RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRA2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031486

Ensembl transcript IDs: ENSMUST00000033876.14, ENSMUST00000178514.8, ENSMUST00000179207.3, ENSMUST00000179351.2

Found 453 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGGCGCCCATGATGCAGGTTGTTATGGTGCCGGGGAGCTAGGCTaGCACGGGAGCCGGTGGGCTCTGGCTCTCCATCTCCGCGGGCGG +
Preference number: 1 (lower is better)
Translates to: LGAHDAGCYGAGELG*HGSRWALALHLRGR
Trigger: CCGCCCGCGGAGATGGAGAGCCAGAGCCCACCGGCTCCCGTGGCAGCCTAGCTCCCCGGCACCATAACAACCTGCATCATGGGCGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR TCA 90 bp CCGGCTCGGTGCCCCTTGGCCCGACTCTTGTGTACTCGGCGCCCATaGTGCAGGTTGTTATGGTGCCGGGGAGCTAGGCTGCCACGGGAG +
Preference number: 1 (lower is better)
Translates to: PARCPLARLLCTRRP*CRLLWCRGARLPRE
Trigger: CTCCCGTGGCAGCCTAGCTCCCCGGCACCATAACAACCTGCATCATGGGCGCCGAGTACACAAGAGTCGGGCCAAGGGGCACCGAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR CCA 90 bp GCCACTTGGGGAGGACTTGAGAGAGGCTGGTCCCTCCCCCAACACTaGGGATCCATCCTCTGTAGCAGTCGGCAGGGCCCGGGCTGGGAC +
Preference number: 1 (lower is better)
Translates to: ATWGGLERGWSLPQH*GSILCSSRQGPGWD
Trigger: GTCCCAGCCCGGGCCCTGCCGACTGCTACAGAGGATGGATCCCCAGTGTTGGGGGAGGGACCAGCCTCTCTCAAGTCCTCCCCAAGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR TCA 90 bp GCCACGCCGTACAGACAGCTACACACCACTCGGGGCAGCCAGCGCTaGGACACCGCCAAGGCACCACAAGCCCACATAGCCAGGTACAGG +
Preference number: 1 (lower is better)
Translates to: ATPYRQLHTTRGSQR*DTAKAPQAHIARYR
Trigger: CCTGTACCTGGCTATGTGGGCTTGTGGTGCCTTGGCGGTGTCTCAGCGCTGGCTGCCCCGAGTGGTGTGTAGCTGTCTGTACGGCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR GCA 90 bp GACGGGATGCAACCCAGCCCCAGAGCCTCCTGCCTCCCGCGGGAATaGATTCAGCTCCATAAGCACGGCCACATTGCCCAAGTGCTGGCA +
Preference number: 1 (lower is better)
Translates to: DGMQPSPRASCLPRE*IQLHKHGHIAQVLA
Trigger: TGCCAGCACTTGGGCAATGTGGCCGTGCTTATGGAGCTGAATGCATTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTGCATCCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
3UTR GCA 90 bp AAGAGACAGAGTAGCAGCAAAGCCGTGCAGGGGTACACGACGGGATaGAACCCAGCCCCAGAGCCTCCTGCCTCCCGCGGGAATGCATTC +
Preference number: 1 (lower is better)
Translates to: KRQSSSKAVQGYTTG*NPAPEPPASRGNAF
Trigger: GAATGCATTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTGCATCCCGTCGTGTACCCCTGCACGGCTTTGCTGCTACTCTGTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
3UTR TCA 90 bp CAGGCGCGCCAGGAAGCCCGGACATCTCTACGTCTGGCACAGTGGTaGGTGAAGACAAACAGACCAAGAGCTGAAGCTGCCACGCCGTAC +
Preference number: 1 (lower is better)
Translates to: QARQEARTSLRLAQW*VKTNRPRAEAATPY
Trigger: GTACGGCGTGGCAGCTTCAGCTCTTGGTCTGTTTGTCTTCACTCACCACTGTGCCAGACGTAGAGATGTCCGGGCTTCCTGGCGCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR TCA 90 bp CGCGCCAGGAAGCCCGGACATCTCTACGTCTGGCACAGTGGTGAGTaGAGACAAACAGACCAAGAGCTGAAGCTGCCACGCCGTACAGAC +
Preference number: 1 (lower is better)
Translates to: RARKPGHLYVWHSGE*RQTDQELKLPRRTD
Trigger: GTCTGTACGGCGTGGCAGCTTCAGCTCTTGGTCTGTTTGTCTTCACTCACCACTGTGCCAGACGTAGAGATGTCCGGGCTTCCTGGCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR GCA 90 bp GACACCGCCAAGGCACCACAAGCCCACATAGCCAGGTACAGGAAATaGGTGGTCATCAGCGCCCCCAGCTGGACTCCAGGAGAATATACG +
Preference number: 1 (lower is better)
Translates to: DTAKAPQAHIARYRK*VVISAPSWTPGEYT
Trigger: CGTATATTCTCCTGGAGTCCAGCTGGGGGCGCTGATGACCACGCATTTCCTGTACCTGGCTATGTGGGCTTGTGGTGCCTTGGCGGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR CCA 90 bp TCACCTGCTGGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTaGGATCTTGGCAGTCACAGGATACCTTGCCGGGCTGGTGTGGAG +
Preference number: 1 (lower is better)
Translates to: SPAGMVSQAKTGREA*DLGSHRIPCRAGVE
Trigger: CTCCACACCAGCCCGGCAAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 90 bp TCTGAAAGGCAGCACCTGTTACGCCCCCTGGCTCACCTGCTGGGATaGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCA +
Preference number: 1 (lower is better)
Translates to: SERQHLLRPLAHLLG*FPKPKLGERPGILA
Trigger: TGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCCAGGGGGCGTAACAGGTGCTGCCTTTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR TCA 90 bp CCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTaGTCAGAGCTGGGATCCCTGCTACTTCCCAGTGCCCAAGGGTTC +
Preference number: 1 (lower is better)
Translates to: PISASMASSLLCPLT*SELGSLLLPSAQGF
Trigger: GAACCCTTGGGCACTGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 90 bp TCCACAGTAGGGGCAAGCATCTGCCTCCCTCCCCTTTCCCTAGCCTaGGTAACTAATGATGGTGGACTCAAGGGCAGCATCAGCATGGCC +
Preference number: 1 (lower is better)
Translates to: STVGASICLPPLSLA*VTNDGGLKGSISMA
Trigger: GGCCATGCTGATGCTGCCCTTGAGTCCACCATCATTAGTTACCCAGGCTAGGGAAAGGGGAGGGAGGCAGATGCTTGCCCCTACTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 90 bp TGGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTaGCAGTCACAGGATACCTTGCCGGGCTGGTGTGGAGAACCCAGT +
Preference number: 1 (lower is better)
Translates to: WDGFPSQNWERGLGS*QSQDTLPGWCGEPS
Trigger: ACTGGGTTCTCCACACCAGCCCGGCAAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR TCA 90 bp AGGCATCTTGAGTTGAGGAAAATGGGGGCTGGAAGCATAGGCTCTTaGGCAGCCTGGACCCAGGCGCTGCCTCAGAGTGTGGTTGGGTTT +
Preference number: 1 (lower is better)
Translates to: RHLELRKMGAGSIGS*AAWTQALPQSVVGF
Trigger: AAACCCAACCACACTCTGAGGCAGCGCCTGGGTCCAGGCTGCTCAAGAGCCTATGCTTCCAGCCCCCATTTTCCTCAACTCAAGATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR TCA 90 bp TCTACGTCTGGCACAGTGGTGAGTGAAGACAAACAGACCAAGAGCTaGAGCTGCCACGCCGTACAGACAGCTACACACCACTCGGGGCAG +
Preference number: 1 (lower is better)
Translates to: STSGTVVSEDKQTKS*SCHAVQTATHHSGQ
Trigger: CTGCCCCGAGTGGTGTGTAGCTGTCTGTACGGCGTGGCAGCTTCAGCTCTTGGTCTGTTTGTCTTCACTCACCACTGTGCCAGACGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR CCA 90 bp GTTAATCTGAAAGGCAGCACCTGTTACGCCCCCTGGCTCACCTGCTaGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCT +
Preference number: 1 (lower is better)
Translates to: VNLKGSTCYAPWLTC*DGFPSQNWERGLGS
Trigger: AGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCCAGGGGGCGTAACAGGTGCTGCCTTTCAGATTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR GCA 90 bp ATAGTTAATCTGAAAGGCAGCACCTGTTACGCCCCCTGGCTCACCTaGTGGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: IVNLKGSTCYAPWLT*WDGFPSQNWERGLG
Trigger: TCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCCAGGGGGCGTAACAGGTGCTGCCTTTCAGATTAACTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR GCA 90 bp ATAGTTAGGGATTCTGTCTCCCTAATGCACCTTTTCCCACCTGCCTaGCTCCTGAGGGACAAGCTCATCTCTAGAGCTGCCCACCACACT +
Preference number: 1 (lower is better)
Translates to: IVRDSVSLMHLFPPA*LLRDKLISRAAHHT
Trigger: AGTGTGGTGGGCAGCTCTAGAGATGAGCTTGTCCCTCAGGAGGCAGGCAGGTGGGAAAAGGTGCATTAGGGAGACAGAATCCCTAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR TCA 90 bp GACCACTGTATAGGTTGTGAGATCCACATATCAGCTCCCTCCCCTTaGGTCTTAAGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTG +
Preference number: 1 (lower is better)
Translates to: DHCIGCEIHISAPSP*VLRHLLAVSLPRCV
Trigger: CACACACCTGGGAAGTGATACTGCCAGCAGGTGCCTTAAGACTCAAGGGGAGGGAGCTGATATGTGGATCTCACAACCTATACAGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 90 bp GGACCGATGGATGTTTTATGCCTACCTGGCAGGATACCAAGAACTTaGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACTGCTGAGG +
Preference number: 1 (lower is better)
Translates to: GPMDVLCLPGRIPRT*PPKLVWDCLSLLLR
Trigger: CCTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCCAGGTAGGCATAAAACATCCATCGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR TCA 90 bp CTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGTaGACTCTGCTGGAAAAACTGTGTACCACTCCCATAGTTAGGGAT +
Preference number: 1 (lower is better)
Translates to: LAVSLPRCVGVQGLL*TLLEKLCTTPIVRD
Trigger: ATCCCTAACTATGGGAGTGGTACACAGTTTTTCCAGCAGAGTTCACAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp CTCTCCATCTCCGCGGGCGGCCACGCTTGCCTCGCACACCTGACTCTGGGCCACGCCCGGGCTGGGACATaGGAGGCCGAGGGCGAAGCA +
Preference number: 2 (lower is better)
Translates to: LSISAGGHACLAHLTLGHARAGT*EAEGEA
Trigger: TGCTTCGCCCTCGGCCTCCCATGTCCCAGCCCGGGC...GTGGCCCAGAGTCAGGTGTGCGAGGCAAGCGTGGCCGCCCGCGGAGATGGAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR-3UTR CCA 90 bp GCTAGGCTGCCACGGGAGCCGGTGGGCTCTGGCTCTCCATCTCCGCGGGCGGCCTCCCTCCCCCAACACTaGGGATCCATCCTCTGTAGC +
Preference number: 2 (lower is better)
Translates to: ARLPREPVGSGSPSPRAASLPQH*GSILCS
Trigger: GCTACAGAGGATGGATCCCCAGTGTTGGGGGAGGGA...GGCCGCCCGCGGAGATGGAGAGCCAGAGCCCACCGGCTCCCGTGGCAGCCTAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR-3UTR CCA 90 bp GCCTTGAGCCGGCTCTTACCACCAGTCTCTCCGGCTCGGTGCCCCTTGGCCCGAGGACTTGAGAGAGGCTaGTCCCTCCCCCAACACTGG +
Preference number: 2 (lower is better)
Translates to: ALSRLLPPVSPARCPLARGLERG*SLPQHW
Trigger: CCAGTGTTGGGGGAGGGACCAGCCTCTCTCAAGTCC...TCGGGCCAAGGGGCACCGAGCCGGAGAGACTGGTGGTAAGAGCCGGCTCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR-3UTR TCA 90 bp AGGCCGAGGGCGAAGCAGGAGGGCAGCAGGCGCGCCAGGAAGCCCGGACATCTCTGGCACAGTGGTGAGTaGAGACAAACAGACCAAGAG +
Preference number: 2 (lower is better)
Translates to: RPRAKQEGSRRARKPGHLWHSGE*RQTDQE
Trigger: CTCTTGGTCTGTTTGTCTTCACTCACCACTGTGCCA...GAGATGTCCGGGCTTCCTGGCGCGCCTGCTGCCCTCCTGCTTCGCCCTCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR-3UTR CCA 90 bp CAGAGTAGCAGCAAAGCCGTGCAGGGGTACACGACGGGATGCAACCCAGCCCCACCTCCAGGCCCGTCCTaGTTCCACCAAGCTGCCATG +
Preference number: 2 (lower is better)
Translates to: QSSSKAVQGYTTGCNPAPPPGPS*FHQAAM
Trigger: CATGGCAGCTTGGTGGAACCAGGACGGGCCTGGAGG...TGGGGCTGGGTTGCATCCCGTCGTGTACCCCTGCACGGCTTTGCTGCTACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
3UTR CAA 90 bp CTGGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTaGGCAGTCACAGGATACCTTGCCGGGCTGGTGTGGAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: LGWFPKPKLGERPGI*AVTGYLAGLVWRTQ
Trigger: CTGGGTTCTCCACACCAGCCCGGCAAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR TCA 90 bp AGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGCACCTGCCTGCCTCCTaGGGGACAAGCTCATCTCTA +
Preference number: 2 (lower is better)
Translates to: RHLLAVSLPRCVGVQGLLHLPAS*GTSSSL
Trigger: TAGAGATGAGCTTGTCCCTCAGGAGGCAGGCAGGTG...CAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAGCAGGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR TCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCCACCTGCCTGCCTCCTaGGGGACAAGCTCATCTCTA +
Preference number: 2 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPHLPAS*GTSSSL
Trigger: TAGAGATGAGCTTGTCCCTCAGGAGGCAGGCAGGTG...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CAA 90 bp ACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTaGATCAGAGCTGGGATCCCTGCTACTTCCCAGTGCCCAAGGGTT +
Preference number: 2 (lower is better)
Translates to: THLSEYGVFPALSSH*IRAGIPATSQCPRV
Trigger: AACCCTTGGGCACTGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp AGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGTTCCCAAGCCAAAACTaGGAGAGAGGCCTGGGATCT +
Preference number: 2 (lower is better)
Translates to: RHLLAVSLPRCVGVQGLLFPSQN*ERGLGS
Trigger: AGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAA...CAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAGCAGGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp TCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGCCCTGGCTCACCTGCTaGGATGGTTTCCCAAGCCAA +
Preference number: 2 (lower is better)
Translates to: SQRVWRLPCSVLSLDQSWPWLTC*DGFPSQ
Trigger: TTGGCTTGGGAAACCATCCCAGCAGGTGAGCCAGGG...CCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp AGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGCACCCCCATCCCCCTTaGATAGTTAATCTGAAAGGC +
Preference number: 2 (lower is better)
Translates to: RHLLAVSLPRCVGVQGLLHPHPP*IVNLKG
Trigger: GCCTTTCAGATTAACTATGCAAGGGGGATGGGGGTG...CAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAGCAGGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTCTTTTCCCACCTGCCTaGCTCCTGAGGGACAAGCTC +
Preference number: 2 (lower is better)
Translates to: IMGPISASMASSLLCPLTLFPPA*LLRDKL
Trigger: GAGCTTGTCCCTCAGGAGGCAGGCAGGTGGGAAAAG...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTTCCCAAGCCAAAACTaGGAGAGAGGCCTGGGATCT +
Preference number: 2 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPFPSQN*ERGLGS
Trigger: AGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAA...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CAA 90 bp TGCCACAGGAGCCTCATGGAGGCATTTCCCCTCAGTCCCCCGGAGTaGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGCAGCTA +
Preference number: 2 (lower is better)
Translates to: CHRSLMEAFPLSPPE*EGWEQTVGIIIKQL
Trigger: TAGCTGCTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAGGGGAAATGCCTCCATGAGGCTCCTGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp GGCTCACCTGCTGGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATAGGATACCAAGAACTTaGCCACCAAAACTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: GSPAGMVSQAKTGREAWDRIPRT*PPKLVW
Trigger: CCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCT...ATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTCCACCAAAACTGGTCTaGGATTGTCTGTCGCTACTG +
Preference number: 2 (lower is better)
Translates to: PKPKLGERPGILAVTGYLPPKLV*DCLSLL
Trigger: CAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGG...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CAA 90 bp GGGACCGATGGATGTTTTATGCCTACCTGGCAGGATACCAAGAACTaGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACTGCTGAG +
Preference number: 2 (lower is better)
Translates to: GTDGCFMPTWQDTKN*ATKTGLGLSVATAE
Trigger: CTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCCAGGTAGGCATAAAACATCCATCGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR TCA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCAAAAGGCATCTTGAGTTaGGGAAAATGGGGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPKGILS*GKWGLE
Trigger: TTCCAGCCCCCATTTTCCTCAACTCAAGATGCCTTT...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGGGGGTTCAGGGTTTaGTGTGAACTCTGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: IMGPISASMASSLLCPLTWGFRV*CELCWK
Trigger: TTTCCAGCAGAGTTCACAGCAAACCCTGAACCCCCA...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGAGGATACCAAGAACTTaGCCACCAAAACTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQRIPRT*PPKLVW
Trigger: CCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCT...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR TCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTGTTCAGGGTTTGCTGTaGACTCTGCTGGAAAAACTG +
Preference number: 2 (lower is better)
Translates to: IMGPISASMASSLLCPLTVQGLL*TLLEKL
Trigger: CAGTTTTTCCAGCAGAGTTCACAGCAAACCCTGAAC...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTCCGATGGATGTTTTATaGCTACCTGGCAGGATACCA +
Preference number: 2 (lower is better)
Translates to: IMGPISASMASSLLCPLTPMDVL*LPGRIP
Trigger: TGGTATCCTGCCAGGTAGGCATAAAACATCCATCGG...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGCCCCCTGGCTCACCTaGTGGGATGGTTTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSAPWLT*WDGFPS
Trigger: GCTTGGGAAACCATCCCAGCAGGTGAGCCAGGGGGC...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTTATTAGCATGGCTTTaGCACAGGAGCCTCATGGAG +
Preference number: 2 (lower is better)
Translates to: IMGPISASMASSLLCPLTLLAWL*HRSLME
Trigger: CTCCATGAGGCTCCTGTGGCAAAGCCATGCTAATAA...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATCCTGGACCCAGGCGCTaGCTCAGAGTGTGGTTGGGT +
Preference number: 2 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYPGPRR*LRVWLG
Trigger: ACCCAACCACACTCTGAGGCAGCGCCTGGGTCCAGG...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATGCACCTTTTCCCACCTaGCTGCCTCCTGAGGGACAA +
Preference number: 2 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYAPFPT*LPPEGQ
Trigger: TTGTCCCTCAGGAGGCAGGCAGGTGGGAAAAGGTGC...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGCCTGCTACTTCCCAGTaGCCAAGGGTTCCTCTACTT +
Preference number: 2 (lower is better)
Translates to: PLIVSVQQSINNGTHLSEPATSQ*PRVPLL
Trigger: AAGTAGAGGAACCCTTGGGCACTGGGAAGTAGCAGG...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGTGCTGTGAACTCTGCTaGAAAAACTGTGTACCACTC +
Preference number: 2 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKCCELC*KNCVPL
Trigger: GAGTGGTACACAGTTTTTCCAGCAGAGTTCACAGCA...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGGCCACAGGAGCCTCATaGAGGCATTTCCCCTCAGTC +
Preference number: 2 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKATGAS*RHFPSV
