RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRB2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028782

Ensembl transcript IDs: ENSMUST00000030571.7, ENSMUST00000097868.10, ENSMUST00000106015.9, ENSMUST00000106017.8, ENSMUST00000106018.9, ENSMUST00000120204.8, ENSMUST00000121049.8

Found 468 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGCCCCCAGCCAGGCTaGGTCCTCTGCGCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCPQPG*VLCASC
Trigger: GCAGGAGGCGCAGAGGACTCAGCCTGGCTGGGGGCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
3UTR-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGTCCTCTGCGCCTCCTaGCCAGCCTCGGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPVLCAS*PASGGG
Trigger: TCCCCCTCCCGAGGCTGGGCAGGAGGCGCAGAGGAC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
3UTR-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCAGGCCCTGCCAGTCTaGCTGCCCCCAGCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPQALPV*LPPARL
Trigger: CAGCCTGGCTGGGGGCAGCCAGACTGGCAGGGCCTG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
3UTR-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGCCCCCAGCCAGGCTaGGTCCTCTGCGCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPCPQPG*VLCASC
Trigger: GCAGGAGGCGCAGAGGACTCAGCCTGGCTGGGGGCA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
3UTR-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGTCCTCTGCGCCTCCTaGCCAGCCTCGGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPVLCAS*PASGGG
Trigger: TCCCCCTCCCGAGGCTGGGCAGGAGGCGCAGAGGAC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
3UTR-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCAGGCCCTGCCAGTCTaGCTGCCCCCAGCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPQALPV*LPPARL
Trigger: CAGCCTGGCTGGGGGCAGCCAGACTGGCAGGGCCTG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
3UTR-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGATATATATTTCTGTaGAGTGGGCAGTCCGGCGTG +
Preference number: 2 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRYIFL*SGQSGV
Trigger: CACGCCGGACTGCCCACTGCACAGAAATATATATCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
3UTR CCA 72 bp AGGGACAGACAGGCCGGGGCAAAGATGAGGCTCCAGTaGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: RDRQAGAKMRLQ*VAKGPLRTRRG
Trigger: GCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTTTGCCCCGGCCTGTCTGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACCCCCGCCCGCAGCTaGGGGAGCACAGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTPARS*GSTGSR
Trigger: CCTGGAGCCTGTGCTCCCGCAGCTGCGGGCGGGGGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGGCACCTGCGCACGTaGCCCAGGCTGGACCCGCCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGHLRT*PRLDPP
Trigger: TGGCGGGTCCAGCCTGGGCCACGTGCGCAGGTGCCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTGGTGGGCGTGGCCTaGGCCAGGGGGCACCGTTCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLVGVA*ARGHRS
Trigger: GGAACGGTGCCCCCTGGCCCAGGCCACGCCCACCAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGGAGAAGGCGCTGGTaGGCGTGGCCTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGRRRW*AWPGPG
Trigger: CCCTGGCCCAGGCCACGCCCACCAGCGCCTTCTCCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCCGAAGGGGCCCGCTaGACAGGGTCCCATAGGGGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPEGAR*TGSHRG
Trigger: CCCCCTATGGGACCCTGTGCAGCGGGCCCCTTCGGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCTGCCCGGGCTGCCTaGTGTGGCTGCCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPARAA*CGCPRC
Trigger: ACACCTGGGGCAGCCACAGCAGGCAGCCCGGGCAGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGGCAGAGCAGGCACTaGGGGCAGGGTCGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGQSRH*GQGRRP
Trigger: CGGCCTTCGACCCTGCCCCCAGTGCCTGCTCTGCCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCGGGCTGCCTGCTGTaGCTGCCCCAGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPGCLL*LPQVWL
Trigger: CAGCCACACCTGGGGCAGCCACAGCAGGCAGCCCGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCTGGGAGAAGGCGCTaGTGGGCGTGGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAGRRR*WAWPGP
Trigger: TGGCCCAGGCCACGCCCACCAGCGCCTTCTCCCAGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGGGAAGGAGCAGGCTaGCCCAGGGGCACCGCTCCG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPREGAG*PRGTAP
Trigger: CGGAGCGGTGCCCCTGGGCCAGCCTGCTCCTTCCCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000106015.9
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTCAGGCCGGGCCCTTaGGGCCTCCTCACCCGCTGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLRPGP*GLLTRC
Trigger: ACAGCGGGTGAGGAGGCCCCAAGGGCCCGGCCTGAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCCACAAGCCCTGCCTaGAGCCCGGCCACACTCCTC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPATSPA*SPATLL
Trigger: GAGGAGTGTGGCCGGGCTGCAGGCAGGGCTTGTGGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGAGCGGGTCCGCACCTaGAGACCCTGCCCACACGTC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPERVRT*RPCPHV
Trigger: GACGTGTGGGCAGGGTCTGCAGGTGCGGACCCGCTC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCATCCGTGAGGGCACCTaGGCACGTGGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPIREGT*ARGPGW
Trigger: CCAGCCTGGGCCACGTGCGCAGGTGCCCTCACGGAT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCACCCAGTCCTTCATaGCCCTGCGGCCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAPSPS*PCGPAW
Trigger: CCATGCGGGGCCGCAGGGGCATGAAGGACTGGGTGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCCCCACCACCAGGCTaGAGGCTCAAAGTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPPPPG*RLKVRR
Trigger: CCGGCGGACTTTGAGCCTGCAGCCTGGTGGTGGGGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCAGGCTGCTGTCCGGTaGAGGGCCAGCCGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPQAAVR*RASRSR
Trigger: CCGAGAACGGCTGGCCCTGCACCGGACAGCAGCCTG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGTGGGCTCCCAGGCTaGTGTCCGGTGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCGLPG*CPVQGQ
Trigger: CTGGCCCTGCACCGGACAGCAGCCTGGGAGCCCACA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCGGAGATGTGGTGGTaGCGGGGTTGGCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPEMWW*RGWPLP
Trigger: AGGCAGGGGCCAACCCCGCCACCACCACATCTCCGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCCGTTCTCGGGGCTTaGGGGGCAGTGAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAVLGA*GAVSPV
Trigger: CACTGGGCTCACTGCCCCCCAAGCCCCGAGAACGGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCTCCGCACCACCTGTaGCATGCCCTCACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAPHHL*HALTCQ
Trigger: CTGGCAGGTGAGGGCATGTCACAGGTGGTGCGGAGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGACCGCTCCACACGCTaGGCAGGGAAGGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPDRSTR*AGKEQA
Trigger: AGCCTGCTCCTTCCCTGCTCAGCGTGTGGAGCGGTC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106015.9
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGACCACTCCTCAGCTaGTGGGTCGCCTGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGPLLS*WVACLR
Trigger: GCGCAGACAGGCGACCCAGCAGCTGAGGAGTGGTCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCTGCCTGCTGTGGCTaGCCCAGGTGTGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAACCG*PRCGWL
Trigger: AAGCCAGCCACACCTGGGGCAGCCACAGCAGGCAGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGCAGAGGAAGCGCTTaGGAACCAGGCGGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGRGSA*EPGGCA
Trigger: TGCGCACCCGCCTGGTTCGCAAGCGCTTCCTCTGCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGCTGTGGCTTCCTCTaGACCAGGCCGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGCGFL*TRPQAG
Trigger: ACCTGCCTGCGGCCTGGTCCAGAGGAAGCCACAGCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCATTGGACAGGGTGTaGGCAACCGGAGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPALDRV*ATGGPG
Trigger: TCCGGGGCCTCCGGTTGCCCACACCCTGTCCAATGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCGGGCACCAGGGCATTaGACAGGGTGTGGGCAACCG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRAPGH*TGCGQP
Trigger: CGGTTGCCCACACCCTGTCCAATGCCCTGGTGCCCG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTCTTCGGGGTCAGCTaGGAGAAGGCGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLFGVS*EKALVG
Trigger: GCCCACCAGCGCCTTCTCCCAGCTGACCCCGAAGAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCAGCTGGAGGCTGGGTaGGGGGACGCACAGTCACTG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPQLEAG*GDAQSL
Trigger: CAGTGACTGTGCGTCCCCCCACCCAGCCTCCAGCTG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACACAACTCCAACCCTaGTGCTGCTGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTQLQP*CCCRRL
Trigger: GAGGCGGCGGCAGCAGCATCAGGGTTGGAGTTGTGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGCTCTGGAAGGCCTTaGGAGCGTCGCCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSSGRP*ERRPRG
Trigger: ACCTCGTGGGCGACGCTCTCAAGGCCTTCCAGAGCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCCGCATGGGAAACGTaGTGTCACTGGACACGGCGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPAWET*CHWTRR
Trigger: CCGCCGTGTCCAGTGACATCACGTTTCCCATGCGGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCAGTGGTGAGAAGCTaGGGCCACCCTCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAVVRS*GHPQDP
Trigger: TGGGTCCTGAGGGTGGCCTCAGCTTCTCACCACTGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCAAAGCCACAAGCCCTaGCTGCAGCCCGGCCACACT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPQSHKP*LQPGHT
Trigger: AGTGTGGCCGGGCTGCAGGCAGGGCTTGTGGCTTTG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCTGGGTCGCCTGTCTaGGCCATGTATAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAGSPV*AMYSPG
Trigger: GCCTGGGCTATACATGGCGCAGACAGGCGACCCAGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCGCACCTGCAGACCCTaGCCACACGTCAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRTCRP*PHVREH
Trigger: GTGTTCCCTGACGTGTGGGCAGGGTCTGCAGGTGCG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTACCCCCGCCCGCAGCTaGGGGAGCACAGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPTPARS*GSTGSR
Trigger: CCTGGAGCCTGTGCTCCCGCAGCTGCGGGCGGGGGT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTGGACCCGCCACACTaGATTTCCGGCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLDPPH*ISGCAA
Trigger: AGCAGCGCAGCCGGAAATGCAGTGTGGCGGGTCCAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCATGCGGAAGCGGCGTTaGCAGCCCGTGTCACACGTC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPMRKRR*QPVSHV
Trigger: GACGTGTGACACGGGCTGGCAACGCCGCTTCCGCAT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCAGAAGCCTGGCACATaGGGAAGCGGCGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPQKPGT*GSGVAS
Trigger: GCTGGCAACGCCGCTTCCGCATGTGCCAGGCTTCTG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGGCAGTCCCCAGTATaGTACGCCCTGGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGQSPV*YALGTE
Trigger: CTCAGTGCCCAGGGCGTAGCATACTGGGGACTGCCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCGTGCCAGTAGCTCCTaGAGGCTCCGCACCACCTGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRASSS*RLRTTC
Trigger: ACAGGTGGTGCGGAGCCTGCAGGAGCTACTGGCACG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGTCCTTCATGCCCCTaGGGCCCCGCATGGGAAACG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSPSCP*GPAWET
Trigger: CGTTTCCCATGCGGGGCCGCAGGGGCATGAAGGACT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGGTGCATACGCCCTTaGTCAGCACCCGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPWCIRP*SAPGTG
Trigger: GCCAGTCCCGGGTGCTGAGCAAGGGCGTATGCACCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGCCCGAGGCGATGGTaGGAAAGAGGTCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSPRRW*ERGPAA
Trigger: CGCTGCAGGACCTCTTTCCCACCATCGCCTCGGGCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCACGTGGCCCAGGCTaGACCCGCCACACTGCATTT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPARGPG*TRHTAF
Trigger: AAATGCAGTGTGGCGGGTCCAGCCTGGGCCACGTGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGGCACCTGCGCACGTaGCCCAGGCTGGACCCGCCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGHLRT*PRLDPP
Trigger: TGGCGGGTCCAGCCTGGGCCACGTGCGCAGGTGCCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGCCCCAGGTGTGGCTaGCTTTCCTGGGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCPRCG*LSWGGQ
Trigger: CTGTCCTCCCCAGGAAAGCCAGCCACACCTGGGGCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTGGTGGGCGTGGCCTaGGCCAGGGGGCACCGTTCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLVGVA*ARGHRS
Trigger: GGAACGGTGCCCCCTGGCCCAGGCCACGCCCACCAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGGAGAAGGCGCTGGTaGGCGTGGCCTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGRRRW*AWPGPG
Trigger: CCCTGGCCCAGGCCACGCCCACCAGCGCCTTCTCCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCAGGACGGCAAAGGTaGACAGGTGCTGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPGRQR*TGAGTG
Trigger: GCCAGTGCCAGCACCTGTCCACCTTTGCCGTCCTGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGGTCCTTGGGTGGCTaGGCCAGGACGGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRSLGG*ARTAKV
Trigger: CACCTTTGCCGTCCTGGCCCAGCCACCCAAGGACCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGTCAGGTCCTTGGGTaGCTGGGCCAGGACGGCAAA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGQVLG*LGQDGK
Trigger: TTTGCCGTCCTGGCCCAGCCACCCAAGGACCTGACC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACAGGGTTGGTCTCCTaGGGTGGTGGTGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTGLVS*GGGGSP
Trigger: AGGGGAGCCACCACCACCCCAGGAGACCAACCCTGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCTGGCTCTGGTACTTaGCGGGCGCTGGGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPGSGT*RALGVG
Trigger: ACCAACACCCAGCGCCCGCCAAGTACCAGAGCCAGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACGTTCTCCTGGCTCTaGTACTTGGCGGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTFSWL*YLAGAG
