAAGAATCCATGG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCACCATGGATTCTTGTTTaGTGCTGGGTTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSPWILV*CWVFHT
Trigger: AGTATGGAAAACCCAGCACCAAACAAGAATCCATGG...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGTTGACCACAAGTAACTaGGCATGCGCTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVLTTSN*ACAPLG
Trigger: TCCCAGTGGAGCGCATGCTCAGTTACTTGTGGTCAA...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCCCTTTTCCACACCATTaGTATAAGATAATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVPFPHH*YKIILW
Trigger: CCAGAGGATTATCTTATATCAATGGTGTGGAAAAGG...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCAGGTTGCTAACTATTTaGAAGAAGTTCTGGACCCCA +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGRLLTI*KKFWTP
Trigger: TGGGGTCCAGAACTTCTTTCAAATAGTTAGCAACCT...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGGCAGCAGGGAGCTTCTaGATGCTCGCCACTACATTT +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVAAGSF*MLATTF
Trigger: AAATGTAGTGGCGAGCATTCAGAAGCTCCCTGCTGC...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTTGAAGACACGGGAGTaGAAATGCTTTTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSLKTRE*KCFLES
Trigger: TGATTCCAAAAAGCATTTTCACTCCCGTGTCTTCAA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTCTCTTATTGTGTGTCTaGGTCTGTCCAACCAGTATG +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFLLLCV*VCPTSM
Trigger: CATACTGGTTGGACAGACTCAGACACACAATAAGAG...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACTGCCAATCACCATGTTaGCCAGGACAACAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENCQSPC*PGQQPL
Trigger: CAGCGGCTGTTGTCCTGGTCAACATGGTGATTGGCA...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGAAGTCTGTCATGATTTaGGCATGTCCATTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKKSVMI*ACPLGK
Trigger: TTTTCCTAATGGACATGCTCAAATCATGACAGACTT...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGCTCTCCTCTTTCATTaGTGGCTGGGTGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRALLFH*WLGAYR
Trigger: TCTGTAAGCACCCAGCCATCAATGAAAGAGGAGAGC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTGGGGTGCAAGATGCTaGTCTAAGTTCATATTAAAC +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLWGARC*SKFILN
Trigger: GTTTAATATGAACTTAGATCAGCATCTTGCACCCCA...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCTGGGGTGCAAGATGCTaGTCTAAGTTCATATTAAAC +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVWGARC*SKFILN
Trigger: GTTTAATATGAACTTAGATCAGCATCTTGCACCCCA...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTTGGAACTGCAAAGTTaGATTATGGAATGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLALELQS*IMEWFF
Trigger: AAAGAACCATTCCATAATGCAACTTTGCAGTTCCAA...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCAAGCATTCTTGGAACTaGAAAGTTGCATTATGGAAT +
Preference number: 4 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAKHSWN*KVALWN
Trigger: ATTCCATAATGCAACTTTGCAGTTCCAAGAATGCTT...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGAGATTCACCAGTTTGTaGCATAAATTTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKRFTSL*HKFSSI
Trigger: GATGCTGCTAAATTTATGGCACAAACTGGTGAATCT...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACCTCTTAATGGGCCGCTaGAGTGTGTCCCGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENLLMGR*SVSRKV
Trigger: CACCTTACGGGACACACTGCAGCGGCCCATTAAGAG...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTAGAGGGCAGTGTTATTaGAAACCCTTGATTCTCTTA +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSRGQCY*KPLILL
Trigger: TAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCT...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGGTACCTCTTCACCTGTaGCTTCACACTGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVVPLHL*LHTAVL
Trigger: CAGGACAGCAGTGTGAAGGCACAGGTGAAGAGGTAC...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTGTACTCATTGGATATaGATCTTGCAAAGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSCTHWI*ILQSSA
Trigger: AGCCGAGCTTTGCAAGATGCATATCCAATGAGTACA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCTGGGTAAATCTGTTGTaGGTCTTCCCATTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGWVNLL*VFPFLL
Trigger: AAGGAGAAATGGGAAGACGCACAACAGATTTACCCA...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGACAGCCATATACGACTaGCACGCCTCTGTCAAGACC +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVTAIYD*HASVKT
Trigger: GGTCTTGACAGAGGCGTGGCAGTCGTATATGGCTGT...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACAAGTGCATAAGACATaGCAACCAAACTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRQVHKT*QPNWLG
Trigger: CCCGAGCCAGTTTGGTTGCCATGTCTTATGCACTTG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTAGTGTCTGTACTCATTaGATATGCATCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSSVCTH*ICILQS
Trigger: GCTTTGCAAGATGCATATCCAATGAGTACAGACACT...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGAGTGTCTGTACTCATTaGATATGCATCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRSVCTH*ICILQS
Trigger: GCTTTGCAAGATGCATATCCAATGAGTACAGACACT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGTGTCTTGGTGACCTaGGACATTCCATCACCTGCC +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVSVLVT*DIPSPA
Trigger: GGCAGGTGATGGAATGTCCCAGGTCACCAAGACACT...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTCATAAGCATTTCGTATaGGATGCATCGGTAAGCACA +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSHKHFV*DASVST
Trigger: TGTGCTTACCGATGCATCCCATACGAAATGCTTATG...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCATTTAGAGAAATCCTaGAGAGTGTTCCTGTTATGG +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLHLEKS*RVFLLW
Trigger: CCATAACAGGAACACTCTCCAGGATTTCTCTAAATG...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTCTTTCATTGATGGCTaGGTGCTTACAGAACTTCTA +
Preference number: 4 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSSFIDG*VLTELL
Trigger: TAGAAGTTCTGTAAGCACCCAGCCATCAATGAAAGA...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTCTTTCATTGATGGCTaGGTGCTTACAGAACTTCTA +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFSFIDG*VLTELL
Trigger: TAGAAGTTCTGTAAGCACCCAGCCATCAATGAAAGA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCATTCTTGTTTGGTGCTaGGTTTTCCATACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLILVWC*VFHTAC
Trigger: ACAAGCAGTATGGAAAACCCAGCACCAAACAAGAAT...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCATTCTTGTTTGGTGCTaGGTTTTCCATACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFILVWC*VFHTAC
Trigger: ACAAGCAGTATGGAAAACCCAGCACCAAACAAGAAT...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTATTCTTGTTTGGTGCTaGGTTTTCCATACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSILVWC*VFHTAC
Trigger: ACAAGCAGTATGGAAAACCCAGCACCAAACAAGAAT...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTCCATGGATTCTTGTTTaGTGCTGGGTTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSPWILV*CWVFHT
Trigger: AGTATGGAAAACCCAGCACCAAACAAGAATCCATGG...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACGCATCAGCTTGTTCCTaGGGGACCCTTTTCTCATGG +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENASACS*GTLFSW
Trigger: CCATGAGAAAAGGGTCCCTCAGGAACAAGCTGATGC...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGGTGTGTCCCGTAAGGTaGTACACAAGTTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVVCPVR*YTSSGS
Trigger: CGAACCAGAACTTGTGTATCACCTTACGGGACACAC...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTCCTTTTCCACACCATTaGTATAAGATAATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSPFPHH*YKIILW
Trigger: CCAGAGGATTATCTTATATCAATGGTGTGGAAAAGG...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACTCAGTGGACATTGATTaGATGCCAGGTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENSVDID*MPGRLQ
Trigger: CTGCAGGCGACCTGGCATTCAATCAATGTCCACTGA...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCCAATAGTGTCTTGGTaGCCTGGGACATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVPIVSW*PGTFHH
Trigger: GTGATGGAATGTCCCAGGTCACCAAGACACTATTGG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCTTGAAGACACGGGAGTaGAAATGCTTTTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGLKTRE*KCFLES
Trigger: TGATTCCAAAAAGCATTTTCACTCCCGTGTCTTCAA...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTTGAAGACACGGGAGTaGAAATGCTTTTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSLKTRE*KCFLES
Trigger: TGATTCCAAAAAGCATTTTCACTCCCGTGTCTTCAA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTCTATCTCCAAAAATaGGTCAGTTGTTTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRLYLQK*VSCFRF
Trigger: GAACCTAAAACAACTGACTCATTTTTGGAGATAGAG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCACTCTATCTCCAAAAATaGGTCAGTTGTTTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSLYLQK*VSCFRF
Trigger: GAACCTAAAACAACTGACTCATTTTTGGAGATAGAG...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTATCTCCAAAAATaGGTCAGTTGTTTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSLYLQK*VSCFRF
Trigger: GAACCTAAAACAACTGACTCATTTTTGGAGATAGAG...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGTGCCATTTGCCAAGTaGGCTAGCTCTATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRVPFAK*ASSISK
Trigger: TTTGGAGATAGAGCTAGCTCACTTGGCAAATGGCAC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACCACACTTGGCACATTTaGGCGTCAGACCGCTATGAG +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENHTWHI*ASDRYE
Trigger: CTCATAGCGGTCTGACGCTCAAATGTGCCAAGTGTG...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGACGGCAAAAAGTATCTaGAACAATATGGAGCGTTTA +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRTAKSI*NNMERL
Trigger: TAAACGCTCCATATTGTTTCAGATACTTTTTGCCGT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCACGGCAAAAAGTATCTaGAACAATATGGAGCGTTTA +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVTAKSI*NNMERL
Trigger: TAAACGCTCCATATTGTTTCAGATACTTTTTGCCGT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCACGGCAAAAAGTATCTaGAACAATATGGAGCGTTTA +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLTAKSI*NNMERL
Trigger: TAAACGCTCCATATTGTTTCAGATACTTTTTGCCGT...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGAAGTCTGTCATGATTTaGGCATGTCCATTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRKSVMI*ACPLGK
Trigger: TTTTCCTAATGGACATGCTCAAATCATGACAGACTT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTGGGGTGCAAGATGCTaGTCTAAGTTCATATTAAAC +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSWGARC*SKFILN
Trigger: GTTTAATATGAACTTAGATCAGCATCTTGCACCCCA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCCAACTCAGAGGCCATaGAATTCTTCACAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVPTQRP*NSSQLC
Trigger: GCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTTCCAGTTTCACTTCTTaGCAGTCCCACATTATCATC +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFSSFTS*QSHIII
Trigger: GATGATAATGTGGGACTGTCAAGAAGTGAAACTGGA...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGATTCACCAGTTTGTaGCATAAATTTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVRFTSL*HKFSSI