Trigger: GACTGAGGGGAAATGCCTCCATGAGGCTCCTGTGGC...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR TCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCCTCTGTCCTCTCACTTaGTCAGAGCTGGGATCCCTG +
Preference number: 2 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSLCPLT*SELGSL
Trigger: CAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAG...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGCCACCAAAACTGGTCTaGGATTGTCTGTCGCTACTG +
Preference number: 2 (lower is better)
Translates to: PLIVSVQQSINNGTHLSEPPKLV*DCLSLL
Trigger: CAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGG...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGTTTCCTGAGCCTACCTaGGCTGGGCTCTTCAACTCA +
Preference number: 2 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKFPEPT*AGLFNS
Trigger: TGAGTTGAAGAGCCCAGCCCAGGTAGGCTCAGGAAA...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGGAGGAAAATGGGGGCTaGAAGCATAGGCTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKEENGG*KHRLLS
Trigger: GCTCAAGAGCCTATGCTTCCAGCCCCCATTTTCCTC...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCCACCCCCATCCCCCTTaGATAGTTAATCTGAAAGGC +
Preference number: 2 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSHPHPP*IVNLKG
Trigger: GCCTTTCAGATTAACTATGCAAGGGGGATGGGGGTG...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CCA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATTCACTTGATCAGAGCTaGGATCCCTGCTACTTCCCA +
Preference number: 2 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYSLDQS*DPCYFP
Trigger: TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGA...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR GCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGGTTTGCTGTGAACTCTaGTGGAAAAACTGTGTACCA +
Preference number: 2 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKVCCEL*WKNCVP
Trigger: TGGTACACAGTTTTTCCAGCAGAGTTCACAGCAAAC...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR GCA 72 bp GGGCTCTGGCTCTCCATCTCCGCGGGCGGCCACGCTTaGCTCGCACACCTGACTCTGGGCCACCTGCAGATT +
Preference number: 3 (lower is better)
Translates to: GLWLSISAGGHA*LAHLTLGHLQI
Trigger: AATCTGCAGGTGGCCCAGAGTCAGGTGTGCGAGGCAAGCGTGGCCGCCCGCGGAGATGGAGAGCCAGAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR GCA 72 bp AGTAGCAGCAAAGCCGTGCAGGGGTACACGACGGGATaGAACCCAGCCCCAGAGCCTCCTGCCTCCCGCGGG +
Preference number: 3 (lower is better)
Translates to: SSSKAVQGYTTG*NPAPEPPASRG
Trigger: CCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTGCATCCCGTCGTGTACCCCTGCACGGCTTTGCTGCTACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
3UTR TCA 72 bp CCATCTCCGCGGGCGGCCACGCTTGCCTCGCACACCTaGCTCTGGGCCACCTGCAGATTGGTGAGTTTGCAG +
Preference number: 3 (lower is better)
Translates to: PSPRAATLASHT*LWATCRLVSLQ
Trigger: CTGCAAACTCACCAATCTGCAGGTGGCCCAGAGTCAGGTGTGCGAGGCAAGCGTGGCCGCCCGCGGAGATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR GCA 72 bp TTGAGCCGGCTCTTACCACCAGTCTCTCCGGCTCGGTaGCCCTTGGCCCGACTCTTGTGTACTCGGCGCCCA +
Preference number: 3 (lower is better)
Translates to: LSRLLPPVSPAR*PLARLLCTRRP
Trigger: TGGGCGCCGAGTACACAAGAGTCGGGCCAAGGGGCACCGAGCCGGAGAGACTGGTGGTAAGAGCCGGCTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR CCA 72 bp GGAGGACTTGAGAGAGGCTGGTCCCTCCCCCAACACTaGGGATCCATCCTCTGTAGCAGTCGGCAGGGCCCG +
Preference number: 3 (lower is better)
Translates to: GGLERGWSLPQH*GSILCSSRQGP
Trigger: CGGGCCCTGCCGACTGCTACAGAGGATGGATCCCCAGTGTTGGGGGAGGGACCAGCCTCTCTCAAGTCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR TCA 72 bp CGGCCACATTGCCCAAGTGCTGGCAGTACAGGGAGCTaGCGTTGGGCTGGCTGTAGCGGAGCCTGCAGCCTT +
Preference number: 3 (lower is better)
Translates to: RPHCPSAGSTGS*RWAGCSGACSL
Trigger: AAGGCTGCAGGCTCCGCTACAGCCAGCCCAACGTCAGCTCCCTGTACTGCCAGCACTTGGGCAATGTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
3UTR TCA 72 bp TACAGACAGCTACACACCACTCGGGGCAGCCAGCGCTaGGACACCGCCAAGGCACCACAAGCCCACATAGCC +
Preference number: 3 (lower is better)
Translates to: YRQLHTTRGSQR*DTAKAPQAHIA
Trigger: GGCTATGTGGGCTTGTGGTGCCTTGGCGGTGTCTCAGCGCTGGCTGCCCCGAGTGGTGTGTAGCTGTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR TCA 72 bp TGCCCCTTGGCCCGACTCTTGTGTACTCGGCGCCCATaGTGCAGGTTGTTATGGTGCCGGGGAGCTAGGCTG +
Preference number: 3 (lower is better)
Translates to: CPLARLLCTRRP*CRLLWCRGARL
Trigger: CAGCCTAGCTCCCCGGCACCATAACAACCTGCATCATGGGCGCCGAGTACACAAGAGTCGGGCCAAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR GCA 72 bp CAACCCAGCCCCAGAGCCTCCTGCCTCCCGCGGGAATaGATTCAGCTCCATAAGCACGGCCACATTGCCCAA +
Preference number: 3 (lower is better)
Translates to: QPSPRASCLPRE*IQLHKHGHIAQ
Trigger: TTGGGCAATGTGGCCGTGCTTATGGAGCTGAATGCATTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
3UTR GCA 72 bp GTACACGACGGGATGCAACCCAGCCCCAGAGCCTCCTaGCTCCCGCGGGAATGCATTCAGCTCCATAAGCAC +
Preference number: 3 (lower is better)
Translates to: VHDGMQPSPRAS*LPRECIQLHKH
Trigger: GTGCTTATGGAGCTGAATGCATTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTGCATCCCGTCGTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
3UTR CCA 72 bp CAGCACCTGTTACGCCCCCTGGCTCACCTGCTGGGATaGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: QHLLRPLAHLLG*FPKPKLGERPG
Trigger: CCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCCAGGGGGCGTAACAGGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 72 bp CTGGGATCTTGGCAGTCACAGGATACCTTGCCGGGCTaGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCA +
Preference number: 3 (lower is better)
Translates to: LGSWQSQDTLPG*CGEPSSPVSLS
Trigger: TGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGTATCCTGTGACTGCCAAGATCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 72 bp AAAGGCAGCACCTGTTACGCCCCCTGGCTCACCTGCTaGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGC +
Preference number: 3 (lower is better)
Translates to: KGSTCYAPWLTC*DGFPSQNWERG
Trigger: GCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCCAGGGGGCGTAACAGGTGCTGCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 72 bp CTTGAGCAGCCTGGACCCAGGCGCTGCCTCAGAGTGTaGTTGGGTTTCAGCGAGTTAGGAGGTGGTTTGGCA +
Preference number: 3 (lower is better)
Translates to: LEQPGPRRCLRV*LGFSELGGGLA
Trigger: TGCCAAACCACCTCCTAACTCGCTGAAACCCAACCACACTCTGAGGCAGCGCCTGGGTCCAGGCTGCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CAA 90 bp AGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGGAGAGGCCTGGGATCTaGGCAGTCACAGGATACCTT +
Preference number: 3 (lower is better)
Translates to: RHLLAVSLPRCVGVQGLLERPGI*AVTGYL
Trigger: AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTC...CAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAGCAGGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR TCA 72 bp GCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTaGTCAGAGCTGGGATCCCTGCTACTTCCCAGTGCC +
Preference number: 3 (lower is better)
Translates to: ASMASSLLCPLT*SELGSLLLPSA
Trigger: GGCACTGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR GCA 72 bp CTGAAAGGCAGCACCTGTTACGCCCCCTGGCTCACCTaGTGGGATGGTTTCCCAAGCCAAAACTGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: LKGSTCYAPWLT*WDGFPSQNWER
Trigger: TCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCCAGGGGGCGTAACAGGTGCTGCCTTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 72 bp ATCTTGGCAGTCACAGGATACCTTGCCGGGCTGGTGTaGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCC +
Preference number: 3 (lower is better)
Translates to: ILAVTGYLAGLV*RTQFPGLPLIS
Trigger: GGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGTATCCTGTGACTGCCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 72 bp TTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTaGCAGTCACAGGATACCTTGCCGGGCTGGTGTGGA +
Preference number: 3 (lower is better)
Translates to: FPSQNWERGLGS*QSQDTLPGWCG
Trigger: TCCACACCAGCCCGGCAAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 72 bp CGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTaGGATCCCTGCTACTTCCCAGTGCCCAAGGGTTCC +
Preference number: 3 (lower is better)
Translates to: RLPCSVLSLDQS*DPCYFPVPKGS
Trigger: GGAACCCTTGGGCACTGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 72 bp TGGCTCACCTGCTGGGATGGTTTCCCAAGCCAAAACTaGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGAT +
Preference number: 3 (lower is better)
Translates to: WLTCWDGFPSQN*ERGLGSWQSQD
Trigger: ATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CAA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTCAGGATACCAAGAACTaGGCCACCAAAACTGGTCTG +
Preference number: 3 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWAQDTKN*ATKTGL
Trigger: CAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTG...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR TCA 72 bp TGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTaGGCCTACCTGGGCTGGGCTCTTCAACTCAGTTTA +
Preference number: 3 (lower is better)
Translates to: WRTQFPGLPLIS*AYLGWALQLSL
Trigger: TAAACTGAGTTGAAGAGCCCAGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR TCA 72 bp GGCACAGTGGTGAGTGAAGACAAACAGACCAAGAGCTaGAGCTGCCACGCCGTACAGACAGCTACACACCAC +
Preference number: 3 (lower is better)
Translates to: GTVVSEDKQTKS*SCHAVQTATHH
Trigger: GTGGTGTGTAGCTGTCTGTACGGCGTGGCAGCTTCAGCTCTTGGTCTGTTTGTCTTCACTCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
3UTR CCA 72 bp AGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTaGGCTGGGCTCTTCAACTCAGTTTATGGGTTACCC +
Preference number: 3 (lower is better)
Translates to: SSPVSLSFPEPT*AGLFNSVYGLP
Trigger: GGGTAACCCATAAACTGAGTTGAAGAGCCCAGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CAA 90 bp TGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGACAGGATACCAAGAACTaGGCCACCAAAACTGGTCTG +
Preference number: 3 (lower is better)
Translates to: WFPKPKLGERPGILAVTGQDTKN*ATKTGL
Trigger: CAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTG...TCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CAA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGATCAGCTCCCTCCCCTaGAGTCTTAAGGCACCTGCT +
Preference number: 3 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKISSLP*SLKAPA
Trigger: AGCAGGTGCCTTAAGACTCAAGGGGAGGGAGCTGAT...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 72 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTaGGATTGTCTGTCGCTACTGCTGAGGGATAGTCCA +
Preference number: 3 (lower is better)
Translates to: GRIPRTWPPKLV*DCLSLLLRDSP
Trigger: TGGACTATCCCTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 72 bp ATAGTTAATCTGAAAGGCAGCACCTGTTACGCCCCCTaGCTCACCTGCTGGGATGGTTTCCCAAGCCAAAAC +
Preference number: 3 (lower is better)
Translates to: IVNLKGSTCYAP*LTCWDGFPSQN
Trigger: GTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCCAGGGGGCGTAACAGGTGCTGCCTTTCAGATTAACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CAA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCAGAGTTAGGAGGTGGTTaGGCATTTTGGGTTTCTAAC +
Preference number: 3 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPELGGG*AFWVSN
Trigger: GTTAGAAACCCAAAATGCCAAACCACCTCCTAACTC...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR GCA 72 bp CAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTaGTGTGAACTCTGCTGGAAAAACTGTGTACCACTC +
Preference number: 3 (lower is better)
Translates to: QYHFPGVWGFRV*CELCWKNCVPL
Trigger: GAGTGGTACACAGTTTTTCCAGCAGAGTTCACAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CAA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGCAGTCACAGGATACCTaGCCGGGCTGGTGTGGAGAA +
Preference number: 3 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKQSQDT*PGWCGE
Trigger: TTCTCCACACCAGCCCGGCAAGGTATCCTGTGACTG...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CCA 72 bp GATGTTTTATGCCTACCTGGCAGGATACCAAGAACTTaGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTA +
Preference number: 3 (lower is better)
Translates to: DVLCLPGRIPRT*PPKLVWDCLSL
Trigger: TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCCAGGTAGGCATAAAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR-3UTR CAA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATGAGAGGCCTGGGATCTaGGCAGTCACAGGATACCTT +
Preference number: 3 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYERPGI*AVTGYL
Trigger: AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTC...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp AGGCCGAGGGCGAAGCAGGAGGGCAGCAGGCGCGCCAGGAAGCCCGGACATCTCCTGGTTCCACCAAGCTaGCATGGGGTCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RPRAKQEGSRRARKPGHLLVPPS*HGVSSF
Trigger: GAAGGAGCTGACCCCATGGCAGCTTGGTGGAACCAG...GAGATGTCCGGGCTTCCTGGCGCGCCTGCTGCCCTCCTGCTTCGCCCTCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS-3UTR GCA 90 bp TCCTCTGTAGCAGTCGGCAGGGCCCGGGCTGGGACATGGGAGGCCGAGGGCGAAGGCTGTAGCGGAGCCTaGAGCCTTCAGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSVAVGRARAGTWEAEGEGCSGA*SLQNSS
Trigger: GCTGGAGTTCTGAAGGCTGCAGGCTCCGCTACAGCC...TTCGCCCTCGGCCTCCCATGTCCCAGCCCGGGCCCTGCCGACTGCTACAGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS-3UTR TCA 90 bp CTGGCAGTACAGGGAGCTGACGTTGGGCTGGCTGTAGCGGAGCCTGCAGCCTTCAGCCCAGTGCCTCAGTaGCACAGCCACGGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: LAVQGADVGLAVAEPAAFSPVPQ*HSHGLR
Trigger: ACGGAGCCCGTGGCTGTGTCACTGAGGCACTGGGCT...GAAGGCTGCAGGCTCCGCTACAGCCAGCCCAACGTCAGCTCCCTGTACTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR CCA 90 bp GGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCGCCCAGCAATCTGGAGGGACTaGGGGAGCCAGGGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLDRPRGFGSKQARVTRPAIWRD*GSQGSR
Trigger: CCGGCTGCCCTGGCTCCCCCAGTCCCTCCAGATTGC...TGGGCGGGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CCA 90 bp AGCCGGCTCTTACCACCAGTCTCTCCGGCTCGGTGCCCCTTGGCCCGACTCTTGCCTCCAGGCCCGTCCTaGTTCCACCAAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: SRLLPPVSPARCPLARLLPPGPS*FHQAAM
Trigger: CATGGCAGCTTGGTGGAACCAGGACGGGCCTGGAGG...CAAGAGTCGGGCCAAGGGGCACCGAGCCGGAGAGACTGGTGGTAAGAGCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS-3UTR CCA 90 bp AGGCCGAGGGCGAAGCAGGAGGGCAGCAGGCGCGCCAGGAAGCCCGGACATCTCGACCAGGCGGAGCTGTaGTTGAGGATGTACGTGATG +
Preference number: 4 (lower is better)
Translates to: RPRAKQEGSRRARKPGHLDQAEL*LRMYVM
Trigger: CATCACGTACATCCTCAACCACAGCTCCGCCTGGTC...GAGATGTCCGGGCTTCCTGGCGCGCCTGCTGCCCTCCTGCTTCGCCCTCGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS-3UTR CCA 90 bp AGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGGCCCGGGCTGGGACATaGGAGGCCGAGGGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: RHLLAVSLPRCVGVQGLLARAGT*EAEGEA
Trigger: TGCTTCGCCCTCGGCCTCCCATGTCCCAGCCCGGGC...CAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAGCAGGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp AGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGGACAGCTGCAGGGAGTaGTTCCGGGCCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RHLLAVSLPRCVGVQGLLDSCRE*FRAQGS
Trigger: GCTGCCCTGGGCCCGGAATCACTCCCTGCAGCTGTC...CAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAGCAGGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGGGACTCCTGGAGGCTaGTCAGGGCATGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPGTPGG*SGHGRA
Trigger: TGCACGCCCATGCCCTGAGCAGCCTCCAGGAGTCCC...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CTGGCAGTACAGGGAGCTGACGTTGGGCTGGCTGTAGCGGAGCCTGCAGCCTTCCTTGCCAGGCCCAGCTaGTCCAGGACGGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LAVQGADVGLAVAEPAAFLARPS*SRTGSV
Trigger: AACACTTCCCGTCCTGGAGCAGCTGGGCCTGGCAAG...GAAGGCTGCAGGCTCCGCTACAGCCAGCCCAACGTCAGCTCCCTGTACTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR GCA 90 bp AGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGCGTCGCCTGGACTGTTaGGGCTGCTGCCCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RHLLAVSLPRCVGVQGLLRRLDC*GCCPGS
Trigger: GCTACCCGGGCAGCAGCCGCAACAGTCCAGGCGACG...CAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAGCAGGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GGCTCACCTGCTGGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATGTGCGAGTAGTCCCCTaGCTCCCAGCGGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GSPAGMVSQAKTGREAWDVRVVP*LPAASS
Trigger: CGAGCTGGCCGCTGGGAGCCAGGGGACTACTCGCAC...ATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GGTACACGACGGGATGCAACCCAGCCCCAGAGCCTCCTGCCTCCCGCGGGAATGGCTTTGTCTTCTCTCTaGGCCAGCCACAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: GTRRDATQPQSLLPPAGMALSSL*ASHRRC