Trigger: CCCAGCGCCCGCCAAGTACCAGAGCCAGGAGAACGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCGGCTACGTTCTCCTaGCTCTGGTACTTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPATFS*LWYLAG
Trigger: GCCCGCCAAGTACCAGAGCCAGGAGAACGTAGCCGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTGGAAGTCGCCGTCTaGCGGTTCTGTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLEVAV*RFCGLP
Trigger: TGGGAGCCCACAGAACCGCCAGACGGCGACTTCCAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCACTGGGCAGGTGGCTaGATTGTTGCAAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPHWAGG*IVARPG
Trigger: ACCCGGCCTTGCAACAATTCAGCCACCTGCCCAGTG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTGGGGAGGACAGGCTaGGCACCTCCTTGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLGRTG*APPWVE
Trigger: TTCTACCCAAGGAGGTGCTCAGCCTGTCCTCCCCAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGATGGCCAGCAGGGTaGGCAGAGCCATGCAGGACA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRWPAG*AEPCRT
Trigger: TGTCCTGCATGGCTCTGCTCACCCTGCTGGCCATCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGCGCATCCGCCCGATaGCAGCCAGATAGGATTGCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCASAR*QPDRIA
Trigger: GGCAATCCTATCTGGCTGTCATCGGGCGGATGCGCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGGTTTCTCCTTGGCTaGGGACTGGCTACGGTAGCG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGFLLG*GLATVA
Trigger: CGCTACCGTAGCCAGTCCTCAGCCAAGGAGAAACCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCGGGGCAAAGTGTGTaGAAACCTGCTCCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAGQSV*KPAPAG
Trigger: ACCGGCAGGAGCAGGTTTGCACACACTTTGCCCCGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCCGAAGGGGCCCGCTaGACAGGGTCCCATAGGGGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPEGAR*TGSHRG
Trigger: CCCCCTATGGGACCCTGTGCAGCGGGCCCCTTCGGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTCACCTCCTCTCCTGTaGCCTCGCAAGGGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSPPLL*PRKGSP
Trigger: AGGGCTACCCTTGCGAGGGCACAGGAGAGGAGGTGA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCCCGCTGTAGTAAGTaGGCCGTGCCAGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPRCSK*AVPVAP
Trigger: AGGAGCTACTGGCACGGCGCACTTACTACAGCGGGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACAACACGCAGCAGGTaGACAGAGCCCGGTGACACC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTTRSR*TEPGDT
Trigger: GGTGTCACCGGGCTCTGTGCACCTGCTGCGTGTTGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCTGCCCGGGCTGCCTaGTGTGGCTGCCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPARAA*CGCPRC
Trigger: ACACCTGGGGCAGCCACAGCAGGCAGCCCGGGCAGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGCCATGCAGGACACTaGACAGCCGATCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSHAGH*TADHQG
Trigger: CCCCTGGTGATCGGCTGTGCAGTGTCCTGCATGGCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCATGTAAGGTCCAACTaGCGCAGGCCACCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPHVRSN*RRPPSP
Trigger: TGGGGAGGGTGGCCTGCGGCAGTTGGACCTTACATG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACGCCGTGCACTGTCTaGGCCATGTATAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTPCTV*AMYSPG
Trigger: GCCTGGGCTATACATGGCGCAGACAGTGCACGGCGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGGCAGAGCAGGCACTaGGGGCAGGGTCGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGQSRH*GQGRRP
Trigger: CGGCCTTCGACCCTGCCCCCAGTGCCTGCTCTGCCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGCAGCCCGAGGCGATaGTGGGAAAGAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSSPRR*WERGPA
Trigger: TGCAGGACCTCTTTCCCACCATCGCCTCGGGCTGCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCGTGTCACACGTCTTaGAGCACAGGCTCCACGCGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPCHTS*STGSTR
Trigger: ACGCGTGGAGCCTGTGCTCCAAGACGTGTGACACGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGTGTGCCAGAAGCCTaGCACATGCGGAAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCVPEA*HMRKRR
Trigger: ACGCCGCTTCCGCATGTGCCAGGCTTCTGGCACACA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCAGTATGCTACGCCCTaGGCACTGAGGAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPQYATP*ALRRQR
Trigger: CCGCTGTCTCCTCAGTGCCCAGGGCGTAGCATACTG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGTGGCTGGCTTTCCTaGGGAGGACAGGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCGWLS*GGQAEH
Trigger: GTGCTCAGCCTGTCCTCCCCAGGAAAGCCAGCCACA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCGGGCTGCCTGCTGTaGCTGCCCCAGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPGCLL*LPQVWL
Trigger: CAGCCACACCTGGGGCAGCCACAGCAGGCAGCCCGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCTGGGAGAAGGCGCTaGTGGGCGTGGCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAGRRR*WAWPGP
Trigger: TGGCCCAGGCCACGCCCACCAGCGCCTTCTCCCAGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTCCCAGCTGGCACAGTaGGGATCGGTGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSQLAQ*GSVVPL
Trigger: CAATGGCACCACCGATCCCCACTGTGCCAGCTGGGA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGGAGTAGTCCCAGCTaGCACAGTGGGGATCGGTGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPWSSPS*HSGDRW
Trigger: CCACCGATCCCCACTGTGCCAGCTGGGACTACTCCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTCAGCACCCGGGACTaGCCCACCAGGATCAGAATG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLSTRD*PTRIRM
Trigger: CATTCTGATCCTGGTGGGCCAGTCCCGGGTGCTGAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGGGAAGGAGCAGGCTaGCCCAGGGGCACCGCTCCG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPREGAG*PRGTAP
Trigger: CGGAGCGGTGCCCCTGGGCCAGCCTGCTCCTTCCCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106015.9
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGCGGCGATCTGTCATaGCCAGGACGGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSGDLS*PGRQTS
Trigger: GGATGTCTGCCGTCCTGGCCATGACAGATCGCCGCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACGGCAAAGAGTGCCTaGAAGAGGACGGAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTAKSA*KRTERR
Trigger: TCGCCGCTCCGTCCTCTTCCAGGCACTCTTTGCCGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCACTGGCAGCGGGTGTaGGCCGCCTGGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPHWQRV*AAWVSK
Trigger: CTTGGAGACCCAGGCGGCTCACACCCGCTGCCAGTG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCAGGAACTCCAGAGTaGAGCCATGGCATTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAGTPE*SHGIPG
Trigger: GCCAGGAATGCCATGGCTTCACTCTGGAGTTCCTGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106015.9
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCCACAAGCCCTGCCTaGAGCCCGGCCACACTCCTC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPATSPA*SPATLL
Trigger: GAGGAGTGTGGCCGGGCTGCAGGCAGGGCTTGTGGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACTACACCCTGGCTGTaGAAAGCCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTTPWL*KATSPA
Trigger: GGCAGGGCTTGTGGCTTTGCACAGCCAGGGTGTAGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGAGCGGGTCCGCACCTaGAGACCCTGCCCACACGTC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPERVRT*RPCPHV
Trigger: GACGTGTGGGCAGGGTCTGCAGGTGCGGACCCGCTC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTGCAGAGTTTAGTCTaGAGCTCGGGACCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLQSLV*SSGPSQ
Trigger: CTGCGAGGGTCCCGAGCTGCAGACTAAACTCTGCAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCATTTCCGGCTGCGCTaGTGGGTCCCATTGGCACAA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPHFRLR*WVPLAQ
Trigger: TTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTATCCGTGAGGGCACCTaGGCACGTGGCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPIREGT*ARGPGW
Trigger: CCAGCCTGGGCCACGTGCGCAGGTGCCCTCACGGAT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAAGGGTAGCCCTGTGTaGCAGAAGCCTGGCACATGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPKGSPV*QKPGTC
Trigger: GCATGTGCCAGGCTTCTGGCACACAGGGCTACCCTT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCACCCAGTCCTTCATaGCCCTGCGGCCCCGCATGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAPSPS*PCGPAW
Trigger: CCATGCGGGGCCGCAGGGGCATGAAGGACTGGGTGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGGCAGCCGTCATGGTaGATACGCCCTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRQPSW*IRPCSA
Trigger: TGCTGAGCAAGGGCGTATGCACCATGACGGCTGCCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCACCAGGACAATGACTaGTGCTGGACCCACGAAGGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPHQDND*CWTHEG
Trigger: GCCTTCGTGGGTCCAGCAGCAGTCATTGTCCTGGTG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCGGCGCAGGAAGCAGTaGACAGCGGTGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRRRKQ*TAVMTK
Trigger: CTTTGTCATCACCGCTGTGCACTGCTTCCTGCGCCG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCAGCTGCCCGTTCTTaGACGAGTCTGGGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAAARS*TSLGSL
Trigger: AAGACTCCCCAGACTCGTGCAAGAACGGGCAGCTGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCCCCACCACCAGGCTaGAGGCTCAAAGTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPPPPG*RLKVRR
Trigger: CCGGCGGACTTTGAGCCTGCAGCCTGGTGGTGGGGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCAGGCTGCTGTCCGGTaGAGGGCCAGCCGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPQAAVR*RASRSR
Trigger: CCGAGAACGGCTGGCCCTGCACCGGACAGCAGCCTG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGTGGGCTCCCAGGCTaGTGTCCGGTGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPCGLPG*CPVQGQ
Trigger: CTGGCCCTGCACCGGACAGCAGCCTGGGAGCCCACA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGTACTTGGTGGGGTCTaGGTTCTCCAGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPVLGGV*VLQGPG
Trigger: TCCTGGACCCTGGAGAACCCAGACCCCACCAAGTAC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGAGGGAGTACTTGGTaGGGTCTGGGTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRGSTW*GLGSPG
Trigger: CCCTGGAGAACCCAGACCCCACCAAGTACTCCCTCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCGGAGATGTGGTGGTaGCGGGGTTGGCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPEMWW*RGWPLP
Trigger: AGGCAGGGGCCAACCCCGCCACCACCACATCTCCGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCGTGCACTGGGCAGGTaGCTGAATTGTTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRALGR*LNCCKA
Trigger: GGCCTTGCAACAATTCAGCCACCTGCCCAGTGCACG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTTCCGGCTGCGCTGCTaGGTCCCATTGGCACAAGAT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPFRLRC*VPLAQD
Trigger: ATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGAAGGCAGCCGTCATaGTGCATACGCCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGRQPS*CIRPCS
Trigger: TGAGCAAGGGCGTATGCACCATGACGGCTGCCTTCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTGGTGAGGCTGCCATaGGTACCAGGATGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLVRLP*VPGCSQ
Trigger: CTGGGAACATCCTGGTACCCATGGCAGCCTCACCAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCACAGACAGGAAGCTaGGGTAGCCTTCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPQTGS*GSLQCG
Trigger: CCCACACTGAAGGCTACCCCAGCTTCCTGTCTGTGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGCGCTGGGTGTTGGTaGTGGTGGTTGGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGAGCW*WWLEGH
Trigger: ATGACCTTCCAACCACCACCACCAACACCCAGCGCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGCCCAGCTTCATGGTaGAACCAGGCACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSPASW*NQALYG
Trigger: CCCGTACAGTGCCTGGTTCCACCATGAAGCTGGGCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGGAGCCCAGCTTCATaGTGGAACCAGGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGSPAS*WNQALY
Trigger: GTACAGTGCCTGGTTCCACCATGAAGCTGGGCTCCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGCTGGGTTTCTCCTTaGCTGAGGACTGGCTACGGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGWVSP*LRTGYG
Trigger: ACCGTAGCCAGTCCTCAGCCAAGGAGAAACCCAGCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGACACTTGTTGTAAATaGTCTCGCCAGCTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPDTCCK*SRQLPP
Trigger: GGGCGGCAGCTGGCGAGATCATTTACAACAAGTGTC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCTCCGCACCACCTGTaGCATGCCCTCACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAPHHL*HALTCQ
Trigger: CTGGCAGGTGAGGGCATGTCACAGGTGGTGCGGAGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGTTCACCAGGACAATaGCTGCTGCTGGACCCACGA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCSPGQ*LLLDPR
Trigger: TCGTGGGTCCAGCAGCAGTCATTGTCCTGGTGAACA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGACCGCTCCACACGCTaGGCAGGGAAGGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPDRSTR*AGKEQA
Trigger: AGCCTGCTCCTTCCCTGCTCAGCGTGTGGAGCGGTC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106015.9
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAAGTGTGTGCAAACCTaGTCCTGCCGGTTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPKCVQT*SCRLKR
Trigger: GCGCTTCAACCGGCAGGAGCAGGTTTGCACACACTT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGGTGGCTGAATTGTTaGAAGGCCGGGTCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRWLNC*KAGSPE
Trigger: TTCGGGAGACCCGGCCTTGCAACAATTCAGCCACCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCTGCCTGCTGTGGCTaGCCCAGGTGTGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAACCG*PRCGWL
Trigger: AAGCCAGCCACACCTGGGGCAGCCACAGCAGGCAGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCAGAGGAAGCGCTTaGGAACCAGGCGGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGRGSA*EPGGCA
Trigger: TGCGCACCCGCCTGGTTCGCAAGCGCTTCCTCTGCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGAAAACGGCAAAGAGTaGCTGGAAGAGGACGGAGCG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPENGKE*LEEDGA