Trigger: GATGCTGCTAAATTTATGGCACAAACTGGTGAATCT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTAGAGGGCAGTGTTATTaGAAACCCTTGATTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSRGQCY*KPLILL
Trigger: TAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCT...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCATACTGAGGAGGTGTaGATGACCTGGTTCGTGTTC +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVHTEEV*MTWFVF
Trigger: GAACACGAACCAGGTCATGCACACCTCCTCAGTATG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAAATATGGATTCAAAGTaGCATTTGCCAAGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSNMDSK*HLPSEL
Trigger: TAGCTCACTTGGCAAATGGCACTTTGAATCCATATT...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGTGTCATGGCCAGAACTaGAGACATCCATGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVCHGQN*RHPCQS
Trigger: GCTCTGACATGGATGTCTGCAGTTCTGGCCATGACA...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTTGGATTCTTGTTTGGTaGTGGGTTTTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFWILVW*WVFHTA
Trigger: AGCAGTATGGAAAACCCAGCACCAAACAAGAATCCA...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCTCCCTTCACCAAAGTaGAACACCAGAAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVLPSPK*NTRSLG
Trigger: CCCAAGACTTCTGGTGTTCCACTTTGGTGAAGGGAG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTATATTTGGTTGGATCTaGATTTTCCAGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSIFGWI*IFQCPG
Trigger: ACCTGGACACTGGAAAATCCAGATCCAACCAAATAT...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACACATGGCAACCAAACTaGCTCGGGCTCACCTTGTTC +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENTWQPN*LGLTLF
Trigger: GAACAAGGTGAGCCCGAGCCAGTTTGGTTGCCATGT...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCAAGTGCATAAGACATaGCAACCAAACTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVQVHKT*QPNWLG
Trigger: CCCGAGCCAGTTTGGTTGCCATGTCTTATGCACTTG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGATTCCAAATTCTTCTTTaGGTGGTCTCTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRFQILL*VVSWPP
Trigger: GGGAGGCCAAGAGACCACCCAAAGAAGAATTTGGAA...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGAGTGAAAATGCTTTTTaGAATCACAACGCGATCTTC +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRSENAF*NHNAIF
Trigger: GAAGATCGCGTTGTGATTCCAAAAAGCATTTTCACT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTCATAAGCATTTCGTATaGGATGCATCGGTAAGCACA +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFHKHFV*DASVST
Trigger: TGTGCTTACCGATGCATCCCATACGAAATGCTTATG...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCGTATCTGAAACAATATaGAGCGTTTATCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLVSETI*SVYLSW
Trigger: CCATGACAGATAAACGCTCCATATTGTTTCAGATAC...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACCCAATAGTGTCTTGGTaGCCTGGGACATTCCATCAC +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENPIVSW*PGTFHH
Trigger: GTGATGGAATGTCCCAGGTCACCAAGACACTATTGG...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACTTTCATGGGGAAGTTaGTGTCGGTTAGAACAGATG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRLSWGS*CRLEQM
Trigger: CATCTGTTCTAACCGACATCAACTTCCCCATGAAAG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTTTGAAGACACGGGAGTaGAAATGCTTTTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFLKTRE*KCFLES
Trigger: TGATTCCAAAAAGCATTTTCACTCCCGTGTCTTCAA...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTACGGCAAAAAGTATCTaGAACAATATGGAGCGTTTA +
Preference number: 4 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSTAKSI*NNMERL
Trigger: TAAACGCTCCATATTGTTTCAGATACTTTTTGCCGT...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTTGGGGTGCAAGATGCTaGTCTAAGTTCATATTAAAC +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFWGARC*SKFILN
Trigger: GTTTAATATGAACTTAGATCAGCATCTTGCACCCCA...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTTGGAACTGCAAAGTTaGATTATGGAATGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSLELQS*IMEWFF
Trigger: AAAGAACCATTCCATAATGCAACTTTGCAGTTCCAA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAATTGGATATGCATCTTaGAAAGCTCGGCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRIGYAS*KARLFP
Trigger: TGGGAACAGCCGAGCTTTGCAAGATGCATATCCAAT...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGAAATCTTCAATCACCTaGATTAACTCTATTGAGCCT +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRKSSIT*INSIEP
Trigger: AGGCTCAATAGAGTTAATGCAGGTGATTGAAGATTT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAAATCTTCAATCACCTaGATTAACTCTATTGAGCCT +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVKSSIT*INSIEP
Trigger: AGGCTCAATAGAGTTAATGCAGGTGATTGAAGATTT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACCAGGGAGCTTCTGAATaGTCGCCACTACATTTCCAG +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENQGASE*SPLHFQ
Trigger: CTGGAAATGTAGTGGCGAGCATTCAGAAGCTCCCTG...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCAATATGGATTCAAAGTaGCATTTGCCAAGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGNMDSK*HLPSEL
Trigger: TAGCTCACTTGGCAAATGGCACTTTGAATCCATATT...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCAACCGGCATCTAAATaGATCTTGAACCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVQPASK*ILNLSP
Trigger: CGGAGAGAGGTTCAAGATGCATTTAGATGCCGGTTG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGAATGCTATATTTGGTTaGATCTGGATTTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRNAIFG*IWIFQC
Trigger: ACACTGGAAAATCCAGATCCAACCAAATATAGCATT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAATGCTATATTTGGTTaGATCTGGATTTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVNAIFG*IWIFQC
Trigger: ACACTGGAAAATCCAGATCCAACCAAATATAGCATT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACCAAACTCCATGTACTaGACAGAGGGCAGTGTTATT +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRPNSMY*TEGSVI
Trigger: AATAACACTGCCCTCTGTCCAGTACATGGAGTTTGG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACCACCATCACAGGACTTaGAACATCCACTCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENHHHRT*NIHSSD
Trigger: GTCACTGGAGTGGATGTTCCAAGTCCTGTGATGGTG...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACTCCGAAGAATGCAGTaGACCATGACTATCACAAAG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRLRRMQ*TMTITK
Trigger: CTTTGTGATAGTCATGGTCCACTGCATTCTTCGGAG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGATTTCTCTAGGTTGCTaGGCCAAAATGGCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVISLGC*AKMAKV
Trigger: TACCTTCGCCATTTTGGCTCAGCAACCTAGAGAAAT...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTACGGCAAAAAGTATCTaGAACAATATGGAGCGTTTA +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFTAKSI*NNMERL
Trigger: TAAACGCTCCATATTGTTTCAGATACTTTTTGCCGT...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGGAATGCAGTGGACCATaGCTATCACAAAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVECSGP*LSQSLV
Trigger: TACAAGGCTTTGTGATAGTCATGGTCCACTGCATTC...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCGCAGGGATGTAACTTaGCCTTTTAAACGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVRRDVT*PFKRVC
Trigger: ACAGACACGTTTAAAAGGGCAAGTTACATCCCTGCG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGGCGGCAAGGTTTCCATaGCAATATTCATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVAARFP*QYSSCS
Trigger: AGAGCAAGATGAATATTGGCATGGAAACCTTGCCGC...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACAAATTCTTCTTTGGGTaGTCTCTTGGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENKFFFG*SLGLPG
Trigger: ACCAGGGAGGCCAAGAGACCACCCAAAGAAGAATTT...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTAGTGAAAATGCTTTTTaGAATCACAACGCGATCTTC +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFSENAF*NHNAIF
Trigger: GAAGATCGCGTTGTGATTCCAAAAAGCATTTTCACT...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENTVLHP*VDHVPK
Trigger: TTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGT...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCTCCGAAGAATGCAGTaGACCATGACTATCACAAAG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVLRRMQ*TMTITK
Trigger: CTTTGTGATAGTCATGGTCCACTGCATTCTTCGGAG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACCATGGATTCTTGTTTaGTGCTGGGTTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRPWILV*CWVFHT
Trigger: AGTATGGAAAACCCAGCACCAAACAAGAATCCATGG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACATTTCTCTAGGTTGCTaGGCCAAAATGGCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENISLGC*AKMAKV
Trigger: TACCTTCGCCATTTTGGCTCAGCAACCTAGAGAAAT...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACCTCTTATTGTGTGTCTaGGTCTGTCCAACCAGTATG +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENLLLCV*VCPTSM
Trigger: CATACTGGTTGGACAGACTCAGACACACAATAAGAG...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTAAGCATTCTTGGAACTaGAAAGTTGCATTATGGAAT +
Preference number: 4 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFKHSWN*KVALWN
Trigger: ATTCCATAATGCAACTTTGCAGTTCCAAGAATGCTT...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAAGAGGGCAGTGTTATTaGAAACCCTTGATTCTCTTA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRRGQCY*KPLILL
Trigger: TAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCT...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACCGCAGGGATGTAACTTaGCCTTTTAAACGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENRRDVT*PFKRVC
Trigger: ACAGACACGTTTAAAAGGGCAAGTTACATCCCTGCG...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGTCAGATTGTCATCCGTaGATAAGTACACAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVSDCHP*ISTQFS
Trigger: GGAGAACTGTGTACTTATGCACGGATGACAATCTGA...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGTCAAAGGGTAAATTCTaGATATGTTCCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVSKGKF*ICSWGA
Trigger: TGCACCCCAGGAACATATGCAGAATTTACCCTTTGA...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACTGCCTCTTCCTTGTGTaGATGACCTTCTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENCLFLV*MTFSKS
Trigger: TGACTTTGAGAAGGTCATGCACACAAGGAAGAGGCA...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGTGGATTCTTGTTTGGTaGTGGGTTTTCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVWILVW*WVFHTA
Trigger: AGCAGTATGGAAAACCCAGCACCAAACAAGAATCCA...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACATTTAGAGAAATCCTaGAGAGTGTTCCTGTTATGG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRHLEKS*RVFLLW
Trigger: CCATAACAGGAACACTCTCCAGGATTTCTCTAAATG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAATTCTTGTTTGGTGCTaGGTTTTCCATACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRILVWC*VFHTAC
Trigger: ACAAGCAGTATGGAAAACCCAGCACCAAACAAGAAT...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCCTTTTCCACACCATTaGTATAAGATAATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVPFPHH*YKIILW
Trigger: CCAGAGGATTATCTTATATCAATGGTGTGGAAAAGG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACTCTATCTCCAAAAATaGGTCAGTTGTTTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRLYLQK*VSCFRF