Trigger: GCACCTTCTGTGGCTGGCCCAGAGAGAAGACAAAGC...CATTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTGCATCCCGTCGTGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR CCA 90 bp GGTACACGACGGGATGCAACCCAGCCCCAGAGCCTCCTGCCTCCCGCGGGAATGCCTACCTCCCTCCTCTaGAAAGCCGTGCAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GTRRDATQPQSLLPPAGMPTSLL*KAVQVR
Trigger: TCTGACTTGCACGGCTTTCCAGAGGAGGGAGGTAGG...CATTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTGCATCCCGTCGTGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR CCA 90 bp GCCTTGAGCCGGCTCTTACCACCAGTCTCTCCGGCTCGGTGCCCCTTGGCCCGAACATTGCCCAAGTGCTaGCAGTACAGGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: ALSRLLPPVSPARCPLARTLPKC*QYRELT
Trigger: CGTCAGCTCCCTGTACTGCCAGCACTTGGGCAATGT...TCGGGCCAAGGGGCACCGAGCCGGAGAGACTGGTGGTAAGAGCCGGCTCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS-3UTR TCA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGGAGGACTCGAGCCTTaGCCCCCATCCAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPGGLEP*PPSRAV
Trigger: CACTGCTCTGGATGGGGGTCAAGGCTCGAGTCCTCC...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp AGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGGATAGGAGCGGCGCTTaGTCTCCCTCTCCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: RHLLAVSLPRCVGVQGLLDRSGA*SPSPAR
Trigger: GCGCGCTGGAGAGGGAGAGCAAGCGCCGCTCCTATC...CAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAGCAGGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTCAGAAGGCCGGGATCTaGAGGTTCGGGGAGATCCCC +
Preference number: 4 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPQKAGI*RFGEIP
Trigger: GGGGATCTCCCCGAACCTCCAGATCCCGGCCTTCTG...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGCCCGGGCTGGGACATaGGAGGCCGAGGGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQARAGT*EAEGEA
Trigger: TGCTTCGCCCTCGGCCTCCCATGTCCCAGCCCGGGC...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CAA 72 bp GAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTaGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTC +
Preference number: 4 (lower is better)
Translates to: ERGLGSWQSQDT*PGWCGEPSSPV
Trigger: GACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp GTAGACGGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCGGAGGACTCGAGCCTTaGCCCCCATCCAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: VDGLDRPRGFGSKQARVTGGLEP*PPSRAV
Trigger: CACTGCTCTGGATGGGGGTCAAGGCTCGAGTCCTCC...GGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCCGTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTCTTGCCTCGCACACCTaGCTCTGGGCCACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWALASHT*LWATCR
Trigger: TCTGCAGGTGGCCCAGAGTCAGGTGTGCGAGGCAAG...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp GGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCGCCCAAGGTTCAGCAGCATGTaGCAACCCTTCCGGGACACG +
Preference number: 4 (lower is better)
Translates to: GLDRPRGFGSKQARVTRPRFSSM*QPFRDT
Trigger: CGTGTCCCGGAAGGGTTGGCACATGCTGCTGAACCT...TGGGCGGGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCGTCTCTCCGGCTCGGTaGCCCTTGGCCCGACTCTTG +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPVSPAR*PLARLL
Trigger: CAAGAGTCGGGCCAAGGGGCACCGAGCCGGAGAGAC...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp GGCTCACCTGCTGGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATGACTGTTGCGGCTGCTaGCCGGGTAGCTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: GSPAGMVSQAKTGREAWDDCCGC*PGSCQT
Trigger: CGTCTGACAGCTACCCGGGCAGCAGCCGCAACAGTC...ATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp GTAGACGGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCTGGACTGTTGCGGCTaGTGCCCGGGTAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VDGLDRPRGFGSKQARVTLDCCG*CPGSCQ
Trigger: CTGACAGCTACCCGGGCAGCAGCCGCAACAGTCCAG...GGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCCGTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp TGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGACGTCGCCTGGACTGTTaGGGCTGCTGCCCGGGTAGC +
Preference number: 4 (lower is better)
Translates to: WFPKPKLGERPGILAVTGRRLDC*GCCPGS
Trigger: GCTACCCGGGCAGCAGCCGCAACAGTCCAGGCGACG...TCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GGCTCACCTGCTGGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCGCCACTTAGTCCCTTaGGCCGCTCCCCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: GSPAGMVSQAKTGREAWDRHLVP*AAPQST
Trigger: AGTGCTCTGGGGAGCGGCCCAAGGGACTAAGTGGCG...ATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTCCTTCACAGCGAAGCTaGGACTCCTGGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPPSQRS*DSWRLL
Trigger: GAGCAGCCTCCAGGAGTCCCAGCTTCGCTGTGAAGG...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GACGTTGGGCTGGCTGTAGCGGAGCCTGCAGCCTTCAGAACTCCAGCCTCCAGGCCAGCATCAGGTTGCTaGCCATGTCCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: DVGLAVAEPAAFRTPASRPASGC*PCPPSP
Trigger: AGGTGATGGTGGACATGGCCAGCAACCTGATGCTGG...CCTGGAGGCTGGAGTTCTGAAGGCTGCAGGCTCCGCTACAGCCAGCCCAACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR TCA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGGCGAAGGGATGGGATaGGGTAGTGGGTGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPGEGMG*GSGCAV
Trigger: AACTGCACACCCACTACCTCATCCCATCCCTTCGCC...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CCGCGGGAATGCATTCAGCTCCATAAGCACGGCCACATTGCCCAAGTGCTGGCACACGTCCATCATGTCTaGGAAGCTGGCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PRECIQLHKHGHIAQVLAHVHHV*EAGGLC
Trigger: GCAGAGGCCGCCAGCTTCTCAGACATGATGGACGTG...TGCCAGCACTTGGGCAATGTGGCCGTGCTTATGGAGCTGAATGCATTCCCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR TCA 90 bp CAGAGTAGCAGCAAAGCCGTGCAGGGGTACACGACGGGATGCAACCCAGCCCCACCTCCACCAGCTCCTTaGTCTGGTCAACGTAACCCA +
Preference number: 4 (lower is better)
Translates to: QSSSKAVQGYTTGCNPAPPPPAP*SGQRNP
Trigger: TGGGTTACGTTGACCAGATCAAGGAGCTGGTGGAGG...TGGGGCTGGGTTGCATCCCGTCGTGTACCCCTGCACGGCTTTGCTGCTACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR TCA 90 bp CCGCGGGAATGCATTCAGCTCCATAAGCACGGCCACATTGCCCAAGTGCTGGCACGGAACCTAAGCTGCTaGTCAGCTAGGGGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: PRECIQLHKHGHIAQVLARNLSC*SARGSG
Trigger: GCCCGAACCCCTAGCTGATCAGCAGCTTAGGTTCCG...TGCCAGCACTTGGGCAATGTGGCCGTGCTTATGGAGCTGAATGCATTCCCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR TCA 90 bp TCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGAGCCCAGTGCCTCAGTaGCACAGCCACGGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: SQRVWRLPCSVLSLDQSWSPVPQ*HSHGLR
Trigger: ACGGAGCCCGTGGCTGTGTCACTGAGGCACTGGGCT...CCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR TCA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACGGGGCAGCCAGCGCTaGGACACCGCCAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLRGSQR*DTAKAP
Trigger: TGGTGCCTTGGCGGTGTCTCAGCGCTGGCTGCCCCG...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCAGGGACTCCTGGAGGCTaGTCAGGGCATGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPGTPGG*SGHGRA
Trigger: TGCACGCCCATGCCCTGAGCAGCCTCCAGGAGTCCC...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp TGCAACCCAGCCCCAGAGCCTCCTGCCTCCCGCGGGAATGCATTCAGCTCCATACCAGGGCACCCACAATaGCACTGCAGGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: CNPAPEPPASRGNAFSSIPGHPQ*HCRLCL
Trigger: AAGACAAAGCCTGCAGTGGCATTGTGGGTGCCCTGG...TATGGAGCTGAATGCATTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR CCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCCAGAAGGCCGGGATCTaGAGGTTCGGGGAGATCCCC +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPQKAGI*RFGEIP
Trigger: GGGGATCTCCCCGAACCTCCAGATCCCGGCCTTCTG...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCGGCAGGCGGTCACCCTaGAACACCACTTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPGRRSP*NTTWRR
Trigger: CCTTCGCCAAGTGGTGTTCCAGGGTGACCGCCTGCC...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTCCCTTCCGGGACACGTaGATGGAGCTGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWAPFRDT*MELWLR
Trigger: CCTCAACCACAGCTCCATCCACGTGTCCCGGAAGGG...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GGACTTGAGAGAGGCTGGTCCCTCCCCCAACACTGGGGATCCATCCTCTGTAGCGAAGGCACCAAGGCTTaGACGCCACACCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: GLERGWSLPQHWGSILCSEGTKA*TPHQPT
Trigger: TGTTGGCTGGTGTGGCGTCCAAGCCTTGGTGCCTTC...GCTACAGAGGATGGATCCCCAGTGTTGGGGGAGGGACCAGCCTCTCTCAAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS-3UTR CCA 90 bp GGCTCACCTGCTGGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATGGACTTGAGAGAGGCTaGTCCCTCCCCCAACACTGG +
Preference number: 4 (lower is better)
Translates to: GSPAGMVSQAKTGREAWDGLERG*SLPQHW
Trigger: CCAGTGTTGGGGGAGGGACCAGCCTCTCTCAAGTCC...ATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCGCCCATCCACAGAGATGTGCTaGGCATGGGGGCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GLDRPRGFGSKQARVTRPSTEMC*AWGLRA
Trigger: TGCTCTTAGCCCCCATGCCCAGCACATCTCTGTGGA...TGGGCGGGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCAGGACGCCACTACTCCTaGGCCTGGTGGAACCCCTCA +
Preference number: 4 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPGRHYS*AWWNPS
Trigger: TGAGGGGTTCCACCAGGCTCAGGAGTAGTGGCGTCC...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp GGCTCACCTGCTGGGATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATGCCAGCCACAGAAGGTaGTCATCCACCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: GSPAGMVSQAKTGREAWDASHRR*SSTSIR
Trigger: CCTGATGCTGGTGGATGAGCACCTTCTGTGGCTGGC...ATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATCCCAGCAGGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCCTTGCCAGGCCCAGCTaGTCCAGGACGGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPLARPS*SRTGSV
Trigger: AACACTTCCCGTCCTGGAGCAGCTGGGCCTGGCAAG...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR GCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTGTCTCTCCGGCTCGGTaGCCCTTGGCCCGACTCTTG +
Preference number: 4 (lower is better)
Translates to: IMGPISASMASSLLCPLTVSPAR*PLARLL
Trigger: CAAGAGTCGGGCCAAGGGGCACCGAGCCGGAGAGAC...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCACGCCACTTAGTCCCTTaGGCCGCTCCCCAGAGCACT +
Preference number: 4 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPRHLVP*AAPQST
Trigger: AGTGCTCTGGGGAGCGGCCCAAGGGACTAAGTGGCG...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTAGTGCGAGTAGTCCCCTaGCTCCCAGCGGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLVRVVP*LPAASS
Trigger: CGAGCTGGCCGCTGGGAGCCAGGGGACTACTCGCAC...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGCTTTGTCTTCTCTCTaGGCCAGCCACAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPALSSL*ASHRRC
Trigger: GCACCTTCTGTGGCTGGCCCAGAGAGAAGACAAAGC...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CAGAGTAGCAGCAAAGCCGTGCAGGGGTACACGACGGGATGCAACCCAGCCCCATTCACAGAGATGTGCTaGGCATGGGGGCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QSSSKAVQGYTTGCNPAPFTEMC*AWGLRA
Trigger: TGCTCTTAGCCCCCATGCCCAGCACATCTCTGTGAA...TGGGGCTGGGTTGCATCCCGTCGTGTACCCCTGCACGGCTTTGCTGCTACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR CCA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGCCTCCAGGCCCGTCCTaGTTCCACCAAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQPPGPS*FHQAAM
Trigger: CATGGCAGCTTGGTGGAACCAGGACGGGCCTGGAGG...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CCA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTACATTGCCCAAGTGCTaGCAGTACAGGGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPTLPKC*QYRELT
Trigger: CGTCAGCTCCCTGTACTGCCAGCACTTGGGCAATGT...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CCA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTGAAGGCACCAAGGCTTaGACGCCACACCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWAEGTKA*TPHQPT
Trigger: TGTTGGCTGGTGTGGCGTCCAAGCCTTGGTGCCTTC...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCGCCACTGCTGCCACTTaGGGAGGACTTGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPATAAT*GGLERG
Trigger: GCCTCTCTCAAGTCCTCCCCAAGTGGCAGCAGTGGC...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp GACGTTGGGCTGGCTGTAGCGGAGCCTGCAGCCTTCAGAACTCCAGCCTCCAGGCTTGATGTGGAAGGATaGCAGAGAAATGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: DVGLAVAEPAAFRTPASRLDVEG*QRNVGP
Trigger: AGGCCCAACATTTCTCTGTCATCCTTCCACATCAAG...CCTGGAGGCTGGAGTTCTGAAGGCTGCAGGCTCCGCTACAGCCAGCCCAACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR TCA 90 bp CGCGGGAATGCATTCAGCTCCATAAGCACGGCCACATTGCCCAAGTGCTGGCAGTGGTTCCTGCAAATATaGCTGGGGTGGCCACACCAC +
Preference number: 4 (lower is better)
Translates to: RGNAFSSISTATLPKCWQWFLQI*LGWPHH
Trigger: GTGGTGTGGCCACCCCAGTCATATTTGCAGGAACCA...CTGCCAGCACTTGGGCAATGTGGCCGTGCTTATGGAGCTGAATGCATTCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR TCA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTACATGGCTCCGTAAGTaGAGGCCTGCACACAAGAAG +
Preference number: 4 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPTWLRK*RPAHKK
Trigger: CTTCTTGTGTGCAGGCCTTCACTTACGGAGCCATGT...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTCGTCTGGCACAGTGGTaGGTGAAGACAAACAGACCA +
Preference number: 4 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPRLAQW*VKTNRP
Trigger: TGGTCTGTTTGTCTTCACTCACCACTGTGCCAGACG...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTAGGAAGGCTCCAGGCTaGACAGTGCTGATGACATTG +
Preference number: 4 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPRKAPG*TVLMTL
Trigger: CAATGTCATCAGCACTGTGCAGCCTGGAGCCTTCCT...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTCCTTCTTGCTGGTGTTaGCTTGGACTGTGGACACGG +
Preference number: 4 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWAPSCWC*LGLWTR
Trigger: CCGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGG...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGCAGCTCGGTCACACCTaGGTGAGGCTCGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKQLGHT*VRLGYP
Trigger: CGGGTACCCGAGCCTCACGCAGGTGTGACCGAGCTG...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACAGCTCGGTCACACCTaGGTGAGGCTCGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLQLGHT*VRLGYP
Trigger: CGGGTACCCGAGCCTCACGCAGGTGTGACCGAGCTG...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCCTGGTTCCACCAAGCTaGCATGGGGTCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPLVPPS*HGVSSF
Trigger: GAAGGAGCTGACCCCATGGCAGCTTGGTGGAACCAG...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR GCA 90 bp AGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACTGCTGAGGGATGATAGGAGCGGCGCTTaGTCTCCCTCTCCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: RTWPPKLVWDCLSLLLRDDRSGA*SPSPAR
Trigger: GCGCGCTGGAGAGGGAGAGCAAGCGCCGCTCCTATC...ATCCCTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp GTAGACGGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCTCCCGCTATGGCCTCTaGACCAGTTACACTGGCATC +
Preference number: 4 (lower is better)
Translates to: VDGLDRPRGFGSKQARVTSRYGL*TSYTGI
Trigger: GATGCCAGTGTAACTGGTGCAGAGGCCATAGCGGGA...GGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCCGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCAGGTGATGGTGCCGTTTaGCAGAAGGCCGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPGDGAV*QKAGIW
Trigger: CCAGATCCCGGCCTTCTGCCAAACGGCACCATCACC...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GTAGACGGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCACTTGGCGAAGGGATaGGATGAGGTAGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VDGLDRPRGFGSKQARVTHLAKG*DEVVGV
Trigger: CACACCCACTACCTCATCCCATCCCTTCGCCAAGTG...GGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCCGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCCGTTGCCCAAGTAGCTaGCTGAGCACTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPRCPSS*LSTGRA
Trigger: TGCCCTTCCAGTGCTCAGCCAGCTACTTGGGCAACG...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GTAGACGGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCCATTGTGGTACCAGTaGATCCGGGTATCGTTGCCC +
Preference number: 4 (lower is better)
Translates to: VDGLDRPRGFGSKQARVTPLWYQ*IRVSLP
Trigger: GGGCAACGATACCCGGATCCACTGGTACCACAATGG...GGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCCGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTGCTTTGTCTTCTCTCTaGGCCAGCCACAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWAALSSL*ASHRRC
Trigger: GCACCTTCTGTGGCTGGCCCAGAGAGAAGACAAAGC...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTTTGCAGGGTGCAATCTaGAGGGACTGGGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PKPKLGERPGILAVTGYLLQGAI*RDWGSQ