Trigger: CGCTCCGTCCTCTTCCAGGCACTCTTTGCCGTTTTC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGACAGGATCTGCAGCTaGCCGTTCTTGCACGAGTCT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPDRICS*PFLHES
Trigger: AGACTCGTGCAAGAACGGGCAGCTGCAGATCCTGTC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCTGTGGCTTCCTCTaGACCAGGCCGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGCGFL*TRPQAG
Trigger: ACCTGCCTGCGGCCTGGTCCAGAGGAAGCCACAGCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCATTGGACAGGGTGTaGGCAACCGGAGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPALDRV*ATGGPG
Trigger: TCCGGGGCCTCCGGTTGCCCACACCCTGTCCAATGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCGGGCACCAGGGCATTaGACAGGGTGTGGGCAACCG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRAPGH*TGCGQP
Trigger: CGGTTGCCCACACCCTGTCCAATGCCCTGGTGCCCG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCAGACCTTGGCCACTaGGTTTTCACCTTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPADLGH*VFTFGS
Trigger: GGAACCGAAGGTGAAAACCCAGTGGCCAAGGTCTGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTCTTCGGGGTCAGCTaGGAGAAGGCGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLFGVS*EKALVG
Trigger: GCCCACCAGCGCCTTCTCCCAGCTGACCCCGAAGAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCAGCTGGAGGCTGGGTaGGGGGACGCACAGTCACTG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPQLEAG*GDAQSL
Trigger: CAGTGACTGTGCGTCCCCCCACCCAGCCTCCAGCTG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGGGTCTCCAAGGTCTaGCAGCTCTCAGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPWVSKV*QLSVFQ
Trigger: CTGGAACACTGAGAGCTGCCAGACCTTGGAGACCCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCACGAGACAGGACTTaGGCTCCTCATCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPRDRT*APHPHP
Trigger: TGGATGAGGATGAGGAGCCCAAGTCCTGTCTCGTGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACATGTACACAGGGTTaGTCTCCTGGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTCTQG*SPGVVV
Trigger: CACCACCACCCCAGGAGACCAACCCTGTGTACATGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCTGGGTGTTGGTGGTaGTGGTTGGAAGGTCATTCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAGCWW*WLEGHS
Trigger: GGAATGACCTTCCAACCACCACCACCAACACCCAGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTTCCACTGGGCAGGTaGCTGAATTGTTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLPLGR*LNCCKA
Trigger: GGCCTTGCAACAATTCAGCCACCTGCCCAGTGGAAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120204.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCTGCTCCTGCCGGTTaGAGCGCAGGTAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPAPAG*SAGRGS
Trigger: ACTCCCTCTACCTGCGCTTCAACCGGCAGGAGCAGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTACACAACTCCAACCCTaGTGCTGCTGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPTQLQP*CCCRRL
Trigger: GAGGCGGCGGCAGCAGCATCAGGGTTGGAGTTGTGT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAAAGGTAAAGGGGCCTaGGCCACCACACAACTCCAA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPKGKGA*ATTQLQ
Trigger: TTGGAGTTGTGTGGTGGCTCAGGCCCCTTTACCTTT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGAGCACACCACAGGTaGACTGGCTGGAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRAHHR*TGWSCC
Trigger: ACAACAACTCCAGCCAGTTCACCTGTGGTGTGCTCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCATCTCATCTCGGTGGTaGACAGGTCATTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPISSRW*TGHCCS
Trigger: GGAGCAGCAATGACCTGTTCACCACCGAGATGAGAT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCGTCGCCCACGAGGTaGATGAAATCTTCCACAACA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPASPTR*MKSSTT
Trigger: TGTTGTGGAAGATTTCATTCACCTCGTGGGCGACGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGCTCTGGAAGGCCTTaGGAGCGTCGCCCACGAGGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSSGRP*ERRPRG
Trigger: ACCTCGTGGGCGACGCTCTCAAGGCCTTCCAGAGCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAAAGAGACGATCCTCTaGGTGTCGCACCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPKETIL*VSHPVL
Trigger: AAGGACTGGGTGCGACACTCAGAGGATCGTCTCTTT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTCATCACCCGGGAGGTaGCAGCAAGTGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSSPGR*QQVEAW
Trigger: CCAGGCCTCCACTTGCTGTCACCTCCCGGGTGATGA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCAGTGGTGAGAAGCTaGGGCCACCCTCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAVVRS*GHPQDP
Trigger: TGGGTCCTGAGGGTGGCCTCAGCTTCTCACCACTGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCCGACAGGCACAGCTaGACAAAGTTCTTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPADRHS*TKFLSK
Trigger: CTTCGACAAGAACTTTGTGCAGCTGTGCCTGTCGGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCAAAGCCACAAGCCCTaGCTGCAGCCCGGCCACACT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPQSHKP*LQPGHT
Trigger: AGTGTGGCCGGGCTGCAGGCAGGGCTTGTGGCTTTG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCTGGGTCGCCTGTCTaGGCCATGTATAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAGSPV*AMYSPG
Trigger: GCCTGGGCTATACATGGCGCAGACAGGCGACCCAGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCGCACCTGCAGACCCTaGCCACACGTCAGGGAACAC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRTCRP*PHVREH
Trigger: GTGTTCCCTGACGTGTGGGCAGGGTCTGCAGGTGCG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTGGACCCGCCACACTaGATTTCCGGCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLDPPH*ISGCAA
Trigger: AGCAGCGCAGCCGGAAATGCAGTGTGGCGGGTCCAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTATGCGGAAGCGGCGTTaGCAGCCCGTGTCACACGTC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPMRKRR*QPVSHV
Trigger: GACGTGTGACACGGGCTGGCAACGCCGCTTCCGCAT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCAGAAGCCTGGCACATaGGGAAGCGGCGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPQKPGT*GSGVAS
Trigger: GCTGGCAACGCCGCTTCCGCATGTGCCAGGCTTCTG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGACACCTCTTCTCACTaGAGGGTTTCACCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPDTSSH*RVSPPL
Trigger: GAGAGGAGGTGAAACCCTGCAGTGAGAAGAGGTGTC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAATGATCTCGCCAGCTaGCGCCCTCTTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPNDLAS*RPLPCH
Trigger: ATGACATGGAAGAGGGCGGCAGCTGGCGAGATCATT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGGCAGTCCCCAGTATaGTACGCCCTGGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGQSPV*YALGTE
Trigger: CTCAGTGCCCAGGGCGTAGCATACTGGGGACTGCCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCGTGCCAGTAGCTCCTaGAGGCTCCGCACCACCTGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRASSS*RLRTTC
Trigger: ACAGGTGGTGCGGAGCCTGCAGGAGCTACTGGCACG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGTCCTTCATGCCCCTaGGGCCCCGCATGGGAAACG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSPSCP*GPAWET
Trigger: CGTTTCCCATGCGGGGCCGCAGGGGCATGAAGGACT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAAACCTCCAGAAGGCTaGATAGATGGCCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPKPPEG*IDGQQG
Trigger: ACCCTGCTGGCCATCTATGCAGCCTTCTGGAGGTTT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGGTGCATACGCCCTTaGTCAGCACCCGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPWCIRP*SAPGTG
Trigger: GCCAGTCCCGGGTGCTGAGCAAGGGCGTATGCACCA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAAGTCTGACAGGATCTaGAGCTGCCCGTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPKSDRI*SCPFLH
Trigger: GTGCAAGAACGGGCAGCTGCAGATCCTGTCAGACTT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGCCCGAGGCGATGGTaGGAAAGAGGTCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSPRRW*ERGPAA
Trigger: CGCTGCAGGACCTCTTTCCCACCATCGCCTCGGGCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGGACAACTACACCCTaGCTGTGCAAAGCCACAAGC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRTTTP*LCKATS
Trigger: GCTTGTGGCTTTGCACAGCCAGGGTGTAGTTGTCCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTCCCTGCACATCTCATaGAAGGCTGGACACCTCTTC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSLHIS*KAGHLF
Trigger: GAAGAGGTGTCCAGCCTTCCATGAGATGTGCAGGGA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGCAACGAGCAAAGCTaGGCAGTCCCCAGTATGCTA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCNEQS*AVPSML
Trigger: TAGCATACTGGGGACTGCCCAGCTTTGCTCGTTGCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGTTGGTATCTGCTCTaGAGTAGTCCCAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSWYLL*SSPSWH
Trigger: GTGCCAGCTGGGACTACTCCAGAGCAGATACCAACT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGTCAGGTCCTTGGGTaGCTGGGCCAGGACGGCAAA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGQVLG*LGQDGK
Trigger: TTTGCCGTCCTGGCCCAGCCACCCAAGGACCTGACC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGACAATGACTGCTGCTaGACCCACGAAGGCATAGAG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPDNDCC*THEGIE
Trigger: CTCTATGCCTTCGTGGGTCCAGCAGCAGTCATTGTC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTACAGGGTTGGTCTCCTaGGGTGGTGGTGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPTGLVS*GGGGSP
Trigger: AGGGGAGCCACCACCACCCCAGGAGACCAACCCTGT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCGGGCGCTGGGTGTTaGTGGTGGTGGTTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAGAGC*WWWLEG
Trigger: ACCTTCCAACCACCACCACCAACACCCAGCGCCCGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCTGGCTCTGGTACTTaGCGGGCGCTGGGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPGSGT*RALGVG
Trigger: ACCAACACCCAGCGCCCGCCAAGTACCAGAGCCAGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCGGCTACGTTCTCCTaGCTCTGGTACTTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPATFS*LWYLAG
Trigger: GCCCGCCAAGTACCAGAGCCAGGAGAACGTAGCCGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTGGAAGTCGCCGTCTaGCGGTTCTGTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLEVAV*RFCGLP
Trigger: TGGGAGCCCACAGAACCGCCAGACGGCGACTTCCAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTGGGGAGGACAGGCTaGGCACCTCCTTGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLGRTG*APPWVE
Trigger: TTCTACCCAAGGAGGTGCTCAGCCTGTCCTCCCCAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGATGGCCAGCAGGGTaGGCAGAGCCATGCAGGACA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRWPAG*AEPCRT
Trigger: TGTCCTGCATGGCTCTGCTCACCCTGCTGGCCATCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGCGCATCCGCCCGATaGCAGCCAGATAGGATTGCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPCASAR*QPDRIA
Trigger: GGCAATCCTATCTGGCTGTCATCGGGCGGATGCGCA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTTCTTAGATTTGTCTaGGACGCCATCGCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLLRFV*DAIASH
Trigger: ATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGCCTTGTGCAGAGTTaGAAACGGCAAAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSLVQS*KRQRVP
Trigger: AGGCACTCTTTGCCGTTTTCAACTCTGCACAAGGCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTTGAACAGAACTGTCTaGCAAGCCAGATCCACGTCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLNRTV*QARSTS
Trigger: GGACGTGGATCTGGCTTGTCAGACAGTTCTGTTCAA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGTGGAACTTCTGGTTaGGTTCGTGGTAGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCGTSG*VRGRVP
Trigger: CGGAACTCTACCACGAACTCAACCAGAAGTTCCACA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCAGGAACTCCAGAGTaGAGCCCCAGCCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAGTPE*SPSPLL
Trigger: AAGCAGAGGGCTGGGGCTTCACTCTGGAGTTCCTGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120204.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGGTTTCTCCTTGGCTaGGGACTGGCTACGGTAGCG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGFLLG*GLATVA
Trigger: CGCTACCGTAGCCAGTCCTCAGCCAAGGAGAAACCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCGGGGCAAAGTGTGTaGAAACCTGCTCCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAGQSV*KPAPAG
Trigger: ACCGGCAGGAGCAGGTTTGCACACACTTTGCCCCGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTTGCTGCTCCCCGAGTaGAAGTCGGCCTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLLLPE*KSASAG
Trigger: TCCTGCTGAGGCCGACTTGCACTCGGGGAGCAGCAA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCACTGCATTTCCGGCTaGGCTGCTGGGTCCCATTGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPHCISG*AAGSHW
Trigger: CCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTCACCTCCTCTCCTGTaGCCTCGCAAGGGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSPPLL*PRKGSP
Trigger: AGGGCTACCCTTGCGAGGGCACAGGAGAGGAGGTGA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTCACGTACTCATCCCTaGACATCTCATGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSRTHP*TSHGRL
Trigger: CAGCCTTCCATGAGATGTGCAGGGATGAGTACGTGA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCCCGCTGTAGTAAGTaGGCCGTGCCAGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPRCSK*AVPVAP
Trigger: AGGAGCTACTGGCACGGCGCACTTACTACAGCGGGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTACAACACGCAGCAGGTaGACAGAGCCCGGTGACACC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPTTRSR*TEPGDT
Trigger: GGTGTCACCGGGCTCTGTGCACCTGCTGCGTGTTGT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGCCATGCAGGACACTaGACAGCCGATCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSHAGH*TADHQG
Trigger: CCCCTGGTGATCGGCTGTGCAGTGTCCTGCATGGCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCATGTAAGGTCCAACTaGCGCAGGCCACCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPHVRSN*RRPPSP
Trigger: TGGGGAGGGTGGCCTGCGGCAGTTGGACCTTACATG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGCCGTTTCCGAGTGTaGATCACCTTCTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCRFRV*ITFSKS
Trigger: GGACTTTGAGAAGGTGATGCACACTCGGAAACGGCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTCATCTGCAGACCTTaGCCACTGGGTTTTCACCTT +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLICRP*PLGFHL