Trigger: GAACCTAAAACAACTGACTCATTTTTGGAGATAGAG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACCATCTAAATGCATCTTaGACCTCTCTCCGAAGAATG +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENHLNAS*TSLRRM
Trigger: CATTCTTCGGAGAGAGGTTCAAGATGCATTTAGATG...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR TCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAAAGTCTGTCATGATTTaGGCATGTCCATTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRKSVMI*ACPLGK
Trigger: TTTTCCTAATGGACATGCTCAAATCATGACAGACTT...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACCACCAGAAGGTCACCTaGATAGAAATTTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENHQKVT*IEIFPL
Trigger: CAGAGGAAAAATTTCTATGCAGGTGACCTTCTGGTG...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACGCATTTCGTATGGGATaGATCGGTAAGCACAGTTTT +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENAFRMG*IGKHSF
Trigger: AAAACTGTGCTTACCGATGCATCCCATACGAAATGC...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACTCAGATTGTCATCCGTaGATAAGTACACAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENSDCHP*ISTQFS
Trigger: GGAGAACTGTGTACTTATGCACGGATGACAATCTGA...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGTGTCTGTACTCATTaGATATGCATCTTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVSVCTH*ICILQS
Trigger: GCTTTGCAAGATGCATATCCAATGAGTACAGACACT...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGTATCTGAAACAATATaGAGCGTTTATCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRVSETI*SVYLSW
Trigger: CCATGACAGATAAACGCTCCATATTGTTTCAGATAC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGTCTTTCATTGATGGCTaGGTGCTTACAGAACTTCTA +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVSFIDG*VLTELL
Trigger: TAGAAGTTCTGTAAGCACCCAGCCATCAATGAAAGA...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAAAGCATTCTTGGAACTaGAAAGTTGCATTATGGAAT +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRKHSWN*KVALWN
Trigger: ATTCCATAATGCAACTTTGCAGTTCCAAGAATGCTT...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGTGCTCTTTAATTGAATaGTGCAAGTGTCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVCSLIE*CKCLYS
Trigger: TGAGTACAGACACTTGCAGCATTCAATTAAAGAGCA...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAAAATCTTCAATCACCTaGATTAACTCTATTGAGCCT +
Preference number: 4 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRKSSIT*INSIEP
Trigger: AGGCTCAATAGAGTTAATGCAGGTGATTGAAGATTT...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAATATGGATTCAAAGTaGCATTTGCCAAGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVNMDSK*HLPSEL
Trigger: TAGCTCACTTGGCAAATGGCACTTTGAATCCATATT...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CCA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGGTATCTGAAACAATATaGAGCGTTTATCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVVSETI*SVYLSW
Trigger: CCATGACAGATAAACGCTCCATATTGTTTCAGATAC...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR GCA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACTGCTCTTTAATTGAATaGTGCAAGTGTCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: YFIHSCSRESYSEPSRENCSLIE*CKCLYS
Trigger: TGAGTACAGACACTTGCAGCATTCAATTAAAGAGCA...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 90 bp GTGCTGGGCACCGCTGCTCACTGCATCTTCGTACCTCTTCACCTGTaGCTTCACACTGCTGTCCTGTTACAGCTGCGCCCTGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: VLGTAAHCIFVPLHL*LHTAVLLQLRPDKS
Trigger: GGACTTGTCAGGGCGCAGCTGTAACAGGACAGCAGTGTGAAGGCACAGGTGAAGAGGTACGAAGATGCAGTGAGCAGCGGTGCCCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGTGTTCCTGTTATGGTaGCTGCGCGGCAGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKVFLLW*LRGRGR
Trigger: TCGGCCCCTGCCGCGCAGCAACCATAACAGGAACAC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 90 bp TTCAGGTCCCTCACAGGGCCTTCCTCCATACTGAGGAGGTGTGCATaGCCTGGTTCGTGTTCTTTGGCCTCGGCCACATGTGAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: FRSLTGPSSILRRCA*PGSCSLASATCEGA
Trigger: TGCTCCTTCACATGTGGCCGAGGCCAAAGAACACGAACCAGGTCATGCACACCTCCTCAGTATGGAGGAAGGCCCTGTGAGGGACCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 90 bp ATTGGCTGTACATTCAGGGTTGTAGCACTCCCTGCTTTCAGCCCATaGTCCTCGGCACTCAGAGCCTCCATGAGCAGCTGCTGTGCACTG +
Preference number: 5 (lower is better)
Translates to: IGCTFRVVALPAFSP*SSALRASMSSCCAL
Trigger: CAGTGCACAGCAGCTGCTCATGGAGGCTCTGAGTGCCGAGGACCATGGGCTGAAAGCAGGGAGTGCTACAACCCTGAATGTACAGCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 90 bp TCGTACCTCTTCACCTGTGCCTTCACACTGCTGTCCTGTTACAGCTaGGCCCTGACAAGTCCTCATTCTCCTCTCCCAGCCACCATCACA +
Preference number: 5 (lower is better)
Translates to: SYLFTCAFTLLSCYS*ALTSPHSPLPATIT
Trigger: TGTGATGGTGGCTGGGAGAGGAGAATGAGGACTTGTCAGGGCGCAGCTGTAACAGGACAGCAGTGTGAAGGCACAGGTGAAGAGGTACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTGTTCCTGTTATGGTaGCTGCGCGGCAGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSVFLLW*LRGRGR
Trigger: TCGGCCCCTGCCGCGCAGCAACCATAACAGGAACAC...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCGTGTTCCTGTTATGGTaGCTGCGCGGCAGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGVFLLW*LRGRGR
Trigger: TCGGCCCCTGCCGCGCAGCAACCATAACAGGAACAC...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 90 bp TACACAAGTTCTGGTTCGCACCTGCGACCCTTGACCACAAGTAACTaGGCATGCGCTCCACTGGGACCACTCTTCCACACCAGATTCACC +
Preference number: 5 (lower is better)
Translates to: YTSSGSHLRPLTTSN*ACAPLGPLFHTRFT
Trigger: GGTGAATCTGGTGTGGAAGAGTGGTCCCAGTGGAGCGCATGCTCAGTTACTTGTGGTCAAGGGTCGCAGGTGCGAACCAGAACTTGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 90 bp TGCCGACTCCTCTGCTGTGTCCCATTAGAACATGTCACTGAGCAGTaGCTCCATGAACTCCATTCCTGCCACTGTCCGTCAACTGGACAG +
Preference number: 5 (lower is better)
Translates to: CRLLCCVPLEHVTEQ*LHELHSCHCPSTGQ
Trigger: CTGTCCAGTTGACGGACAGTGGCAGGAATGGAGTTCATGGAGCCACTGCTCAGTGACATGTTCTAATGGGACACAGCAGAGGAGTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 90 bp CCTGACAAGTCCTCATTCTCCTCTCCCAGCCACCATCACAGGACTTaGAACATCCACTCCAGTGACCCCACTGATTCCACTGACCATTGG +
Preference number: 5 (lower is better)
Translates to: PDKSSFSSPSHHHRT*NIHSSDPTDSTDHW
Trigger: CCAATGGTCAGTGGAATCAGTGGGGTCACTGGAGTGGATGTTCCAAGTCCTGTGATGGTGGCTGGGAGAGGAGAATGAGGACTTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGCAGACTTGAGTAGTTaGCAGCTCCTGAGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAADLSS*QLLSQA
Trigger: TGCCTGACTCAGGAGCTGCAAACTACTCAAGTCTGC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTTGGGTGGTCTCTaGGCCTCCCTGGTCAGATTG +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKSLGGL*ASLVRL
Trigger: CAATCTGACCAGGGAGGCCAAGAGACCACCCAAAGA...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACGGCATTCAGTGGACATaGATTGAATGCCAGGTCGCC +
Preference number: 5 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHGIQWT*IECQVA
Trigger: GGCGACCTGGCATTCAATCAATGTCCACTGAATGCC...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTGTGTTCCTGTTATGGTaGCTGCGCGGCAGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFVFLLW*LRGRGR
Trigger: TCGGCCCCTGCCGCGCAGCAACCATAACAGGAACAC...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 90 bp AATCCTCTGGGCATATTTCATAAGGTGCTGGGCACCGCTGCTCACTaGATCTTCGTACCTCTTCACCTGTGCCTTCACACTGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: NPLGIFHKVLGTAAH*IFVPLHLCLHTAVL
Trigger: CAGGACAGCAGTGTGAAGGCACAGGTGAAGAGGTACGAAGATGCAGTGAGCAGCGGTGCCCAGCACCTTATGAAATATGCCCAGAGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTGGCTCGGGCTCACCTaGTTCAGTACCAAAAACTCA +
Preference number: 5 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHWLGLT*FSTKNS
Trigger: TGAGTTTTTGGTACTGAACAAGGTGAGCCCGAGCCA...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGCAGACTTGAGTAGTTaGCAGCTCCTGAGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKADLSS*QLLSQA
Trigger: TGCCTGACTCAGGAGCTGCAAACTACTCAAGTCTGC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGGTCAGATTGCAGACTaGAGTAGTTTGCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAGQIAD*SSLQLL
Trigger: CAGGAGCTGCAAACTACTCAAGTCTGCAATCTGACC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTCTTTGGGTGGTCTCTaGGCCTCCCTGGTCAGATTG +
Preference number: 5 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFSLGGL*ASLVRL
Trigger: CAATCTGACCAGGGAGGCCAAGAGACCACCCAAAGA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCATTGGATATGCATCTaGCAAAGCTCGGCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAHWICI*QSSAVP
Trigger: GGGAACAGCCGAGCTTTGCAAGATGCATATCCAATG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 90 bp ACAGGAGCTCCAAAGAGAGGCCATGGCGTTACTGGCGGTGGTGGCTaGCAAAGCTGTTGTAGAAACTACTCCACACTTGGCACATTTGAG +
Preference number: 5 (lower is better)
Translates to: TGAPKRGHGVTGGGG*QSCCRNYSTLGTFE
Trigger: CTCAAATGTGCCAAGTGTGGAGTAGTTTCTACAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCATGGCCTCTCTTTGGAGCTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTTTAGCAGCATCAGCTaGTTCCTGAGGGACCCTTTT +
Preference number: 5 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHFSSIS*FLRDPF
Trigger: AAAAGGGTCCCTCAGGAACAAGCTGATGCTGCTAAA...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCATTCAGTGGACATaGATTGAATGCCAGGTCGCC +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSGIQWT*IECQVA
Trigger: GGCGACCTGGCATTCAATCAATGTCCACTGAATGCC...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTGGCATTCAGTGGACATaGATTGAATGCCAGGTCGCC +
Preference number: 5 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSGIQWT*IECQVA
Trigger: GGCGACCTGGCATTCAATCAATGTCCACTGAATGCC...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCGGCATTCAGTGGACATaGATTGAATGCCAGGTCGCC +
Preference number: 5 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLGIQWT*IECQVA
Trigger: GGCGACCTGGCATTCAATCAATGTCCACTGAATGCC...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGAAACTACTCCACACTaGGCACATTTGAGCGTCAGA +
Preference number: 5 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAETTPH*AHLSVR
Trigger: TCTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACCATTTCCAGGCAATGTaGAGTAGCTTAGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHHFQAM*SSLALQ
Trigger: CTGAAGGGCTAAGCTACTCAACATTGCCTGGAAATG...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCCAGGCCTGTGGGCTGTaGAATGATGACTTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAQACGL*NDDFGN
Trigger: ATTTCCAAAGTCATCATTCAACAGCCCACAGGCCTG...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACCCCATGGATTCTTGTTaGGTGCTGGGTTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHPMDSC*VLGFPY
Trigger: GTATGGAAAACCCAGCACCAAACAAGAATCCATGGG...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGTGTCCCATGGATTCTaGTTTGGTGCTGGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKVSHGF*FGAGFS
Trigger: GGAAAACCCAGCACCAAACAAGAATCCATGGGACAC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 90 bp TTCTTGCCCAGTCTACCATTCCTTTCCGGCCTTTCATGGGGAAGTTaGTGTCGGTTAGAACAGATGCAGCAGGGAGCTTCTGAATGCTCG +
Preference number: 5 (lower is better)
Translates to: FLPSLPFLSGLSWGS*CRLEQMQQGASECS