Trigger: CTGGCTCCCCCAGTCCCTCCAGATTGCACCCTGCAA...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CCA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTGGACTTGAGAGAGGCTaGTCCCTCCCCCAACACTGG +
Preference number: 4 (lower is better)
Translates to: PKPKLGERPGILAVTGYLGLERG*SLPQHW
Trigger: CCAGTGTTGGGGGAGGGACCAGCCTCTCTCAAGTCC...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTGCCACTGCTGCCACTTaGGGAGGACTTGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PKPKLGERPGILAVTGYLATAAT*GGLERG
Trigger: GCCTCTCTCAAGTCCTCCCCAAGTGGCAGCAGTGGC...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTATGCCACGGGAGCCGGTaGGCTCTGGCTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLCHGSR*ALALHL
Trigger: GAGATGGAGAGCCAGAGCCCACCGGCTCCCGTGGCA...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CAA 72 bp GAGCAGCCTGGACCCAGGCGCTGCCTCAGAGTGTGGTaGGGTTTCAGCGAGTTAGGAGGTGGTTTGGCATTT +
Preference number: 4 (lower is better)
Translates to: EQPGPRRCLRVW*GFSELGGGLAF
Trigger: AAATGCCAAACCACCTCCTAACTCGCTGAAACCCAACCACACTCTGAGGCAGCGCCTGGGTCCAGGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CAA 72 bp CGCGGGAATGCATTCAGCTCCATAAGCACGGCCACATaGCCCAAGTGCTGGCAGTACAGGGAGCTGACGTTG +
Preference number: 4 (lower is better)
Translates to: RGNAFSSISTAT*PKCWQYRELTL
Trigger: CAACGTCAGCTCCCTGTACTGCCAGCACTTGGGCAATGTGGCCGTGCTTATGGAGCTGAATGCATTCCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR TCA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCAGGCGAAGGGATGGGATaGGGTAGTGGGTGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPGEGMG*GSGCAV
Trigger: AACTGCACACCCACTACCTCATCCCATCCCTTCGCC...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp GGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCGCCCACTTGATGTGGAAGGATaGCAGAGAAATGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLDRPRGFGSKQARVTRPLDVEG*QRNVGP
Trigger: AGGCCCAACATTTCTCTGTCATCCTTCCACATCAAG...TGGGCGGGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR TCA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTAAAGACGGCCATTTCTaGAGACCAGCAGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWAKDGHF*RPAVAG
Trigger: CCCTGCAACTGCTGGTCTTCAGAAATGGCCGTCTTT...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR TCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGGTTCCTGCAAATATaGCTGGGGTGGCCACACCAC +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPWFLQI*LGWPHH
Trigger: GTGGTGTGGCCACCCCAGTCATATTTGCAGGAACCA...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR GCA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTGCCAGCCACAGAAGGTaGTCATCCACCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: PKPKLGERPGILAVTGYLASHRR*SSTSIR
Trigger: CCTGATGCTGGTGGATGAGCACCTTCTGTGGCTGGC...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp GGGAATGCATTCAGCTCCATAAGCACGGCCACATTGCCCAAGTGCTGGCAGTACGCCAGCCACAGAAGGTaGTCATCCACCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: GNAFSSISTATLPKCWQYASHRR*SSTSIR
Trigger: CCTGATGCTGGTGGATGAGCACCTTCTGTGGCTGGC...GTACTGCCAGCACTTGGGCAATGTGGCCGTGCTTATGGAGCTGAATGCATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR GCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCCCAGGGCACCCACAATaGCACTGCAGGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPPGHPQ*HCRLCL
Trigger: AAGACAAAGCCTGCAGTGGCATTGTGGGTGCCCTGG...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp TGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGAAGGTTCAGCAGCATGTaGCAACCCTTCCGGGACACG +
Preference number: 4 (lower is better)
Translates to: WFPKPKLGERPGILAVTGRFSSM*QPFRDT
Trigger: CGTGTCCCGGAAGGGTTGGCACATGCTGCTGAACCT...TCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTGGCTGTTGTGCAAACTaGCGCTCTCACTGGACAACA +
Preference number: 4 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWAGCCAN*RSHWTT
Trigger: TGTTGTCCAGTGAGAGCGGCAGTTTGCACAACAGCC...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGCCCTGGAACACCACTTaGCGAAGGGATGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQPWNTT*RRDGMR
Trigger: CCTCATCCCATCCCTTCGCCAAGTGGTGTTCCAGGG...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GTAGACGGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCATAGGAGCCCCATTGTaGTACCAGTGGATCCGGGTA +
Preference number: 4 (lower is better)
Translates to: VDGLDRPRGFGSKQARVTIGAPL*YQWIRV
Trigger: TACCCGGATCCACTGGTACCACAATGGGGCTCCTAT...GGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCCGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CAGCTCCATAAGCACGGCCACATTGCCCAAGTGCTGGCAGTACAGGGAGCTGACATGACAGAGAAATGTTaGGCCTCCCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QLHKHGHIAQVLAVQGADMTEKC*ASQWCS
Trigger: GCTGCACCACTGGGAGGCCCAACATTTCTCTGTCAT...GTCAGCTCCCTGTACTGCCAGCACTTGGGCAATGTGGCCGTGCTTATGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR CCA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGGGGTTGAGAACAGGCTaGGGGGCAGCTGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKGLRTG*GAAGWR
Trigger: CCTCCATCCAGCTGCCCCCCAGCCTGTTCTCAACCC...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CCA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCATCCCTCCCCCAACACTaGGGATCCATCCTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPSLPQH*GSILCS
Trigger: GCTACAGAGGATGGATCCCCAGTGTTGGGGGAGGGA...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGTCCCTCCCCCAACACTaGGGATCCATCCTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQSLPQH*GSILCS
Trigger: GCTACAGAGGATGGATCCCCAGTGTTGGGGGAGGGA...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGAAACTGCCGCTCTCACTaGACAACAGCTCGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: WFPKPKLGERPGILAVTGNCRSH*TTAREL
Trigger: GAGCTCCCGAGCTGTTGTCCAGTGAGAGCGGCAGTT...TCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTATGGAAGACCGTCGCCTaGACTGTTGCGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLWKTVA*TVAAAA
Trigger: GGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCA...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CAA 72 bp AGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTaGATCAGAGCTGGGATCCCTGCTACTTCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SEYGVFPALSSH*IRAGIPATSQC
Trigger: GCACTGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTGCCCACACACCAATGTaGGACAGGGTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IMGPISASMASSLLCPLTAHTPM*DRVSSL
Trigger: CAGTGAGCTGACCCTGTCTCACATTGGTGTGTGGGC...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp AGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACTGCTGAGGGATCACGTCCATCATGTCTaGGAAGCTGGCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RTWPPKLVWDCLSLLLRDHVHHV*EAGGLC
Trigger: GCAGAGGCCGCCAGCTTCTCAGACATGATGGACGTG...ATCCCTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTCTATCTCCACCTTCTTaGTGGTGTTGCCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWALSPPS*WCCLGL
Trigger: CAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAG...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CGCGGGAATGCATTCAGCTCCATAAGCACGGCCACATTGCCCAAGTGCTGGCAGGAATTCACAGAGATGTaGTGGGCATGGGGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: RGNAFSSISTATLPKCWQEFTEM*WAWGLR
Trigger: TCTTAGCCCCCATGCCCAGCACATCTCTGTGAATTC...CTGCCAGCACTTGGGCAATGTGGCCGTGCTTATGGAGCTGAATGCATTCCCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR GCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTGCCACATTGCCCAAGTaGTGGCAGTACAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: IMGPISASMASSLLCPLTATLPK*WQYREL
Trigger: CAGCTCCCTGTACTGCCAGCACTTGGGCAATGTGGC...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR GCA 90 bp CCGGACATCTCTACGTCTGGCACAGTGGTGAGTGAAGACAAACAGACCAAGAGCGCCACATTGCCCAAGTaGTGGCAGTACAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PDISTSGTVVSEDKQTKSATLPK*WQYREL
Trigger: CAGCTCCCTGTACTGCCAGCACTTGGGCAATGTGGC...GCTCTTGGTCTGTTTGTCTTCACTCACCACTGTGCCAGACGTAGAGATGTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS-3UTR GCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGGCATCCTCATACTTaGCCCCTTTGGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: IMGPISASMASSLLCPLTWHPHT*PLWGHR
Trigger: ACGGTGCCCCCAAAGGGGGCAAGTATGAGGATGCCA...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp TCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGTGCCTCCCGCGGGAATaGATTCAGCTCCACAGAGAT +
Preference number: 4 (lower is better)
Translates to: SQRVWRLPCSVLSLDQSWCLPRE*IQLHRD
Trigger: ATCTCTGTGGAGCTGAATGCATTCCCGCGGGAGGCA...CCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGACACTTGGCGAAGGGATaGGATGAGGTAGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: WFPKPKLGERPGILAVTGHLAKG*DEVVGV
Trigger: CACACCCACTACCTCATCCCATCCCTTCGCCAAGTG...TCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGTTGCTGGTGTTGCCTTaGACTGTGGACACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SQRVWRLPCSVLSLDQSWLLVLP*TVDTEH
Trigger: GTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAA...CCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTTCACAGAGATGTGCTaGGCATGGGGGCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPFTEMC*AWGLRA
Trigger: TGCTCTTAGCCCCCATGCCCAGCACATCTCTGTGAA...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CCA 90 bp TCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGCCTACCTCCCTCCTCTaGAAAGCCGTGCAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SQRVWRLPCSVLSLDQSWPTSLL*KAVQVR
Trigger: TCTGACTTGCACGGCTTTCCAGAGGAGGGAGGTAGG...CCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CCA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCATGACAGAGAAATGTTaGGCCTCCCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPMTEKC*ASQWCS
Trigger: GCTGCACCACTGGGAGGCCCAACATTTCTCTGTCAT...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR TCA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCATGCTCAAGAGCAAGGTaGTGGTGCCGTTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPCSRAR*WCRLAE
Trigger: TTCTGCCAAACGGCACCATCACCTTGCTCTTGAGCA...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGTGCTCAAGAGCAAGGTaGTGGTGCCGTTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQCSRAR*WCRLAE
Trigger: TTCTGCCAAACGGCACCATCACCTTGCTCTTGAGCA...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTAGCCCACACACCAATGTaGGACAGGGTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLAHTPM*DRVSSL
Trigger: CAGTGAGCTGACCCTGTCTCACATTGGTGTGTGGGC...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGTCAAGGGCACAGAGGTaGAGGGGTACTGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQSRAQR*RGTVNR
Trigger: CCTGTTTACAGTACCCCTTCACCTCTGTGCCCTTGA...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTTCAAGGGCACAGAGGTaGAGGGGTACTGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: PKPKLGERPGILAVTGYLSRAQR*RGTVNR
Trigger: CCTGTTTACAGTACCCCTTCACCTCTGTGCCCTTGA...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGCGGGGCAGCCAGCGCTaGGACACCGCCAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKRGSQR*DTAKAP
Trigger: TGGTGCCTTGGCGGTGTCTCAGCGCTGGCTGCCCCG...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTAGGAAGGCTCCAGGCTaGACAGTGCTGATGACATTG +
Preference number: 4 (lower is better)
Translates to: PKPKLGERPGILAVTGYLRKAPG*TVLMTL
Trigger: CAATGTCATCAGCACTGTGCAGCCTGGAGCCTTCCT...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGTCTCCACCTTCTTGCTaGTGTTGCCTTGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQSPPSC*CCLGLW
Trigger: CCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGA...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTGAGGTCATGGCCATATaGAAACAAAGGTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWAEVMAI*KQRFSS
Trigger: GCTGCTGAACCTTTGTTTCCATATGGCCATGACCTC...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCACCTGTTACCCTGCTTTaGATTCTGGGCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPPVTLL*ILGHMA
Trigger: AGCCATGTGGCCCAGAATCCAAAGCAGGGTAACAGG...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACCTCCACCAGCTCCTTaGTCTGGTCAACGTAACCCA +
Preference number: 4 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLPPPAP*SGQRNP
Trigger: TGGGTTACGTTGACCAGATCAAGGAGCTGGTGGAGG...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CCGCGGGAATGCATTCAGCTCCATAAGCACGGCCACATTGCCCAAGTGCTGGCACAGTGCCACATTTCTTaGATTCACAGAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: PRECIQLHKHGHIAQVLAQCHIS*IHRDVL
Trigger: CAGCACATCTCTGTGAATTCAAGAAATGTGGCACTG...TGCCAGCACTTGGGCAATGTGGCCGTGCTTATGGAGCTGAATGCATTCCCGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR TCA 90 bp CCGGACATCTCTACGTCTGGCACAGTGGTGAGTGAAGACAAACAGACCAAGAGCACATGGCTCCGTAAGTaGAGGCCTGCACACAAGAAG +
Preference number: 4 (lower is better)
Translates to: PDISTSGTVVSEDKQTKSTWLRK*RPAHKK
Trigger: CTTCTTGTGTGCAGGCCTTCACTTACGGAGCCATGT...GCTCTTGGTCTGTTTGTCTTCACTCACCACTGTGCCAGACGTAGAGATGTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS-3UTR TCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTCGTCTGGCACAGTGGTaGGTGAAGACAAACAGACCA +
Preference number: 4 (lower is better)
Translates to: IMGPISASMASSLLCPLTRLAQW*VKTNRP
Trigger: TGGTCTGTTTGTCTTCACTCACCACTGTGCCAGACG...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGCTGAAGACCAGCAGTTaGAGGGTGCAATCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKLKTSS*RVQSGG
Trigger: CCCTCCAGATTGCACCCTGCAACTGCTGGTCTTCAG...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR GCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTTCTTCCAGAGGGGGTaGCCTCCAACTAAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: IMGPISASMASSLLCPLTFFQRG*PPTKLL
Trigger: AAGGAGCTTAGTTGGAGGGCACCCCCTCTGGAAGAA...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCAGAGATCCTGTTACCCTaGTTTGGATTCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPEILLP*FGFWAT
Trigger: TGTGGCCCAGAATCCAAAGCAGGGTAACAGGATCTC...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGGACTGTTGCGGCTGCTaGCCGGGTAGCTGTCAGACG +
Preference number: 4 (lower is better)
Translates to: PLIVSVQQSINNGTHLSEDCCGC*PGSCQT
Trigger: CGTCTGACAGCTACCCGGGCAGCAGCCGCAACAGTC...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTCACAATCTTAAGGGCTaGCAGCTCATCAAAGACCCC +
Preference number: 4 (lower is better)
Translates to: PKPKLGERPGILAVTGYLHNLKG*QLIKDP
Trigger: GGGGTCTTTGATGAGCTGCCAGCCCTTAAGATTGTG...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTATAGGAGCCCCATTGTaGTACCAGTGGATCCGGGTA +
Preference number: 4 (lower is better)
Translates to: IMGPISASMASSLLCPLTIGAPL*YQWIRV
Trigger: TACCCGGATCCACTGGTACCACAATGGGGCTCCTAT...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGTTGCTGGTGTTGCCTTaGACTGTGGACACGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKLLVLP*TVDTEH
Trigger: GTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAA...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGACGTGGATGGAGCTGTaGTTGAGGATGTACGTGATG +
Preference number: 4 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQTWMEL*LRMYVM
Trigger: CATCACGTACATCCTCAACCACAGCTCCATCCACGT...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTACGTGGATGGAGCTGTaGTTGAGGATGTACGTGATG +
Preference number: 4 (lower is better)
Translates to: PKPKLGERPGILAVTGYLTWMEL*LRMYVM
Trigger: CATCACGTACATCCTCAACCACAGCTCCATCCACGT...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGCCTCAGCTCTTCCCCTaGCTCCAGAGAGATCCTGTT +
Preference number: 4 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKPQLFP*LQRDPV
Trigger: AACAGGATCTCTCTGGAGCCAGGGGAAGAGCTGAGG...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTGGAAGACCGTCGCCTaGACTGTTGCGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PLIVSVQQSINNGTHLSEWKTVA*TVAAAA
Trigger: GGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCA...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTGAAATGTCTCAGAGGTaGGACAGCCAATCCGATTGT +
Preference number: 4 (lower is better)
Translates to: PKPKLGERPGILAVTGYLEMSQR*DSQSDC
Trigger: ACAATCGGATTGGCTGTCTCACCTCTGAGACATTTC...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGCACGTCCATCATGTCTaGGAAGCTGGCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLIVSVQQSINNGTHLSEHVHHV*EAGGLC
Trigger: GCAGAGGCCGCCAGCTTCTCAGACATGATGGACGTG...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGGCTCCTTCAGCCCAGTaGCTCAGTGACACAGCCACG +
Preference number: 4 (lower is better)
Translates to: PLIVSVQQSINNGTHLSEAPSAQ*LSDTAT
Trigger: CGTGGCTGTGTCACTGAGGCACTGGGCTGAAGGAGC...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR GCA 90 bp AGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACTGCTGAGGGATTTCTTCCAGAGGGGGTaGCCTCCAACTAAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RTWPPKLVWDCLSLLLRDFFQRG*PPTKLL
