Pregenerated sensors for ADGRA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025475Ensembl transcript IDs: ENSMUST00000026548.14
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTAGGCCGAGGTGCCAGATGGCTCCCCCAGTGGAGATGCAGGTGTaGGGTAACGCAAGGACAGCAGGGGACAGGAAACTGCCCAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SRPRCQMAPPVEMQV*GNARTAGDRKLPSV Trigger: CACACTGGGCAGTTTCCTGTCCCCTGCTGTCCTTGCGTTACCTCACACCTGCATCTCCACTGGGGGAGCCATCTGGCACCTCGGCCTACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR TCA 90 bp | TGTGAGGTAACGCAAGGACAGCAGGGGACAGGAAACTGCCCAGTGTaGGCGAGCTCTGGAGGGCCACTGCGGTGGTCCCTAGAGCAAAAC | + |
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Preference number: 1 (lower is better) Translates to: CEVTQGQQGTGNCPV*ASSGGPLRWSLEQN Trigger: GTTTTGCTCTAGGGACCACCGCAGTGGCCCTCCAGAGCTCGCTCACACTGGGCAGTTTCCTGTCCCCTGCTGTCCTTGCGTTACCTCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CCA 90 bp | CCTGCTAGCCTCCTTACTCAGATACTGAGTGTGTCTGCCTCTAGATaGCACTGCCCACCACAGGCTGCAGAATGCTGCCGCCTCGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: PASLLTQILSVSASR*HCPPQAAECCRLAS Trigger: GGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAGAGGCAGACACACTCAGTATCTGAGTAAGGAGGCTAGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR GCA 90 bp | GCACTGCCCACCACAGGCTGCAGAATGCTGCCGCCTCGCCTCCAATaGTCTAGGAACTTACCTATGCCCTGTTCTCTGAGGCGGTTATCG | + |
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Preference number: 1 (lower is better) Translates to: ALPTTGCRMLPPRLQ*SRNLPMPCSLRRLS Trigger: CGATAACCGCCTCAGAGAACAGGGCATAGGTAAGTTCCTAGAGCATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR TCA 90 bp | TTGATGGCCCTTCCAGTCCACATAGCAAAGGGCCACTCCCTGCTCTaGAGCTCCTCCAGGGACACGTGGTGGCACTGGCGAAGAAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: LMALPVHIAKGHSLL*SSSRDTWWHWRRSC Trigger: ACAACTTCTTCGCCAGTGCCACCACGTGTCCCTGGAGGAGCTTCAGAGCAGGGAGTGGCCCTTTGCTATGTGGACTGGAAGGGCCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR GCA 90 bp | AGCCTCCTTACTCAGATACTGAGTGTGTCTGCCTCTAGATGGCACTaGCCACCACAGGCTGCAGAATGCTGCCGCCTCGCCTCCAATGCT | + |
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Preference number: 1 (lower is better) Translates to: SLLTQILSVSASRWH*PPQAAECCRLASNA Trigger: AGCATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAGAGGCAGACACACTCAGTATCTGAGTAAGGAGGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CCA 90 bp | GCAAGGACAGCAGGGGACAGGAAACTGCCCAGTGTGAGCGAGCTCTaGAGGGCCACTGCGGTGGTCCCTAGAGCAAAACCTAACATATAT | + |
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Preference number: 1 (lower is better) Translates to: ARTAGDRKLPSVSEL*RATAVVPRAKPNIY Trigger: ATATATGTTAGGTTTTGCTCTAGGGACCACCGCAGTGGCCCTCCAGAGCTCGCTCACACTGGGCAGTTTCCTGTCCCCTGCTGTCCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CCA 90 bp | GAGAAAGCTGGAGAGGAAGGGTGGACAGTCACAGGTTGGCATCTCTaGGCTCTCACCTCTGTGAGGATCTCCCCTGGGACAAGACACTTG | + |
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Preference number: 1 (lower is better) Translates to: EKAGEEGWTVTGWHL*ALTSVRISPGTRHL Trigger: CAAGTGTCTTGTCCCAGGGGAGATCCTCACAGAGGTGAGAGCCCAGAGATGCCAACCTGTGACTGTCCACCCTTCCTCTCCAGCTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR TCA 90 bp | TGTTTCCCCTCCCCATGGCTCCATACCAGGCCCATCCTTAGCACTTaGAATGACCTCAGGCTACCAGGCCAGGGCCATTTCCCATTACAG | + |