Trigger: CGAGCATTCAGAAGCTCCCTGCTGCATCTGTTCTAACCGACATCAACTTCCCCATGAAAGGCCGGAAAGGAATGGTAGACTGGGCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTGGCTCGGGCTCACCTaGTTCAGTACCAAAAACTCA +
Preference number: 5 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSWLGLT*FSTKNS
Trigger: TGAGTTTTTGGTACTGAACAAGGTGAGCCCGAGCCA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCATGGCTCGGGCTCACCTaGTTCAGTACCAAAAACTCA +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSWLGLT*FSTKNS
Trigger: TGAGTTTTTGGTACTGAACAAGGTGAGCCCGAGCCA...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGTCAGATTGCAGACTaGAGTAGTTTGCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSGQIAD*SSLQLL
Trigger: CAGGAGCTGCAAACTACTCAAGTCTGCAATCTGACC...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCACATTGGATATGCATCTaGCAAAGCTCGGCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSHWICI*QSSAVP
Trigger: GGGAACAGCCGAGCTTTGCAAGATGCATATCCAATG...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACCCTTTCATGGGGAAGTaGATGTCGGTTAGAACAGAT +
Preference number: 5 (lower is better)
Translates to: GYLQHGVVRTVHLAVSLHPFMGK*MSVRTD
Trigger: ATCTGTTCTAACCGACATCAACTTCCCCATGAAAGG...GTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGACTATTTCTCTAGGTaGCTGAGCCAAAATGGCGAA +
Preference number: 5 (lower is better)
Translates to: LTTRGGENCTLGRLSPLADYFSR*LSQNGE
Trigger: TTCGCCATTTTGGCTCAGCAACCTAGAGAAATAGTC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGGTGTTCCTGTTATGGTaGCTGCGCGGCAGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVVFLLW*LRGRGR
Trigger: TCGGCCCCTGCCGCGCAGCAACCATAACAGGAACAC...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTTAGCCCTTCAGGGTTaGTTCCCTTTTCTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: LTTRGGENCTLGRLSPLALALQG*FPFLPH
Trigger: ATGAGGAAGAAAAGGGAACAAACCCTGAAGGGCTAA...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTCCATCATTCGTTCTaGGGGGTGGACAATGTCCAT +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKFHHSF*GVDNVH
Trigger: ATGGACATTGTCCACCCCCAAGAACGAATGATGGAA...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCGGTTTTCCATACTGCTaGTGTTTGGTATGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: LTTRGGENCTLGRLSPLAGFPYC*CLVCPE
Trigger: TTCGGGACATACCAAACACAAGCAGTATGGAAAACC...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGCCCATGGATTCTTGTTaGGTGCTGGGTTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKPMDSC*VLGFPY
Trigger: GTATGGAAAACCCAGCACCAAACAAGAATCCATGGG...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCGTGTCCCATGGATTCTaGTTTGGTGCTGGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFVSHGF*FGAGFS
Trigger: GGAAAACCCAGCACCAAACAAGAATCCATGGGACAC...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTGCTCCAGAGTATCCTTaGCCTCCGTGTCTAAGACAT +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSAPEYP*PPCLRH
Trigger: ATGTCTTAGACACGGAGGCAAAGGATACTCTGGAGC...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCGCTCCAGAGTATCCTTaGCCTCCGTGTCTAAGACAT +
Preference number: 5 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLAPEYP*PPCLRH
Trigger: ATGTCTTAGACACGGAGGCAAAGGATACTCTGGAGC...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGCTCCAGAGTATCCTTaGCCTCCGTGTCTAAGACAT +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSAPEYP*PPCLRH
Trigger: ATGTCTTAGACACGGAGGCAAAGGATACTCTGGAGC...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 90 bp AGAGGGCAGTGTTATTGCAAACCCTTGATTCTCTTAATGGGCCGCTaGAGTGTGTCCCGTAAGGTGATACACAAGTTCTGGTTCGCACCT +
Preference number: 5 (lower is better)
Translates to: RGQCYCKPLILLMGR*SVSRKVIHKFWFAP
Trigger: AGGTGCGAACCAGAACTTGTGTATCACCTTACGGGACACACTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 90 bp CCATTAGAACATGTCACTGAGCAGTGGCTCCATGAACTCCATTCCTaGCACTGTCCGTCAACTGGACAGAGGGCAATATTACAAGGCTTG +
Preference number: 5 (lower is better)
Translates to: PLEHVTEQWLHELHS*HCPSTGQRAILQGL
Trigger: CAAGCCTTGTAATATTGCCCTCTGTCCAGTTGACGGACAGTGGCAGGAATGGAGTTCATGGAGCCACTGCTCAGTGACATGTTCTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGGAACACCAGAAGTCTaGGGCAGCATTAAATCCAAA +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKGTPEV*GSIKSK
Trigger: TTTGGATTTAATGCTGCCCAAGACTTCTGGTGTTCC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTATCCTGGGAAATCAGTaGGAAATACCCGGCGTATCT +
Preference number: 5 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSILGNQ*EIPGVS
Trigger: AGATACGCCGGGTATTTCCAACTGATTTCCCAGGAT...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTGCAGACTTGAGTAGTTaGCAGCTCCTGAGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFADLSS*QLLSQA
Trigger: TGCCTGACTCAGGAGCTGCAAACTACTCAAGTCTGC...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCATTCCAAATTCTTCTTaGGGTGGTCTCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLIPNSS*GGLLAS
Trigger: GGAGGCCAAGAGACCACCCAAAGAAGAATTTGGAAT...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCATTCCAAATTCTTCTTaGGGTGGTCTCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVIPNSS*GGLLAS
Trigger: GGAGGCCAAGAGACCACCCAAAGAAGAATTTGGAAT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTATTCCAAATTCTTCTTaGGGTGGTCTCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSIPNSS*GGLLAS
Trigger: GGAGGCCAAGAGACCACCCAAAGAAGAATTTGGAAT...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCTTTAGCAGCATCAGCTaGTTCCTGAGGGACCCTTTT +
Preference number: 5 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVFSSIS*FLRDPF
Trigger: AAAAGGGTCCCTCAGGAACAAGCTGATGCTGCTAAA...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTTTAGCAGCATCAGCTaGTTCCTGAGGGACCCTTTT +
Preference number: 5 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLFSSIS*FLRDPF
Trigger: AAAAGGGTCCCTCAGGAACAAGCTGATGCTGCTAAA...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGCAGAGGGCAGTGTTATaGCAAACCCTTGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKQRAVL*QTLDSL
Trigger: AAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTG...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGCCTTTCATGGGGAAGTaGATGTCGGTTAGAACAGAT +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKPFMGK*MSVRTD
Trigger: ATCTGTTCTAACCGACATCAACTTCCCCATGAAAGG...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGACTATTTCTCTAGGTaGCTGAGCCAAAATGGCGAA +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKDYFSR*LSQNGE
Trigger: TTCGCCATTTTGGCTCAGCAACCTAGAGAAATAGTC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCGAAACTACTCCACACTaGGCACATTTGAGCGTCAGA +
Preference number: 5 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLETTPH*AHLSVR
Trigger: TCTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTC...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCGAAACTACTCCACACTaGGCACATTTGAGCGTCAGA +
Preference number: 5 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVETTPH*AHLSVR
Trigger: TCTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTC...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCATTTCCAGGCAATGTaGAGTAGCTTAGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSHFQAM*SSLALQ
Trigger: CTGAAGGGCTAAGCTACTCAACATTGCCTGGAAATG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCATTTCCAGGCAATGTaGAGTAGCTTAGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRHFQAM*SSLALQ
Trigger: CTGAAGGGCTAAGCTACTCAACATTGCCTGGAAATG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCACAGGCCTGTGGGCTGTaGAATGATGACTTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSQACGL*NDDFGN
Trigger: ATTTCCAAAGTCATCATTCAACAGCCCACAGGCCTG...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGGCCTGTGGGCTGTaGAATGATGACTTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSQACGL*NDDFGN
Trigger: ATTTCCAAAGTCATCATTCAACAGCCCACAGGCCTG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCAGGCCTGTGGGCTGTaGAATGATGACTTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSQACGL*NDDFGN
Trigger: ATTTCCAAAGTCATCATTCAACAGCCCACAGGCCTG...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTTTCCATCATTCGTTCTaGGGGGTGGACAATGTCCAT +
Preference number: 5 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSFHHSF*GVDNVH
Trigger: ATGGACATTGTCCACCCCCAAGAACGAATGATGGAA...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTTCCATCATTCGTTCTaGGGGGTGGACAATGTCCAT +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSFHHSF*GVDNVH
Trigger: ATGGACATTGTCCACCCCCAAGAACGAATGATGGAA...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGTTCCATCATTCGTTCTaGGGGGTGGACAATGTCCAT +
Preference number: 5 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRFHHSF*GVDNVH
Trigger: ATGGACATTGTCCACCCCCAAGAACGAATGATGGAA...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTGCTCTCCTCTTTCATaGATGGCTGGGTGCTTACAG +
Preference number: 5 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSCSPLS*MAGCLQ
Trigger: CTGTAAGCACCCAGCCATCAATGAAAGAGGAGAGCA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGGGTTTTCCATACTGCTaGTGTTTGGTATGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKGFPYC*CLVCPE
Trigger: TTCGGGACATACCAAACACAAGCAGTATGGAAAACC...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCCCATGGATTCTTGTTaGGTGCTGGGTTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRPMDSC*VLGFPY
Trigger: GTATGGAAAACCCAGCACCAAACAAGAATCCATGGG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCCATGGATTCTTGTTaGGTGCTGGGTTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFPMDSC*VLGFPY
Trigger: GTATGGAAAACCCAGCACCAAACAAGAATCCATGGG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTGTCCCATGGATTCTaGTTTGGTGCTGGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSVSHGF*FGAGFS
Trigger: GGAAAACCCAGCACCAAACAAGAATCCATGGGACAC...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCGCTCCAGAGTATCCTTaGCCTCCGTGTCTAAGACAT +
Preference number: 5 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGAPEYP*PPCLRH
Trigger: ATGTCTTAGACACGGAGGCAAAGGATACTCTGGAGC...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTTACAACACGGGGTGGTGAGAACTGTACACTTGGCCGTCTCTCTCCACTAGCCTTGAAAATCACCCTCTaGCACATCCAGAGGCAAATT +
Preference number: 5 (lower is better)
Translates to: LTTRGGENCTLGRLSPLALKITL*HIQRQI
Trigger: AATTTGCCTCTGGATGTGCAAGAGGGTGATTTTCAA...GGCTAGTGGAGAGAGACGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 90 bp TGCAGGAACGCGGTGGTGGTCGTGCAGATGCTCTTATTGTGTGTCTaGGTCTGTCCAACCAGTATGAGGATATTGGATGAGATGATAGAC +
Preference number: 5 (lower is better)
Translates to: CRNAVVVVQMLLLCV*VCPTSMRILDEMID
Trigger: GTCTATCATCTCATCCAATATCCTCATACTGGTTGGACAGACTCAGACACACAATAAGAGCATCTGCACGACCACCACCGCGTTCCTGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 90 bp CTTATAAGCCGGGTCCTGATTTTTCCTGTCACAGCCATATACGACTaGCACGCCTCTGTCAAGACCCAACAGAATGAAGCCAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: LISRVLIFPVTAIYD*HASVKTQQNEARKK
Trigger: TTTCTTCCTGGCTTCATTCTGTTGGGTCTTGACAGAGGCGTGGCAGTCGTATATGGCTGTGACAGGAAAAATCAGGACCCGGCTTATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 90 bp CTTCCTCATCATCATTTAGAGAAATCCTGGAGAGTGTTCCTGTTATaGTTGCTGCGCGGCAGGGGCCGATATCCTTATGAAGCACTGATC +