Trigger: AAGGTGAAAACCCAGTGGCCAAGGTCTGCAGATGAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGTGTGCCAGAAGCCTaGCACATGCGGAAGCGGCGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPCVPEA*HMRKRR
Trigger: ACGCCGCTTCCGCATGTGCCAGGCTTCTGGCACACA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCAGTATGCTACGCCCTaGGCACTGAGGAGACAGCGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPQYATP*ALRRQR
Trigger: CCGCTGTCTCCTCAGTGCCCAGGGCGTAGCATACTG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCATGAAGCTCACCACCTaGAAGAAACGCTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPMKLTT*KKRCTS
Trigger: TGACGTGCAGCGTTTCTTCCAGGTGGTGAGCTTCAT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGTGGCTGGCTTTCCTaGGGAGGACAGGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPCGWLS*GGQAEH
Trigger: GTGCTCAGCCTGTCCTCCCCAGGAAAGCCAGCCACA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTCCCAGCTGGCACAGTaGGGATCGGTGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSQLAQ*GSVVPL
Trigger: CAATGGCACCACCGATCCCCACTGTGCCAGCTGGGA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGGAGTAGTCCCAGCTaGCACAGTGGGGATCGGTGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPWSSPS*HSGDRW
Trigger: CCACCGATCCCCACTGTGCCAGCTGGGACTACTCCA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTCAGCACCCGGGACTaGCCCACCAGGATCAGAATG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLSTRD*PTRIRM
Trigger: CATTCTGATCCTGGTGGGCCAGTCCCGGGTGCTGAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGCGGCGATCTGTCATaGCCAGGACGGCAGACATCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSGDLS*PGRQTS
Trigger: GGATGTCTGCCGTCCTGGCCATGACAGATCGCCGCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTACGGCAAAGAGTGCCTaGAAGAGGACGGAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPTAKSA*KRTERR
Trigger: TCGCCGCTCCGTCCTCTTCCAGGCACTCTTTGCCGT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGGTGTTGGTGGTGGTaGTTGGAAGGTCATTCCATA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGCWWW*LEGHSI
Trigger: TATGGAATGACCTTCCAACCACCACCACCAACACCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGAGATAGGCTCTCTCTaGATGCTGATCACCAGATTG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPEIGSL*MLITRL
Trigger: CAATCTGGTGATCAGCATTCAGAGAGAGCCTATCTC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAAGGTGCTCCAGCTTTaGTGCCTCCTGTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPKVLQL*CLLCWD
Trigger: GTCCCAGCACAGGAGGCATCAAAGCTGGAGCACCTT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTACTACACCCTGGCTGTaGAAAGCCACAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPTTPWL*KATSPA
Trigger: GGCAGGGCTTGTGGCTTTGCACAGCCAGGGTGTAGT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTGCAGAGTTTAGTCTaGAGCTCGGGACCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLQSLV*SSGPSQ
Trigger: CTGCGAGGGTCCCGAGCTGCAGACTAAACTCTGCAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCATTTCCGGCTGCGCTaGTGGGTCCCATTGGCACAA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPHFRLR*WVPLAQ
Trigger: TTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAAGGGTAGCCCTGTGTaGCAGAAGCCTGGCACATGC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPKGSPV*QKPGTC
Trigger: GCATGTGCCAGGCTTCTGGCACACAGGGCTACCCTT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGTATTCATGGGATATaGAACGAGCAAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGIHGI*NEQSWA
Trigger: TGCCCAGCTTTGCTCGTTGCATATCCCATGAATACC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGGCAGCCGTCATGGTaGATACGCCCTTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRQPSW*IRPCSA
Trigger: TGCTGAGCAAGGGCGTATGCACCATGACGGCTGCCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCACCAGGACAATGACTaGTGCTGGACCCACGAAGGC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPHQDND*CWTHEG
Trigger: GCCTTCGTGGGTCCAGCAGCAGTCATTGTCCTGGTG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCGGCGCAGGAAGCAGTaGACAGCGGTGATGACAAAG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRRRKQ*TAVMTK
Trigger: CTTTGTCATCACCGCTGTGCACTGCTTCCTGCGCCG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCAGCTGCCCGTTCTTaGACGAGTCTGGGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAAARS*TSLGSL
Trigger: AAGACTCCCCAGACTCGTGCAAGAACGGGCAGCTGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGTACTTGGTGGGGTCTaGGTTCTCCAGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPVLGGV*VLQGPG
Trigger: TCCTGGACCCTGGAGAACCCAGACCCCACCAAGTAC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGAGGGAGTACTTGGTaGGGTCTGGGTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRGSTW*GLGSPG
Trigger: CCCTGGAGAACCCAGACCCCACCAAGTACTCCCTCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACACCACAGGTGAACTaGCTGGAGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTPQVN*LELLLL
Trigger: CAACAACAACAACTCCAGCCAGTTCACCTGTGGTGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCGTGCACTGGGCAGGTaGCTGAATTGTTGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRALGR*LNCCKA
Trigger: GGCCTTGCAACAATTCAGCCACCTGCCCAGTGCACG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTTCCGGCTGCGCTGCTaGGTCCCATTGGCACAAGAT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPFRLRC*VPLAQD
Trigger: ATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGAAGGCAGCCGTCATaGTGCATACGCCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGRQPS*CIRPCS
Trigger: TGAGCAAGGGCGTATGCACCATGACGGCTGCCTTCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCACAGCCAGCAGTAGCTaGATGTACCATATCCTTTGG +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPTASSS*MYHILW
Trigger: CCAAAGGATATGGTACATCCAGCTACTGCTGGCTGT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTGGTGAGGCTGCCATaGGTACCAGGATGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLVRLP*VPGCSQ
Trigger: CTGGGAACATCCTGGTACCCATGGCAGCCTCACCAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCACAGACAGGAAGCTaGGGTAGCCTTCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPQTGS*GSLQCG
Trigger: CCCACACTGAAGGCTACCCCAGCTTCCTGTCTGTGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCGCTGGGTGTTGGTaGTGGTGGTTGGAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGAGCW*WWLEGH
Trigger: ATGACCTTCCAACCACCACCACCAACACCCAGCGCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGCCCAGCTTCATGGTaGAACCAGGCACTGTACGGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSPASW*NQALYG
Trigger: CCCGTACAGTGCCTGGTTCCACCATGAAGCTGGGCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGGAGCCCAGCTTCATaGTGGAACCAGGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGSPAS*WNQALY
Trigger: GTACAGTGCCTGGTTCCACCATGAAGCTGGGCTCCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCTGGGTTTCTCCTTaGCTGAGGACTGGCTACGGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGWVSP*LRTGYG
Trigger: ACCGTAGCCAGTCCTCAGCCAAGGAGAAACCCAGCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGGAGTTGTTGTTGTTaGTCAGCAAGACCTCCACAA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPWSCCC*SARPPQ
Trigger: TTGTGGAGGTCTTGCTGATCAACAACAACAACTCCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGACACTTGTTGTAAATaGTCTCGCCAGCTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPDTCCK*SRQLPP
Trigger: GGGCGGCAGCTGGCGAGATCATTTACAACAAGTGTC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGTTCACCAGGACAATaGCTGCTGCTGGACCCACGA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPCSPGQ*LLLDPR
Trigger: TCGTGGGTCCAGCAGCAGTCATTGTCCTGGTGAACA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAAGTGTGTGCAAACCTaGTCCTGCCGGTTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPKCVQT*SCRLKR
Trigger: GCGCTTCAACCGGCAGGAGCAGGTTTGCACACACTT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGAAAACGGCAAAGAGTaGCTGGAAGAGGACGGAGCG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPENGKE*LEEDGA
Trigger: CGCTCCGTCCTCTTCCAGGCACTCTTTGCCGTTTTC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGACAGGATCTGCAGCTaGCCGTTCTTGCACGAGTCT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPDRICS*PFLHES
Trigger: AGACTCGTGCAAGAACGGGCAGCTGCAGATCCTGTC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCAGACCTTGGCCACTaGGTTTTCACCTTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPADLGH*VFTFGS
Trigger: GGAACCGAAGGTGAAAACCCAGTGGCCAAGGTCTGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCACGAGACAGGACTTaGGCTCCTCATCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPRDRT*APHPHP
Trigger: TGGATGAGGATGAGGAGCCCAAGTCCTGTCTCGTGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTACATGTACACAGGGTTaGTCTCCTGGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPTCTQG*SPGVVV
Trigger: CACCACCACCCCAGGAGACCAACCCTGTGTACATGT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCTGGGTGTTGGTGGTaGTGGTTGGAAGGTCATTCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAGCWW*WLEGHS
Trigger: GGAATGACCTTCCAACCACCACCACCAACACCCAGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAAAGGTAAAGGGGCCTaGGCCACCACACAACTCCAA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPKGKGA*ATTQLQ
Trigger: TTGGAGTTGTGTGGTGGCTCAGGCCCCTTTACCTTT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGAGCACACCACAGGTaGACTGGCTGGAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRAHHR*TGWSCC
Trigger: ACAACAACTCCAGCCAGTTCACCTGTGGTGTGCTCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTATCTCATCTCGGTGGTaGACAGGTCATTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPISSRW*TGHCCS
Trigger: GGAGCAGCAATGACCTGTTCACCACCGAGATGAGAT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTTTGTCCTTGTTTTCTaGATCCACCATGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPFVLVF*IHHEAH
Trigger: GTGAGCTTCATGGTGGATTCAGAAAACAAGGACAAA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCGTCGCCCACGAGGTaGATGAAATCTTCCACAACA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPASPTR*MKSSTT
Trigger: TGTTGTGGAAGATTTCATTCACCTCGTGGGCGACGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAAAGAGACGATCCTCTaGGTGTCGCACCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPKETIL*VSHPVL
Trigger: AAGGACTGGGTGCGACACTCAGAGGATCGTCTCTTT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCCGACAGGCACAGCTaGACAAAGTTCTTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPADRHS*TKFLSK
Trigger: CTTCGACAAGAACTTTGTGCAGCTGTGCCTGTCGGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAATGATCTCGCCAGCTaGCGCCCTCTTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPNDLAS*RPLPCH
Trigger: ATGACATGGAAGAGGGCGGCAGCTGGCGAGATCATT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAAACCTCCAGAAGGCTaGATAGATGGCCAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPKPPEG*IDGQQG
Trigger: ACCCTGCTGGCCATCTATGCAGCCTTCTGGAGGTTT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGATGACAAAGCCTTGTaGAGAGTTGAAAACGGCAAA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPDDKAL*RVENGK
Trigger: TTTGCCGTTTTCAACTCTGCACAAGGCTTTGTCATC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAAGTCTGACAGGATCTaGAGCTGCCCGTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPKSDRI*SCPFLH
Trigger: GTGCAAGAACGGGCAGCTGCAGATCCTGTCAGACTT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGGACAACTACACCCTaGCTGTGCAAAGCCACAAGC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRTTTP*LCKATS
Trigger: GCTTGTGGCTTTGCACAGCCAGGGTGTAGTTGTCCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTCCCTGCACATCTCATaGAAGGCTGGACACCTCTTC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSLHIS*KAGHLF
Trigger: GAAGAGGTGTCCAGCCTTCCATGAGATGTGCAGGGA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGCAACGAGCAAAGCTaGGCAGTCCCCAGTATGCTA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPCNEQS*AVPSML
Trigger: TAGCATACTGGGGACTGCCCAGCTTTGCTCGTTGCA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTACAATGAGAGAGCTCTaGAAGGCCTTGAGAGCGTCG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPTMREL*KALRAS
Trigger: CGACGCTCTCAAGGCCTTCCAGAGCTCTCTCATTGT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGTTGGTATCTGCTCTaGAGTAGTCCCAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSWYLL*SSPSWH
Trigger: GTGCCAGCTGGGACTACTCCAGAGCAGATACCAACT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCAGGATCAGAATGTTaGAAGCCAGGATGGACAGGC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPGSEC*KPGWTG
Trigger: GCCTGTCCATCCTGGCTTCCAACATTCTGATCCTGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGACAATGACTGCTGCTaGACCCACGAAGGCATAGAG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPDNDCC*THEGIE
Trigger: CTCTATGCCTTCGTGGGTCCAGCAGCAGTCATTGTC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGATGATGGAGCGTTCTaGTTTTATAAACCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPDDGAF*FYKPPE
Trigger: TTCTGGAGGTTTATAAAATCAGAACGCTCCATCATC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGAAGTTCAGCAAGATaGTGGAGCGTTCTGATTTTA +
Preference number: 4 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRSSAR*WSVLIL
Trigger: TAAAATCAGAACGCTCCATCATCTTGCTGAACTTCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTTCTTAGATTTGTCTaGGACGCCATCGCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLLRFV*DAIASH
Trigger: ATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGCCTTGTGCAGAGTTaGAAACGGCAAAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSLVQS*KRQRVP
Trigger: AGGCACTCTTTGCCGTTTTCAACTCTGCACAAGGCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTTGAACAGAACTGTCTaGCAAGCCAGATCCACGTCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLNRTV*QARSTS
Trigger: GGACGTGGATCTGGCTTGTCAGACAGTTCTGTTCAA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGTGGAACTTCTGGTTaGGTTCGTGGTAGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPCGTSG*VRGRVP
Trigger: CGGAACTCTACCACGAACTCAACCAGAAGTTCCACA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTCACGTACTCATCCCTaGACATCTCATGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSRTHP*TSHGRL