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Preference number: 1 (lower is better) Translates to: CFPSPWLHTRPILST*NDLRLPGQGHFPLQ Trigger: CTGTAATGGGAAATGGCCCTGGCCTGGTAGCCTGAGGTCATTTCAAGTGCTAAGGATGGGCCTGGTATGGAGCCATGGGGAGGGGAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CCA 90 bp | AGGCCCAGGGGAGCAGCCTGGATGGGGGCCAAGCCTCTCCCATACTaGTCTTCCTTGTCAAGACTGAGAAACACACACATGAATGCTACT | + |
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Preference number: 1 (lower is better) Translates to: RPRGAAWMGAKPLPY*SSLSRLRNTHMNAT Trigger: AGTAGCATTCATGTGTGTGTTTCTCAGTCTTGACAAGGAAGACCAGTATGGGAGAGGCTTGGCCCCCATCCAGGCTGCTCCCCTGGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CCA 90 bp | ACCTTCATCCGTGATGACCGTCACACCCCACTCAGCCCCTCCTTGTaGGACGGAGAATCTGACTACTACATGCTCACAATGGGACAGAAT | + |
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Preference number: 1 (lower is better) Translates to: TFIRDDRHTPLSPSL*DGESDYYMLTMGQN Trigger: ATTCTGTCCCATTGTGAGCATGTAGTAGTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACGGATGAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CCA 90 bp | GCTTGGGGACTAGTGGCGGTTGTATGTGGCCCAGTGTTCTTCCCATaGGTTCTTATACAACAAAAGAGATCATGGCTGAGGGCTGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: AWGLVAVVCGPVFFP*VLIQQKRSWLRAGN Trigger: GTTCCCAGCCCTCAGCCATGATCTCTTTTGTTGTATAAGAACCCATGGGAAGAACACTGGGCCACATACAACCGCCACTAGTCCCCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CCA 90 bp | CAAAAGAGATCATGGCTGAGGGCTGGGAACCATTTCAGAACCACTTaGTCATTTGATGGCCCTTCCAGTCCACATAGCAAAGGGCCACTC | + |
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Preference number: 1 (lower is better) Translates to: QKRSWLRAGNHFRTT*SFDGPSSPHSKGPL Trigger: GAGTGGCCCTTTGCTATGTGGACTGGAAGGGCCATCAAATGACCAAGTGGTTCTGAAATGGTTCCCAGCCCTCAGCCATGATCTCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CCA 90 bp | CAGAGAAACCCAGCACTCAGGGCTGTGATACACACTAATTGTTTGTaGGTGCGTGTGAACACCAATGCGTCTGTGTGTGGACAGTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: QRNPALRAVIHTNCL*VRVNTNASVCGQCG Trigger: ACCACACTGTCCACACACAGACGCATTGGTGTTCACACGCACCCACAAACAATTAGTGTGTATCACAGCCCTGAGTGCTGGGTTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR GCA 90 bp | AACTTACCTATGCCCTGTTCTCTGAGGCGGTTATCGGGAAGGCTATaGTCTGTGAAGCAAGTCACAGACTCACCCACATCTGCAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: NLPMPCSLRRLSGRL*SVKQVTDSPTSAEK Trigger: TTTCTCTGCAGATGTGGGTGAGTCTGTGACTTGCTTCACAGAGCATAGCCTTCCCGATAACCGCCTCAGAGAACAGGGCATAGGTAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CCA 90 bp | CCAGCCCGACCAAGGACAAACAATGTAAAACACTGTATTTTCCTCTaGATGGTCTGTATCTACAGTACGTACACAGCATGGTGGGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: PARPRTNNVKHCIFL*MVCIYSTYTAWWVL Trigger: CAGAACCCACCATGCTGTGTACGTACTGTAGATACAGACCATCCAGAGGAAAATACAGTGTTTTACATTGTTTGTCCTTGGTCGGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR GCA 90 bp | CTAGATGGCACTGCCCACCACAGGCTGCAGAATGCTGCCGCCTCGCCTCCAATGCAAAGGGCCACTCCCTaGTCTGAAGCTCCTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LDGTAHHRLQNAAASPPMQRATP*SEAPPG Trigger: CCCTGGAGGAGCTTCAGAGCAGGGAGTGGCCCTTTG...CATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | CTAGATGGCACTGCCCACCACAGGCTGCAGAATGCTGCCGCCTCGCCTCCAATGTGGACAGTCACAGGTTaGCATCTCTGGGCTCTCACC | + |