Preference number: 5 (lower is better)
Translates to: LPHHHLEKSWRVFLL*LLRGRGRYPYEALI
Trigger: GATCAGTGCTTCATAAGGATATCGGCCCCTGCCGCGCAGCAACCATAACAGGAACACTCTCCAGGATTTCTCTAAATGATGATGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTATCCTGGGAAATCAGTaGGAAATACCCGGCGTATCT +
Preference number: 5 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSILGNQ*EIPGVS
Trigger: AGATACGCCGGGTATTTCCAACTGATTTCCCAGGAT...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGATCTTTGGGTGGTCTCTaGGCCTCCCTGGTCAGATTG +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRSLGGL*ASLVRL
Trigger: CAATCTGACCAGGGAGGCCAAGAGACCACCCAAAGA...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTGTTATTGCAAACCCTaGATTCTCTTAATGGGCCGC +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSCYCKP*ILLMGR
Trigger: GCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACA...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTGTTATTGCAAACCCTaGATTCTCTTAATGGGCCGC +
Preference number: 5 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFCYCKP*ILLMGR
Trigger: GCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCAGAGGGCAGTGTTATaGCAAACCCTTGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFQRAVL*QTLDSL
Trigger: AAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGAGGGCAGTGTTATaGCAAACCCTTGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSQRAVL*QTLDSL
Trigger: AAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAAATCCAATAGTGTCTaGGTGACCTGGGACATTCCA +
Preference number: 5 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVKSNSV*VTWDIP
Trigger: TGGAATGTCCCAGGTCACCAAGACACTATTGGATTT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCGACTATTTCTCTAGGTaGCTGAGCCAAAATGGCGAA +
Preference number: 5 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVDYFSR*LSQNGE
Trigger: TTCGCCATTTTGGCTCAGCAACCTAGAGAAATAGTC...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGACCAGTATGAGGATATaGGATGAGATGATAGACAGG +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKTSMRI*DEMIDR
Trigger: CCTGTCTATCATCTCATCCAATATCCTCATACTGGT...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCATTAGCCCTTCAGGGTTaGTTCCCTTTTCTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSLALQG*FPFLPH
Trigger: ATGAGGAAGAAAAGGGAACAAACCCTGAAGGGCTAA...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTTAGCCCTTCAGGGTTaGTTCCCTTTTCTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSLALQG*FPFLPH
Trigger: ATGAGGAAGAAAAGGGAACAAACCCTGAAGGGCTAA...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTTGCTCTCCTCTTTCATaGATGGCTGGGTGCTTACAG +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFCSPLS*MAGCLQ
Trigger: CTGTAAGCACCCAGCCATCAATGAAAGAGGAGAGCA...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCATACTGCTTGTGTTaGGTATGTCCCGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSPYCLC*VCPEIC
Trigger: ACAGATTTCGGGACATACCAAACACAAGCAGTATGG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCCATACTGCTTGTGTTaGGTATGTCCCGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSPYCLC*VCPEIC
Trigger: ACAGATTTCGGGACATACCAAACACAAGCAGTATGG...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCACCATACTGCTTGTGTTaGGTATGTCCCGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSPYCLC*VCPEIC
Trigger: ACAGATTTCGGGACATACCAAACACAAGCAGTATGG...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTGTGTCCCATGGATTCTaGTTTGGTGCTGGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFVSHGF*FGAGFS
Trigger: GGAAAACCCAGCACCAAACAAGAATCCATGGGACAC...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTGCTCCAGAGTATCCTTaGCCTCCGTGTCTAAGACAT +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFAPEYP*PPCLRH
Trigger: ATGTCTTAGACACGGAGGCAAAGGATACTCTGGAGC...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 90 bp ACTCGGTTCTCCCATTTTCGGATTTTAAGCAGCTTTCCAACCAAGTaGATAAGACATGGCAACCAAACTGGCTCGGGCTCACCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: TRFSHFRILSSFPTK*IRHGNQTGSGSPCS
Trigger: TGAACAAGGTGAGCCCGAGCCAGTTTGGTTGCCATGTCTTATGCACTTGGTTGGAAAGCTGCTTAAAATCCGAAAATGGGAGAACCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS CCA 90 bp AAGCATTTCGTATGGGATGCATCGGTAAGCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAAGACTCGTTCGATTTTGAGTCATCC +
Preference number: 5 (lower is better)
Translates to: KHFVWDASVSTVLHP*VDHVPKDSFDFESS
Trigger: GGATGACTCAAAATCGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATACGAAATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCGGAACACCAGAAGTCTaGGGCAGCATTAAATCCAAA +
Preference number: 5 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGGTPEV*GSIKSK
Trigger: TTTGGATTTAATGCTGCCCAAGACTTCTGGTGTTCC...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTATTCCAAATTCTTCTTaGGGTGGTCTCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFIPNSS*GGLLAS
Trigger: GGAGGCCAAGAGACCACCCAAAGAAGAATTTGGAAT...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGACCAGATTCACCAGTTaGTGCCATAAATTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRTRFTS*CHKFSS
Trigger: GCTGCTAAATTTATGGCACAAACTGGTGAATCTGGT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCACCAGATTCACCAGTTaGTGCCATAAATTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVTRFTS*CHKFSS
Trigger: GCTGCTAAATTTATGGCACAAACTGGTGAATCTGGT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTACCAGATTCACCAGTTaGTGCCATAAATTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSTRFTS*CHKFSS
Trigger: GCTGCTAAATTTATGGCACAAACTGGTGAATCTGGT...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAACCAGATTCACCAGTTaGTGCCATAAATTTAGCAGC +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSTRFTS*CHKFSS
Trigger: GCTGCTAAATTTATGGCACAAACTGGTGAATCTGGT...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCAAATCCAATAGTGTCTaGGTGACCTGGGACATTCCA +
Preference number: 5 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGKSNSV*VTWDIP
Trigger: TGGAATGTCCCAGGTCACCAAGACACTATTGGATTT...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCCTGCATTAACTCTATaGAGCCTGGGTAAATCTGTT +
Preference number: 5 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRPALTL*SLGKSV
Trigger: AACAGATTTACCCAGGCTCAATAGAGTTAATGCAGG...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCTGCATTAACTCTATaGAGCCTGGGTAAATCTGTT +
Preference number: 5 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFPALTL*SLGKSV
Trigger: AACAGATTTACCCAGGCTCAATAGAGTTAATGCAGG...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCCTGCATTAACTCTATaGAGCCTGGGTAAATCTGTT +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSPALTL*SLGKSV
Trigger: AACAGATTTACCCAGGCTCAATAGAGTTAATGCAGG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGATTAGGTCTAAGTTTTaGTATAGGACCGCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKIRSKF*YRTAPR
Trigger: TCTTGGAGCGGTCCTATACAAAAACTTAGACCTAAT...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGACCAGTATGAGGATATaGGATGAGATGATAGACAGG +
Preference number: 5 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRTSMRI*DEMIDR
Trigger: CCTGTCTATCATCTCATCCAATATCCTCATACTGGT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTCATTTCCAGGCAATGTaGAGTAGCTTAGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFHFQAM*SSLALQ
Trigger: CTGAAGGGCTAAGCTACTCAACATTGCCTGGAAATG...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTTTCCATCATTCGTTCTaGGGGGTGGACAATGTCCAT +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFFHHSF*GVDNVH
Trigger: ATGGACATTGTCCACCCCCAAGAACGAATGATGGAA...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGATCCAGTTTCACTTCTaGACAGTCCCACATTATCAT +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKIQFHF*TVPHYH
Trigger: ATGATAATGTGGGACTGTCAAGAAGTGAAACTGGAT...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCTTGAAAATCACCCTCTaGCACATCCAGAGGCAAATT +
Preference number: 5 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFLKITL*HIQRQI
Trigger: AATTTGCCTCTGGATGTGCAAGAGGGTGATTTTCAA...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 90 bp AGACACGGGAGTGAAAATGCTTTTTGGAATCACAACGCGATCTTCTaGATTTCTTGCCCAGTCTACCATTCCTTTCCGGCCTTTCATGGG +
Preference number: 5 (lower is better)
Translates to: RHGSENAFWNHNAIF*ISCPVYHSFPAFHG
Trigger: CCCATGAAAGGCCGGAAAGGAATGGTAGACTGGGCAAGAAATTCAGAAGATCGCGTTGTGATTCCAAAAAGCATTTTCACTCCCGTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTTGGAACTGCAAAGTaGCATTATGGAATGGTTCTT +
Preference number: 5 (lower is better)
Translates to: VLTEESHTVQVEMSGFPSLGTAK*HYGMVL
Trigger: AAGAACCATTCCATAATGCAACTTTGCAGTTCCAAG...ACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCCTTGGAACTGCAAAGTaGCATTATGGAATGGTTCTT +
Preference number: 5 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVLGTAK*HYGMVL
Trigger: AAGAACCATTCCATAATGCAACTTTGCAGTTCCAAG...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCTTGGAACTGCAAAGTaGCATTATGGAATGGTTCTT +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSLGTAK*HYGMVL
Trigger: AAGAACCATTCCATAATGCAACTTTGCAGTTCCAAG...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACATTGGATATGCATCTaGCAAAGCTCGGCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRHWICI*QSSAVP
Trigger: GGGAACAGCCGAGCTTTGCAAGATGCATATCCAATG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAAGTGTCTGTACTCATaGGATATGCATCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLKCLYS*DMHLAK
Trigger: CTTTGCAAGATGCATATCCAATGAGTACAGACACTT...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAAGTGTCTGTACTCATaGGATATGCATCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVKCLYS*DMHLAK
Trigger: CTTTGCAAGATGCATATCCAATGAGTACAGACACTT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTAAATCCAATAGTGTCTaGGTGACCTGGGACATTCCA +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFKSNSV*VTWDIP
Trigger: TGGAATGTCCCAGGTCACCAAGACACTATTGGATTT...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAATTAGGTCTAAGTTTTaGTATAGGACCGCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSIRSKF*YRTAPR
Trigger: TCTTGGAGCGGTCCTATACAAAAACTTAGACCTAAT...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCGCATCTAAATGCATCTaGAACCTCTCTCCGAAGAAT +
Preference number: 5 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGASKCI*NLSPKN
Trigger: ATTCTTCGGAGAGAGGTTCAAGATGCATTTAGATGC...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGAAAGTCTGTCATGATTaGAGCATGTCCATTAGGAAA +
Preference number: 5 (lower is better)
Translates to: GPDRGKSHCPGGNVRLPKKVCHD*SMSIRK
Trigger: TTTCCTAATGGACATGCTCAAATCATGACAGACTTT...CTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCATCCAGTTTCACTTCTaGACAGTCCCACATTATCAT +
Preference number: 5 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFIQFHF*TVPHYH
Trigger: ATGATAATGTGGGACTGTCAAGAAGTGAAACTGGAT...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCATCCAGTTTCACTTCTaGACAGTCCCACATTATCAT +
Preference number: 5 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLIQFHF*TVPHYH