Trigger: CAGCCTTCCATGAGATGTGCAGGGATGAGTACGTGA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGCCGTTTCCGAGTGTaGATCACCTTCTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPCRFRV*ITFSKS
Trigger: GGACTTTGAGAAGGTGATGCACACTCGGAAACGGCA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGAAGCCCCAGCCCTCTaGTTCTTAGATTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPEAPAL*FLDLSE
Trigger: CTCAGACAAATCTAAGAAGCAGAGGGCTGGGGCTTC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120204.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTCATCTGCAGACCTTaGCCACTGGGTTTTCACCTT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLICRP*PLGFHL
Trigger: AAGGTGAAAACCCAGTGGCCAAGGTCTGCAGATGAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTATGAAGCTCACCACCTaGAAGAAACGCTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPMKLTT*KKRCTS
Trigger: TGACGTGCAGCGTTTCTTCCAGGTGGTGAGCTTCAT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGAGATAGGCTCTCTCTaGATGCTGATCACCAGATTG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPEIGSL*MLITRL
Trigger: CAATCTGGTGATCAGCATTCAGAGAGAGCCTATCTC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGAAAAAGACACAGTTaGGAGCCATATCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGKRHS*EPYPQR
Trigger: TCTCTGGGGATATGGCTCTCAACTGTGTCTTTTTCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGTATTCATGGGATATaGAACGAGCAAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGIHGI*NEQSWA
Trigger: TGCCCAGCTTTGCTCGTTGCATATCCCATGAATACC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTACACCACAGGTGAACTaGCTGGAGTTGTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPTPQVN*LELLLL
Trigger: CAACAACAACAACTCCAGCCAGTTCACCTGTGGTGT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTACAGCCAGCAGTAGCTaGATGTACCATATCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPTASSS*MYHILW
Trigger: CCAAAGGATATGGTACATCCAGCTACTGCTGGCTGT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGGAGTTGTTGTTGTTaGTCAGCAAGACCTCCACAA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPWSCCC*SARPPQ
Trigger: TTGTGGAGGTCTTGCTGATCAACAACAACAACTCCA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAAGTTCTTGTCGAAGTaGAGAAAGGTAAAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPKFLSK*RKVKGP
Trigger: AGGCCCCTTTACCTTTCTGCACTTCGACAAGAACTT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTTTGTCCTTGTTTTCTaGATCCACCATGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPFVLVF*IHHEAH
Trigger: GTGAGCTTCATGGTGGATTCAGAAAACAAGGACAAA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR GCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGATGACAAAGCCTTGTaGAGAGTTGAAAACGGCAAA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPDDKAL*RVENGK
Trigger: TTTGCCGTTTTCAACTCTGCACAAGGCTTTGTCATC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGCCCTTGGAAGCTTTaGAAAAAGACACAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSPWKL*KKTQLR
Trigger: TCTCAACTGTGTCTTTTTCCAAAGCTTCCAAGGGCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGATGATGGAGCGTTCTaGTTTTATAAACCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPDDGAF*FYKPPE
Trigger: TTCTGGAGGTTTATAAAATCAGAACGCTCCATCATC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR TCA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGAAGTTCAGCAAGATaGTGGAGCGTTCTGATTTTA +
Preference number: 4 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRSSAR*WSVLIL
Trigger: TAAAATCAGAACGCTCCATCATCTTGCTGAACTTCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCTCAGGCCGGGCCCTaGGGGCCTCCTCACCCGCTG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPQAGP*GPPHPL
Trigger: CAGCGGGTGAGGAGGCCCCAAGGGCCCGGCCTGAGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp GCAGGACACTGCACAGCCGATCACCAGGGGGACAGAGGGAGCACCTaGCAGCTCCAGGGTCAGGTCCTTGGGTGGCTGGGCCAGGACGGC +
Preference number: 5 (lower is better)
Translates to: AGHCTADHQGDRGST*QLQGQVLGWLGQDG
Trigger: GCCGTCCTGGCCCAGCCACCCAAGGACCTGACCCTGGAGCTGGCAGGTGCTCCCTCTGTCCCCCTGGTGATCGGCTGTGCAGTGTCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp GCTCCAGGGTCAGGTCCTTGGGTGGCTGGGCCAGGACGGCAAAGGTaGACAGGTGCTGGCACTGGCAGCGGGTGTGAGCCGCCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: APGSGPWVAGPGRQR*TGAGTGSGCEPPGS
Trigger: AGACCCAGGCGGCTCACACCCGCTGCCAGTGCCAGCACCTGTCCACCTTTGCCGTCCTGGCCCAGCCACCCAAGGACCTGACCCTGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS TCA 90 bp CGTCAGTGGCCGGGCAATCGAGATTGCTGCACTCACGGGTATCCGTaGGGGCACCTGCGCACGTGGCCCAGGCTGGACCCGCCACACTGC +
Preference number: 5 (lower is better)
Translates to: RQWPGNRDCCTHGYP*GHLRTWPRLDPPHC
Trigger: GCAGTGTGGCGGGTCCAGCCTGGGCCACGTGCGCAGGTGCCCTCACGGATACCCGTGAGTGCAGCAATCTCGATTGCCCGGCCACTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp CCTGGCACATGCGGAAGCGGCGTTGCCAGCCCGTGTCACACGTCTTaGAGCACAGGCTCCACGCGTTCCACGGCCCCCACTTGCCGTCAG +
Preference number: 5 (lower is better)
Translates to: PGTCGSGVASPCHTS*STGSTRSTAPTCRQ
Trigger: CTGACGGCAAGTGGGGGCCGTGGAACGCGTGGAGCCTGTGCTCCAAGACGTGTGACACGGGCTGGCAACGCCGCTTCCGCATGTGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCGGGCACCAGGGCATaGGACAGGGTGTGGGCAACC +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPGTRA*DRVWAT
Trigger: GGTTGCCCACACCCTGTCCAATGCCCTGGTGCCCGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGCGGGCGCTGGGTGTaGGTGGTGGTGGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGGRWV*VVVVGR
Trigger: CCTTCCAACCACCACCACCAACACCCAGCGCCCGCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp CTGCGCACGTGGCCCAGGCTGGACCCGCCACACTGCATTTCCGGCTaGGCTGCTGGGTCCCATTGGCACAAGATGATGAGCATGGGCCCC +
Preference number: 5 (lower is better)
Translates to: LRTWPRLDPPHCISG*AAGSHWHKMMSMGP
Trigger: GGGGCCCATGCTCATCATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTGTGGCGGGTCCAGCCTGGGCCACGTGCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp GTGGCCCAGGCTGGACCCGCCACACTGCATTTCCGGCTGCGCTGCTaGGTCCCATTGGCACAAGATGATGAGCATGGGCCCCAGGGACCC +
Preference number: 5 (lower is better)
Translates to: VAQAGPATLHFRLRC*VPLAQDDEHGPQGP
Trigger: GGGTCCCTGGGGCCCATGCTCATCATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTGTGGCGGGTCCAGCCTGGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp CACAGCACCGATCACAAAGTAGGAGGAGGACTCTTCGGGGTCAGCTaGGAGAAGGCGCTGGTGGGCGTGGCCTGGGCCAGGGGGCACCGT +
Preference number: 5 (lower is better)
Translates to: HSTDHKVGGGLFGVS*EKALVGVAWARGHR
Trigger: ACGGTGCCCCCTGGCCCAGGCCACGCCCACCAGCGCCTTCTCCCAGCTGACCCCGAAGAGTCCTCCTCCTACTTTGTGATCGGTGCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp AGGCAGGGCCCAGCCCTAGACCCGAGTGCTCCACAGACAGGAAGCTaGGGTAGCCTTCAGTGTGGGCTACCGTTTTGGCAGCCCGCCGGG +
Preference number: 5 (lower is better)
Translates to: RQGPALDPSAPQTGS*GSLQCGLPFWQPAG
Trigger: CCCGGCGGGCTGCCAAAACGGTAGCCCACACTGAAGGCTACCCCAGCTTCCTGTCTGTGGAGCACTCGGGTCTAGGGCTGGGCCCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCCGTGTCACACGTCTaGGAGCACAGGCTCCACGCG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPVSHV*EHRLHA
Trigger: CGCGTGGAGCCTGTGCTCCAAGACGTGTGACACGGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCATGCGGAAGCGGCGTaGCCAGCCCGTGTCACACGT +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPHAEAA*PARVTR
Trigger: ACGTGTGACACGGGCTGGCAACGCCGCTTCCGCATG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGAGCTCTGGAAGGCCTaGAGAGCGTCGCCCACGAGG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPELWKA*RASPTR
Trigger: CCTCGTGGGCGACGCTCTCAAGGCCTTCCAGAGCTC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCTCAGGCCGGGCCCTaGGGGCCTCCTCACCCGCTG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPQAGP*GPPHPL
Trigger: CAGCGGGTGAGGAGGCCCCAAGGGCCCGGCCTGAGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTCCTGGCTCTGGTACTaGGCGGGCGCTGGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSWLWY*AGAGCW
Trigger: CCAACACCCAGCGCCCGCCAAGTACCAGAGCCAGGA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp CACGTGGCCCAGGCTGGACCCGCCACACTGCATTTCCGGCTGCGCTaGTGGGTCCCATTGGCACAAGATGATGAGCATGGGCCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: HVAQAGPATLHFRLR*WVPLAQDDEHGPQG
Trigger: TCCCTGGGGCCCATGCTCATCATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTGTGGCGGGTCCAGCCTGGGCCACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp CGGGCAATCGAGATTGCTGCACTCACGGGTATCCGTGAGGGCACCTaGGCACGTGGCCCAGGCTGGACCCGCCACACTGCATTTCCGGCT +
Preference number: 5 (lower is better)
Translates to: RAIEIAALTGIREGT*ARGPGWTRHTAFPA
Trigger: AGCCGGAAATGCAGTGTGGCGGGTCCAGCCTGGGCCACGTGCGCAGGTGCCCTCACGGATACCCGTGAGTGCAGCAATCTCGATTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp CTCTGGCCGTCCCACCTCCGACTCAGCCCGGGCTGTGGCTTCCTCTaGACCAGGCCGCAGGCAGGTAAAGTTGACCAGGTAGTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: LWPSHLRLSPGCGFL*TRPQAGKVDQVVVQ
Trigger: CTGGACCACTACCTGGTCAACTTTACCTGCCTGCGGCCTGGTCCAGAGGAAGCCACAGCCCGGGCTGAGTCGGAGGTGGGACGGCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp TGCCGCAGGCCACCCTCCCCACACATGTACACAGGGTTGGTCTCCTaGGGTGGTGGTGGCTCCCCTAGACCTGGTGAGGCTGCCATGGGT +
Preference number: 5 (lower is better)
Translates to: CRRPPSPHMYTGLVS*GGGGSPRPGEAAMG
Trigger: ACCCATGGCAGCCTCACCAGGTCTAGGGGAGCCACCACCACCCCAGGAGACCAACCCTGTGTACATGTGTGGGGAGGGTGGCCTGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCATGGTGCATACGCCCTaGCTCAGCACCCGGGACTGG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPMVHTP*LSTRDW
Trigger: CCAGTCCCGGGTGCTGAGCAAGGGCGTATGCACCAT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGGCTGGGTTTCTCCTaGGCTGAGGACTGGCTACGG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGLGFS*AEDWLR
Trigger: CCGTAGCCAGTCCTCAGCCAAGGAGAAACCCAGCCC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp CCCAGGACAACTACACCCTGGCTGTGCAAAGCCACAAGCCCTGCCTaGAGCCCGGCCACACTCCTCACTCCAGCGGCAGAGCACACCACA +
Preference number: 5 (lower is better)
Translates to: PRTTTPWLCKATSPA*SPATLLTPAAEHTT
Trigger: TGTGGTGTGCTCTGCCGCTGGAGTGAGGAGTGTGGCCGGGCTGCAGGCAGGGCTTGTGGCTTTGCACAGCCAGGGTGTAGTTGTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp CTGTGCCCTCGCAAGGGTAGCCCTGTGTGCCAGAAGCCTGGCACATaGGGAAGCGGCGTTGCCAGCCCGTGTCACACGTCTTGGAGCACA +
Preference number: 5 (lower is better)
Translates to: LCPRKGSPVCQKPGT*GSGVASPCHTSWST
Trigger: TGTGCTCCAAGACGTGTGACACGGGCTGGCAACGCCGCTTCCGCATGTGCCAGGCTTCTGGCACACAGGGCTACCCTTGCGAGGGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp AGGGTTTCACCTCCTCTCCTGTGCCCTCGCAAGGGTAGCCCTGTGTaGCAGAAGCCTGGCACATGCGGAAGCGGCGTTGCCAGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: RVSPPLLCPRKGSPV*QKPGTCGSGVASPC
Trigger: ACACGGGCTGGCAACGCCGCTTCCGCATGTGCCAGGCTTCTGGCACACAGGGCTACCCTTGCGAGGGCACAGGAGAGGAGGTGAAACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCAGGTGGCTGAATTGTaGCAAGGCCGGGTCTCCCGA +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPQVAEL*QGRVSR
Trigger: TCGGGAGACCCGGCCTTGCAACAATTCAGCCACCTG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGCAGCTGCCCGTTCTaGCACGAGTCTGGGGAGTCT +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCSCPF*HESGES
Trigger: AGACTCCCCAGACTCGTGCAAGAACGGGCAGCTGCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCCCACGAGACAGGACTaGGGCTCCTCATCCTCATCC +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPPTRQD*GSSSSS
Trigger: GGATGAGGATGAGGAGCCCAAGTCCTGTCTCGTGGG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp CTCCTGCCGGTTGAAGCGCAGGTAGAGGGAGTACTTGGTGGGGTCTaGGTTCTCCAGGGTCCAGGAGCAGCCCGAGGCGATGGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LLPVEAQVEGVLGGV*VLQGPGAARGDGGK
Trigger: TTTCCCACCATCGCCTCGGGCTGCTCCTGGACCCTGGAGAACCCAGACCCCACCAAGTACTCCCTCTACCTGCGCTTCAACCGGCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp CTGGACCCGCCACACTGCATTTCCGGCTGCGCTGCTGGGTCCCATTaGCACAAGATGATGAGCATGGGCCCCAGGGACCCCATTCTAGCC +
Preference number: 5 (lower is better)
Translates to: LDPPHCISGCAAGSH*HKMMSMGPRDPILA
Trigger: GGCTAGAATGGGGTCCCTGGGGCCCATGCTCATCATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTGTGGCGGGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGTGGTGAACAGGTCATaGCTGCTCCCCGAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPVVNRS*LLPECK
Trigger: CTTGCACTCGGGGAGCAGCAATGACCTGTTCACCAC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCACATGTACACAGGGTaGGTCTCCTGGGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPHMYTG*VSWGGG
Trigger: ACCACCACCCCAGGAGACCAACCCTGTGTACATGTG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCGGGCGCTGGGTGTaGGTGGTGGTGGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGGRWV*VVVVGR
Trigger: CCTTCCAACCACCACCACCAACACCCAGCGCCCGCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGCTCATCTGCAGACCTaGGCCACTGGGTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPAHLQT*ATGFSP
Trigger: AGGTGAAAACCCAGTGGCCAAGGTCTGCAGATGAGC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCCGTGTCACACGTCTaGGAGCACAGGCTCCACGCG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPVSHV*EHRLHA
Trigger: CGCGTGGAGCCTGTGCTCCAAGACGTGTGACACGGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCATGCGGAAGCGGCGTaGCCAGCCCGTGTCACACGT +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPHAEAA*PARVTR
Trigger: ACGTGTGACACGGGCTGGCAACGCCGCTTCCGCATG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGGCTGAGCACCTCCTaGGGTAGAAAGAGACGATCC +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRLSTS*GRKRRS
Trigger: GGATCGTCTCTTTCTACCCAAGGAGGTGCTCAGCCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGTAATGGTGGACGGGTaGCAGGTGTTGACCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPVMVDG*QVLTSL
Trigger: CAAGGAGGTCAACACCTGCAACCCGTCCACCATTAC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTCCTGGCTCTGGTACTaGGCGGGCGCTGGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSWLWY*AGAGCW
Trigger: CCAACACCCAGCGCCCGCCAAGTACCAGAGCCAGGA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS TCA 90 bp CTGTGGCTGCCCCAGGTGTGGCTGGCTTTCCTGGGGAGGACAGGCTaGGCACCTCCTTGGGTAGAAAGAGACGATCCTCTGAGTGTCGCA +