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Preference number: 2 (lower is better) Translates to: LDGTAHHRLQNAAASPPMWTVTG*HLWALT Trigger: GGTGAGAGCCCAGAGATGCCAACCTGTGACTGTCCA...CATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | CGTGATGACCGTCACACCCCACTCAGCCCCTCCTTGTGGGACGGAGAATCTGACAGATGGCTCCCCCAGTaGAGATGCAGGTGTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: RDDRHTPLSPSLWDGESDRWLPQ*RCRCEV Trigger: TACCTCACACCTGCATCTCCACTGGGGGAGCCATCT...GTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | GCACGTGCATACATGTGGTGGGCAAGCGTGTGGATGCACGTGTATGTGGTGTGCTGTTTCCCCTCCCCATaGCTCCATACCAGGCCCATC | + |
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Preference number: 2 (lower is better) Translates to: ARAYMWWASVWMHVYVVCCFPSP*LHTRPI Trigger: GATGGGCCTGGTATGGAGCCATGGGGAGGGGAAACA...GCACACCACATACACGTGCATCCACACGCTTGCCCACCACATGTATGCACGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR GCA 90 bp | GCACGTGCATACATGTGGTGGGCAAGCGTGTGGATGCACGTGTATGTGGTGTGCCTCCCCCAGTGGAGATaGAGGTGTGAGGTAACGCAA | + |
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Preference number: 2 (lower is better) Translates to: ARAYMWWASVWMHVYVVCLPQWR*RCEVTQ Trigger: TTGCGTTACCTCACACCTGCATCTCCACTGGGGGAG...GCACACCACATACACGTGCATCCACACGCTTGCCCACCACATGTATGCACGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CAA 90 bp | GGAGCAGCCTGGATGGGGGCCAAGCCTCTCCCATACTGGTCTTCCTaGTCAAGACTGAGAAACACACACATGAATGCTACTGACCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: GAAWMGAKPLPYWSS*SRLRNTHMNATDQP Trigger: GGGCTGGTCAGTAGCATTCATGTGTGTGTTTCTCAGTCTTGACAAGGAAGACCAGTATGGGAGAGGCTTGGCCCCCATCCAGGCTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR GCA 90 bp | CGTGATGACCGTCACACCCCACTCAGCCCCTCCTTGTGGGACGGAGAATCTGACAGCAGCGAGGGAAGGTaGTATAAACAGAAAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: RDDRHTPLSPSLWDGESDSSEGR*YKQKAG Trigger: ACCTGCTTTCTGTTTATAGCACCTTCCCTCGCTGCT...GTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CAA 90 bp | GAAACCTTCATCCGTGATGACCGTCACACCCCACTCAGCCCCTCCTaGTGGGACGGAGAATCTGACTACTACATGCTCACAATGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: ETFIRDDRHTPLSPS*WDGESDYYMLTMGQ Trigger: CTGTCCCATTGTGAGCATGTAGTAGTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACGGATGAAGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR TCA 90 bp | TACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTTACAGGTGCAGGTGGTaGGTAGGCCGAGGTGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: YSTYTAWWVLHTSATQAGYRCRW*VGRGAR Trigger: TCTGGCACCTCGGCCTACTCACCACCTGCACCTGTA...ACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | CTAGATGGCACTGCCCACCACAGGCTGCAGAATGCTGCCGCCTCGCCTCCAATGCACACTAATTGTTTGTaGGTGCGTGTGAACACCAAT | + |
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Preference number: 2 (lower is better) Translates to: LDGTAHHRLQNAAASPPMHTNCL*VRVNTN Trigger: ATTGGTGTTCACACGCACCCACAAACAATTAGTGTG...CATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR TCA 90 bp | GTATCTACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGGGGCTCTCACCTCTGTaGGGATCTCCCCTGGGACAA | + |