Trigger: AAGGAGCTTAGTTGGAGGGCACCCCCTCTGGAAGAA...ATCCCTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGCCTTCACAGCGAAGCTaGGACTCCTGGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PLIVSVQQSINNGTHLSEPSQRS*DSWRLL
Trigger: GAGCAGCCTCCAGGAGTCCCAGCTTCGCTGTGAAGG...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGTCTCCACCTTCTTGCTaGTGTTGCCTTGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKSPPSC*CCLGLW
Trigger: CCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGA...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp AGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACTGCTGAGGGATTACACTCGCAGCTGGTaGGCCAACGTCAATGCATTG +
Preference number: 4 (lower is better)
Translates to: RTWPPKLVWDCLSLLLRDYTRSW*ANVNAL
Trigger: CAATGCATTGACGTTGGCCCACCAGCTGCGAGTGTA...ATCCCTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTATCATGTCTGAGAAGCTaGCGGCCTCTGCGGTATACA +
Preference number: 4 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLSCLRS*RPLRYT
Trigger: TGTATACCGCAGAGGCCGCCAGCTTCTCAGACATGA...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp AGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACTGCTGAGGGATCCTGTTACCCTGCTTTaGATTCTGGGCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: RTWPPKLVWDCLSLLLRDPVTLL*ILGHMA
Trigger: AGCCATGTGGCCCAGAATCCAAAGCAGGGTAACAGG...ATCCCTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGTGCCACGGGAGCCGGTaGGCTCTGGCTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKCHGSR*ALALHL
Trigger: GAGATGGAGAGCCAGAGCCCACCGGCTCCCGTGGCA...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGGGACGCCACTACTCCTaGGCCTGGTGGAACCCCTCA +
Preference number: 4 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKGRHYS*AWWNPS
Trigger: TGAGGGGTTCCACCAGGCTCAGGAGTAGTGGCGTCC...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp AGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACTGCTGAGGGATTGGCACAGTGGTGAGTaGAGACAAACAGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: RTWPPKLVWDCLSLLLRDWHSGE*RQTDQE
Trigger: CTCTTGGTCTGTTTGTCTTCACTCACCACTGTGCCA...ATCCCTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATCTTGCCTCGCACACCTaGCTCTGGGCCACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYLASHT*LWATCR
Trigger: TCTGCAGGTGGCCCAGAGTCAGGTGTGCGAGGCAAG...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGCTATCTCCACCTTCTTaGTGGTGTTGCCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKLSPPS*WCCLGL
Trigger: CAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAG...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGGAGATCCTGTTACCCTaGTTTGGATTCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKEILLP*FGFWAT
Trigger: TGTGGCCCAGAATCCAAAGCAGGGTAACAGGATCTC...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCCTGGACTGTTGCGGCTaGTGCCCGGGTAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSLDCCG*CPGSCQ
Trigger: CTGACAGCTACCCGGGCAGCAGCCGCAACAGTCCAG...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGGCAGGCGGTCACCCTaGAACACCACTTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSGRRSP*NTTWRR
Trigger: CCTTCGCCAAGTGGTGTTCCAGGGTGACCGCCTGCC...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGGAAATGTCTCAGAGGTaGGACAGCCAATCCGATTGT +
Preference number: 4 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKEMSQR*DSQSDC
Trigger: ACAATCGGATTGGCTGTCTCACCTCTGAGACATTTC...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATCGGAACCTAAGCTGCTaGTCAGCTAGGGGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYRNLSC*SARGSG
Trigger: GCCCGAACCCCTAGCTGATCAGCAGCTTAGGTTCCG...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR GCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGGCTGTAGCGGAGCCTaGAGCCTTCAGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSGCSGA*SLQNSS
Trigger: GCTGGAGTTCTGAAGGCTGCAGGCTCCGCTACAGCC...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR GCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGAGCTCCACAGAGATGTaGTGGGCATGGGGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: PLIVSVQQSINNGTHLSESSTEM*WAWGLR
Trigger: TCTTAGCCCCCATGCCCAGCACATCTCTGTGGAGCT...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGCCAGCATCAGGTTGCTaGCCATGTCCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: PLIVSVQQSINNGTHLSEPASGC*PCPPSP
Trigger: AGGTGATGGTGGACATGGCCAGCAACCTGATGCTGG...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCCCCTTCCGGGACACGTaGATGGAGCTGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSPFRDT*MELWLR
Trigger: CCTCAACCACAGCTCCATCCACGTGTCCCGGAAGGG...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTAGAGGTCATGGCCATATaGAAACAAAGGTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLEVMAI*KQRFSS
Trigger: GCTGCTGAACCTTTGTTTCCATATGGCCATGACCTC...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTAGACAGCAGAGGTCATaGCCATATGGAAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: IMGPISASMASSLLCPLTRQQRS*PYGNKG
Trigger: ACCTTTGTTTCCATATGGCCATGACCTCTGCTGTCT...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CAA 72 bp GGATGTTTTATGCCTACCTGGCAGGATACCAAGAACTaGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: GCFMPTWQDTKN*ATKTGLGLSVA
Trigger: AGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCCAGGTAGGCATAAAACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATTGGCATCCTCATACTTaGCCCCTTTGGGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYWHPHT*PLWGHR
Trigger: ACGGTGCCCCCAAAGGGGGCAAGTATGAGGATGCCA...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGACGCTATTCTTGATGTaGAAGGATGACAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: SQRVWRLPCSVLSLDQSWTLFLM*KDDREM
Trigger: CATTTCTCTGTCATCCTTCCACATCAAGAATAGCGT...CCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGGAAGGCACCAAGGCTTaGACGCCACACCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKEGTKA*TPHQPT
Trigger: TGTTGGCTGGTGTGGCGTCCAAGCCTTGGTGCCTTC...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCAACTGCCGCTCTCACTaGACAACAGCTCGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSNCRSH*TTAREL
Trigger: GAGCTCCCGAGCTGTTGTCCAGTGAGAGCGGCAGTT...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
3UTR CAA 72 bp CTAACTGAGGTTAGAAGTCAGATTATTAGCATGGCTTaGCCACAGGAGCCTCATGGAGGCATTTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LTEVRSQIISMA*PQEPHGGISPQ
Trigger: CTGAGGGGAAATGCCTCCATGAGGCTCCTGTGGCAAAGCCATGCTAATAATCTGACTTCTAACCTCAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATCCTCCACCAGCTCCTTaGTCTGGTCAACGTAACCCA +
Preference number: 4 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYPPPAP*SGQRNP
Trigger: TGGGTTACGTTGACCAGATCAAGGAGCTGGTGGAGG...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTGGCACAGTGGTGAGTaGAGACAAACAGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: PLIVSVQQSINNGTHLSEWHSGE*RQTDQE
Trigger: CTCTTGGTCTGTTTGTCTTCACTCACCACTGTGCCA...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATCCAGGGCACCCACAATaGCACTGCAGGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYPGHPQ*HCRLCL
Trigger: AAGACAAAGCCTGCAGTGGCATTGTGGGTGCCCTGG...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR GCA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGGAATTCACAGAGATGTaGTGGGCATGGGGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: PLIVSVQQSINNGTHLSEEFTEM*WAWGLR
Trigger: TCTTAGCCCCCATGCCCAGCACATCTCTGTGAATTC...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR GCA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATTCCCGCTATGGCCTCTaGACCAGTTACACTGGCATC +
Preference number: 4 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYSRYGL*TSYTGI
Trigger: GATGCCAGTGTAACTGGTGCAGAGGCCATAGCGGGA...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGCCATTGTGGTACCAGTaGATCCGGGTATCGTTGCCC +
Preference number: 4 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKPLWYQ*IRVSLP
Trigger: GGGCAACGATACCCGGATCCACTGGTACCACAATGG...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCCCAGCATCAGGTTGCTaGCCATGTCCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSPASGC*PCPPSP
Trigger: AGGTGATGGTGGACATGGCCAGCAACCTGATGCTGG...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGCCTCAGCTCTTCCCCTaGCTCCAGAGAGATCCTGTT +
Preference number: 4 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKPQLFP*LQRDPV
Trigger: AACAGGATCTCTCTGGAGCCAGGGGAAGAGCTGAGG...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TTATTAGCATGGGTGATGATGGTGGAGAAGAGACAGAGTAGCAGCAAAGCCGTGTGCCGTGGCTTGATGTaGAAGGATGACAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: LLAWVMMVEKRQSSSKAVCRGLM*KDDREM
Trigger: CATTTCTCTGTCATCCTTCCACATCAAGCCACGGCA...CACGGCTTTGCTGCTACTCTGTCTCTTCTCCACCATCATCACCCATGCTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR GCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGGCTGTTGTGCAAACTaGCGCTCTCACTGGACAACA +
Preference number: 4 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSGCCAN*RSHWTT
Trigger: TGTTGTCCAGTGAGAGCGGCAGTTTGCACAACAGCC...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGTCATGTCTGAGAAGCTaGCGGCCTCTGCGGTATACA +
Preference number: 4 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKSCLRS*RPLRYT
Trigger: TGTATACCGCAGAGGCCGCCAGCTTCTCAGACATGA...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCCACAATCTTAAGGGCTaGCAGCTCATCAAAGACCCC +
Preference number: 4 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSHNLKG*QLIKDP
Trigger: GGGGTCTTTGATGAGCTGCCAGCCCTTAAGATTGTG...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR TCA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCCAGTGCCACATTTCTTaGATTCACAGAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSQCHIS*IHRDVL
Trigger: CAGCACATCTCTGTGAATTCAAGAAATGTGGCACTG...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CCA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATAGACAGCAGAGGTCATaGCCATATGGAAACAAAGGT +
Preference number: 4 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYRQQRS*PYGNKG
Trigger: ACCTTTGTTTCCATATGGCCATGACCTCTGCTGTCT...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 90 bp AGGAGCGGCGCTTGCTCTCCCTCTCCAGCGCGCTGCCGCTGCCCTTaGGGTTGTCACGGCTGGCGCTGCGGCGCTGCCCGGGGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: RSGACSPSPARCRCP*GCHGWRCGAARGAP
Trigger: CGGGGCGCCCCGGGCAGCGCCGCAGCGCCAGCCGTGACAACCTCAAGGGCAGCGGCAGCGCGCTGGAGAGGGAGAGCAAGCGCCGCTCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 90 bp GCGCTGCCGCTGCCCTTGAGGTTGTCACGGCTGGCGCTGCGGCGCTaGCCGGGGCGCCCCGTCTCAGCGATTGGCGCGGCGCTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: ALPLPLRLSRLALRR*PGRPVSAIGAALVS
Trigger: TGACACAAGCGCCGCGCCAATCGCTGAGACGGGGCGCCCCGGGCAGCGCCGCAGCGCCAGCCGTGACAACCTCAAGGGCAGCGGCAGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp ACGGCTGGCGCTGCGGCGCTGCCCGGGGCGCCCCGTCTCAGCGATTaGCGCGGCGCTTGTGTCACTGCCCTCCGACGGCGTAAGCATGGG +
Preference number: 5 (lower is better)
Translates to: TAGAAALPGAPRLSD*RGACVTALRRRKHG
Trigger: CCCATGCTTACGCCGTCGGAGGGCAGTGACACAAGCGCCGCGCCAATCGCTGAGACGGGGCGCCCCGGGCAGCGCCGCAGCGCCAGCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp GGGAGATCCCCACCGCCGCACACCACCCTCCTTCGAGCCGGGTTGTaGGCGCCGCCACTTAGTCCCTTGGGCCGCTCCCCAGAGCACTTG +
Preference number: 5 (lower is better)
Translates to: GRSPPPHTTLLRAGL*APPLSPLGRSPEHL
Trigger: CAAGTGCTCTGGGGAGCGGCCCAAGGGACTAAGTGGCGGCGCCCACAACCCGGCTCGAAGGAGGGTGGTGTGCGGCGGTGGGGATCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 90 bp GCAGTTCCAGGGCCCCTTCACAGCGAAGCTGGGACTCCTGGAGGCTaGTCAGGGCATGGGCGTGCAGGGCACTGGGGTAGGCACAGAGTG +
Preference number: 5 (lower is better)
Translates to: AVPGPLHSEAGTPGG*SGHGRAGHWGRHRV
Trigger: CACTCTGTGCCTACCCCAGTGCCCTGCACGCCCATGCCCTGAGCAGCCTCCAGGAGTCCCAGCTTCGCTGTGAAGGGGCCCTGGAACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp CCGGGTAGCTGTCAGACGGGCTGTTGTGCAAACTGCCGCTCTCACTaGACAACAGCTCGGGAGCTCCTGGGGACGTGCCCGCGCGCAACG +
Preference number: 5 (lower is better)
Translates to: PGSCQTGCCANCRSH*TTARELLGTCPRAT
Trigger: CGTTGCGCGCGGGCACGTCCCCAGGAGCTCCCGAGCTGTTGTCCAGTGAGAGCGGCAGTTTGCACAACAGCCCGTCTGACAGCTACCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 90 bp GGGTTCGGGCTCCACTGGGGCATCCTGGCCGACGCTGCTTGGCTGTaGACCCGACACTCCTACCTCCCTCCTCTGGAAAGCCGTGCAAGT +
Preference number: 5 (lower is better)
Translates to: GFGLHWGILADAAWL*TRHSYLPPLESRAS
Trigger: ACTTGCACGGCTTTCCAGAGGAGGGAGGTAGGAGTGTCGGGTGCACAGCCAAGCAGCGTCGGCCAGGATGCCCCAGTGGAGCCCGAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS GCA 90 bp TGCGGCTGCTGCCCGGGTAGCTGTCAGACGGGCTGTTGTGCAAACTaGCGCTCTCACTGGACAACAGCTCGGGAGCTCCTGGGGACGTGC +
Preference number: 5 (lower is better)
Translates to: CGCCPGSCQTGCCAN*RSHWTTARELLGTC
Trigger: GCACGTCCCCAGGAGCTCCCGAGCTGTTGTCCAGTGAGAGCGGCAGTTTGCACAACAGCCCGTCTGACAGCTACCCGGGCAGCAGCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 90 bp TGGGCTCACCCTCGAGTGGAAGACCGTCGCCTGGACTGTTGCGGCTaGTGCCCGGGTAGCTGTCAGACGGGCTGTTGTGCAAACTGCCGC +
Preference number: 5 (lower is better)
Translates to: WAHPRVEDRRLDCCG*CPGSCQTGCCANCR
Trigger: GCGGCAGTTTGCACAACAGCCCGTCTGACAGCTACCCGGGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCACTCGAGGGTGAGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp GTTGTGCAAACTGCCGCTCTCACTGGACAACAGCTCGGGAGCTCCTaGGGACGTGCCCGCGCGCAACGCCTTGAGCCGGCTCTTACCACC +
Preference number: 5 (lower is better)
Translates to: VVQTAALTGQQLGSS*GRARAQRLEPALTT
Trigger: GGTGGTAAGAGCCGGCTCAAGGCGTTGCGCGCGGGCACGTCCCCAGGAGCTCCCGAGCTGTTGTCCAGTGAGAGCGGCAGTTTGCACAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp CGACGGCGTAAGCATGGGCTCACCCTCGAGTGGAAGACCGTCGCCTaGACTGTTGCGGCTGCTGCCCGGGTAGCTGTCAGACGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: RRRKHGLTLEWKTVA*TVAAAARVAVRRAV
Trigger: AACAGCCCGTCTGACAGCTACCCGGGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCACTCGAGGGTGAGCCCATGCTTACGCCGTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp TGTGTCACTGCCCTCCGACGGCGTAAGCATGGGCTCACCCTCGAGTaGAAGACCGTCGCCTGGACTGTTGCGGCTGCTGCCCGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: CVTALRRRKHGLTLE*KTVAWTVAAAARVA
Trigger: AGCTACCCGGGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCACTCGAGGGTGAGCCCATGCTTACGCCGTCGGAGGGCAGTGACACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GGGGTACACGACGGGATGCAACCCAGCCCCAGAGCCTCCTGCCTCCCGCGGGAAATGCCACTGCAGGCTTaGTCTTCTCTCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GVHDGMQPSPRASCLPREMPLQA*SSLWAS
Trigger: GCTGGCCCAGAGAGAAGACAAAGCCTGCAGTGGCAT...TTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTGCATCCCGTCGTGTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS GCA 90 bp GATCAGCTAGGGGTTCGGGCTCCACTGGGGCATCCTGGCCGACGCTaGTTGGCTGTGCACCCGACACTCCTACCTCCCTCCTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: DQLGVRAPLGHPGRR*LAVHPTLLPPSSGK
Trigger: CTTTCCAGAGGAGGGAGGTAGGAGTGTCGGGTGCACAGCCAAGCAGCGTCGGCCAGGATGCCCCAGTGGAGCCCGAACCCCTAGCTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS GCA 90 bp GCTCACCCTCGAGTGGAAGACCGTCGCCTGGACTGTTGCGGCTGCTaGCCGGGTAGCTGTCAGACGGGCTGTTGTGCAAACTGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: AHPRVEDRRLDCCGC*PGSCQTGCCANCRS
Trigger: AGAGCGGCAGTTTGCACAACAGCCCGTCTGACAGCTACCCGGGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCACTCGAGGGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 90 bp GACGGGATGCAACCCAGCCCCAGAGCCTCCTGCCTCCCGCGGGAATaGATTCAGCTCCACAGAGATGTGCTGGGCATGGGGGCTAAGAGC +
Preference number: 5 (lower is better)
Translates to: DGMQPSPRASCLPRE*IQLHRDVLGMGAKS
Trigger: GCTCTTAGCCCCCATGCCCAGCACATCTCTGTGGAGCTGAATGCATTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTGCATCCCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000178514.8
CDS CCA 90 bp GCTCAAGAGCAAGGTGATGGTGCCGTTTGGCAGAAGGCCGGGATCTaGAGGTTCGGGGAGATCCCCACCGCCGCACACCACCCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: AQEQGDGAVWQKAGI*RFGEIPTAAHHPPS
Trigger: CGAAGGAGGGTGGTGTGCGGCGGTGGGGATCTCCCCGAACCTCCAGATCCCGGCCTTCTGCCAAACGGCACCATCACCTTGCTCTTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GTAGACGGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCCGCTGCCCTTGAGGTaGTCACGGCTGGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: VDGLDRPRGFGSKQARVTPLPLR*SRLALR
Trigger: CCGCAGCGCCAGCCGTGACAACCTCAAGGGCAGCGG...GGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCCGTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCCGCGGGCGGCCACGCTaGCCTCGCACACCTGACTCT +