Trigger: ATGATAATGTGGGACTGTCAAGAAGTGAAACTGGAT...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GGCACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAATCCAGTTTCACTTCTaGACAGTCCCACATTATCAT +
Preference number: 5 (lower is better)
Translates to: GTRRVLTEESHTVQVEMSIQFHF*TVPHYH
Trigger: ATGATAATGTGGGACTGTCAAGAAGTGAAACTGGAT...TGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACAAGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGATCCAGTTTCACTTCTaGACAGTCCCACATTATCAT +
Preference number: 5 (lower is better)
Translates to: HKKGPDRGKSHCPGGNVRIQFHF*TVPHYH
Trigger: ATGATAATGTGGGACTGTCAAGAAGTGAAACTGGAT...CCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTGGTTTTCCATACTGCTaGTGTTTGGTATGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFGFPYC*CLVCPE
Trigger: TTCGGGACATACCAAACACAAGCAGTATGGAAAACC...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTTTGAAAATCACCCTCTaGCACATCCAGAGGCAAATT +
Preference number: 5 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSLKITL*HIQRQI
Trigger: AATTTGCCTCTGGATGTGCAAGAGGGTGATTTTCAA...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTATTAGGTCTAAGTTTTaGTATAGGACCGCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: ESHTVQVEMSGFPSLSVSIRSKF*YRTAPR
Trigger: TCTTGGAGCGGTCCTATACAAAAACTTAGACCTAAT...ACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGAAACTACTCCACACTaGGCACATTTGAGCGTCAGA +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRETTPH*AHLSVR
Trigger: TCTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAAAGTCTGTCATGATTaGAGCATGTCCATTAGGAAA +
Preference number: 5 (lower is better)
Translates to: LTEESHTVQVEMSGFPSLKVCHD*SMSIRK
Trigger: TTTCCTAATGGACATGCTCAAATCATGACAGACTTT...GAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGTGCTCTCCTCTTTCATaGATGGCTGGGTGCTTACAG +
Preference number: 5 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVCSPLS*MAGCLQ
Trigger: CTGTAAGCACCCAGCCATCAATGAAAGAGGAGAGCA...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AGAAGGGTCCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCAACTCATTGATATCGTaGATCCAGTTTCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: RRVLTEESHTVQVEMSGFNSLIS*IQFHFL
Trigger: CAAGAAGTGAAACTGGATCAACGATATCAATGAGTT...GAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp GAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAACTCATTGATATCGTaGATCCAGTTTCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: EESHTVQVEMSGFPSLSVNSLIS*IQFHFL
Trigger: CAAGAAGTGAAACTGGATCAACGATATCAATGAGTT...GACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CCTGACAGAGGAAAGTCACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTAACTCATTGATATCGTaGATCCAGTTTCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: PDRGKSHCPGGNVRLPKSNSLIS*IQFHFL
Trigger: CAAGAAGTGAAACTGGATCAACGATATCAATGAGTT...AGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 90 bp TTTCACTTCTTGACAGTCCCACATTATCATCCAACTCAGAGGCCATaGAATTCTTCACAGCTGTGCGAGGCTCAAAGGGTAAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: FHFLTVPHYHPTQRP*NSSQLCEAQRVNSA
Trigger: TGCAGAATTTACCCTTTGAGCCTCGCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGGATGATAATGTGGGACTGTCAAGAAGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 90 bp GGTTTACTTTGTAGTGTAATAGCCTTTCATGCGGCAAGGTTTCCATaGCAATATTCATCTTGCTCTCCTCTTTCATTGATGGCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: GLLCSVIAFHAARFP*QYSSCSPLSLMAGC
Trigger: GCACCCAGCCATCAATGAAAGAGGAGAGCAAGATGAATATTGGCATGGAAACCTTGCCGCATGAAAGGCTATTACACTACAAAGTAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGGAACACCAGAAGTCTaGGGCAGCATTAAATCCAAA +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRGTPEV*GSIKSK
Trigger: TTTGGATTTAATGCTGCCCAAGACTTCTGGTGTTCC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAAAATCCAATAGTGTCTaGGTGACCTGGGACATTCCA +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRKSNSV*VTWDIP
Trigger: TGGAATGTCCCAGGTCACCAAGACACTATTGGATTT...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTATTAGGTCTAAGTTTTaGTATAGGACCGCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFIRSKF*YRTAPR
Trigger: TCTTGGAGCGGTCCTATACAAAAACTTAGACCTAAT...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAACTGTACACTTGGCAAAGTCTGTCATGATTaGAGCATGTCCATTAGGAAA +
Preference number: 5 (lower is better)
Translates to: KSIPRVLTTRGGENCTLGKVCHD*SMSIRK
Trigger: TTTCCTAATGGACATGCTCAAATCATGACAGACTTT...GCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCATTTCCAGGCAATGTaGAGTAGCTTAGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVHFQAM*SSLALQ
Trigger: CTGAAGGGCTAAGCTACTCAACATTGCCTGGAAATG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGACCATACTGCTTGTGTTaGGTATGTCCCGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRPYCLC*VCPEIC
Trigger: ACAGATTTCGGGACATACCAAACACAAGCAGTATGG...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGGTTTTCCATACTGCTaGTGTTTGGTATGTCCCGAA +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRGFPYC*CLVCPE
Trigger: TTCGGGACATACCAAACACAAGCAGTATGGAAAACC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCCCATGGATTCTTGTTaGGTGCTGGGTTTTCCATAC +
Preference number: 5 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVPMDSC*VLGFPY
Trigger: GTATGGAAAACCCAGCACCAAACAAGAATCCATGGG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 90 bp TATTTGAAAGAAGTTCTGGACCCCATCAGACGCAGGGATGTAACTTaGCCTTTTAAACGTGTCTGTCACATTTCTCAGGATTTCCACAGA +
Preference number: 5 (lower is better)
Translates to: YLKEVLDPIRRRDVT*PFKRVCHISQDFHR
Trigger: TCTGTGGAAATCCTGAGAAATGTGACAGACACGTTTAAAAGGGCAAGTTACATCCCTGCGTCTGATGGGGTCCAGAACTTCTTTCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTAAATGCTATATTTGGTaGGATCTGGATTTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFKCYIW*DLDFPV
Trigger: CACTGGAAAATCCAGATCCAACCAAATATAGCATTT...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACATCCTGGGAAATCAGTaGGAAATACCCGGCGTATCT +
Preference number: 5 (lower is better)
Translates to: YFIHSCSRESYSEPSRENILGNQ*EIPGVS
Trigger: AGATACGCCGGGTATTTCCAACTGATTTCCCAGGAT...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCAGAGGGCAGTGTTATaGCAAACCCTTGATTCTCTT +
Preference number: 5 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVQRAVL*QTLDSL
Trigger: AAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAAAGGTTGCTAACTATTaGAAAGAAGTTCTGGACCCC +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRKVANY*KEVLDP
Trigger: GGGGTCCAGAACTTCTTTCAAATAGTTAGCAACCTT...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGCCTTTCATGGGGAAGTaGATGTCGGTTAGAACAGAT +
Preference number: 5 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVPFMGK*MSVRTD
Trigger: ATCTGTTCTAACCGACATCAACTTCCCCATGAAAGG...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAGCATCTAAATGCATCTaGAACCTCTCTCCGAAGAAT +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRASKCI*NLSPKN
Trigger: ATTCTTCGGAGAGAGGTTCAAGATGCATTTAGATGC...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp CACACTGTCCAGGTGGAAATGTCAGGCTTCCCAAGTCTCAGTGTCAGTGTATTTAACTCATTGATATCGTaGATCCAGTTTCACTTCTTG +
Preference number: 5 (lower is better)
Translates to: HTVQVEMSGFPSLSVSVFNSLIS*IQFHFL
Trigger: CAAGAAGTGAAACTGGATCAACGATATCAATGAGTT...AAATACACTGACACTGAGACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGATTGAAAATCACCCTCTaGCACATCCAGAGGCAAATT +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRLKITL*HIQRQI
Trigger: AATTTGCCTCTGGATGTGCAAGAGGGTGATTTTCAA...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACTGTTATTGCAAACCCTaGATTCTCTTAATGGGCCGC +
Preference number: 5 (lower is better)
Translates to: YFIHSCSRESYSEPSRENCYCKP*ILLMGR
Trigger: GCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACA...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAAAGTGTCTGTACTCATaGGATATGCATCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRKCLYS*DMHLAK
Trigger: CTTTGCAAGATGCATATCCAATGAGTACAGACACTT...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACCCTTTCATGGGGAAGTaGATGTCGGTTAGAACAGAT +
Preference number: 5 (lower is better)
Translates to: YFIHSCSRESYSEPSRENPFMGK*MSVRTD
Trigger: ATCTGTTCTAACCGACATCAACTTCCCCATGAAAGG...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGACCAGTATGAGGATATaGGATGAGATGATAGACAGG +
Preference number: 5 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVTSMRI*DEMIDR
Trigger: CCTGTCTATCATCTCATCCAATATCCTCATACTGGT...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGGCATCTAAATGCATCTaGAACCTCTCTCCGAAGAAT +
Preference number: 5 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVASKCI*NLSPKN
Trigger: ATTCTTCGGAGAGAGGTTCAAGATGCATTTAGATGC...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACTTAGCCCTTCAGGGTTaGTTCCCTTTTCTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: YFIHSCSRESYSEPSRENLALQG*FPFLPH
Trigger: ATGAGGAAGAAAAGGGAACAAACCCTGAAGGGCTAA...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACAAGGTTGCTAACTATTaGAAAGAAGTTCTGGACCCC +
Preference number: 5 (lower is better)
Translates to: YFIHSCSRESYSEPSRENKVANY*KEVLDP
Trigger: GGGGTCCAGAACTTCTTTCAAATAGTTAGCAACCTT...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp AAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAGAAAAGTCTGTCATGATTaGAGCATGTCCATTAGGAAA +
Preference number: 5 (lower is better)
Translates to: KDYLTNPFHGYLQHGVVRKVCHD*SMSIRK
Trigger: TTTCCTAATGGACATGCTCAAATCATGACAGACTTT...TCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 90 bp TCATCCCATAACACGCAATATGGATTCAAAGTGCCATTTGCCAAGTaGGCTAGCTCTATCTCCAAAAATGAGTCAGTTGTTTTAGGTTCA +
Preference number: 5 (lower is better)
Translates to: SSHNTQYGFKVPFAK*ASSISKNESVVLGS
Trigger: TGAACCTAAAACAACTGACTCATTTTTGGAGATAGAGCTAGCTCACTTGGCAAATGGCACTTTGAATCCATATTGCGTGTTATGGGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 90 bp ACTATCACAAAGCCTTGTAATGAATCAAACACGGCAAAAAGTATCTaGAACAATATGGAGCGTTTATCTGTCATGGCCAGAACTGCAGAC +
Preference number: 5 (lower is better)
Translates to: TITKPCNESNTAKSI*NNMERLSVMARTAD
Trigger: GTCTGCAGTTCTGGCCATGACAGATAAACGCTCCATATTGTTTCAGATACTTTTTGCCGTGTTTGATTCATTACAAGGCTTTGTGATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATAAAGATTACCTTACAAATCCATTCCACGGGTACTTACAACACGGGGTGGTGAAATGCTATATTTGGTaGGATCTGGATTTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: YKDYLTNPFHGYLQHGVVKCYIW*DLDFPV
Trigger: CACTGGAAAATCCAGATCCAACCAAATATAGCATTT...CACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATCTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACAAGTGTCTGTACTCATaGGATATGCATCTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: YFIHSCSRESYSEPSRENKCLYS*DMHLAK
Trigger: CTTTGCAAGATGCATATCCAATGAGTACAGACACTT...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS-3UTR CAA 90 bp TATTTTATACACAGCTGCAGCAGAGAAAGCTACTCAGAGCCTTCTAGAGAAAACAAAGTCTGTCATGATTaGAGCATGTCCATTAGGAAA +
Preference number: 5 (lower is better)
Translates to: YFIHSCSRESYSEPSRENKVCHD*SMSIRK
Trigger: TTTCCTAATGGACATGCTCAAATCATGACAGACTTT...GTTTTCTCTAGAAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp GGGTGGTCTCTTGGCCTCCCTGGTCAGATTGCAGACTTGAGTAGTTaGCAGCTCCTGAGTCAGGCAACCCTCCGTCTGCTCATTCAGGGG +