Preference number: 5 (lower is better)
Translates to: LWLPQVWLAFLGRTG*APPWVERDDPLSVA
Trigger: TGCGACACTCAGAGGATCGTCTCTTTCTACCCAAGGAGGTGCTCAGCCTGTCCTCCCCAGGAAAGCCAGCCACACCTGGGGCAGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp CAAGGTCTGGCAGCTCTCAGTGTTCCAGTCCCCCGAGTTGGTATCTaGTCTGGAGTAGTCCCAGCTGGCACAGTGGGGATCGGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: QGLAALSVPVPRVGI*SGVVPAGTVGIGGA
Trigger: GGCACCACCGATCCCCACTGTGCCAGCTGGGACTACTCCAGAGCAGATACCAACTCGGGGGACTGGAACACTGAGAGCTGCCAGACCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp GGGTCTCCAAGGTCTGGCAGCTCTCAGTGTTCCAGTCCCCCGAGTTaGTATCTGCTCTGGAGTAGTCCCAGCTGGCACAGTGGGGATCGG +
Preference number: 5 (lower is better)
Translates to: GSPRSGSSQCSSPPS*YLLWSSPSWHSGDR
Trigger: CCGATCCCCACTGTGCCAGCTGGGACTACTCCAGAGCAGATACCAACTCGGGGGACTGGAACACTGAGAGCTGCCAGACCTTGGAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp GCTCAAAGTCCGCCGGGGCAGAACCATGTAGTCCCCCTCAGAGCCTaGTTCACTCTGCCGTATCCATGTAAGGTCCAACTGCCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: AQSPPGQNHVVPLRA*FTLPYPCKVQLPQA
Trigger: GGCCTGCGGCAGTTGGACCTTACATGGATACGGCAGAGTGAACCAGGCTCTGAGGGGGACTACATGGTTCTGCCCCGGCGGACTTTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTATGGTGCATACGCCCTaGCTCAGCACCCGGGACTGG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPMVHTP*LSTRDW
Trigger: CCAGTCCCGGGTGCTGAGCAAGGGCGTATGCACCAT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGACGGGTTGCAGGTGTaGACCTCCTTGAACAGAACT +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPDGLQV*TSLNRT
Trigger: AGTTCTGTTCAAGGAGGTCAACACCTGCAACCCGTC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGTTGGTGGTGGTGGTaGGAAGGTCATTCCATACGG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPCWWWW*EGHSIR
Trigger: CCGTATGGAATGACCTTCCAACCACCACCACCAACA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGGCTGGGTTTCTCCTaGGCTGAGGACTGGCTACGG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGLGFS*AEDWLR
Trigger: CCGTAGCCAGTCCTCAGCCAAGGAGAAACCCAGCCC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp TCCTTAGGATGTCCACAGAGAAGAGCAGGTCCCCGCTGTAGTAAGTaGGCCGTGCCAGTAGCTCCTGCAGGCTCCGCACCACCTGTGACA +
Preference number: 5 (lower is better)
Translates to: SLGCPQRRAGPRCSK*AVPVAPAGSAPPVT
Trigger: TGTCACAGGTGGTGCGGAGCCTGCAGGAGCTACTGGCACGGCGCACTTACTACAGCGGGGACCTGCTCTTCTCTGTGGACATCCTAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp CCCTCAGAGCCTGGTTCACTCTGCCGTATCCATGTAAGGTCCAACTaGCGCAGGCCACCCTCCCCACACATGTACACAGGGTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PSEPGSLCRIHVRSN*RRPPSPHMYTGLVS
Trigger: GGAGACCAACCCTGTGTACATGTGTGGGGAGGGTGGCCTGCGGCAGTTGGACCTTACATGGATACGGCAGAGTGAACCAGGCTCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp GATATGCAACGAGCAAAGCTGGGCAGTCCCCAGTATGCTACGCCCTaGGCACTGAGGAGACAGCGGCGGCTAGCAGAACCCGAGGCATTA +
Preference number: 5 (lower is better)
Translates to: DMQRAKLGSPQYATP*ALRRQRRLAEPEAL
Trigger: TAATGCCTCGGGTTCTGCTAGCCGCCGCTGTCTCCTCAGTGCCCAGGGCGTAGCATACTGGGGACTGCCCAGCTTTGCTCGTTGCATATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp CCGGCTACGTTCTCCTGGCTCTGGTACTTGGCGGGCGCTGGGTGTTaGTGGTGGTGGTTGGAAGGTCATTCCATACGGGTTCTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: PATFSWLWYLAGAGC*WWWLEGHSIRVLER
Trigger: TCTCTCCAGAACCCGTATGGAATGACCTTCCAACCACCACCACCAACACCCAGCGCCCGCCAAGTACCAGAGCCAGGAGAACGTAGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGGCTGGAGTTGTTGTaGTTGATCAGCAAGACCTCC +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPWLELL*LISKTS
Trigger: GGAGGTCTTGCTGATCAACAACAACAACTCCAGCCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCGAGCCATGAGCTTGTaGAAGACGATAATCCCGATG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPRAMSL*KTIIPM
Trigger: CATCGGGATTATCGTCTTCAACAAGCTCATGGCTCG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCCTCTGCTTCTTAGATTaGTCTGAGACGCCATCGCGA +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPLCFLD*SETPSR
Trigger: TCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAG...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAAGCCTTGTGCAGAGTaGAAAACGGCAAAGAGTGCC +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPKPCAE*KTAKSA
Trigger: GGCACTCTTTGCCGTTTTCAACTCTGCACAAGGCTT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGGTGATGACAAAGCCTaGTGCAGAGTTGAAAACGGC +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPGDDKA*CRVENG
Trigger: GCCGTTTTCAACTCTGCACAAGGCTTTGTCATCACC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCCCACGAGACAGGACTaGGGCTCCTCATCCTCATCC +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPPTRQD*GSSSSS
Trigger: GGATGAGGATGAGGAGCCCAAGTCCTGTCTCGTGGG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp GCTAGCAGACGAGGGGCCTCAGAGGGCTCAGCCGACAGGCACAGCTaGACAAAGTTCTTGTCGAAGTGCAGAAAGGTAAAGGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: ASRRGASEGSADRHS*TKFLSKCRKVKGPE
Trigger: CTCAGGCCCCTTTACCTTTCTGCACTTCGACAAGAACTTTGTGCAGCTGTGCCTGTCGGCTGAGCCCTCTGAGGCCCCTCGTCTGCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp GTATTCATGGGATATGCAACGAGCAAAGCTGGGCAGTCCCCAGTATaGTACGCCCTGGGCACTGAGGAGACAGCGGCGGCTAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: VFMGYATSKAGQSPV*YALGTEETAAASRT
Trigger: GGTTCTGCTAGCCGCCGCTGTCTCCTCAGTGCCCAGGGCGTAGCATACTGGGGACTGCCCAGCTTTGCTCGTTGCATATCCCATGAATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGTGGTGAACAGGTCATaGCTGCTCCCCGAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPVVNRS*LLPECK
Trigger: CTTGCACTCGGGGAGCAGCAATGACCTGTTCACCAC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCACATGTACACAGGGTaGGTCTCCTGGGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPHMYTG*VSWGGG
Trigger: ACCACCACCCCAGGAGACCAACCCTGTGTACATGTG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTGGAAAAAGACACAGTaGAGAGCCATATCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPWKKTQ*RAISPE
Trigger: CTCTGGGGATATGGCTCTCAACTGTGTCTTTTTCCA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS TCA 90 bp CCAGGGGCACCGCTCCGACCCAGCCCTCTGCTTCTTAGATTTGTCTaGGACGCCATCGCGAGCCATGAGCTTGTTGAAGACGATAATCCC +
Preference number: 5 (lower is better)
Translates to: PGAPLRPSPLLLRFV*DAIASHELVEDDNP
Trigger: GGGATTATCGTCTTCAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAGGGCTGGGTCGGAGCGGTGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030571.7
ENSMUST00000106015.9
ENSMUST00000121049.8
CDS TCA 90 bp GAGTCTGGGGAGTCTTCACTCTCATCAGCCCGACACACACCCATCTaGCACTTTACCACATCCTGGACCTCTCGGCGCAGGAAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: ESGESSLSSARHTPI*HFTTSWTSRRRKQC
Trigger: GCACTGCTTCCTGCGCCGAGAGGTCCAGGATGTGGTAAAGTGTCAGATGGGTGTGTGTCGGGCTGATGAGAGTGAAGACTCCCCAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp CTCTCGGCGCAGGAAGCAGTGCACAGCGGTGATGACAAAGCCTTGTaGAGAGTTGAAAACGGCAAAGAGTGCCTGGAAGAGGACGGAGCG +
Preference number: 5 (lower is better)
Translates to: LSAQEAVHSGDDKAL*RVENGKECLEEDGA
Trigger: CGCTCCGTCCTCTTCCAGGCACTCTTTGCCGTTTTCAACTCTGCACAAGGCTTTGTCATCACCGCTGTGCACTGCTTCCTGCGCCGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAGCTGCACAAAGTTCTaGTCGAAGTGCAGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSCTKF*SKCRKV
Trigger: TACCTTTCTGCACTTCGACAAGAACTTTGTGCAGCT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGCTCATCTGCAGACCTaGGCCACTGGGTTTTCACCT +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPAHLQT*ATGFSP
Trigger: AGGTGAAAACCCAGTGGCCAAGGTCTGCAGATGAGC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGGCTGAGCACCTCCTaGGGTAGAAAGAGACGATCC +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRLSTS*GRKRRS
Trigger: GGATCGTCTCTTTCTACCCAAGGAGGTGCTCAGCCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCGATGTACCATATCCTTaGGTGCGAGTAAAGCCAACA +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPDVPYP*VRVKPT
Trigger: TGTTGGCTTTACTCGCACCAAAGGATATGGTACATC...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGTAATGGTGGACGGGTaGCAGGTGTTGACCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPVMVDG*QVLTSL
Trigger: CAAGGAGGTCAACACCTGCAACCCGTCCACCATTAC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCAAGCCCTTGGAAGCTTaGGAAAAAGACACAGTTGAG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPKPLEA*EKDTVE
Trigger: CTCAACTGTGTCTTTTTCCAAAGCTTCCAAGGGCTT...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS GCA 90 bp GGTGTTCCCGAAGTGACAGGTACAGGTAGCGGTATTCATGGGATATaGAACGAGCAAAGCTGGGCAGTCCCCAGTATGCTACGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GVPEVTGTGSGIHGI*NEQSWAVPSMLRPG
Trigger: CCCAGGGCGTAGCATACTGGGGACTGCCCAGCTTTGCTCGTTGCATATCCCATGAATACCGCTACCTGTACCTGTCACTTCGGGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 90 bp CGGCCACACTCCTCACTCCAGCGGCAGAGCACACCACAGGTGAACTaGCTGGAGTTGTTGTTGTTGATCAGCAAGACCTCCACAAAACGG +
Preference number: 5 (lower is better)
Translates to: RPHSSLQRQSTPQVN*LELLLLISKTSTKR
Trigger: CCGTTTTGTGGAGGTCTTGCTGATCAACAACAACAACTCCAGCCAGTTCACCTGTGGTGTGCTCTGCCGCTGGAGTGAGGAGTGTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGCCCCTCATCCCATTTGTCCTaGTTTTCTGAATCCACCATG +
Preference number: 5 (lower is better)
Translates to: RLQWVAKGPLRTRRGPGPSSHLS*FSESTM
Trigger: CATGGTGGATTCAGAAAACAAGGACAAATGGGATGA...GGGGCCAGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTCGCGAGCCATGAGCTaGTTGAAGACGATAATCCCG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSRAMS*LKTIIP
Trigger: CGGGATTATCGTCTTCAACAAGCTCATGGCTCGCGA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGACGGGTTGCAGGTGTaGACCTCCTTGAACAGAACT +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPDGLQV*TSLNRT
Trigger: AGTTCTGTTCAAGGAGGTCAACACCTGCAACCCGTC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGTTGGTGGTGGTGGTaGGAAGGTCATTCCATACGG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPCWWWW*EGHSIR
Trigger: CCGTATGGAATGACCTTCCAACCACCACCACCAACA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp CCACGTCCTTTTCAAAGTCTGACAGGATCTGCAGCTGCCCGTTCTTaGACGAGTCTGGGGAGTCTTCACTCTCATCAGCCCGACACACAC +
Preference number: 5 (lower is better)
Translates to: PRPFQSLTGSAAARS*TSLGSLHSHQPDTH
Trigger: GTGTGTGTCGGGCTGATGAGAGTGAAGACTCCCCAGACTCGTGCAAGAACGGGCAGCTGCAGATCCTGTCAGACTTTGAAAAGGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTGGCTGGAGTTGTTGTaGTTGATCAGCAAGACCTCC +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPWLELL*LISKTS
Trigger: GGAGGTCTTGCTGATCAACAACAACAACTCCAGCCA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCGAGCCATGAGCTTGTaGAAGACGATAATCCCGATG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPRAMSL*KTIIPM
Trigger: CATCGGGATTATCGTCTTCAACAAGCTCATGGCTCG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTCTCTGCTTCTTAGATTaGTCTGAGACGCCATCGCGA +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPLCFLD*SETPSR
Trigger: TCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAG...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAAGCCTTGTGCAGAGTaGAAAACGGCAAAGAGTGCC +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPKPCAE*KTAKSA
Trigger: GGCACTCTTTGCCGTTTTCAACTCTGCACAAGGCTT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGGTGATGACAAAGCCTaGTGCAGAGTTGAAAACGGC +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPGDDKA*CRVENG
Trigger: GCCGTTTTCAACTCTGCACAAGGCTTTGTCATCACC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 90 bp CAGCTGCCGCCCTCTTCCATGTCATCAACATCACGTACTCATCCCTaGACATCTCATGGAAGGCTGGACACCTCTTCTCACTGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: QLPPSSMSSTSRTHP*TSHGRLDTSSHCRV
Trigger: AACCCTGCAGTGAGAAGAGGTGTCCAGCCTTCCATGAGATGTGCAGGGATGAGTACGTGATGTTGATGACATGGAAGAGGGCGGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTCCAGAGTGAAGCCCTaGGAAGCTTTGGAAAAAGAC +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSRVKP*EALEKD
Trigger: GTCTTTTTCCAAAGCTTCCAAGGGCTTCACTCTGGA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS GCA 90 bp ACCCGAGGCATTAGGGGGACACTTGTTGTAAATGATCTCGCCAGCTaGCGCCCTCTTCCATGTCATCAACATCACGTACTCATCCCTGCA +
Preference number: 5 (lower is better)
Translates to: TRGIRGTLVVNDLAS*RPLPCHQHHVLIPA
Trigger: TGCAGGGATGAGTACGTGATGTTGATGACATGGAAGAGGGCGGCAGCTGGCGAGATCATTTACAACAAGTGTCCCCCTAATGCCTCGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTAGCTGCACAAAGTTCTaGTCGAAGTGCAGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSCTKF*SKCRKV
Trigger: TACCTTTCTGCACTTCGACAAGAACTTTGTGCAGCT...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTGATGTACCATATCCTTaGGTGCGAGTAAAGCCAACA +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPDVPYP*VRVKPT
Trigger: TGTTGGCTTTACTCGCACCAAAGGATATGGTACATC...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS TCA 90 bp GAGATTCCAAGACAGTCGGCCAGCCCTCTGCTTCTTAGATTTGTCTaGGACGCCATCGCGAGCCATGAGCTTGTTGAAGACGATAATCCC +
Preference number: 5 (lower is better)
Translates to: EIPRQSASPLLLRFV*DAIASHELVEDDNP
Trigger: GGGATTATCGTCTTCAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAGGGCTGGCCGACTGTCTTGGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS TCA 90 bp GAACTCCAGAGTGAAGCCCTTGGAAGCTTTGGAAAAAGACACAGTTaGGAGCCATATCCCCAGAGATTCCAAGACAGTCGGCCAGCCCTC +
Preference number: 5 (lower is better)
Translates to: ELQSEALGSFGKRHS*EPYPQRFQDSRPAL
Trigger: GAGGGCTGGCCGACTGTCTTGGAATCTCTGGGGATATGGCTCTCAACTGTGTCTTTTTCCAAAGCTTCCAAGGGCTTCACTCTGGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS-3UTR CAA 90 bp AAGATGAGGCTCCAGTGGGTGGCTAAGGGACCTCTGAGAACAAGGAGGGGCCCTTCATCCCATTTGTCCTaGTTTTCTGAATCCACCATG +
Preference number: 5 (lower is better)
Translates to: KMRLQWVAKGPLRTRRGPSSHLS*FSESTM
Trigger: CATGGTGGATTCAGAAAACAAGGACAAATGGGATGA...AGGGCCCCTCCTTGTTCTCAGAGGTCCCTTAGCCACCCACTGGAGCCTCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp CGTAGAGCACGCCCGAGGCCAGGGCAGAGCAGGCACTaGGGGCAGGGTCGAAGGCCGTGGCCAGGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: RRARPRPGQSRH*GQGRRPWPGAG