Preference number: 5 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPRGRPR*PRTPDS
Trigger: AGAGTCAGGTGTGCGAGGCAAGCGTGGCCGCCCGCG...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GTAGACGGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCGATTGGCGCGGCGCTaGTGTCACTGCCCTCCGACG +
Preference number: 5 (lower is better)
Translates to: VDGLDRPRGFGSKQARVTRLARR*CHCPPT
Trigger: CGTCGGAGGGCAGTGACACAAGCGCCGCGCCAATCG...GGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCCGTCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 90 bp AGGGCAGGCGGTCACCCTGGAACACCACTTGGCGAAGGGATGGGATaGGGTAGTGGGTGTGCAGTTCCAGGGCCCCTTCACAGCGAAGCT +
Preference number: 5 (lower is better)
Translates to: RAGGHPGTPLGEGMG*GSGCAVPGPLHSEA
Trigger: AGCTTCGCTGTGAAGGGGCCCTGGAACTGCACACCCACTACCTCATCCCATCCCTTCGCCAAGTGGTGTTCCAGGGTGACCGCCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 90 bp AGAGAAATGTTGGGCCTCCCAGTGGTGCAGCGGAACCTAAGCTGCTaGTCAGCTAGGGGTTCGGGCTCCACTGGGGCATCCTGGCCGACG +
Preference number: 5 (lower is better)
Translates to: REMLGLPVVQRNLSC*SARGSGSTGASWPT
Trigger: CGTCGGCCAGGATGCCCCAGTGGAGCCCGAACCCCTAGCTGATCAGCAGCTTAGGTTCCGCTGCACCACTGGGAGGCCCAACATTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS GCA 90 bp GGTTCGGGGCCACCTGAAGTCCCCACGGTTGTTGGTCACCCGCTCTaGAGGGCAGTAGGAGGCAGAGGTCTCCAGCACTACTATCTCCAC +
Preference number: 5 (lower is better)
Translates to: GSGPPEVPTVVGHPL*RAVGGRGLQHYYLH
Trigger: GTGGAGATAGTAGTGCTGGAGACCTCTGCCTCCTACTGCCCTGCAGAGCGGGTGACCAACAACCGTGGGGACTTCAGGTGGCCCCGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 90 bp AGCCACGGGCTCCGTCAAGTTTCCCACACCACAGCCACTGGTTCCTaGAAATATGACTGGGGTGGCCACACCACGCCTCTTGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SHGLRQVSHTTATGS*KYDWGGHTTPLARP
Trigger: GGGCCTGGCAAGAGGCGTGGTGTGGCCACCCCAGTCATATTTGCAGGAACCAGTGGCTGTGGTGTGGGAAACTTGACGGAGCCCGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS-3UTR CAA 90 bp TCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGCGCGGGCGGCCACGCTaGCCTCGCACACCTGACTCT +
Preference number: 5 (lower is better)
Translates to: SQRVWRLPCSVLSLDQSWRGRPR*PRTPDS
Trigger: AGAGTCAGGTGTGCGAGGCAAGCGTGGCCGCCCGCG...CCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTCCGCTGCCCTTGAGGTaGTCACGGCTGGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: PKPKLGERPGILAVTGYLPLPLR*SRLALR
Trigger: CCGCAGCGCCAGCCGTGACAACCTCAAGGGCAGCGG...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 90 bp AAATATGACTGGGGTGGCCACACCACGCCTCTTGCCAGGCCCAGCTaGTCCAGGACGGGAAGTGTTGTTGCCGTGGCTGCGGAAAAGACG +
Preference number: 5 (lower is better)
Translates to: KYDWGGHTTPLARPS*SRTGSVVAVAAEKT
Trigger: CGTCTTTTCCGCAGCCACGGCAACAACACTTCCCGTCCTGGAGCAGCTGGGCCTGGCAAGAGGCGTGGTGTGGCCACCCCAGTCATATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS CCA 90 bp CGTCAAGTTTCCCACACCACAGCCACTGGTTCCTGCAAATATGACTaGGGTGGCCACACCACGCCTCTTGCCAGGCCCAGCTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RQVSHTTATGSCKYD*GGHTTPLARPSCSR
Trigger: CCTGGAGCAGCTGGGCCTGGCAAGAGGCGTGGTGTGGCCACCCCAGTCATATTTGCAGGAACCAGTGGCTGTGGTGTGGGAAACTTGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS-3UTR CAA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGCCGCCACTTAGTCCCTaGGGCCGCTCCCCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQPPLSP*GRSPEH
Trigger: GTGCTCTGGGGAGCGGCCCAAGGGACTAAGTGGCGG...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCACCGCCACTTAGTCCCTaGGGCCGCTCCCCAGAGCAC +
Preference number: 5 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPPPLSP*GRSPEH
Trigger: GTGCTCTGGGGAGCGGCCCAAGGGACTAAGTGGCGG...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 90 bp ATTGTGGTACCAGTGGATCCGGGTATCGTTGCCCAAGTAGCTGGCTaGGCACTGGAAGGGCAGGCGGTCACCCTGGAACACCACTTGGCG +
Preference number: 5 (lower is better)
Translates to: IVVPVDPGIVAQVAG*ALEGQAVTLEHHLA
Trigger: CGCCAAGTGGTGTTCCAGGGTGACCGCCTGCCCTTCCAGTGCTCAGCCAGCTACTTGGGCAACGATACCCGGATCCACTGGTACCACAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp CTCTTGCCAGGCCCAGCTGCTCCAGGACGGGAAGTGTTGTTGCCGTaGCTGCGGAAAAGACGGCCATTTCTGAAGACCAGCAGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LLPGPAAPGREVLLP*LRKRRPFLKTSSCR
Trigger: CCTGCAACTGCTGGTCTTCAGAAATGGCCGTCTTTTCCGCAGCCACGGCAACAACACTTCCCGTCCTGGAGCAGCTGGGCCTGGCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CAA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTCTGAAGTCCCCACGGTaGTTGGTCACCCGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWALKSPR*LVTRSA
Trigger: TGCAGAGCGGGTGACCAACAACCGTGGGGACTTCAG...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp AGCGCCCCCAGCTGGACTCCAGGAGAATATACGCCATCACCATCCTCTGGGGGCATAAGCACGGCCACATaGCCCAAGTGCTGGCAGTAC +
Preference number: 5 (lower is better)
Translates to: SAPSWTPGEYTPSPSSGGISTAT*PKCWQY
Trigger: GTACTGCCAGCACTTGGGCAATGTGGCCGTGCTTAT...GCCCCCAGAGGATGGTGATGGCGTATATTCTCCTGGAGTCCAGCTGGGGGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS-3UTR CAA 90 bp TCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGCCGGCTCGGTGCCCCTaGGCCCGACTCTTGTGTACT +
Preference number: 5 (lower is better)
Translates to: SQRVWRLPCSVLSLDQSWPARCP*ARLLCT
Trigger: AGTACACAAGAGTCGGGCCAAGGGGCACCGAGCCGG...CCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CAGCCAGCGCTGAGACACCGCCAAGGCACCACAAGCCCACATAGCCAGGTACAGCAGGCGGAGCTGTGGTaGAGGATGTACGTGATGATG +
Preference number: 5 (lower is better)
Translates to: QPALRHRQGTTSPHSQVQQAELW*RMYVMM
Trigger: CATCATCACGTACATCCTCAACCACAGCTCCGCCTG...CTGTACCTGGCTATGTGGGCTTGTGGTGCCTTGGCGGTGTCTCAGCGCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS GCA 90 bp GGCGGCCTCTGCGGTATACACTCGCAGCTGGTGGGCCAACGTCAATaGATTGGAGGCGTTGATGGGCATCAGCACAAAGGTGTAGAGCAC +
Preference number: 5 (lower is better)
Translates to: GGLCGIHSQLVGQRQ*IGGVDGHQHKGVEH
Trigger: GTGCTCTACACCTTTGTGCTGATGCCCATCAACGCCTCCAATGCATTGACGTTGGCCCACCAGCTGCGAGTGTATACCGCAGAGGCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp CCCAGTAATCTTGTTGTTGCTCAAGAGCAAGGTGATGGTGCCGTTTaGCAGAAGGCCGGGATCTGGAGGTTCGGGGAGATCCCCACCGCC +
Preference number: 5 (lower is better)
Translates to: PSNLVVAQEQGDGAV*QKAGIWRFGEIPTA
Trigger: GGCGGTGGGGATCTCCCCGAACCTCCAGATCCCGGCCTTCTGCCAAACGGCACCATCACCTTGCTCTTGAGCAACAACAAGATTACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GTAGACGGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCACCCTGGAACACCACTaGGCGAAGGGATGGGATGAG +
Preference number: 5 (lower is better)
Translates to: VDGLDRPRGFGSKQARVTTLEHH*AKGWDE
Trigger: CTCATCCCATCCCTTCGCCAAGTGGTGTTCCAGGGT...GGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCCGTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp ACCTTGCCGGGCTGGTGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGCCAACGTCAATGCATaGGAGGCGTTGATGGGCATC +
Preference number: 5 (lower is better)
Translates to: TLPGWCGEPSSPVSLSFPANVNA*EALMGI
Trigger: GATGCCCATCAACGCCTCCAATGCATTGACGTTGGC...AGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACACCAGCCCGGCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTATGCCACTGCAGGCTTaGTCTTCTCTCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWAMPLQA*SSLWAS
Trigger: GCTGGCCCAGAGAGAAGACAAAGCCTGCAGTGGCAT...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGGAGGACTCGAGCCTaGACCCCCATCCAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPWRTRA*TPIQSS
Trigger: ACTGCTCTGGATGGGGGTCAAGGCTCGAGTCCTCCA...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp AGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGCTGTCAGACGGGCTGTaGTGCAAACTGCCGCTCTCA +
Preference number: 5 (lower is better)
Translates to: RHLLAVSLPRCVGVQGLLLSDGL*CKLPLS
Trigger: TGAGAGCGGCAGTTTGCACAACAGCCCGTCTGACAG...CAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAGCAGGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp ATGTCTGAGAAGCTGGCGGCCTCTGCGGTATACACTCGCAGCTGGTaGGCCAACGTCAATGCATTGGAGGCGTTGATGGGCATCAGCACA +
Preference number: 5 (lower is better)
Translates to: MSEKLAASAVYTRSW*ANVNALEALMGIST
Trigger: TGTGCTGATGCCCATCAACGCCTCCAATGCATTGACGTTGGCCCACCAGCTGCGAGTGTATACCGCAGAGGCCGCCAGCTTCTCAGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp ATCATGTCTGAGAAGCTGGCGGCCTCTGCGGTATACACTCGCAGCTaGTGGGCCAACGTCAATGCATTGGAGGCGTTGATGGGCATCAGC +
Preference number: 5 (lower is better)
Translates to: IMSEKLAASAVYTRS*WANVNALEALMGIS
Trigger: GCTGATGCCCATCAACGCCTCCAATGCATTGACGTTGGCCCACCAGCTGCGAGTGTATACCGCAGAGGCCGCCAGCTTCTCAGACATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp GGATCATCTGAGCCACATAGACCACGTCCATCATGTCTGAGAAGCTaGCGGCCTCTGCGGTATACACTCGCAGCTGGTGGGCCAACGTCA +
Preference number: 5 (lower is better)
Translates to: GSSEPHRPRPSCLRS*RPLRYTLAAGGPTS
Trigger: TGACGTTGGCCCACCAGCTGCGAGTGTATACCGCAGAGGCCGCCAGCTTCTCAGACATGATGGACGTGGTCTATGTGGCTCAGATGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp GCCTCCAGTGCCACATTTCTTGAATTCACAGAGATGTGCTGGGCATaGGGGCTAAGAGCAGCTCCTCCGATTCGCTCCAGGGCACCCACA +
Preference number: 5 (lower is better)
Translates to: ASSATFLEFTEMCWA*GLRAAPPIRSRAPT
Trigger: TGTGGGTGCCCTGGAGCGAATCGGAGGAGCTGCTCTTAGCCCCCATGCCCAGCACATCTCTGTGAATTCAAGAAATGTGGCACTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS-3UTR CAA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCACTGAAGTCCCCACGGTaGTTGGTCACCCGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPLKSPR*LVTRSA
Trigger: TGCAGAGCGGGTGACCAACAACCGTGGGGACTTCAG...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCATGCCACTGCAGGCTTaGTCTTCTCTCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPMPLQA*SSLWAS
Trigger: GCTGGCCCAGAGAGAAGACAAAGCCTGCAGTGGCAT...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GTAGACGGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCTCCAACTAAGCTCCTaGTGGAGGACTCGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: VDGLDRPRGFGSKQARVTLQLSS*WRTRAL
Trigger: CAAGGCTCGAGTCCTCCACAAGGAGCTTAGTTGGAG...GGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCCGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp AGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACTGCTGAGGGATCCGGCTCGGTGCCCCTaGGCCCGACTCTTGTGTACT +
Preference number: 5 (lower is better)
Translates to: RTWPPKLVWDCLSLLLRDPARCP*ARLLCT
Trigger: AGTACACAAGAGTCGGGCCAAGGGGCACCGAGCCGG...ATCCCTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 90 bp AAGCTCCTTGTGGAGGACTCGAGCCTTGACCCCCATCCAGAGCAGTaGCGACAAGGAAGAGTAGTGCAGAGTGATGCCCACCGCTTGACA +
Preference number: 5 (lower is better)
Translates to: KLLVEDSSLDPHPEQ*RQGRVVQSDAHRLT
Trigger: TGTCAAGCGGTGGGCATCACTCTGCACTACTCTTCCTTGTCGTCACTGCTCTGGATGGGGGTCAAGGCTCGAGTCCTCCACAAGGAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 90 bp GCTCCAGGACGGGAAGTGTTGTTGCCGTGGCTTGATGTGGAAGGATaGCAGAGAAATGTTGGGCCTCCCAGTGGTGCAGCGGAACCTAAG +
Preference number: 5 (lower is better)
Translates to: APGREVLLPWLDVEG*QRNVGPPSGAAEPK
Trigger: CTTAGGTTCCGCTGCACCACTGGGAGGCCCAACATTTCTCTGTCATCCTTCCACATCAAGCCACGGCAACAACACTTCCCGTCCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS GCA 90 bp GGCAGTAGGAGGCAGAGGTCTCCAGCACTACTATCTCCACCTTCTTaGTGGTGTTGCCTTGGACTGTGGACACGGAGCACTCCCATTCAC +
Preference number: 5 (lower is better)
Translates to: GSRRQRSPALLSPPS*WCCLGLWTRSTPIH
Trigger: GTGAATGGGAGTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAGTAGTGCTGGAGACCTCTGCCTCCTACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp TGGTCTCGCTTTTCCAGAGGCCAGTCTTCATGGAGCCTCCCGCTATaGCCTCTGCACCAGTTACACTGGCATCCTCATACTTGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: WSRFSRGQSSWSLPL*PLHQLHWHPHTCPL
Trigger: AAGGGGGCAAGTATGAGGATGCCAGTGTAACTGGTGCAGAGGCCATAGCGGGAGGCTCCATGAAGACTGGCCTCTGGAAAAGCGAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCGCCCAAGCCCAGTAATCTTGTaGTTGCTCAAGAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: GLDRPRGFGSKQARVTRPSPVIL*LLKSKV
Trigger: CACCTTGCTCTTGAGCAACAACAAGATTACTGGGCT...TGGGCGGGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCACTTGCTGGTGTTGCCTaGGACTGTGGACACGGAGCA +
Preference number: 5 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPLAGVA*DCGHGA
Trigger: TGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAG...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTACCCGAGTGATGTCATaGGTGTACAGACAGTGCGAG +
Preference number: 5 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWATRVMS*VYRQCE
Trigger: CTCGCACTGTCTGTACACCAATGACATCACTCGGGT...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTGGACGGGAAGTGTTGTaGCCGTGGCTGCGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: PKPKLGERPGILAVTGYLGREVL*PWLRKR
Trigger: TCTTTTCCGCAGCCACGGCAACAACACTTCCCGTCC...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CAA 90 bp TTATTAGCATGGGTGATGATGGTGGAGAAGAGACAGAGTAGCAGCAAAGCCGTGGCCACACCACGCCTCTaGCCAGGCCCAGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: LLAWVMMVEKRQSSSKAVATPRL*PGPAAP
Trigger: TGGAGCAGCTGGGCCTGGCAAGAGGCGTGGTGTGGC...CACGGCTTTGCTGCTACTCTGTCTCTTCTCCACCATCATCACCCATGCTAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR CAA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCACTGTCAGACGGGCTGTaGTGCAAACTGCCGCTCTCA +
Preference number: 5 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPLSDGL*CKLPLS
Trigger: TGAGAGCGGCAGTTTGCACAACAGCCCGTCTGACAG...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTCATACTTGCCCCCTTaGGGGGCACCGTTAAGACTG +
Preference number: 5 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPSYLPP*GAPLRL
Trigger: CAGTCTTAACGGTGCCCCCAAAGGGGGCAAGTATGA...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 90 bp AAACTTCTGGATCATCTGAGCCACATAGACCACGTCCATCATGTCTaGGAAGCTGGCGGCCTCTGCGGTATACACTCGCAGCTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: KLLDHLSHIDHVHHV*EAGGLCGIHSQLVG
Trigger: GCCCACCAGCTGCGAGTGTATACCGCAGAGGCCGCCAGCTTCTCAGACATGATGGACGTGGTCTATGTGGCTCAGATGATCCAGAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp CCAGCACTACTATCTCCACCTTCTTGCTGGTGTTGCCTTGGACTGTaGACACGGAGCACTCCCATTCACCAGAGGCCCACACACCAATGT +
Preference number: 5 (lower is better)
Translates to: PALLSPPSCWCCLGL*TRSTPIHQRPTHQC
Trigger: ACATTGGTGTGTGGGCCTCTGGTGAATGGGAGTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAGTAGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp AGTAGGAGGCAGAGGTCTCCAGCACTACTATCTCCACCTTCTTGCTaGTGTTGCCTTGGACTGTGGACACGGAGCACTCCCATTCACCAG +
Preference number: 5 (lower is better)
Translates to: SRRQRSPALLSPPSC*CCLGLWTRSTPIHQ
Trigger: CTGGTGAATGGGAGTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAGTAGTGCTGGAGACCTCTGCCTCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 90 bp GATAGGCAGAATCAACGCCACCGGTATGTAGAAGGCACCAAGGCTTaGACGCCACACCAGCCAACAATAGGGACTGTGGTCCCGGTAGTT +
Preference number: 5 (lower is better)
Translates to: DRQNQRHRYVEGTKA*TPHQPTIGTVVPVV
Trigger: AACTACCGGGACCACAGTCCCTATTGTTGGCTGGTGTGGCGTCCAAGCCTTGGTGCCTTCTACATACCGGTGGCGTTGATTCTGCCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
ENSMUST00000179351.2
CDS CCA 90 bp CAATCAAGTAGAACCGGAGCATGGGGCGAGGACCAGGCGGAGCTGTaGTTGAGGATGTACGTGATGATGGTGGAGAAGAGACAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: QSSRTGAWGEDQAEL*LRMYVMMVEKRQSS
Trigger: GCTACTCTGTCTCTTCTCCACCATCATCACGTACATCCTCAACCACAGCTCCGCCTGGTCCTCGCCCCATGCTCCGGTTCTACTTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS-3UTR CAA 90 bp GGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCGCCCACAGCCAATCCGATTGTaGGAGAGATCTAAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: GLDRPRGFGSKQARVTRPQPIRL*ERSKRF
Trigger: AAAACGCTTAGATCTCTCCAACAATCGGATTGGCTG...TGGGCGGGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GGCTTGGACCGCCCAAGAGGATTTGGGAGTAAACAAGCCCGCGTGACCCGCCCAATCAAAGACCCCAGGTaGCAGACTAGAGTAGATGTT +
Preference number: 5 (lower is better)
Translates to: GLDRPRGFGSKQARVTRPIKDPR*QTRVDV
Trigger: AACATCTACTCTAGTCTGCAACCTGGGGTCTTTGAT...TGGGCGGGTCACGCGGGCTTGTTTACTCCCAAATCCTCTTGGGCGGTCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTACCCTGGAACACCACTaGGCGAAGGGATGGGATGAG +
Preference number: 5 (lower is better)
Translates to: IMGPISASMASSLLCPLTTLEHH*AKGWDE
Trigger: CTCATCCCATCCCTTCGCCAAGTGGTGTTCCAGGGT...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGACCTTCTTGCTGGTGTaGCCTTGGACTGTGGACACG +
Preference number: 5 (lower is better)
Translates to: SQRVWRLPCSVLSLDQSWTFLLV*PWTVDT
Trigger: CGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGT...CCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TGTGGAGAACCCAGTTCCCCGGTCTCCCTCTCATTTCCTGAGCCTACCTGGGCTACTATCTCCACCTTCTaGCTGGTGTTGCCTTGGACT +