Preference number: 6 (lower is better)
Translates to: GWSLGLPGQIADLSS*QLLSQATLRLLIQG
Trigger: CCCCTGAATGAGCAGACGGAGGGTTGCCTGACTCAGGAGCTGCAAACTACTCAAGTCTGCAATCTGACCAGGGAGGCCAAGAGACCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp TCTGGTTCGCACCTGCGACCCTTGACCACAAGTAACTaGGCATGCGCTCCACTGGGACCACTCTTCCACACC +
Preference number: 6 (lower is better)
Translates to: SGSHLRPLTTSN*ACAPLGPLFHT
Trigger: GGTGTGGAAGAGTGGTCCCAGTGGAGCGCATGCTCAGTTACTTGTGGTCAAGGGTCGCAGGTGCGAACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp GTGCCTTCACACTGCTGTCCTGTTACAGCTGCGCCCTaGCAAGTCCTCATTCTCCTCTCCCAGCCACCATCA +
Preference number: 6 (lower is better)
Translates to: VPSHCCPVTAAP*QVLILLSQPPS
Trigger: TGATGGTGGCTGGGAGAGGAGAATGAGGACTTGTCAGGGCGCAGCTGTAACAGGACAGCAGTGTGAAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp TTCACCTGTGCCTTCACACTGCTGTCCTGTTACAGCTaGGCCCTGACAAGTCCTCATTCTCCTCTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: FTCAFTLLSCYS*ALTSPHSPLPA
Trigger: GGCTGGGAGAGGAGAATGAGGACTTGTCAGGGCGCAGCTGTAACAGGACAGCAGTGTGAAGGCACAGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp ACCGCTGCTCACTGCATCTTCGTACCTCTTCACCTGTaGCTTCACACTGCTGTCCTGTTACAGCTGCGCCCT +
Preference number: 6 (lower is better)
Translates to: TAAHCIFVPLHL*LHTAVLLQLRP
Trigger: AGGGCGCAGCTGTAACAGGACAGCAGTGTGAAGGCACAGGTGAAGAGGTACGAAGATGCAGTGAGCAGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp GGTGATACACAAGTTCTGGTTCGCACCTGCGACCCTTaGCCACAAGTAACTGAGCATGCGCTCCACTGGGAC +
Preference number: 6 (lower is better)
Translates to: GDTQVLVRTCDP*PQVTEHALHWD
Trigger: GTCCCAGTGGAGCGCATGCTCAGTTACTTGTGGTCAAGGGTCGCAGGTGCGAACCAGAACTTGTGTATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp TTCTTCTTTGGGTGGTCTCTTGGCCTCCCTGGTCAGATTGCAGACTaGAGTAGTTTGCAGCTCCTGAGTCAGGCAACCCTCCGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: FFFGWSLGLPGQIAD*SSLQLLSQATLRLL
Trigger: GAGCAGACGGAGGGTTGCCTGACTCAGGAGCTGCAAACTACTCAAGTCTGCAATCTGACCAGGGAGGCCAAGAGACCACCCAAAGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp CGTCTGCTAGTGGTGCCTGTGGCATTCAGTGGACATTaGTTGAATGCCAGGTCGCCTGCAGGAGTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: RLLVVPVAFSGH*LNARSPAGVLF
Trigger: GAAAAGGACTCCTGCAGGCGACCTGGCATTCAATCAATGTCCACTGAATGCCACAGGCACCACTAGCAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp CCAAAGAGAGGCCATGGCGTTACTGGCGGTGGTGGCTaGCAAAGCTGTTGTAGAAACTACTCCACACTTGGC +
Preference number: 6 (lower is better)
Translates to: PKRGHGVTGGGG*QSCCRNYSTLG
Trigger: GCCAAGTGTGGAGTAGTTTCTACAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCATGGCCTCTCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS CAA 72 bp GCGTCTGCTAGTGGTGCCTGTGGCATTCAGTGGACATaGATTGAATGCCAGGTCGCCTGCAGGAGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: ASASGACGIQWT*IECQVACRSPF
Trigger: AAAAGGACTCCTGCAGGCGACCTGGCATTCAATCAATGTCCACTGAATGCCACAGGCACCACTAGCAGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp GTTATGGTTGCTGCGCGGCAGGGGCCGATATCCTTATaGAGCACTGATCGGCAAGCAATGTCTACGTCCTTT +
Preference number: 6 (lower is better)
Translates to: VMVAARQGPISL*STDRQAMSTSF
Trigger: AAAGGACGTAGACATTGCTTGCCGATCAGTGCTTCATAAGGATATCGGCCCCTGCCGCGCAGCAACCATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp GGCATATTTCATAAGGTGCTGGGCACCGCTGCTCACTaGATCTTCGTACCTCTTCACCTGTGCCTTCACACT +
Preference number: 6 (lower is better)
Translates to: GIFHKVLGTAAH*IFVPLHLCLHT
Trigger: AGTGTGAAGGCACAGGTGAAGAGGTACGAAGATGCAGTGAGCAGCGGTGCCCAGCACCTTATGAAATATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp AGTGGTGCCTGTGGCATTCAGTGGACATTGATTGAATaGCAGGTCGCCTGCAGGAGTCCTTTTCCACACCAT +
Preference number: 6 (lower is better)
Translates to: SGACGIQWTLIE*QVACRSPFPHH
Trigger: ATGGTGTGGAAAAGGACTCCTGCAGGCGACCTGGCATTCAATCAATGTCCACTGAATGCCACAGGCACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp CGGGTCCTGATTTTTCCTGTCACAGCCATATACGACTaGCACGCCTCTGTCAAGACCCAACAGAATGAAGCC +
Preference number: 6 (lower is better)
Translates to: RVLIFPVTAIYD*HASVKTQQNEA
Trigger: GGCTTCATTCTGTTGGGTCTTGACAGAGGCGTGGCAGTCGTATATGGCTGTGACAGGAAAAATCAGGACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 72 bp AGGGGTAACACGACGTTATTTAACAGAACCAGGGACTaGTCATCTATTCCCCACTCTCCCAAGTGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: RGNTTLFNRTRD*SSIPHSPKCWG
Trigger: CCCCCAGCACTTGGGAGAGTGGGGAATAGATGACCAGTCCCTGGTTCTGTTAAATAACGTCGTGTTACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS CCA 72 bp CTCTGCTGTGTCCCATTAGAACATGTCACTGAGCAGTaGCTCCATGAACTCCATTCCTGCCACTGTCCGTCA +
Preference number: 6 (lower is better)
Translates to: LCCVPLEHVTEQ*LHELHSCHCPS
Trigger: TGACGGACAGTGGCAGGAATGGAGTTCATGGAGCCACTGCTCAGTGACATGTTCTAATGGGACACAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp TGGGGGTGGACAATGTCCATATCGGCCCCTCTCAGATaGTCATCCGTGCATAAGTACACAGTTCTCCGCAGT +
Preference number: 6 (lower is better)
Translates to: WGWTMSISAPLR*SSVHKYTVLRS
Trigger: ACTGCGGAGAACTGTGTACTTATGCACGGATGACAATCTGAGAGGGGCCGATATGGACATTGTCCACCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp CCTCATCATCATTTAGAGAAATCCTGGAGAGTGTTCCTGTTATGGTaGCTGCGCGGCAGGGGCCGATATCCTTATGAAGCACTGATCGGC +
Preference number: 6 (lower is better)
Translates to: PHHHLEKSWRVFLLW*LRGRGRYPYEALIG
Trigger: GCCGATCAGTGCTTCATAAGGATATCGGCCCCTGCCGCGCAGCAACCATAACAGGAACACTCTCCAGGATTTCTCTAAATGATGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp ATGCTGCAAGTGTCTGTACTCATTGGATATGCATCTTaGAAAGCTCGGCTGTTCCCAGGAGGCCACTCCATG +
Preference number: 6 (lower is better)
Translates to: MLQVSVLIGYAS*KARLFPGGHSM
Trigger: CATGGAGTGGCCTCCTGGGAACAGCCGAGCTTTGCAAGATGCATATCCAATGAGTACAGACACTTGCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp CATGTACTGGACAGAGGGCAGTGTTATTGCAAACCCTaGATTCTCTTAATGGGCCGCTGCAGTGTGTCCCGT +
Preference number: 6 (lower is better)
Translates to: HVLDRGQCYCKP*ILLMGRCSVSR
Trigger: ACGGGACACACTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTGTCCAGTACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp CAGTCTACCATTCCTTTCCGGCCTTTCATGGGGAAGTaGATGTCGGTTAGAACAGATGCAGCAGGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: QSTIPFRPFMGK*MSVRTDAAGSF
Trigger: GAAGCTCCCTGCTGCATCTGTTCTAACCGACATCAACTTCCCCATGAAAGGCCGGAAAGGAATGGTAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp CCCAAACTCCATGTACTGGACAGAGGGCAGTGTTATTGCAAACCCTaGATTCTCTTAATGGGCCGCTGCAGTGTGTCCCGTAAGGTGATA +
Preference number: 6 (lower is better)
Translates to: PKLHVLDRGQCYCKP*ILLMGRCSVSRKVI
Trigger: TATCACCTTACGGGACACACTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTGTCCAGTACATGGAGTTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp ATTCGTTCTTGGGGGTGGACAATGTCCATATCGGCCCCTCTCAGATaGTCATCCGTGCATAAGTACACAGTTCTCCGCAGTTCAGTGTTC +
Preference number: 6 (lower is better)
Translates to: IRSWGWTMSISAPLR*SSVHKYTVLRSSVF
Trigger: GAACACTGAACTGCGGAGAACTGTGTACTTATGCACGGATGACAATCTGAGAGGGGCCGATATGGACATTGTCCACCCCCAAGAACGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp AGTCTACCATTCCTTTCCGGCCTTTCATGGGGAAGTTaGTGTCGGTTAGAACAGATGCAGCAGGGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: SLPFLSGLSWGS*CRLEQMQQGAS
Trigger: AGAAGCTCCCTGCTGCATCTGTTCTAACCGACATCAACTTCCCCATGAAAGGCCGGAAAGGAATGGTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp GCGGTGGTGGTCGTGCAGATGCTCTTATTGTGTGTCTaGGTCTGTCCAACCAGTATGAGGATATTGGATGAG +
Preference number: 6 (lower is better)
Translates to: AVVVVQMLLLCV*VCPTSMRILDE
Trigger: CTCATCCAATATCCTCATACTGGTTGGACAGACTCAGACACACAATAAGAGCATCTGCACGACCACCACCGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp CCCAAACTCCATGTACTGGACAGAGGGCAGTGTTATTaGAAACCCTTGATTCTCTTAATGGGCCGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: PKLHVLDRGQCY*KPLILLMGRCS
Trigger: ACTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTGTCCAGTACATGGAGTTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp TCCCAAACTCCATGTACTGGACAGAGGGCAGTGTTATaGCAAACCCTTGATTCTCTTAATGGGCCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SQTPCTGQRAVL*QTLDSLNGPLQ
Trigger: CTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTGTCCAGTACATGGAGTTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp AATGCTGCAAGTGTCTGTACTCATTGGATATGCATCTaGCAAAGCTCGGCTGTTCCCAGGAGGCCACTCCAT +
Preference number: 6 (lower is better)
Translates to: NAASVCTHWICI*QSSAVPRRPLH
Trigger: ATGGAGTGGCCTCCTGGGAACAGCCGAGCTTTGCAAGATGCATATCCAATGAGTACAGACACTTGCAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp CATTTAGAGAAATCCTGGAGAGTGTTCCTGTTATGGTaGCTGCGCGGCAGGGGCCGATATCCTTATGAAGCA +
Preference number: 6 (lower is better)
Translates to: HLEKSWRVFLLW*LRGRGRYPYEA
Trigger: TGCTTCATAAGGATATCGGCCCCTGCCGCGCAGCAACCATAACAGGAACACTCTCCAGGATTTCTCTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp CACACCAGATTCACCAGTTTGTGCCATAAATTTAGCAGCATCAGCTaGTTCCTGAGGGACCCTTTTCTCATGGACAGATCGAGGTCGCTG +
Preference number: 6 (lower is better)
Translates to: HTRFTSLCHKFSSIS*FLRDPFLMDRSRSL
Trigger: CAGCGACCTCGATCTGTCCATGAGAAAAGGGTCCCTCAGGAACAAGCTGATGCTGCTAAATTTATGGCACAAACTGGTGAATCTGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp GTTTGTGCCATAAATTTAGCAGCATCAGCTTGTTCCTaGGGGACCCTTTTCTCATGGACAGATCGAGGTCGC +
Preference number: 6 (lower is better)
Translates to: VCAINLAASACS*GTLFSWTDRGR
Trigger: GCGACCTCGATCTGTCCATGAGAAAAGGGTCCCTCAGGAACAAGCTGATGCTGCTAAATTTATGGCACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp CAATGTCCATATCGGCCCCTCTCAGATTGTCATCCGTaGATAAGTACACAGTTCTCCGCAGTTCAGTGTTCT +
Preference number: 6 (lower is better)
Translates to: QCPYRPLSDCHP*ISTQFSAVQCS
Trigger: AGAACACTGAACTGCGGAGAACTGTGTACTTATGCACGGATGACAATCTGAGAGGGGCCGATATGGACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 72 bp GTATGGGATGCATCGGTAAGCACAGTTTTACATCCCTaGGTGGACCACGTTCCCAAAGACTCGTTCGATTTT +
Preference number: 6 (lower is better)
Translates to: VWDASVSTVLHP*VDHVPKDSFDF
Trigger: AAAATCGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 72 bp GCGAAGGTAGAGAGCCGATCACATAAGCATTTCGTATaGGATGCATCGGTAAGCACAGTTTTACATCCCTGG +
Preference number: 6 (lower is better)
Translates to: AKVESRSHKHFV*DASVSTVLHPW
Trigger: CCAGGGATGTAAAACTGTGCTTACCGATGCATCCCATACGAAATGCTTATGTGATCGGCTCTCTACCTTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 72 bp CATCATTTAGAGAAATCCTGGAGAGTGTTCCTGTTATaGTTGCTGCGCGGCAGGGGCCGATATCCTTATGAA +
Preference number: 6 (lower is better)
Translates to: HHLEKSWRVFLL*LLRGRGRYPYE
Trigger: TTCATAAGGATATCGGCCCCTGCCGCGCAGCAACCATAACAGGAACACTCTCCAGGATTTCTCTAAATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp AGGCATCACAATATAGTCACTTTCCATCATTCGTTCTaGGGGGTGGACAATGTCCATATCGGCCCCTCTCAG +
Preference number: 6 (lower is better)
Translates to: RHHNIVTFHHSF*GVDNVHIGPSQ
Trigger: CTGAGAGGGGCCGATATGGACATTGTCCACCCCCAAGAACGAATGATGGAAAGTGACTATATTGTGATGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp TTCGCAAGGTGCTCTTTAATTGAATGCTGCAAGTGTCTGTACTCATaGGATATGCATCTTGCAAAGCTCGGCTGTTCCCAGGAGGCCACT +
Preference number: 6 (lower is better)
Translates to: FARCSLIECCKCLYS*DMHLAKLGCSQEAT