Trigger: CCCTGCGCCTGGCCACGGCCTTCGACCCTGCCCCCAGTGCCTGCTCTGCCCTGGCCTCGGGCGTGCTCTACG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp GAGGACTCTTCGGGGTCAGCTGGGAGAAGGCGCTGGTaGGCGTGGCCTGGGCCAGGGGGCACCGTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: EDSSGSAGRRRW*AWPGPGGTVPG
Trigger: CCCAGGAACGGTGCCCCCTGGCCCAGGCCACGCCCACCAGCGCCTTCTCCCAGCTGACCCCGAAGAGTCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp GAGGAGGACTCTTCGGGGTCAGCTGGGAGAAGGCGCTaGTGGGCGTGGCCTGGGCCAGGGGGCACCGTTCCT +
Preference number: 6 (lower is better)
Translates to: EEDSSGSAGRRR*WAWPGPGGTVP
Trigger: AGGAACGGTGCCCCCTGGCCCAGGCCACGCCCACCAGCGCCTTCTCCCAGCTGACCCCGAAGAGTCCTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp CACCTGCGCACGTGGCCCAGGCTGGACCCGCCACACTaGATTTCCGGCTGCGCTGCTGGGTCCCATTGGCAC +
Preference number: 6 (lower is better)
Translates to: HLRTWPRLDPPH*ISGCAAGSHWH
Trigger: GTGCCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTGTGGCGGGTCCAGCCTGGGCCACGTGCGCAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp GCCTGGCACATGCGGAAGCGGCGTTGCCAGCCCGTGTCACACGTCTaGGAGCACAGGCTCCACGCGTTCCACGGCCCCCACTTGCCGTCA +
Preference number: 6 (lower is better)
Translates to: AWHMRKRRCQPVSHV*EHRLHAFHGPHLPS
Trigger: TGACGGCAAGTGGGGGCCGTGGAACGCGTGGAGCCTGTGCTCCAAGACGTGTGACACGGGCTGGCAACGCCGCTTCCGCATGTGCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS TCA 72 bp CCGGGCAATCGAGATTGCTGCACTCACGGGTATCCGTaGGGGCACCTGCGCACGTGGCCCAGGCTGGACCCG +
Preference number: 6 (lower is better)
Translates to: PGNRDCCTHGYP*GHLRTWPRLDP
Trigger: CGGGTCCAGCCTGGGCCACGTGCGCAGGTGCCCTCACGGATACCCGTGAGTGCAGCAATCTCGATTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp GGCCCCTGCCTCCCCAGGACAACTACACCCTGGCTGTaGAAAGCCACAAGCCCTGCCTGCAGCCCGGCCACA +
Preference number: 6 (lower is better)
Translates to: GPCLPRTTTPWL*KATSPACSPAT
Trigger: TGTGGCCGGGCTGCAGGCAGGGCTTGTGGCTTTGCACAGCCAGGGTGTAGTTGTCCTGGGGAGGCAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp CCCACACGCCGTGCACTGGGCAGGTGGCTGAATTGTTaGAAGGCCGGGTCTCCCGAAGGGGCCCGCTGCACA +
Preference number: 6 (lower is better)
Translates to: PTRRALGRWLNC*KAGSPEGARCT
Trigger: TGTGCAGCGGGCCCCTTCGGGAGACCCGGCCTTGCAACAATTCAGCCACCTGCCCAGTGCACGGCGTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
CDS GCA 72 bp TCCACCGGGCAGGCGGCCATACTGCAGAGTTTAGTCTaGAGCTCGGGACCCTCGCAGGCCTTGCCGCCGTGC +
Preference number: 6 (lower is better)
Translates to: STGQAAILQSLV*SSGPSQALPPC
Trigger: GCACGGCGGCAAGGCCTGCGAGGGTCCCGAGCTGCAGACTAAACTCTGCAGTATGGCCGCCTGCCCGGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000121049.8
CDS CCA 72 bp TGCGGAAGCGGCGTTGCCAGCCCGTGTCACACGTCTTaGAGCACAGGCTCCACGCGTTCCACGGCCCCCACT +
Preference number: 6 (lower is better)
Translates to: CGSGVASPCHTS*STGSTRSTAPT
Trigger: AGTGGGGGCCGTGGAACGCGTGGAGCCTGTGCTCCAAGACGTGTGACACGGGCTGGCAACGCCGCTTCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp TCAGGTCCTTGGGTGGCTGGGCCAGGACGGCAAAGGTaGACAGGTGCTGGCACTGGCAGCGGGTGTGAGCCG +
Preference number: 6 (lower is better)
Translates to: SGPWVAGPGRQR*TGAGTGSGCEP
Trigger: CGGCTCACACCCGCTGCCAGTGCCAGCACCTGTCCACCTTTGCCGTCCTGGCCCAGCCACCCAAGGACCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp TCCCACACGCCGTGCACTGGGCAGGTGGCTGAATTGTaGCAAGGCCGGGTCTCCCGAAGGGGCCCGCTGCAC +
Preference number: 6 (lower is better)
Translates to: SHTPCTGQVAEL*QGRVSRRGPLH
Trigger: GTGCAGCGGGCCCCTTCGGGAGACCCGGCCTTGCAACAATTCAGCCACCTGCCCAGTGCACGGCGTGTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
CDS CAA 72 bp ATGCGGAAGCGGCGTTGCCAGCCCGTGTCACACGTCTaGGAGCACAGGCTCCACGCGTTCCACGGCCCCCAC +
Preference number: 6 (lower is better)
Translates to: MRKRRCQPVSHV*EHRLHAFHGPH
Trigger: GTGGGGGCCGTGGAACGCGTGGAGCCTGTGCTCCAAGACGTGTGACACGGGCTGGCAACGCCGCTTCCGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp GAGATTGCTGCACTCACGGGTATCCGTGAGGGCACCTaGGCACGTGGCCCAGGCTGGACCCGCCACACTGCA +
Preference number: 6 (lower is better)
Translates to: EIAALTGIREGT*ARGPGWTRHTA
Trigger: TGCAGTGTGGCGGGTCCAGCCTGGGCCACGTGCGCAGGTGCCCTCACGGATACCCGTGAGTGCAGCAATCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp CCTCCTCTCCTGTGCCCTCGCAAGGGTAGCCCTGTGTaGCAGAAGCCTGGCACATGCGGAAGCGGCGTTGCC +
Preference number: 6 (lower is better)
Translates to: PPLLCPRKGSPV*QKPGTCGSGVA
Trigger: GGCAACGCCGCTTCCGCATGTGCCAGGCTTCTGGCACACAGGGCTACCCTTGCGAGGGCACAGGAGAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp GGCCCCCACTTGCCGTCAGTGGCCGGGCAATCGAGATaGCTGCACTCACGGGTATCCGTGAGGGCACCTGCG +
Preference number: 6 (lower is better)
Translates to: GPHLPSVAGQSR*LHSRVSVRAPA
Trigger: CGCAGGTGCCCTCACGGATACCCGTGAGTGCAGCAATCTCGATTGCCCGGCCACTGACGGCAAGTGGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS TCA 72 bp GCAAAGGTGGACAGGTGCTGGCACTGGCAGCGGGTGTaGGCCGCCTGGGTCTCCAAGGTCTGGCAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: AKVDRCWHWQRV*AAWVSKVWQLS
Trigger: TGAGAGCTGCCAGACCTTGGAGACCCAGGCGGCTCACACCCGCTGCCAGTGCCAGCACCTGTCCACCTTTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp ACTACACCCTGGCTGTGCAAAGCCACAAGCCCTGCCTaGAGCCCGGCCACACTCCTCACTCCAGCGGCAGAG +
Preference number: 6 (lower is better)
Translates to: TTPWLCKATSPA*SPATLLTPAAE
Trigger: CTCTGCCGCTGGAGTGAGGAGTGTGGCCGGGCTGCAGGCAGGGCTTGTGGCTTTGCACAGCCAGGGTGTAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp TGGAGCACAGGCTCCACGCGTTCCACGGCCCCCACTTaGCGTCAGTGGCCGGGCAATCGAGATTGCTGCACT +
Preference number: 6 (lower is better)
Translates to: WSTGSTRSTAPT*RQWPGNRDCCT
Trigger: AGTGCAGCAATCTCGATTGCCCGGCCACTGACGGCAAGTGGGGGCCGTGGAACGCGTGGAGCCTGTGCTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp CGCAAGGGTAGCCCTGTGTGCCAGAAGCCTGGCACATaGGGAAGCGGCGTTGCCAGCCCGTGTCACACGTCT +
Preference number: 6 (lower is better)
Translates to: RKGSPVCQKPGT*GSGVASPCHTS
Trigger: AGACGTGTGACACGGGCTGGCAACGCCGCTTCCGCATGTGCCAGGCTTCTGGCACACAGGGCTACCCTTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp AGGCTGGCCCAGGGGCACCGCTCCGACCCAGCCCTCTaGTTCTTAGATTTGTCTGAGACGCCATCGCGAGCC +
Preference number: 6 (lower is better)
Translates to: RLAQGHRSDPAL*FLDLSETPSRA
Trigger: GGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAGGGCTGGGTCGGAGCGGTGCCCCTGGGCCAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030571.7
ENSMUST00000106015.9
ENSMUST00000121049.8
CDS CCA 72 bp GATGAGCATGGGCCCCAGGGACCCCATTCTAGCCACTaGCCTTCCACCGGGCAGGCGGCCATACTGCAGAGT +
Preference number: 6 (lower is better)
Translates to: DEHGPQGPHSSH*PSTGQAAILQS
Trigger: ACTCTGCAGTATGGCCGCCTGCCCGGTGGAAGGCCAGTGGCTAGAATGGGGTCCCTGGGGCCCATGCTCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000121049.8
CDS CCA 72 bp CGAGCAAAGCTGGGCAGTCCCCAGTATGCTACGCCCTaGGCACTGAGGAGACAGCGGCGGCTAGCAGAACCC +
Preference number: 6 (lower is better)
Translates to: RAKLGSPQYATP*ALRRQRRLAEP
Trigger: GGGTTCTGCTAGCCGCCGCTGTCTCCTCAGTGCCCAGGGCGTAGCATACTGGGGACTGCCCAGCTTTGCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp AGGCACTGTACGGGGCATGGTCCGGCTACGTTCTCCTaGCTCTGGTACTTGGCGGGCGCTGGGTGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: RHCTGHGPATFS*LWYLAGAGCWW
Trigger: CCACCAACACCCAGCGCCCGCCAAGTACCAGAGCCAGGAGAACGTAGCCGGACCATGCCCCGTACAGTGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp TTGGAGCACAGGCTCCACGCGTTCCACGGCCCCCACTaGCCGTCAGTGGCCGGGCAATCGAGATTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: LEHRLHAFHGPH*PSVAGQSRLLH
Trigger: GTGCAGCAATCTCGATTGCCCGGCCACTGACGGCAAGTGGGGGCCGTGGAACGCGTGGAGCCTGTGCTCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp AGGGTAGCCCTGTGTGCCAGAAGCCTGGCACATGCGGAAGCGGCGTaGCCAGCCCGTGTCACACGTCTTGGAGCACAGGCTCCACGCGTT +
Preference number: 6 (lower is better)
Translates to: RVALCARSLAHAEAA*PARVTRLGAQAPRV
Trigger: AACGCGTGGAGCCTGTGCTCCAAGACGTGTGACACGGGCTGGCAACGCCGCTTCCGCATGTGCCAGGCTTCTGGCACACAGGGCTACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp TGGCCCAGGCTGGACCCGCCACACTGCATTTCCGGCTaGGCTGCTGGGTCCCATTGGCACAAGATGATGAGC +
Preference number: 6 (lower is better)
Translates to: WPRLDPPHCISG*AAGSHWHKMMS
Trigger: GCTCATCATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTGTGGCGGGTCCAGCCTGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp TGTGTGCCAGAAGCCTGGCACATGCGGAAGCGGCGTTaGCAGCCCGTGTCACACGTCTTGGAGCACAGGCTC +
Preference number: 6 (lower is better)
Translates to: CVPEAWHMRKRR*QPVSHVLEHRL
Trigger: GAGCCTGTGCTCCAAGACGTGTGACACGGGCTGGCAACGCCGCTTCCGCATGTGCCAGGCTTCTGGCACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp CCACACTGCATTTCCGGCTGCGCTGCTGGGTCCCATTaGCACAAGATGATGAGCATGGGCCCCAGGGACCCC +
Preference number: 6 (lower is better)
Translates to: PHCISGCAAGSH*HKMMSMGPRDP
Trigger: GGGGTCCCTGGGGCCCATGCTCATCATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp CCACCCTCCCCACACATGTACACAGGGTTGGTCTCCTaGGGTGGTGGTGGCTCCCCTAGACCTGGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: PPSPHMYTGLVS*GGGGSPRPGEA
Trigger: AGCCTCACCAGGTCTAGGGGAGCCACCACCACCCCAGGAGACCAACCCTGTGTACATGTGTGGGGAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp GCCACACTGCATTTCCGGCTGCGCTGCTGGGTCCCATaGGCACAAGATGATGAGCATGGGCCCCAGGGACCC +
Preference number: 6 (lower is better)
Translates to: ATLHFRLRCWVP*AQDDEHGPQGP
Trigger: GGGTCCCTGGGGCCCATGCTCATCATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp CTGTGTGCCAGAAGCCTGGCACATGCGGAAGCGGCGTaGCCAGCCCGTGTCACACGTCTTGGAGCACAGGCT +
Preference number: 6 (lower is better)
Translates to: LCARSLAHAEAA*PARVTRLGAQA
Trigger: AGCCTGTGCTCCAAGACGTGTGACACGGGCTGGCAACGCCGCTTCCGCATGTGCCAGGCTTCTGGCACACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp GCTGGACCCGCCACACTGCATTTCCGGCTGCGCTGCTGGGTCCCATaGGCACAAGATGATGAGCATGGGCCCCAGGGACCCCATTCTAGC +
Preference number: 6 (lower is better)
Translates to: AGPATLHFRLRCWVP*AQDDEHGPQGPHSS
Trigger: GCTAGAATGGGGTCCCTGGGGCCCATGCTCATCATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTGTGGCGGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp AGTGGTGAGAAGCTGAGGCCACCCTCAGGACCCACGAGACAGGACTaGGGCTCCTCATCCTCATCCAGAGACAGGCGGGACAGAGTGCCG +
Preference number: 6 (lower is better)
Translates to: SGEKLRPPSGPTRQD*GSSSSSRDRRDRVP
Trigger: CGGCACTCTGTCCCGCCTGTCTCTGGATGAGGATGAGGAGCCCAAGTCCTGTCTCGTGGGTCCTGAGGGTGGCCTCAGCTTCTCACCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp CACTGTACGGGGCATGGTCCGGCTACGTTCTCCTGGCTCTGGTACTaGGCGGGCGCTGGGTGTTGGTGGTGGTGGTTGGAAGGTCATTCC +
Preference number: 6 (lower is better)
Translates to: HCTGHGPATFSWLWY*AGAGCWWWWLEGHS
Trigger: GGAATGACCTTCCAACCACCACCACCAACACCCAGCGCCCGCCAAGTACCAGAGCCAGGAGAACGTAGCCGGACCATGCCCCGTACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp CAGGCTGGACCCGCCACACTGCATTTCCGGCTGCGCTaGTGGGTCCCATTGGCACAAGATGATGAGCATGGG +
Preference number: 6 (lower is better)
Translates to: QAGPATLHFRLR*WVPLAQDDEHG
Trigger: CCCATGCTCATCATCTTGTGCCAATGGGACCCAGCAGCGCAGCCGGAAATGCAGTGTGGCGGGTCCAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp GGATATGCAACGAGCAAAGCTGGGCAGTCCCCAGTATaGTACGCCCTGGGCACTGAGGAGACAGCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: GYATSKAGQSPV*YALGTEETAAA
Trigger: AGCCGCCGCTGTCTCCTCAGTGCCCAGGGCGTAGCATACTGGGGACTGCCCAGCTTTGCTCGTTGCATATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp GTGGTGGTGGCTCCCCTAGACCTGGTGAGGCTGCCATaGGTACCAGGATGTTCCCAGGCAGTGGTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: VVVAPLDLVRLP*VPGCSQAVVRS
Trigger: GCTTCTCACCACTGCCTGGGAACATCCTGGTACCCATGGCAGCCTCACCAGGTCTAGGGGAGCCACCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp AAGCTGAGGCCACCCTCAGGACCCACGAGACAGGACTaGGGCTCCTCATCCTCATCCAGAGACAGGCGGGAC +
Preference number: 6 (lower is better)
Translates to: KLRPPSGPTRQD*GSSSSSRDRRD
Trigger: GTCCCGCCTGTCTCTGGATGAGGATGAGGAGCCCAAGTCCTGTCTCGTGGGTCCTGAGGGTGGCCTCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp TCTTCCGGCTCCTCACCATATCTCATCTCGGTGGTGAACAGGTCATaGCTGCTCCCCGAGTGCAAGTCGGCCTCAGCAGGAGGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SSGSSPYLISVVNRS*LLPECKSASAGGAG
Trigger: CCCAGCCCCTCCTGCTGAGGCCGACTTGCACTCGGGGAGCAGCAATGACCTGTTCACCACCGAGATGAGATATGGTGAGGAGCCGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS TCA 72 bp GCGGGGCAAAGTGTGTGCAAACCTGCTCCTGCCGGTTaGAGCGCAGGTAGAGGGAGTACTTGGTGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: AGQSVCKPAPAG*SAGRGSTWWGL
Trigger: CAGACCCCACCAAGTACTCCCTCTACCTGCGCTTCAACCGGCAGGAGCAGGTTTGCACACACTTTGCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp CCAGCCCTAGACCCGAGTGCTCCACAGACAGGAAGCTaGGGTAGCCTTCAGTGTGGGCTACCGTTTTGGCAG +
Preference number: 6 (lower is better)
Translates to: PALDPSAPQTGS*GSLQCGLPFWQ
Trigger: CTGCCAAAACGGTAGCCCACACTGAAGGCTACCCCAGCTTCCTGTCTGTGGAGCACTCGGGTCTAGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp CCAGCTTCATGGTGGAACCAGGCACTGTACGGGGCATaGTCCGGCTACGTTCTCCTGGCTCTGGTACTTGGC +
Preference number: 6 (lower is better)
Translates to: PASWWNQALYGA*SGYVLLALVLG
Trigger: GCCAAGTACCAGAGCCAGGAGAACGTAGCCGGACCATGCCCCGTACAGTGCCTGGTTCCACCATGAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp GGTCGCCTGTCTGCGCCATGTATAGCCCAGGCTCATCTGCAGACCTaGGCCACTGGGTTTTCACCTTCGGTTCCTCTTCCGGCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: GRLSAPCIAQAHLQT*ATGFSPSVPLPAPH
Trigger: GTGAGGAGCCGGAAGAGGAACCGAAGGTGAAAACCCAGTGGCCAAGGTCTGCAGATGAGCCTGGGCTATACATGGCGCAGACAGGCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000120204.8
CDS CAA 90 bp CCAGGTGTGGCTGGCTTTCCTGGGGAGGACAGGCTGAGCACCTCCTaGGGTAGAAAGAGACGATCCTCTGAGTGTCGCACCCAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: PGVAGFPGEDRLSTS*GRKRRSSECRTQSF
Trigger: GAAGGACTGGGTGCGACACTCAGAGGATCGTCTCTTTCTACCCAAGGAGGTGCTCAGCCTGTCCTCCCCAGGAAAGCCAGCCACACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp GCAGCTCTCAGTGTTCCAGTCCCCCGAGTTGGTATCTaGTCTGGAGTAGTCCCAGCTGGCACAGTGGGGATC +
Preference number: 6 (lower is better)
Translates to: AALSVPVPRVGI*SGVVPAGTVGI