Preference number: 5 (lower is better)
Translates to: CGEPSSPVSLSFPEPTWATISTF*LVLPWT
Trigger: AGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAGT...AGCCCAGGTAGGCTCAGGAAATGAGAGGGAGACCGGGGAACTGGGTTCTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGCCAACGTCAATGCATaGGAGGCGTTGATGGGCATC +
Preference number: 5 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQANVNA*EALMGI
Trigger: GATGCCCATCAACGCCTCCAATGCATTGACGTTGGC...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGACTCCAACTAAGCTCCTaGTGGAGGACTCGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: WFPKPKLGERPGILAVTGLQLSS*WRTRAL
Trigger: CAAGGCTCGAGTCCTCCACAAGGAGCTTAGTTGGAG...TCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 90 bp GTGGACACGGAGCACTCCCATTCACCAGAGGCCCACACACCAATGTaGGACAGGGTCAGCTCACTGGTGATGAAGGTGCAATCATGGATA +
Preference number: 5 (lower is better)
Translates to: VDTEHSHSPEAHTPM*DRVSSLVMKVQSWI
Trigger: TATCCATGATTGCACCTTCATCACCAGTGAGCTGACCCTGTCTCACATTGGTGTGTGGGCCTCTGGTGAATGGGAGTGCTCCGTGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 90 bp ACAGCAGAGGTCATGGCCATATGGAAACAAAGGTTCAGCAGCATGTaGCAACCCTTCCGGGACACGTGGATGGAGCTGTGGTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: TAEVMAIWKQRFSSM*QPFRDTWMELWLRM
Trigger: CATCCTCAACCACAGCTCCATCCACGTGTCCCGGAAGGGTTGGCACATGCTGCTGAACCTTTGTTTCCATATGGCCATGACCTCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 90 bp ATATACGCCATCACCATCCTCTGGGGGCGCAGGTGTCCCTACTCCTaGGCTAACTGTAGCCAAAAGAGAACCAGAGTCATTCAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: IYAITILWGRRCPYS*ANCSQKRTRVIQED
Trigger: GTCCTCCTGAATGACTCTGGTTCTCTTTTGGCTACAGTTAGCGCAGGAGTAGGGACACCTGCGCCCCCAGAGGATGGTGATGGCGTATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp AGGCACCTGCTGGCAGTATCACTTCCCAGGTGTGTGGGGGTTCAGGGTTTGCTGAGCCCAGTAATCTTGTaGTTGCTCAAGAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: RHLLAVSLPRCVGVQGLLSPVIL*LLKSKV
Trigger: CACCTTGCTCTTGAGCAACAACAAGATTACTGGGCT...CAGCAAACCCTGAACCCCCACACACCTGGGAAGTGATACTGCCAGCAGGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTATCCACCAGCATCAGGTaGCTGGCCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLSTSIR*LAMSTI
Trigger: GATGGTGGACATGGCCAGCAACCTGATGCTGGTGGA...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGGATGGAGCTGTGGTaGAGGATGTACGTGATGATG +
Preference number: 5 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPWMELW*RMYVMM
Trigger: CATCATCACGTACATCCTCAACCACAGCTCCATCCA...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 90 bp AAGGTGCAATCATGGATAAGGTTTTCAGCAAGGACGATGCCGGCCTaGTCATCGCTCTCCATAGGAGCCCCATTGTGGTACCAGTGGATC +
Preference number: 5 (lower is better)
Translates to: KVQSWIRFSARTMPA*SSLSIGAPLWYQWI
Trigger: GATCCACTGGTACCACAATGGGGCTCCTATGGAGAGCGATGAGCAGGCCGGCATCGTCCTTGCTGAAAACCTTATCCATGATTGCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGACGGAGCCCAGTAATCTaGTTGTTGCTCAAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: WFPKPKLGERPGILAVTGRSPVI*LLLKSK
Trigger: CTTGCTCTTGAGCAACAACAAGATTACTGGGCTCCG...TCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GATGGTTTCCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGAATGCATTGGAGGCGTaGATGGGCATCAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: DGFPSQNWERGLGSWQSQNALEA*MGISTK
Trigger: CTTTGTGCTGATGCCCATCAACGCCTCCAATGCATT...CTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGGAAACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGCCACACCACGCCTCTaGCCAGGCCCAGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSATPRL*PGPAAP
Trigger: TGGAGCAGCTGGGCCTGGCAAGAGGCGTGGTGTGGC...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CAA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGATAAGCACGGCCACATaGCCCAAGTGCTGGCAGTAC +
Preference number: 5 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKISTAT*PKCWQY
Trigger: GTACTGCCAGCACTTGGGCAATGTGGCCGTGCTTAT...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CAA 90 bp CTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCTGCTACTTCCCACGCTTGACAAACCATTaGGTAGTTGGTGAGCGTGAC +
Preference number: 5 (lower is better)
Translates to: LPCSVLSLDQSWDPCYFPRLTNH*VVGERD
Trigger: GTCACGCTCACCAACTACCAAATGGTTTGTCAAGCG...TGGGAAGTAGCAGGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATCGATTGGCGCGGCGCTaGTGTCACTGCCCTCCGACG +
Preference number: 5 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYRLARR*CHCPPT
Trigger: CGTCGGAGGGCAGTGACACAAGCGCCGCGCCAATCG...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCCAGCCAATCCGATTGTaGGAGAGATCTAAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPQPIRL*ERSKRF
Trigger: AAAACGCTTAGATCTCTCCAACAATCGGATTGGCTG...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CCCAAGCCAAAACTGGGAGAGAGGCCTGGGATCTTGGCAGTCACAGGATACCTTAGACAGCCAATCCGATaGTTGGAGAGATCTAAGCGT +
Preference number: 5 (lower is better)
Translates to: PKPKLGERPGILAVTGYLRQPIR*LERSKR
Trigger: ACGCTTAGATCTCTCCAACAATCGGATTGGCTGTCT...AAGGTATCCTGTGACTGCCAAGATCCCAGGCCTCTCTCCCAGTTTTGGCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTAAGTCTAGGGAGCCCTaGAAATGTCTCAGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: IMGPISASMASSLLCPLTKSREP*KCLRGE
Trigger: CTCACCTCTGAGACATTTCAAGGGCTCCCTAGACTT...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp ATAATGGGACCCATCTCAGCGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTAATGCATTGGAGGCGTaGATGGGCATCAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: IMGPISASMASSLLCPLTNALEA*MGISTK
Trigger: CTTTGTGCTGATGCCCATCAACGCCTCCAATGCATT...AGTGAGAGGACAGAGCAGGGAAGACGCCATACTCGCTGAGATGGGTCCCATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TTATTAGCATGGGTGATGATGGTGGAGAAGAGACAGAGTAGCAGCAAAGCCGTGTCCACCAGCATCAGGTaGCTGGCCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: LLAWVMMVEKRQSSSKAVSTSIR*LAMSTI
Trigger: GATGGTGGACATGGCCAGCAACCTGATGCTGGTGGA...CACGGCTTTGCTGCTACTCTGTCTCTTCTCCACCATCATCACCCATGCTAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR CAA 90 bp CGAGTATGGCGTCTTCCCTGCTCTGTCCTCTCACTTGATCAGAGCTGGGATCCCCCAGTGCCACATTTCTaGAATTCACAGAGATGTGCT +
Preference number: 5 (lower is better)
Translates to: RVWRLPCSVLSLDQSWDPPVPHF*NSQRCA
Trigger: AGCACATCTCTGTGAATTCAAGAAATGTGGCACTGG...GGGATCCCAGCTCTGATCAAGTGAGAGGACAGAGCAGGGAAGACGCCATACTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS-3UTR CAA 90 bp CTCAGTCCCCCGGAGTTGGAGGGCTGGGAACAGACAGTGGGTATTATAATTAAGACAGTGCTGATGACATaGCTCCTCAGGTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: LSPPELEGWEQTVGIIIKTVLMT*LLRSNF
Trigger: GAAGTTGGACCTGAGGAGCAATGTCATCAGCACTGT...CTTAATTATAATACCCACTGTCTGTTCCCAGCCCTCCAACTCCGGGGGACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp AGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACTGCTGAGGGATTGGATGGAGCTGTGGTaGAGGATGTACGTGATGATG +
Preference number: 5 (lower is better)
Translates to: RTWPPKLVWDCLSLLLRDWMELW*RMYVMM
Trigger: CATCATCACGTACATCCTCAACCACAGCTCCATCCA...ATCCCTCAGCAGTAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp GGCAGGATACCAAGAACTTGGCCACCAAAACTGGTCTGGGATTGTCTGTCGCTACGCTTGACAAACCATTaGGTAGTTGGTGAGCGTGAC +
Preference number: 5 (lower is better)
Translates to: GRIPRTWPPKLVWDCLSLRLTNH*VVGERD
Trigger: GTCACGCTCACCAACTACCAAATGGTTTGTCAAGCG...TAGCGACAGACAATCCCAGACCAGTTTTGGTGGCCAAGTTCTTGGTATCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGACCTTCTTGCTGGTGTaGCCTTGGACTGTGGACACG +
Preference number: 5 (lower is better)
Translates to: PLIVSVQQSINNGTHLSETFLLV*PWTVDT
Trigger: CGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGT...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp AATGCATTCAGCTCCATAAGCACGGCCACATTGCCCAAGTGCTGGCAGTACAGGCCAGTGCCACATTTCTaGAATTCACAGAGATGTGCT +
Preference number: 5 (lower is better)
Translates to: NAFSSISTATLPKCWQYRPVPHF*NSQRCA
Trigger: AGCACATCTCTGTGAATTCAAGAAATGTGGCACTGG...CCTGTACTGCCAGCACTTGGGCAATGTGGCCGTGCTTATGGAGCTGAATGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS-3UTR CAA 90 bp TCACGTGGGAGAGTAATACAAAGCTTTTCCTCTAATAGTGTCTGTGCAGCAAAGTGGAGGACTCGAGCCTaGACCCCCATCCAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: SRGRVIQSFSSNSVCAAKWRTRA*TPIQSS
Trigger: ACTGCTCTGGATGGGGGTCAAGGCTCGAGTCCTCCA...CTTTGCTGCACAGACACTATTAGAGGAAAAGCTTTGTATTACTCTCCCACGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCCTTGCTGGTGTTGCCTaGGACTGTGGACACGGAGCA +
Preference number: 5 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSLAGVA*DCGHGA
Trigger: TGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAG...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCTCCACCAGCATCAGGTaGCTGGCCATGTCCACCATC +
Preference number: 5 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSSTSIR*LAMSTI
Trigger: GATGGTGGACATGGCCAGCAACCTGATGCTGGTGGA...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGACTATCTCCACCTTCTaGCTGGTGTTGCCTTGGACT +
Preference number: 5 (lower is better)
Translates to: PLIVSVQQSINNGTHLSETISTF*LVLPWT
Trigger: AGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAGT...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCTCATACTTGCCCCCTTaGGGGGCACCGTTAAGACTG +
Preference number: 5 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSSYLPP*GAPLRL
Trigger: CAGTCTTAACGGTGCCCCCAAAGGGGGCAAGTATGA...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGAGACAGCCAATCCGATaGTTGGAGAGATCTAAGCGT +
Preference number: 5 (lower is better)
Translates to: PLIVSVQQSINNGTHLSERQPIR*LERSKR
Trigger: ACGCTTAGATCTCTCCAACAATCGGATTGGCTGTCT...CTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCACCCGAGTGATGTCATaGGTGTACAGACAGTGCGAG +
Preference number: 5 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSTRVMS*VYRQCE
Trigger: CTCGCACTGTCTGTACACCAATGACATCACTCGGGT...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCACAGTGCTGATGACATaGCTCCTCAGGTCCAACTTC +
Preference number: 5 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSTVLMT*LLRSNF
Trigger: GAAGTTGGACCTGAGGAGCAATGTCATCAGCACTGT...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp TTTCCTCTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCAAGTCTAGGGAGCCCTaGAAATGTCTCAGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: FPLIVSVQQSINNGTHLSKSREP*KCLRGE
Trigger: CTCACCTCTGAGACATTTCAAGGGCTCCCTAGACTT...GCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAGAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS-3UTR CAA 90 bp CTAATAGTGTCTGTGCAGCAAAGCATAAATAATGGGACCCATCTCAGCGAGTATATCAAAGACCCCAGGTaGCAGACTAGAGTAGATGTT +
Preference number: 5 (lower is better)
Translates to: LIVSVQQSINNGTHLSEYIKDPR*QTRVDV
Trigger: AACATCTACTCTAGTCTGCAACCTGGGGTCTTTGAT...ATACTCGCTGAGATGGGTCCCATTATTTATGCTTTGCTGCACAGACACTATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp CGCTGCGGCGCTGCCCGGGGCGCCCCGTCTCAGCGATaGGCGCGGCGCTTGTGTCACTGCCCTCCGACGGCG +
Preference number: 6 (lower is better)
Translates to: RCGAARGAPSQR*ARRLCHCPPTA
Trigger: CGCCGTCGGAGGGCAGTGACACAAGCGCCGCGCCAATCGCTGAGACGGGGCGCCCCGGGCAGCGCCGCAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 90 bp CGGCGCTTGCTCTCCCTCTCCAGCGCGCTGCCGCTGCCCTTGAGGTaGTCACGGCTGGCGCTGCGGCGCTGCCCGGGGCGCCCCGTCTCA +
Preference number: 6 (lower is better)
Translates to: RRLLSLSSALPLPLR*SRLALRRCPGRPVS
Trigger: TGAGACGGGGCGCCCCGGGCAGCGCCGCAGCGCCAGCCGTGACAACCTCAAGGGCAGCGGCAGCGCGCTGGAGAGGGAGAGCAAGCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp GCTGCGGCGCTGCCCGGGGCGCCCCGTCTCAGCGATTaGCGCGGCGCTTGTGTCACTGCCCTCCGACGGCGT +
Preference number: 6 (lower is better)
Translates to: AAALPGAPRLSD*RGACVTALRRR
Trigger: ACGCCGTCGGAGGGCAGTGACACAAGCGCCGCGCCAATCGCTGAGACGGGGCGCCCCGGGCAGCGCCGCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 72 bp GCTTGCTCTCCCTCTCCAGCGCGCTGCCGCTGCCCTTaGGGTTGTCACGGCTGGCGCTGCGGCGCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: ACSPSPARCRCP*GCHGWRCGAAR
Trigger: CCGGGCAGCGCCGCAGCGCCAGCCGTGACAACCTCAAGGGCAGCGGCAGCGCGCTGGAGAGGGAGAGCAAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp CGCTTGCTCTCCCTCTCCAGCGCGCTGCCGCTGCCCTaGAGGTTGTCACGGCTGGCGCTGCGGCGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: RLLSLSSALPLP*RLSRLALRRCP
Trigger: CGGGCAGCGCCGCAGCGCCAGCCGTGACAACCTCAAGGGCAGCGGCAGCGCGCTGGAGAGGGAGAGCAAGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp CCACCGCCGCACACCACCCTCCTTCGAGCCGGGTTGTaGGCGCCGCCACTTAGTCCCTTGGGCCGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: PPPHTTLLRAGL*APPLSPLGRSP
Trigger: TGGGGAGCGGCCCAAGGGACTAAGTGGCGGCGCCCACAACCCGGCTCGAAGGAGGGTGGTGTGCGGCGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 90 bp TTGTGGGCGCCGCCACTTAGTCCCTTGGGCCGCTCCCCAGAGCACTaGCAACCGCGGATAGGGACCGGGCAGCCAGGCGCACCCCGAGTT +
Preference number: 6 (lower is better)
Translates to: LWAPPLSPLGRSPEH*QPRIGTGQPGAPRV
Trigger: AACTCGGGGTGCGCCTGGCTGCCCGGTCCCTATCCGCGGTTGCAAGTGCTCTGGGGAGCGGCCCAAGGGACTAAGTGGCGGCGCCCACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 90 bp ACCACCCTCCTTCGAGCCGGGTTGTGGGCGCCGCCACTTAGTCCCTaGGGCCGCTCCCCAGAGCACTTGCAACCGCGGATAGGGACCGGG +
Preference number: 6 (lower is better)
Translates to: TTLLRAGLWAPPLSP*GRSPEHLQPRIGTG
Trigger: CCCGGTCCCTATCCGCGGTTGCAAGTGCTCTGGGGAGCGGCCCAAGGGACTAAGTGGCGGCGCCCACAACCCGGCTCGAAGGAGGGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp ACTGCCGCTCTCACTGGACAACAGCTCGGGAGCTCCTaGGGACGTGCCCGCGCGCAACGCCTTGAGCCGGCT +
Preference number: 6 (lower is better)
Translates to: TAALTGQQLGSS*GRARAQRLEPA
Trigger: AGCCGGCTCAAGGCGTTGCGCGCGGGCACGTCCCCAGGAGCTCCCGAGCTGTTGTCCAGTGAGAGCGGCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp CCGCCACTTAGTCCCTTGGGCCGCTCCCCAGAGCACTaGCAACCGCGGATAGGGACCGGGCAGCCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: PPLSPLGRSPEH*QPRIGTGQPGA
Trigger: TGCGCCTGGCTGCCCGGTCCCTATCCGCGGTTGCAAGTGCTCTGGGGAGCGGCCCAAGGGACTAAGTGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp TGGGGTGGCCACACCACGCCTCTTGCCAGGCCCAGCTaGTCCAGGACGGGAAGTGTTGTTGCCGTGGCTGCG +
Preference number: 6 (lower is better)
Translates to: WGGHTTPLARPS*SRTGSVVAVAA
Trigger: CGCAGCCACGGCAACAACACTTCCCGTCCTGGAGCAGCTGGGCCTGGCAAGAGGCGTGGTGTGGCCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS CCA 72 bp GCCCTCCGACGGCGTAAGCATGGGCTCACCCTCGAGTaGAAGACCGTCGCCTGGACTGTTGCGGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: ALRRRKHGLTLE*KTVAWTVAAAA
Trigger: GGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCACTCGAGGGTGAGCCCATGCTTACGCCGTCGGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 90 bp CAGCTAGGGGTTCGGGCTCCACTGGGGCATCCTGGCCGACGCTGCTaGGCTGTGCACCCGACACTCCTACCTCCCTCCTCTGGAAAGCCG +
Preference number: 6 (lower is better)
Translates to: QLGVRAPLGHPGRRC*AVHPTLLPPSSGKP
Trigger: CGGCTTTCCAGAGGAGGGAGGTAGGAGTGTCGGGTGCACAGCCAAGCAGCGTCGGCCAGGATGCCCCAGTGGAGCCCGAACCCCTAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS GCA 72 bp GCTCACCCTCGAGTGGAAGACCGTCGCCTGGACTGTTaGGGCTGCTGCCCGGGTAGCTGTCAGACGGGCTGT +
Preference number: 6 (lower is better)
Translates to: AHPRVEDRRLDC*GCCPGSCQTGC
Trigger: ACAGCCCGTCTGACAGCTACCCGGGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCACTCGAGGGTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp TTCGGGCTCCACTGGGGCATCCTGGCCGACGCTGCTTaGCTGTGCACCCGACACTCCTACCTCCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: FGLHWGILADAA*LCTRHSYLPPL
Trigger: CAGAGGAGGGAGGTAGGAGTGTCGGGTGCACAGCCAAGCAGCGTCGGCCAGGATGCCCCAGTGGAGCCCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS CAA 72 bp CTTCGAGCCGGGTTGTGGGCGCCGCCACTTAGTCCCTaGGGCCGCTCCCCAGAGCACTTGCAACCGCGGATA +
Preference number: 6 (lower is better)
Translates to: LRAGLWAPPLSP*GRSPEHLQPRI
Trigger: TATCCGCGGTTGCAAGTGCTCTGGGGAGCGGCCCAAGGGACTAAGTGGCGGCGCCCACAACCCGGCTCGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp GTTCGGGCTCCACTGGGGCATCCTGGCCGACGCTGCTaGGCTGTGCACCCGACACTCCTACCTCCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: VRAPLGHPGRRC*AVHPTLLPPSS
Trigger: AGAGGAGGGAGGTAGGAGTGTCGGGTGCACAGCCAAGCAGCGTCGGCCAGGATGCCCCAGTGGAGCCCGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS GCA 72 bp CTCCACTGGGGCATCCTGGCCGACGCTGCTTGGCTGTaGACCCGACACTCCTACCTCCCTCCTCTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: LHWGILADAAWL*TRHSYLPPLES
Trigger: GCTTTCCAGAGGAGGGAGGTAGGAGTGTCGGGTGCACAGCCAAGCAGCGTCGGCCAGGATGCCCCAGTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS GCA 72 bp CCTCGAGTGGAAGACCGTCGCCTGGACTGTTGCGGCTaGTGCCCGGGTAGCTGTCAGACGGGCTGTTGTGCA +
Preference number: 6 (lower is better)
Translates to: PRVEDRRLDCCG*CPGSCQTGCCA