Trigger: AGTGGCCTCCTGGGAACAGCCGAGCTTTGCAAGATGCATATCCAATGAGTACAGACACTTGCAGCATTCAATTAAAGAGCACCTTGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp TTGACAGTCCCACATTATCATCCAACTCAGAGGCCATaGAATTCTTCACAGCTGTGCGAGGCTCAAAGGGTA +
Preference number: 6 (lower is better)
Translates to: LTVPHYHPTQRP*NSSQLCEAQRV
Trigger: TACCCTTTGAGCCTCGCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGGATGATAATGTGGGACTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp TGTTATTGCAAACCCTTGATTCTCTTAATGGGCCGCTaGAGTGTGTCCCGTAAGGTGATACACAAGTTCTGG +
Preference number: 6 (lower is better)
Translates to: CYCKPLILLMGR*SVSRKVIHKFW
Trigger: CCAGAACTTGTGTATCACCTTACGGGACACACTGCAGCGGCCCATTAAGAGAATCAAGGGTTTGCAATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp GAAGTTCTGGACCCCATCAGACGCAGGGATGTAACTTaGCCTTTTAAACGTGTCTGTCACATTTCTCAGGAT +
Preference number: 6 (lower is better)
Translates to: EVLDPIRRRDVT*PFKRVCHISQD
Trigger: ATCCTGAGAAATGTGACAGACACGTTTAAAAGGGCAAGTTACATCCCTGCGTCTGATGGGGTCCAGAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 72 bp CTTTCCAACCAAGTGCATAAGACATGGCAACCAAACTaGCTCGGGCTCACCTTGTTCAGTACCAAAAACTCA +
Preference number: 6 (lower is better)
Translates to: LSNQVHKTWQPN*LGLTLFSTKNS
Trigger: TGAGTTTTTGGTACTGAACAAGGTGAGCCCGAGCCAGTTTGGTTGCCATGTCTTATGCACTTGGTTGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS CCA 72 bp TATAAGATAATCCTCTGGGCATATTTCATAAGGTGCTaGGCACCGCTGCTCACTGCATCTTCGTACCTCTTC +
Preference number: 6 (lower is better)
Translates to: YKIILWAYFIRC*APLLTASSYLF
Trigger: GAAGAGGTACGAAGATGCAGTGAGCAGCGGTGCCCAGCACCTTATGAAATATGCCCAGAGGATTATCTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp AGAACTTCTAGGCATCACAATATAGTCACTTTCCATCATTCGTTCTaGGGGGTGGACAATGTCCATATCGGCCCCTCTCAGATTGTCATC +
Preference number: 6 (lower is better)
Translates to: RTSRHHNIVTFHHSF*GVDNVHIGPSQIVI
Trigger: GATGACAATCTGAGAGGGGCCGATATGGACATTGTCCACCCCCAAGAACGAATGATGGAAAGTGACTATATTGTGATGCCTAGAAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp TTGATGTCGGTTAGAACAGATGCAGCAGGGAGCTTCTaGATGCTCGCCACTACATTTCCAGTCATTAGGTAT +
Preference number: 6 (lower is better)
Translates to: LMSVRTDAAGSF*MLATTFPVIRY
Trigger: ATACCTAATGACTGGAAATGTAGTGGCGAGCATTCAGAAGCTCCCTGCTGCATCTGTTCTAACCGACATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp TTCACCAGTTTGTGCCATAAATTTAGCAGCATCAGCTaGTTCCTGAGGGACCCTTTTCTCATGGACAGATCG +
Preference number: 6 (lower is better)
Translates to: FTSLCHKFSSIS*FLRDPFLMDRS
Trigger: CGATCTGTCCATGAGAAAAGGGTCCCTCAGGAACAAGCTGATGCTGCTAAATTTATGGCACAAACTGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp TGCTTTTTGGAATCACAACGCGATCTTCTGAATTTCTaGCCCAGTCTACCATTCCTTTCCGGCCTTTCATGG +
Preference number: 6 (lower is better)
Translates to: CFLESQRDLLNF*PSLPFLSGLSW
Trigger: CCATGAAAGGCCGGAAAGGAATGGTAGACTGGGCAAGAAATTCAGAAGATCGCGTTGTGATTCCAAAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp GTTCATACTCATAGGCATGTGCAGGCCTGTGGGCTGTaGAATGATGACTTTGGAAATGACATTTCCAGGCAA +
Preference number: 6 (lower is better)
Translates to: VHTHRHVQACGL*NDDFGNDISRQ
Trigger: TTGCCTGGAAATGTCATTTCCAAAGTCATCATTCAACAGCCCACAGGCCTGCACATGCCTATGAGTATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp CTTTCATGCGGCAAGGTTTCCATGCCAATATTCATCTaGCTCTCCTCTTTCATTGATGGCTGGGTGCTTACA +
Preference number: 6 (lower is better)
Translates to: LSCGKVSMPIFI*LSSFIDGWVLT
Trigger: TGTAAGCACCCAGCCATCAATGAAAGAGGAGAGCAAGATGAATATTGGCATGGAAACCTTGCCGCATGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp AGTGAAAATGCTTTTTGGAATCACAACGCGATCTTCTaGATTTCTTGCCCAGTCTACCATTCCTTTCCGGCC +
Preference number: 6 (lower is better)
Translates to: SENAFWNHNAIF*ISCPVYHSFPA
Trigger: GGCCGGAAAGGAATGGTAGACTGGGCAAGAAATTCAGAAGATCGCGTTGTGATTCCAAAAAGCATTTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp CATCTTGAACCTCTCTCCGAAGAATGCAGTGGACCATaGCTATCACAAAGCCTTGTAATGAATCAAACACGG +
Preference number: 6 (lower is better)
Translates to: HLEPLSEECSGP*LSQSLVMNQTR
Trigger: CCGTGTTTGATTCATTACAAGGCTTTGTGATAGTCATGGTCCACTGCATTCTTCGGAGAGAGGTTCAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp TTCATACTCATAGGCATGTGCAGGCCTGTGGGCTGTTaGATGATGACTTTGGAAATGACATTTCCAGGCAAT +
Preference number: 6 (lower is better)
Translates to: FILIGMCRPVGC*MMTLEMTFPGN
Trigger: ATTGCCTGGAAATGTCATTTCCAAAGTCATCATTCAACAGCCCACAGGCCTGCACATGCCTATGAGTATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp TGCTCTTTAATTGAATGCTGCAAGTGTCTGTACTCATaGGATATGCATCTTGCAAAGCTCGGCTGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: CSLIECCKCLYS*DMHLAKLGCSQ
Trigger: CTGGGAACAGCCGAGCTTTGCAAGATGCATATCCAATGAGTACAGACACTTGCAGCATTCAATTAAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp GGATCCATAAATGACTCCCTTCACCAAAGTGGAACACCAGAAGTCTaGGGCAGCATTAAATCCAAACATAACCAGGAGATAGGTGGAAAA +
Preference number: 6 (lower is better)
Translates to: GSINDSLHQSGTPEV*GSIKSKHNQEIGGK
Trigger: TTTTCCACCTATCTCCTGGTTATGTTTGGATTTAATGCTGCCCAAGACTTCTGGTGTTCCACTTTGGTGAAGGGAGTCATTTATGGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS CAA 90 bp TGTAATAGCCTTTCATGCGGCAAGGTTTCCATGCCAATATTCATCTaGCTCTCCTCTTTCATTGATGGCTGGGTGCTTACAGAACTTCTA +
Preference number: 6 (lower is better)
Translates to: CNSLSCGKVSMPIFI*LSSFIDGWVLTELL
Trigger: TAGAAGTTCTGTAAGCACCCAGCCATCAATGAAAGAGGAGAGCAAGATGAATATTGGCATGGAAACCTTGCCGCATGAAAGGCTATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp TCCTTGTTTTCTTCATCAAGAAGGTTGCTAACTATTTaGAAGAAGTTCTGGACCCCATCAGACGCAGGGATG +
Preference number: 6 (lower is better)
Translates to: SLFSSSRRLLTI*KKFWTPSDAGM
Trigger: CATCCCTGCGTCTGATGGGGTCCAGAACTTCTTTCAAATAGTTAGCAACCTTCTTGATGAAGAAAACAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 72 bp CTTGTTTGGTGCTGGGTTTTCCATACTGCTTGTGTTTaGTATGTCCCGAAATCTGTCCAAAGTCTGAAACTT +
Preference number: 6 (lower is better)
Translates to: LVWCWVFHTACV*YVPKSVQSLKL
Trigger: AAGTTTCAGACTTTGGACAGATTTCGGGACATACCAAACACAAGCAGTATGGAAAACCCAGCACCAAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp AATGACTCCCTTCACCAAAGTGGAACACCAGAAGTCTaGGGCAGCATTAAATCCAAACATAACCAGGAGATA +
Preference number: 6 (lower is better)
Translates to: NDSLHQSGTPEV*GSIKSKHNQEI
Trigger: TATCTCCTGGTTATGTTTGGATTTAATGCTGCCCAAGACTTCTGGTGTTCCACTTTGGTGAAGGGAGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS CAA 72 bp CTCCTTGTTTTCTTCATCAAGAAGGTTGCTAACTATTaGAAAGAAGTTCTGGACCCCATCAGACGCAGGGAT +
Preference number: 6 (lower is better)
Translates to: LLVFFIKKVANY*KEVLDPIRRRD
Trigger: ATCCCTGCGTCTGATGGGGTCCAGAACTTCTTTCAAATAGTTAGCAACCTTCTTGATGAAGAAAACAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp TCTTGTTTGGTGCTGGGTTTTCCATACTGCTTGTGTTaGGTATGTCCCGAAATCTGTCCAAAGTCTGAAACT +
Preference number: 6 (lower is better)
Translates to: SCLVLGFPYCLC*VCPEICPKSET
Trigger: AGTTTCAGACTTTGGACAGATTTCGGGACATACCAAACACAAGCAGTATGGAAAACCCAGCACCAAACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS GCA 72 bp TGTAGTGTAATAGCCTTTCATGCGGCAAGGTTTCCATaGCAATATTCATCTTGCTCTCCTCTTTCATTGATG +
Preference number: 6 (lower is better)
Translates to: CSVIAFHAARFP*QYSSCSPLSLM
Trigger: CATCAATGAAAGAGGAGAGCAAGATGAATATTGGCATGGAAACCTTGCCGCATGAAAGGCTATTACACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp CATCCCATAACACGCAATATGGATTCAAAGTGCCATTaGCCAAGTGAGCTAGCTCTATCTCCAAAAATGAGT +
Preference number: 6 (lower is better)
Translates to: HPITRNMDSKCH*PSELALSPKMS
Trigger: ACTCATTTTTGGAGATAGAGCTAGCTCACTTGGCAAATGGCACTTTGAATCCATATTGCGTGTTATGGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp CAGAATACCGCGATTTTCTTCTCTCTAGAGAACTCATTGATATCGTaGATCCAGTTTCACTTCTTGACAGTCCCACATTATCATCCAACT +
Preference number: 6 (lower is better)
Translates to: QNTAIFFSLENSLIS*IQFHFLTVPHYHPT
Trigger: AGTTGGATGATAATGTGGGACTGTCAAGAAGTGAAACTGGATCAACGATATCAATGAGTTCTCTAGAGAGAAGAAAATCGCGGTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp TGGGAAACATTTCACTTACAGAATAGGATCCATAAATaGCTCCCTTCACCAAAGTGGAACACCAGAAGTCTT +
Preference number: 6 (lower is better)
Translates to: WETFHLQNRIHK*LPSPKWNTRSL
Trigger: AAGACTTCTGGTGTTCCACTTTGGTGAAGGGAGTCATTTATGGATCCTATTCTGTAAGTGAAATGTTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS TCA 72 bp AACACGCAATATGGATTCAAAGTGCCATTTGCCAAGTaGGCTAGCTCTATCTCCAAAAATGAGTCAGTTGTT +
Preference number: 6 (lower is better)
Translates to: NTQYGFKVPFAK*ASSISKNESVV
Trigger: AACAACTGACTCATTTTTGGAGATAGAGCTAGCTCACTTGGCAAATGGCACTTTGAATCCATATTGCGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 72 bp ATGAATCAAACACGGCAAAAAGTATCTGAAACAATATaGAGCGTTTATCTGTCATGGCCAGAACTGCAGACA +
Preference number: 6 (lower is better)
Translates to: MNQTRQKVSETI*SVYLSWPELQT
Trigger: TGTCTGCAGTTCTGGCCATGACAGATAAACGCTCCATATTGTTTCAGATACTTTTTGCCGTGTTTGATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp CAGAATACCGCGATTTTCTTCTCTCTAGAGAACTCATaGATATCGTTGATCCAGTTTCACTTCTTGACAGTC +
Preference number: 6 (lower is better)
Translates to: QNTAIFFSLENS*ISLIQFHFLTV
Trigger: GACTGTCAAGAAGTGAAACTGGATCAACGATATCAATGAGTTCTCTAGAGAGAAGAAAATCGCGGTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 90 bp ATTTTGAGTCATCCCATAACACGCAATATGGATTCAAAGTGCCATTaGCCAAGTGAGCTAGCTCTATCTCCAAAAATGAGTCAGTTGTTT +
Preference number: 6 (lower is better)
Translates to: ILSHPITRNMDSKCH*PSELALSPKMSQLF
Trigger: AAACAACTGACTCATTTTTGGAGATAGAGCTAGCTCACTTGGCAAATGGCACTTTGAATCCATATTGCGTGTTATGGGATGACTCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp CTCGCCACTACATTTCCAGTCATTAGGTATGAATTTTaGAAGTCCATCATCCCCATTCCAACAATGTGTATA +
Preference number: 6 (lower is better)
Translates to: LATTFPVIRYEF*KSIIPIPTMCI
Trigger: TATACACATTGTTGGAATGGGGATGATGGACTTTCAAAATTCATACCTAATGACTGGAAATGTAGTGGCGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS TCA 72 bp AAGCCTTGTAATGAATCAAACACGGCAAAAAGTATCTaGAACAATATGGAGCGTTTATCTGTCATGGCCAGA +
Preference number: 6 (lower is better)
Translates to: KPCNESNTAKSI*NNMERLSVMAR
Trigger: TCTGGCCATGACAGATAAACGCTCCATATTGTTTCAGATACTTTTTGCCGTGTTTGATTCATTACAAGGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CAA 72 bp GCGATTTTCTTCTCTCTAGAGAACTCATTGATATCGTaGATCCAGTTTCACTTCTTGACAGTCCCACATTAT +
Preference number: 6 (lower is better)
Translates to: AIFFSLENSLIS*IQFHFLTVPHY
Trigger: ATAATGTGGGACTGTCAAGAAGTGAAACTGGATCAACGATATCAATGAGTTCTCTAGAGAGAAGAAAATCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000041838.7
ENSMUST00000126626.8
ENSMUST00000135518.8
ENSMUST00000146592.8
ENSMUST00000151309.8
CDS CCA 72 bp GGAAAATTTCAGGTAAATGCTATATTTGGTTGGATCTaGATTTTCCAGTGTCCAGGTGCAGTTTGTAAAGTT +
Preference number: 6 (lower is better)
Translates to: GKFQVNAIFGWI*IFQCPGAVCKV
Trigger: AACTTTACAAACTGCACCTGGACACTGGAAAATCCAGATCCAACCAAATATAGCATTTACCTGAAATTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8
CDS TCA 72 bp AATCCTGGGAAATCAGTTGGAAATACCCGGCGTATCTaGATGAAATTTTTATCGTACTGTAGAAAAACAAAA +
Preference number: 6 (lower is better)
Translates to: NPGKSVGNTRRI*MKFLSYCRKTK
Trigger: TTTTGTTTTTCTACAGTACGATAAAAATTTCATTCAGATACGCCGGGTATTTCCAACTGATTTCCCAGGATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000041838.7
ENSMUST00000135518.8
ENSMUST00000151309.8