Trigger: GATCCCCACTGTGCCAGCTGGGACTACTCCAGAGCAGATACCAACTCGGGGGACTGGAACACTGAGAGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp CCTGGTTCACTCTGCCGTATCCATGTAAGGTCCAACTaGCGCAGGCCACCCTCCCCACACATGTACACAGGG +
Preference number: 6 (lower is better)
Translates to: PGSLCRIHVRSN*RRPPSPHMYTG
Trigger: CCCTGTGTACATGTGTGGGGAGGGTGGCCTGCGGCAGTTGGACCTTACATGGATACGGCAGAGTGAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp GTCATGGTGCATACGCCCTTGCTCAGCACCCGGGACTaGCCCACCAGGATCAGAATGTTGGAAGCCAGGATG +
Preference number: 6 (lower is better)
Translates to: VMVHTPLLSTRD*PTRIRMLEARM
Trigger: CATCCTGGCTTCCAACATTCTGATCCTGGTGGGCCAGTCCCGGGTGCTGAGCAAGGGCGTATGCACCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp CCGCCGGGGCAGAACCATGTAGTCCCCCTCAGAGCCTaGTTCACTCTGCCGTATCCATGTAAGGTCCAACTG +
Preference number: 6 (lower is better)
Translates to: PPGQNHVVPLRA*FTLPYPCKVQL
Trigger: CAGTTGGACCTTACATGGATACGGCAGAGTGAACCAGGCTCTGAGGGGGACTACATGGTTCTGCCCCGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp GGGCACCGCTCCGACCCAGCCCTCTGCTTCTTAGATTaGTCTGAGACGCCATCGCGAGCCATGAGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: GHRSDPALCFLD*SETPSRAMSLL
Trigger: CAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAGGGCTGGGTCGGAGCGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030571.7
ENSMUST00000106015.9
ENSMUST00000121049.8
CDS CAA 72 bp CTGGGTTTCTCCTGTGAAAGGAGCAGGGCGAGCCTGTaGCACCCTCTCATCCACCTCACCTTGGCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: LGFSCERSRASL*HPLIHLTLAED
Trigger: GTCCTCAGCCAAGGTGAGGTGGATGAGAGGGTGCAACAGGCTCGCCCTGCTCCTTTCACAGGAGAAACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106018.9
CDS CAA 90 bp GGGGCCTCAGAGGGCTCAGCCGACAGGCACAGCTGCACAAAGTTCTaGTCGAAGTGCAGAAAGGTAAAGGGGCCTGAGCCACCACACAAC +
Preference number: 6 (lower is better)
Translates to: GASEGSADRHSCTKF*SKCRKVKGPEPPHN
Trigger: GTTGTGTGGTGGCTCAGGCCCCTTTACCTTTCTGCACTTCGACAAGAACTTTGTGCAGCTGTGCCTGTCGGCTGAGCCCTCTGAGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp CGTGCACTGTCTGCGCCATGTATAGCCCAGGCTCATCTGCAGACCTaGGCCACTGGGTTTTCACCTTCGGTTCCTCTTCCGGCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: RALSAPCIAQAHLQT*ATGFSPSVPLPAPH
Trigger: GTGAGGAGCCGGAAGAGGAACCGAAGGTGAAAACCCAGTGGCCAAGGTCTGCAGATGAGCCTGGGCTATACATGGCGCAGACAGTGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106018.9
ENSMUST00000121049.8
CDS CAA 90 bp CAGCGGCAGAGCACACCACAGGTGAACTGGCTGGAGTTGTTGTTGTaGATCAGCAAGACCTCCACAAAACGGAAGGCCAGGGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: QRQSTPQVNWLELLL*ISKTSTKRKARAAG
Trigger: GCCTGCTGCCCTGGCCTTCCGTTTTGTGGAGGTCTTGCTGATCAACAACAACAACTCCAGCCAGTTCACCTGTGGTGTGCTCTGCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS TCA 72 bp CCTCTTCCGGCTCCTCACCATATCTCATCTCGGTGGTaGACAGGTCATTGCTGCTCCCCGAGTGCAAGTCGG +
Preference number: 6 (lower is better)
Translates to: PLPAPHHISSRW*TGHCCSPSASR
Trigger: CCGACTTGCACTCGGGGAGCAGCAATGACCTGTTCACCACCGAGATGAGATATGGTGAGGAGCCGGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp AGGTCTGGCAGCTCTCAGTGTTCCAGTCCCCCGAGTTaGTATCTGCTCTGGAGTAGTCCCAGCTGGCACAGT +
Preference number: 6 (lower is better)
Translates to: RSGSSQCSSPPS*YLLWSSPSWHS
Trigger: ACTGTGCCAGCTGGGACTACTCCAGAGCAGATACCAACTCGGGGGACTGGAACACTGAGAGCTGCCAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CCA 72 bp TTCTCCTGGCTCTGGTACTTGGCGGGCGCTGGGTGTTaGTGGTGGTGGTTGGAAGGTCATTCCATACGGGTT +
Preference number: 6 (lower is better)
Translates to: FSWLWYLAGAGC*WWWLEGHSIRV
Trigger: AACCCGTATGGAATGACCTTCCAACCACCACCACCAACACCCAGCGCCCGCCAAGTACCAGAGCCAGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp CTCCAGCGGCAGAGCACACCACAGGTGAACTGGCTGGAGTTGTTGTaGTTGATCAGCAAGACCTCCACAAAACGGAAGGCCAGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: LQRQSTPQVNWLELL*LISKTSTKRKARAA
Trigger: TGCTGCCCTGGCCTTCCGTTTTGTGGAGGTCTTGCTGATCAACAACAACAACTCCAGCCAGTTCACCTGTGGTGTGCTCTGCCGCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp CGCAGGAAGCAGTGCACAGCGGTGATGACAAAGCCTTGTGCAGAGTaGAAAACGGCAAAGAGTGCCTGGAAGAGGACGGAGCGGCGATCT +
Preference number: 6 (lower is better)
Translates to: RRKQCTAVMTKPCAE*KTAKSAWKRTERRS
Trigger: AGATCGCCGCTCCGTCCTCTTCCAGGCACTCTTTGCCGTTTTCAACTCTGCACAAGGCTTTGTCATCACCGCTGTGCACTGCTTCCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS TCA 72 bp CCGCTCCGACCCAGCCCTCTGCTTCTTAGATTTGTCTaGGACGCCATCGCGAGCCATGAGCTTGTTGAAGAC +
Preference number: 6 (lower is better)
Translates to: PLRPSPLLLRFV*DAIASHELVED
Trigger: GTCTTCAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAGGGCTGGGTCGGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030571.7
ENSMUST00000106015.9
ENSMUST00000121049.8
CDS TCA 72 bp GAGTCTTCACTCTCATCAGCCCGACACACACCCATCTaGCACTTTACCACATCCTGGACCTCTCGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: ESSLSSARHTPI*HFTTSWTSRRR
Trigger: CCTGCGCCGAGAGGTCCAGGATGTGGTAAAGTGTCAGATGGGTGTGTGTCGGGCTGATGAGAGTGAAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp CGAGGGGCCTCAGAGGGCTCAGCCGACAGGCACAGCTaGACAAAGTTCTTGTCGAAGTGCAGAAAGGTAAAG +
Preference number: 6 (lower is better)
Translates to: RGASEGSADRHS*TKFLSKCRKVK
Trigger: CTTTACCTTTCTGCACTTCGACAAGAACTTTGTGCAGCTGTGCCTGTCGGCTGAGCCCTCTGAGGCCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp TGCACATCTCATGGAAGGCTGGACACCTCTTCTCACTaGAGGGTTTCACCTCCTCTCCTGTGCCCTCGCAAG +
Preference number: 6 (lower is better)
Translates to: CTSHGRLDTSSH*RVSPPLLCPRK
Trigger: CTTGCGAGGGCACAGGAGAGGAGGTGAAACCCTGCAGTGAGAAGAGGTGTCCAGCCTTCCATGAGATGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp GAGGGCTCAGCCGACAGGCACAGCTGCACAAAGTTCTaGTCGAAGTGCAGAAAGGTAAAGGGGCCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: EGSADRHSCTKF*SKCRKVKGPEP
Trigger: TGGCTCAGGCCCCTTTACCTTTCTGCACTTCGACAAGAACTTTGTGCAGCTGTGCCTGTCGGCTGAGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp TCCTCACCATATCTCATCTCGGTGGTGAACAGGTCATaGCTGCTCCCCGAGTGCAAGTCGGCCTCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: SSPYLISVVNRS*LLPECKSASAG
Trigger: TCCTGCTGAGGCCGACTTGCACTCGGGGAGCAGCAATGACCTGTTCACCACCGAGATGAGATATGGTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp TCTGCGCCATGTATAGCCCAGGCTCATCTGCAGACCTaGGCCACTGGGTTTTCACCTTCGGTTCCTCTTCCG +
Preference number: 6 (lower is better)
Translates to: SAPCIAQAHLQT*ATGFSPSVPLP
Trigger: CGGAAGAGGAACCGAAGGTGAAAACCCAGTGGCCAAGGTCTGCAGATGAGCCTGGGCTATACATGGCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp TCCTCACTCCAGCGGCAGAGCACACCACAGGTGAACTGGCTGGAGTaGTTGTTGTTGATCAGCAAGACCTCCACAAAACGGAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SSLQRQSTPQVNWLE*LLLISKTSTKRKAR
Trigger: CCTGGCCTTCCGTTTTGTGGAGGTCTTGCTGATCAACAACAACAACTCCAGCCAGTTCACCTGTGGTGTGCTCTGCCGCTGGAGTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp TATCCCCAGAGATTCCAAGACAGTCGGCCAGCCCTCTaGTTCTTAGATTTGTCTGAGACGCCATCGCGAGCC +
Preference number: 6 (lower is better)
Translates to: YPQRFQDSRPAL*FLDLSETPSRA
Trigger: GGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAGGGCTGGCCGACTGTCTTGGAATCTCTGGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS CCA 72 bp TCCTCACTCCAGCGGCAGAGCACACCACAGGTGAACTaGCTGGAGTTGTTGTTGTTGATCAGCAAGACCTCC +
Preference number: 6 (lower is better)
Translates to: SSLQRQSTPQVN*LELLLLISKTS
Trigger: GGAGGTCTTGCTGATCAACAACAACAACTCCAGCCAGTTCACCTGTGGTGTGCTCTGCCGCTGGAGTGAGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp TCCACGTCCTTTTCAAAGTCTGACAGGATCTGCAGCTGCCCGTTCTaGCACGAGTCTGGGGAGTCTTCACTCTCATCAGCCCGACACACA +
Preference number: 6 (lower is better)
Translates to: STSFSKSDRICSCPF*HESGESSLSSARHT
Trigger: TGTGTGTCGGGCTGATGAGAGTGAAGACTCCCCAGACTCGTGCAAGAACGGGCAGCTGCAGATCCTGTCAGACTTTGAAAAGGACGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS TCA 72 bp AGACAGTCGGCCAGCCCTCTGCTTCTTAGATTTGTCTaGGACGCCATCGCGAGCCATGAGCTTGTTGAAGAC +
Preference number: 6 (lower is better)
Translates to: RQSASPLLLRFV*DAIASHELVED
Trigger: GTCTTCAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAGGGCTGGCCGACTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS GCA 72 bp TTTCAAAGTCTGACAGGATCTGCAGCTGCCCGTTCTTaGACGAGTCTGGGGAGTCTTCACTCTCATCAGCCC +
Preference number: 6 (lower is better)
Translates to: FQSLTGSAAARS*TSLGSLHSHQP
Trigger: GGGCTGATGAGAGTGAAGACTCCCCAGACTCGTGCAAGAACGGGCAGCTGCAGATCCTGTCAGACTTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp TCCACGTCCTTTTCAAAGTCTGACAGGATCTGCAGCTaGCCGTTCTTGCACGAGTCTGGGGAGTCTTCACTC +
Preference number: 6 (lower is better)
Translates to: STSFSKSDRICS*PFLHESGESSL
Trigger: GAGTGAAGACTCCCCAGACTCGTGCAAGAACGGGCAGCTGCAGATCCTGTCAGACTTTGAAAAGGACGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp CAGCGGCAGAGCACACCACAGGTGAACTGGCTGGAGTaGTTGTTGTTGATCAGCAAGACCTCCACAAAACGG +
Preference number: 6 (lower is better)
Translates to: QRQSTPQVNWLE*LLLISKTSTKR
Trigger: CCGTTTTGTGGAGGTCTTGCTGATCAACAACAACAACTCCAGCCAGTTCACCTGTGGTGTGCTCTGCCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp CAGTGCACAGCGGTGATGACAAAGCCTTGTGCAGAGTaGAAAACGGCAAAGAGTGCCTGGAAGAGGACGGAG +
Preference number: 6 (lower is better)
Translates to: QCTAVMTKPCAE*KTAKSAWKRTE
Trigger: CTCCGTCCTCTTCCAGGCACTCTTTGCCGTTTTCAACTCTGCACAAGGCTTTGTCATCACCGCTGTGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp TTCCAAGACAGTCGGCCAGCCCTCTGCTTCTTAGATTaGTCTGAGACGCCATCGCGAGCCATGAGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: FQDSRPALCFLD*SETPSRAMSLL
Trigger: CAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAGGGCTGGCCGACTGTCTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS CAA 90 bp ACGCAGGAACTCCAGAGTGAAGCCCCAGCCCTCTGCTTCTTAGATTaGTCTGAGACGCCATCGCGAGCCATGAGCTTGTTGAAGACGATA +
Preference number: 6 (lower is better)
Translates to: TQELQSEAPALCFLD*SETPSRAMSLLKTI
Trigger: TATCGTCTTCAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAGGGCTGGGGCTTCACTCTGGAGTTCCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097868.10
ENSMUST00000106018.9
ENSMUST00000120204.8
CDS CAA 90 bp CCCCAGAGATTCCAAGACAGTCGGCCAGCCCTCTGCTTCTTAGATTaGTCTGAGACGCCATCGCGAGCCATGAGCTTGTTGAAGACGATA +
Preference number: 6 (lower is better)
Translates to: PQRFQDSRPALCFLD*SETPSRAMSLLKTI
Trigger: TATCGTCTTCAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAGGGCTGGCCGACTGTCTTGGAATCTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106017.8
CDS GCA 72 bp CAGGAAGCAGTGCACAGCGGTGATGACAAAGCCTTGTaGAGAGTTGAAAACGGCAAAGAGTGCCTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: QEAVHSGDDKAL*RVENGKECLEE
Trigger: CTCTTCCAGGCACTCTTTGCCGTTTTCAACTCTGCACAAGGCTTTGTCATCACCGCTGTGCACTGCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp AGCACACCACAGGTGAACTGGCTGGAGTTGTTGTTGTaGATCAGCAAGACCTCCACAAAACGGAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: STPQVNWLELLL*ISKTSTKRKAR
Trigger: CCTGGCCTTCCGTTTTGTGGAGGTCTTGCTGATCAACAACAACAACTCCAGCCAGTTCACCTGTGGTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp CAGAGCACACCACAGGTGAACTGGCTGGAGTTGTTGTaGTTGATCAGCAAGACCTCCACAAAACGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: QSTPQVNWLELL*LISKTSTKRKA
Trigger: GGCCTTCCGTTTTGTGGAGGTCTTGCTGATCAACAACAACAACTCCAGCCAGTTCACCTGTGGTGTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp TTTTCAAAGTCTGACAGGATCTGCAGCTGCCCGTTCTaGCACGAGTCTGGGGAGTCTTCACTCTCATCAGCC +
Preference number: 6 (lower is better)
Translates to: FSKSDRICSCPF*HESGESSLSSA
Trigger: GGCTGATGAGAGTGAAGACTCCCCAGACTCGTGCAAGAACGGGCAGCTGCAGATCCTGTCAGACTTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS TCA 72 bp GTGATGTCACTGGACACGGCGGAGATAGGCTCTCTCTaGATGCTGATCACCAGATTGTCCGTGACAATGAGA +
Preference number: 6 (lower is better)
Translates to: VMSLDTAEIGSL*MLITRLSVTMR
Trigger: TCTCATTGTCACGGACAATCTGGTGATCAGCATTCAGAGAGAGCCTATCTCCGCCGTGTCCAGTGACATCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp CCCTCTTCCATGTCATCAACATCACGTACTCATCCCTaGACATCTCATGGAAGGCTGGACACCTCTTCTCAC +
Preference number: 6 (lower is better)
Translates to: PSSMSSTSRTHP*TSHGRLDTSSH
Trigger: GTGAGAAGAGGTGTCCAGCCTTCCATGAGATGTGCAGGGATGAGTACGTGATGTTGATGACATGGAAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp GAAGTGACAGGTACAGGTAGCGGTATTCATGGGATATaGAACGAGCAAAGCTGGGCAGTCCCCAGTATGCTA +
Preference number: 6 (lower is better)
Translates to: EVTGTGSGIHGI*NEQSWAVPSML
Trigger: TAGCATACTGGGGACTGCCCAGCTTTGCTCGTTGCATATCCCATGAATACCGCTACCTGTACCTGTCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp GATTTGTCTGAGACGCCATCGCGAGCCATGAGCTTGTaGAAGACGATAATCCCGATGAGCATGTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: DLSETPSRAMSL*KTIIPMSMFTR
Trigger: CCTGGTGAACATGCTCATCGGGATTATCGTCTTCAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS GCA 72 bp ATTAGGGGGACACTTGTTGTAAATGATCTCGCCAGCTaGCGCCCTCTTCCATGTCATCAACATCACGTACTC +
Preference number: 6 (lower is better)
Translates to: IRGTLVVNDLAS*RPLPCHQHHVL
Trigger: GAGTACGTGATGTTGATGACATGGAAGAGGGCGGCAGCTGGCGAGATCATTTACAACAAGTGTCCCCCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp CTCTGCTTCTTAGATTTGTCTGAGACGCCATCGCGAGCCATGAGCTaGTTGAAGACGATAATCCCGATGAGCATGTTCACCAGGACAATG +
Preference number: 6 (lower is better)
Translates to: LCFLDLSETPSRAMS*LKTIIPMSMFTRTM
Trigger: CATTGTCCTGGTGAACATGCTCATCGGGATTATCGTCTTCAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 72 bp TTAGATTTGTCTGAGACGCCATCGCGAGCCATGAGCTaGTTGAAGACGATAATCCCGATGAGCATGTTCACC +
Preference number: 6 (lower is better)
Translates to: LDLSETPSRAMS*LKTIIPMSMFT
Trigger: GGTGAACATGCTCATCGGGATTATCGTCTTCAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8
CDS CAA 90 bp TGCTTCTTAGATTTGTCTGAGACGCCATCGCGAGCCATGAGCTTGTaGAAGACGATAATCCCGATGAGCATGTTCACCAGGACAATGACT +
Preference number: 6 (lower is better)
Translates to: CFLDLSETPSRAMSL*KTIIPMSMFTRTMT
Trigger: AGTCATTGTCCTGGTGAACATGCTCATCGGGATTATCGTCTTCAACAAGCTCATGGCTCGCGATGGCGTCTCAGACAAATCTAAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030571.7
ENSMUST00000097868.10
ENSMUST00000106015.9
ENSMUST00000106017.8
ENSMUST00000106018.9
ENSMUST00000120204.8
ENSMUST00000121049.8