Trigger: TGCACAACAGCCCGTCTGACAGCTACCCGGGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCACTCGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp CAACCCAGCCCCAGAGCCTCCTGCCTCCCGCGGGAATaGATTCAGCTCCACAGAGATGTGCTGGGCATGGGG +
Preference number: 6 (lower is better)
Translates to: QPSPRASCLPRE*IQLHRDVLGMG
Trigger: CCCCATGCCCAGCACATCTCTGTGGAGCTGAATGCATTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178514.8
CDS CCA 72 bp CAAGGTGATGGTGCCGTTTGGCAGAAGGCCGGGATCTaGAGGTTCGGGGAGATCCCCACCGCCGCACACCAC +
Preference number: 6 (lower is better)
Translates to: QGDGAVWQKAGI*RFGEIPTAAHH
Trigger: GTGGTGTGCGGCGGTGGGGATCTCCCCGAACCTCCAGATCCCGGCCTTCTGCCAAACGGCACCATCACCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 72 bp TTGGGCCTCCCAGTGGTGCAGCGGAACCTAAGCTGCTaGTCAGCTAGGGGTTCGGGCTCCACTGGGGCATCC +
Preference number: 6 (lower is better)
Translates to: LGLPVVQRNLSC*SARGSGSTGAS
Trigger: GGATGCCCCAGTGGAGCCCGAACCCCTAGCTGATCAGCAGCTTAGGTTCCGCTGCACCACTGGGAGGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS GCA 72 bp CGAGTGGAAGACCGTCGCCTGGACTGTTGCGGCTGCTaGCCGGGTAGCTGTCAGACGGGCTGTTGTGCAAAC +
Preference number: 6 (lower is better)
Translates to: RVEDRRLDCCGC*PGSCQTGCCAN
Trigger: GTTTGCACAACAGCCCGTCTGACAGCTACCCGGGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCACTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp AAGCATGGGCTCACCCTCGAGTGGAAGACCGTCGCCTaGACTGTTGCGGCTGCTGCCCGGGTAGCTGTCAGA +
Preference number: 6 (lower is better)
Translates to: KHGLTLEWKTVA*TVAAAARVAVR
Trigger: TCTGACAGCTACCCGGGCAGCAGCCGCAACAGTCCAGGCGACGGTCTTCCACTCGAGGGTGAGCCCATGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp CCACCTGAAGTCCCCACGGTTGTTGGTCACCCGCTCTaGAGGGCAGTAGGAGGCAGAGGTCTCCAGCACTAC +
Preference number: 6 (lower is better)
Translates to: PPEVPTVVGHPL*RAVGGRGLQHY
Trigger: GTAGTGCTGGAGACCTCTGCCTCCTACTGCCCTGCAGAGCGGGTGACCAACAACCGTGGGGACTTCAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp TGCCCGGGTAGCTGTCAGACGGGCTGTTGTGCAAACTaGCGCTCTCACTGGACAACAGCTCGGGAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: CPGSCQTGCCAN*RSHWTTARELL
Trigger: CAGGAGCTCCCGAGCTGTTGTCCAGTGAGAGCGGCAGTTTGCACAACAGCCCGTCTGACAGCTACCCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp GTACACGACGGGATGCAACCCAGCCCCAGAGCCTCCTaGCTCCCGCGGGAATGCATTCAGCTCCACAGAGAT +
Preference number: 6 (lower is better)
Translates to: VHDGMQPSPRAS*LPRECIQLHRD
Trigger: ATCTCTGTGGAGCTGAATGCATTCCCGCGGGAGGCAGGAGGCTCTGGGGCTGGGTTGCATCCCGTCGTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000178514.8
CDS CCA 72 bp TCCCACACCACAGCCACTGGTTCCTGCAAATATGACTaGGGTGGCCACACCACGCCTCTTGCCAGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SHTTATGSCKYD*GGHTTPLARPS
Trigger: GCTGGGCCTGGCAAGAGGCGTGGTGTGGCCACCCCAGTCATATTTGCAGGAACCAGTGGCTGTGGTGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS CAA 72 bp GCACTGGAAGGGCAGGCGGTCACCCTGGAACACCACTaGGCGAAGGGATGGGATGAGGTAGTGGGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: ALEGQAVTLEHH*AKGWDEVVGVQ
Trigger: CTGCACACCCACTACCTCATCCCATCCCTTCGCCAAGTGGTGTTCCAGGGTGACCGCCTGCCCTTCCAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 72 bp GGTCACCCTGGAACACCACTTGGCGAAGGGATGGGATaGGGTAGTGGGTGTGCAGTTCCAGGGCCCCTTCAC +
Preference number: 6 (lower is better)
Translates to: GHPGTPLGEGMG*GSGCAVPGPLH
Trigger: GTGAAGGGGCCCTGGAACTGCACACCCACTACCTCATCCCATCCCTTCGCCAAGTGGTGTTCCAGGGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp AAGCTGGCGGCCTCTGCGGTATACACTCGCAGCTGGTaGGCCAACGTCAATGCATTGGAGGCGTTGATGGGC +
Preference number: 6 (lower is better)
Translates to: KLAASAVYTRSW*ANVNALEALMG
Trigger: GCCCATCAACGCCTCCAATGCATTGACGTTGGCCCACCAGCTGCGAGTGTATACCGCAGAGGCCGCCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp TCCCGCGGGAATGCATTCAGCTCCACAGAGATGTGCTaGGCATGGGGGCTAAGAGCAGCTCCTCCGATTCGC +
Preference number: 6 (lower is better)
Translates to: SRGNAFSSTEMC*AWGLRAAPPIR
Trigger: GCGAATCGGAGGAGCTGCTCTTAGCCCCCATGCCCAGCACATCTCTGTGGAGCTGAATGCATTCCCGCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000178514.8
CDS TCA 72 bp GAGAACCAGAGTCATTCAGGAGGACGCCACTACTCCTaGGCCTGGTGGAACCCCTCAGCTCTTCCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: ENQSHSGGRHYS*AWWNPSALPLA
Trigger: AGCCAGGGGAAGAGCTGAGGGGTTCCACCAGGCTCAGGAGTAGTGGCGTCCTCCTGAATGACTCTGGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp GAGGCCAGTCTTCATGGAGCCTCCCGCTATGGCCTCTaGACCAGTTACACTGGCATCCTCATACTTGCCCCC +
Preference number: 6 (lower is better)
Translates to: EASLHGASRYGL*TSYTGILILAP
Trigger: GGGGGCAAGTATGAGGATGCCAGTGTAACTGGTGCAGAGGCCATAGCGGGAGGCTCCATGAAGACTGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp GAGAAGCTGGCGGCCTCTGCGGTATACACTCGCAGCTaGTGGGCCAACGTCAATGCATTGGAGGCGTTGATG +
Preference number: 6 (lower is better)
Translates to: EKLAASAVYTRS*WANVNALEALM
Trigger: CATCAACGCCTCCAATGCATTGACGTTGGCCCACCAGCTGCGAGTGTATACCGCAGAGGCCGCCAGCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp GAGCCACATAGACCACGTCCATCATGTCTGAGAAGCTaGCGGCCTCTGCGGTATACACTCGCAGCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: EPHRPRPSCLRS*RPLRYTLAAGG
Trigger: CCCACCAGCTGCGAGTGTATACCGCAGAGGCCGCCAGCTTCTCAGACATGATGGACGTGGTCTATGTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp TCTTCCAGAGGGGGTGCCCTCCAACTAAGCTCCTTGTaGAGGACTCGAGCCTTGACCCCCATCCAGAGCAGT +
Preference number: 6 (lower is better)
Translates to: SSRGGALQLSSL*RTRALTPIQSS
Trigger: ACTGCTCTGGATGGGGGTCAAGGCTCGAGTCCTCCACAAGGAGCTTAGTTGGAGGGCACCCCCTCTGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp ATGCCGGCCTGCTCATCGCTCTCCATAGGAGCCCCATaGTGGTACCAGTGGATCCGGGTATCGTTGCCCAAG +
Preference number: 6 (lower is better)
Translates to: MPACSSLSIGAP*WYQWIRVSLPK
Trigger: CTTGGGCAACGATACCCGGATCCACTGGTACCACAATGGGGCTCCTATGGAGAGCGATGAGCAGGCCGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 90 bp CCCTCAGCTCTTCCCCTGGCTCCAGAGAGATCCTGTTACCCTGCTTaGGATTCTGGGCCACATGGCTCCGTAAGTGAAGGCCTGCACACA +
Preference number: 6 (lower is better)
Translates to: PSALPLAPERSCYPA*DSGPHGSVSEGLHT
Trigger: TGTGTGCAGGCCTTCACTTACGGAGCCATGTGGCCCAGAATCCAAAGCAGGGTAACAGGATCTCTCTGGAGCCAGGGGAAGAGCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 72 bp GCAGCTGGTGGGCCAACGTCAATGCATTGGAGGCGTTaGTGGGCATCAGCACAAAGGTGTAGAGCACCCGAG +
Preference number: 6 (lower is better)
Translates to: AAGGPTSMHWRR*WASAQRCRAPE
Trigger: CTCGGGTGCTCTACACCTTTGTGCTGATGCCCATCAACGCCTCCAATGCATTGACGTTGGCCCACCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp CTGGACTCCAGGAGAATATACGCCATCACCATCCTCTaGGGGCGCAGGTGTCCCTACTCCTGCGCTAACTGT +
Preference number: 6 (lower is better)
Translates to: LDSRRIYAITIL*GRRCPYSCANC
Trigger: ACAGTTAGCGCAGGAGTAGGGACACCTGCGCCCCCAGAGGATGGTGATGGCGTATATTCTCCTGGAGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp AGACGGTGGTCTCGCTTTTCCAGAGGCCAGTCTTCATaGAGCCTCCCGCTATGGCCTCTGCACCAGTTACAC +
Preference number: 6 (lower is better)
Translates to: RRWSRFSRGQSS*SLPLWPLHQLH
Trigger: GTGTAACTGGTGCAGAGGCCATAGCGGGAGGCTCCATGAAGACTGGCCTCTGGAAAAGCGAGACCACCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp GCCCTCCAACTAAGCTCCTTGTGGAGGACTCGAGCCTaGACCCCCATCCAGAGCAGTGACGACAAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: ALQLSSLWRTRA*TPIQSSDDKEE
Trigger: CTCTTCCTTGTCGTCACTGCTCTGGATGGGGGTCAAGGCTCGAGTCCTCCACAAGGAGCTTAGTTGGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 90 bp TCAAGTAGAACCGGAGCATGGGGCGAGGACCAGGCGGAGCTGTGGTaGAGGATGTACGTGATGATGGTGGAGAAGAGACAGAGTAGCAGC +
Preference number: 6 (lower is better)
Translates to: SSRTGAWGEDQAELW*RMYVMMVEKRQSSS
Trigger: GCTGCTACTCTGTCTCTTCTCCACCATCATCACGTACATCCTCAACCACAGCTCCGCCTGGTCCTCGCCCCATGCTCCGGTTCTACTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000179351.2
CDS GCA 72 bp CTCCGTCAAGTTTCCCACACCACAGCCACTGGTTCCTaGAAATATGACTGGGGTGGCCACACCACGCCTCTT +
Preference number: 6 (lower is better)
Translates to: LRQVSHTTATGS*KYDWGGHTTPL
Trigger: AAGAGGCGTGGTGTGGCCACCCCAGTCATATTTGCAGGAACCAGTGGCTGTGGTGTGGGAAACTTGACGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS CCA 72 bp CTTGTTGTTGCTCAAGAGCAAGGTGATGGTGCCGTTTaGCAGAAGGCCGGGATCTGGAGGTTCGGGGAGATC +
Preference number: 6 (lower is better)
Translates to: LVVAQEQGDGAV*QKAGIWRFGEI
Trigger: GATCTCCCCGAACCTCCAGATCCCGGCCTTCTGCCAAACGGCACCATCACCTTGCTCTTGAGCAACAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp CTATCTCCACCTTCTTGCTGGTGTTGCCTTGGACTGTaGACACGGAGCACTCCCATTCACCAGAGGCCCACA +
Preference number: 6 (lower is better)
Translates to: LSPPSCWCCLGL*TRSTPIHQRPT
Trigger: TGTGGGCCTCTGGTGAATGGGAGTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp CAGAGGTCTCCAGCACTACTATCTCCACCTTCTTGCTaGTGTTGCCTTGGACTGTGGACACGGAGCACTCCC +
Preference number: 6 (lower is better)
Translates to: QRSPALLSPPSC*CCLGLWTRSTP
Trigger: GGGAGTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAGTAGTGCTGGAGACCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp CTTCCCCTGGCTCCAGAGAGATCCTGTTACCCTGCTTaGGATTCTGGGCCACATGGCTCCGTAAGTGAAGGC +
Preference number: 6 (lower is better)
Translates to: LPLAPERSCYPA*DSGPHGSVSEG
Trigger: GCCTTCACTTACGGAGCCATGTGGCCCAGAATCCAAAGCAGGGTAACAGGATCTCTCTGGAGCCAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 90 bp TCTCCCAGACCTAGGAAGGCTCCAGGCTGCACAGTGCTGATGACATaGCTCCTCAGGTCCAACTTCTCCAACAGGGACAGTCCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: SPRPRKAPGCTVLMT*LLRSNFSNRDSPKK
Trigger: CTTCTTGGGACTGTCCCTGTTGGAGAAGTTGGACCTGAGGAGCAATGTCATCAGCACTGTGCAGCCTGGAGCCTTCCTAGGTCTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 72 bp GAGCACTCCCATTCACCAGAGGCCCACACACCAATGTaGGACAGGGTCAGCTCACTGGTGATGAAGGTGCAA +
Preference number: 6 (lower is better)
Translates to: EHSHSPEAHTPM*DRVSSLVMKVQ
Trigger: TTGCACCTTCATCACCAGTGAGCTGACCCTGTCTCACATTGGTGTGTGGGCCTCTGGTGAATGGGAGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS TCA 72 bp GATCATCTGAGCCACATAGACCACGTCCATCATGTCTaGGAAGCTGGCGGCCTCTGCGGTATACACTCGCAG +
Preference number: 6 (lower is better)
Translates to: DHLSHIDHVHHV*EAGGLCGIHSQ
Trigger: CTGCGAGTGTATACCGCAGAGGCCGCCAGCTTCTCAGACATGATGGACGTGGTCTATGTGGCTCAGATGATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp AGGCAGAGGTCTCCAGCACTACTATCTCCACCTTCTTaGTGGTGTTGCCTTGGACTGTGGACACGGAGCACT +
Preference number: 6 (lower is better)
Translates to: RQRSPALLSPPS*WCCLGLWTRST
Trigger: AGTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAGTAGTGCTGGAGACCTCTGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp TGCGGTATACACTCGCAGCTGGTGGGCCAACGTCAATaGATTGGAGGCGTTGATGGGCATCAGCACAAAGGT +
Preference number: 6 (lower is better)
Translates to: CGIHSQLVGQRQ*IGGVDGHQHKG
Trigger: ACCTTTGTGCTGATGCCCATCAACGCCTCCAATGCATTGACGTTGGCCCACCAGCTGCGAGTGTATACCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp GTCATGGCCATATGGAAACAAAGGTTCAGCAGCATGTaGCAACCCTTCCGGGACACGTGGATGGAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: VMAIWKQRFSSM*QPFRDTWMELW
Trigger: CCACAGCTCCATCCACGTGTCCCGGAAGGGTTGGCACATGCTGCTGAACCTTTGTTTCCATATGGCCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp GCACCAGTTACACTGGCATCCTCATACTTGCCCCCTTaGGGGGCACCGTTAAGACTGGTAGTGTTGAGCGGA +
Preference number: 6 (lower is better)
Translates to: APVTLASSYLPP*GAPLRLVVLSG
Trigger: TCCGCTCAACACTACCAGTCTTAACGGTGCCCCCAAAGGGGGCAAGTATGAGGATGCCAGTGTAACTGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp CAGCTGCTCCAGGACGGGAAGTGTTGTTGCCGTGGCTaGATGTGGAAGGATGACAGAGAAATGTTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: QLLQDGKCCCRG*MWKDDREMLGL
Trigger: GAGGCCCAACATTTCTCTGTCATCCTTCCACATCAAGCCACGGCAACAACACTTCCCGTCCTGGAGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000179207.3
CDS GCA 72 bp TCATGGATAAGGTTTTCAGCAAGGACGATGCCGGCCTaGTCATCGCTCTCCATAGGAGCCCCATTGTGGTAC +
Preference number: 6 (lower is better)
Translates to: SWIRFSARTMPA*SSLSIGAPLWY
Trigger: GTACCACAATGGGGCTCCTATGGAGAGCGATGAGCAGGCCGGCATCGTCCTTGCTGAAAACCTTATCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp TCTCCAGCACTACTATCTCCACCTTCTTGCTGGTGTTaGCTTGGACTGTGGACACGGAGCACTCCCATTCAC +
Preference number: 6 (lower is better)
Translates to: SPALLSPPSCWC*LGLWTRSTPIH
Trigger: GTGAATGGGAGTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAGTAGTGCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS GCA 72 bp GCCTCCAGTGCCACATTTCTTGAATTCACAGAGATGTaGTGGGCATGGGGGCTAAGAGCAGCTCCTCCGATT +
Preference number: 6 (lower is better)
Translates to: ASSATFLEFTEM*WAWGLRAAPPI
Trigger: AATCGGAGGAGCTGCTCTTAGCCCCCATGCCCAGCACATCTCTGTGAATTCAAGAAATGTGGCACTGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000179207.3
CDS GCA 72 bp ATCACCATCCTCTGGGGGCGCAGGTGTCCCTACTCCTaGGCTAACTGTAGCCAAAAGAGAACCAGAGTCATT +
Preference number: 6 (lower is better)
Translates to: ITILWGRRCPYS*ANCSQKRTRVI
Trigger: AATGACTCTGGTTCTCTTTTGGCTACAGTTAGCGCAGGAGTAGGGACACCTGCGCCCCCAGAGGATGGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp GACAGGGTCAGCTCACTGGTGATGAAGGTGCAATCATaGATAAGGTTTTCAGCAAGGACGATGCCGGCCTGC +
Preference number: 6 (lower is better)
Translates to: DRVSSLVMKVQS*IRFSARTMPAC
Trigger: GCAGGCCGGCATCGTCCTTGCTGAAAACCTTATCCATGATTGCACCTTCATCACCAGTGAGCTGACCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp AGCACTACTATCTCCACCTTCTTGCTGGTGTTGCCTTaGACTGTGGACACGGAGCACTCCCATTCACCAGAG +
Preference number: 6 (lower is better)
Translates to: STTISTFLLVLP*TVDTEHSHSPE
Trigger: CTCTGGTGAATGGGAGTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAGTAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp TTTTCCAGAGGCCAGTCTTCATGGAGCCTCCCGCTATaGCCTCTGCACCAGTTACACTGGCATCCTCATACT +
Preference number: 6 (lower is better)
Translates to: FSRGQSSWSLPL*PLHQLHWHPHT
Trigger: AGTATGAGGATGCCAGTGTAACTGGTGCAGAGGCCATAGCGGGAGGCTCCATGAAGACTGGCCTCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp CAGCACTACTATCTCCACCTTCTTGCTGGTGTTGCCTaGGACTGTGGACACGGAGCACTCCCATTCACCAGA +
Preference number: 6 (lower is better)
Translates to: QHYYLHLLAGVA*DCGHGALPFTR
Trigger: TCTGGTGAATGGGAGTGCTCCGTGTCCACAGTCCAAGGCAACACCAGCAAGAAGGTGGAGATAGTAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp CCCAAGAAGGATCCATTGCGGAGCCCAGTAATCTTGTaGTTGCTCAAGAGCAAGGTGATGGTGCCGTTTGGC +
Preference number: 6 (lower is better)
Translates to: PKKDPLRSPVIL*LLKSKVMVPFG
Trigger: GCCAAACGGCACCATCACCTTGCTCTTGAGCAACAACAAGATTACTGGGCTCCGCAATGGATCCTTCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp ACGCTATTCTTGATGTGGAAGGATGACAGAGAAATGTaGGGCCTCCCAGTGGTGCAGCGGAACCTAAGCTGC +
Preference number: 6 (lower is better)
Translates to: TLFLMWKDDREM*GLPVVQRNLSC
Trigger: GCAGCTTAGGTTCCGCTGCACCACTGGGAGGCCCAACATTTCTCTGTCATCCTTCCACATCAAGAATAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000033876.14
CDS CAA 90 bp AACAGGGACAGTCCCAAGAAGGATCCATTGCGGAGCCCAGTAATCTaGTTGTTGCTCAAGAGCAAGGTGATGGTGCCGTTTGGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: NRDSPKKDPLRSPVI*LLLKSKVMVPFGRR
Trigger: CCTTCTGCCAAACGGCACCATCACCTTGCTCTTGAGCAACAACAAGATTACTGGGCTCCGCAATGGATCCTTCTTGGGACTGTCCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 90 bp CTCAGGTCCAACTTCTCCAACAGGGACAGTCCCAAGAAGGATCCATaGCGGAGCCCAGTAATCTTGTTGTTGCTCAAGAGCAAGGTGATG +
Preference number: 6 (lower is better)
Translates to: LRSNFSNRDSPKKDP*RSPVILLLLKSKVM
Trigger: CATCACCTTGCTCTTGAGCAACAACAAGATTACTGGGCTCCGCAATGGATCCTTCTTGGGACTGTCCCTGTTGGAGAAGTTGGACCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp AAGAAGGATCCATTGCGGAGCCCAGTAATCTTGTTGTaGCTCAAGAGCAAGGTGATGGTGCCGTTTGGCAGA +
Preference number: 6 (lower is better)
Translates to: KKDPLRSPVILL*LKSKVMVPFGR
Trigger: TCTGCCAAACGGCACCATCACCTTGCTCTTGAGCAACAACAAGATTACTGGGCTCCGCAATGGATCCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp AGTCCCAAGAAGGATCCATTGCGGAGCCCAGTAATCTaGTTGTTGCTCAAGAGCAAGGTGATGGTGCCGTTT +
Preference number: 6 (lower is better)
Translates to: SPKKDPLRSPVI*LLLKSKVMVPF
Trigger: AAACGGCACCATCACCTTGCTCTTGAGCAACAACAAGATTACTGGGCTCCGCAATGGATCCTTCTTGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CAA 72 bp AACTTCTCCAACAGGGACAGTCCCAAGAAGGATCCATaGCGGAGCCCAGTAATCTTGTTGTTGCTCAAGAGC +
Preference number: 6 (lower is better)
Translates to: NFSNRDSPKKDP*RSPVILLLLKS
Trigger: GCTCTTGAGCAACAACAAGATTACTGGGCTCCGCAATGGATCCTTCTTGGGACTGTCCCTGTTGGAGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8
CDS CCA 72 bp CAGAAACTCAGTACCAAAGTCCACAATCTTAAGGGCTaGCAGCTCATCAAAGACCCCAGGTTGCAGACTAGA +
Preference number: 6 (lower is better)
Translates to: QKLSTKVHNLKG*QLIKDPRLQTR
Trigger: TCTAGTCTGCAACCTGGGGTCTTTGATGAGCTGCCAGCCCTTAAGATTGTGGACTTTGGTACTGAGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033876.14
ENSMUST00000178514.8