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Preference number: 2 (lower is better) Translates to: VSTVRTQHGGFCTHQLHKGLSPL*GSPLGQ Trigger: TTGTCCCAGGGGAGATCCTCACAGAGGTGAGAGCCC...CTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTAGATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | TACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTGCTGAAACAGCCTGGTaGTCCTTGGCTACCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: YSTYTAWWVLHTSATQAGAETAW*SLATHL Trigger: CAGGTGGGTAGCCAAGGACCACCAGGCTGTTTCAGC...ACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR TCA 90 bp | TACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTGTGGAGATGCAGGTGTaGGGTAACGCAAGGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: YSTYTAWWVLHTSATQAGVEMQV*GNARTA Trigger: TGCTGTCCTTGCGTTACCTCACACCTGCATCTCCAC...ACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | CGTGATGACCGTCACACCCCACTCAGCCCCTCCTTGTGGGACGGAGAATCTGACCCAGTGTTCTTCCCATaGGTTCTTATACAACAAAAG | + |
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Preference number: 2 (lower is better) Translates to: RDDRHTPLSPSLWDGESDPVFFP*VLIQQK Trigger: CTTTTGTTGTATAAGAACCCATGGGAAGAACACTGG...GTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | TACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTGCTGGAGAGGAAGGGTaGACAGTCACAGGTTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: YSTYTAWWVLHTSATQAGAGEEG*TVTGWH Trigger: ATGCCAACCTGTGACTGTCCACCCTTCCTCTCCAGC...ACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CAA 90 bp | CTGCAGAGAAACCCAGCACTCAGGGCTGTGATACACACTAATTGTTaGTGGGTGCGTGTGAACACCAATGCGTCTGTGTGTGGACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LQRNPALRAVIHTNC*WVRVNTNASVCGQC Trigger: ACACTGTCCACACACAGACGCATTGGTGTTCACACGCACCCACAAACAATTAGTGTGTATCACAGCCCTGAGTGCTGGGTTTCTCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR GCA 90 bp | TACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTAGACTCACCCACATCTaGAGAGAAACCCAGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: YSTYTAWWVLHTSATQAGRLTHI*RETQHS Trigger: TGAGTGCTGGGTTTCTCTGCAGATGTGGGTGAGTCT...ACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | GTATCTACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGAGTGGCGGTTGTATGTaGCCCAGTGTTCTTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: VSTVRTQHGGFCTHQLHKSGGCM*PSVLPM Trigger: CATGGGAAGAACACTGGGCCACATACAACCGCCACT...CTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTAGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | GCACGTGCATACATGTGGTGGGCAAGCGTGTGGATGCACGTGTATGTGGTGTGCATATACTCTTTGAGGTaGGGCTTTGTACCCAAAATG | + |
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Preference number: 2 (lower is better) Translates to: ARAYMWWASVWMHVYVVCIYSLR*GFVPKM Trigger: CATTTTGGGTACAAAGCCCCACCTCAAAGAGTATAT...GCACACCACATACACGTGCATCCACACGCTTGCCCACCACATGTATGCACGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR TCA 90 bp | GTATCTACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGAACCACTTGGTCATTTaGTGGCCCTTCCAGTCCACA | + |
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Preference number: 2 (lower is better) Translates to: VSTVRTQHGGFCTHQLHKNHLVI*WPFQST Trigger: TGTGGACTGGAAGGGCCATCAAATGACCAAGTGGTT...CTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTAGATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR GCA 90 bp | CACCCACATCTGCAGAGAAACCCAGCACTCAGGGCTGTGATACACACTAATTGTACAGTGTGGTATGTGTaGATGTGTGGTAGTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: HPHLQRNPALRAVIHTNCTVWYV*MCGSVQ Trigger: CTGCACACTACCACACATGCACACATACCACACTGT...ACAATTAGTGTGTATCACAGCCCTGAGTGCTGGGTTTCTCTGCAGATGTGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | GCTATGCTCTGTGAAGCAAGTCACAGACTCACCCACATCTGCAGAGAAACCCAGCATTTCAGAACCACTTaGTCATTTGATGGCCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: AMLCEASHRLTHICRETQHFRTT*SFDGPS Trigger: GGAAGGGCCATCAAATGACCAAGTGGTTCTGAAATG...CTGGGTTTCTCTGCAGATGTGGGTGAGTCTGTGACTTGCTTCACAGAGCATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTCCCATACTGGTCTTCCTTGTCAAGACTGAGAAACACACACATGAATGCATCATGGCTGAGGGCTaGGAACCATTTCAGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: ASPILVFLVKTEKHTHECIMAEG*EPFQNH Trigger: GTGGTTCTGAAATGGTTCCCAGCCCTCAGCCATGAT...GCATTCATGTGTGTGTTTCTCAGTCTTGACAAGGAAGACCAGTATGGGAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | GAATGCTGCTTTAAGGGATATCACAGAGGAGCTTATGAATATCAGCTCTGCCTGACAGGTTGGCATCTCTaGGCTCTCACCTCTGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: ECCFKGYHRGAYEYQLCLTGWHL*ALTSVR Trigger: CCTCACAGAGGTGAGAGCCCAGAGATGCCAACCTGT...CAGGCAGAGCTGATATTCATAAGCTCCTCTGTGATATCCCTTAAAGCAGCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR CCA 90 bp | GCTATGCTCTGTGAAGCAAGTCACAGACTCACCCACATCTGCAGAGAAACCCAGATATGCACTACAAACTaGGAAGAGAAAGCTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: AMLCEASHRLTHICRETQICTTN*EEKAGE Trigger: CTCTCCAGCTTTCTCTTCCCAGTTTGTAGTGCATAT...CTGGGTTTCTCTGCAGATGTGGGTGAGTCTGTGACTTGCTTCACAGAGCATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR GCA 90 bp | CACCCACATCTGCAGAGAAACCCAGCACTCAGGGCTGTGATACACACTAATTGTAATCTGACTACTACATaGTCACAATGGGACAGAATC | + |
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Preference number: 2 (lower is better) Translates to: HPHLQRNPALRAVIHTNCNLTTT*SQWDRI Trigger: GATTCTGTCCCATTGTGAGCATGTAGTAGTCAGATT...ACAATTAGTGTGTATCACAGCCCTGAGTGCTGGGTTTCTCTGCAGATGTGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR GCA 90 bp | TACCCACCTGAGGGATGGGTACAGAATGCTGCTTTAAGGGATATCACAGAGGAGACATATGTAGGCATATaGACTACAAACTGGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: YPPEGWVQNAALRDITEETYVGI*TTNWEE Trigger: CTCTTCCCAGTTTGTAGTGCATATGCCTACATATGT...CTCCTCTGTGATATCCCTTAAAGCAGCATTCTGTACCCATCCCTCAGGTGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTCCCATACTGGTCTTCCTTGTCAAGACTGAGAAACACACACATGAATGCCAAAAGGCTCATTGTTaGAATATACTCTTTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ASPILVFLVKTEKHTHECQKAHC*NILFEV Trigger: CACCTCAAAGAGTATATTTCAACAATGAGCCTTTTG...GCATTCATGTGTGTGTTTCTCAGTCTTGACAAGGAAGACCAGTATGGGAGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR TCA 72 bp | ACGCAAGGACAGCAGGGGACAGGAAACTGCCCAGTGTaGGCGAGCTCTGGAGGGCCACTGCGGTGGTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: TQGQQGTGNCPV*ASSGGPLRWSL Trigger: TAGGGACCACCGCAGTGGCCCTCCAGAGCTCGCTCACACTGGGCAGTTTCCTGTCCCCTGCTGTCCTTGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR TCA 72 bp | CAGGCCAGGGCCATTTCCCATTACAGGTGCAGGTGGTaGGTAGGCCGAGGTGCCAGATGGCTCCCCCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: QARAISHYRCRW*VGRGARWLPQW Trigger: CCACTGGGGGAGCCATCTGGCACCTCGGCCTACTCACCACCTGCACCTGTAATGGGAAATGGCCCTGGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| 3UTR CCA 72 bp | GCAGGGGACAGGAAACTGCCCAGTGTGAGCGAGCTCTaGAGGGCCACTGCGGTGGTCCCTAGAGCAAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: AGDRKLPSVSEL*RATAVVPRAKP Trigger: AGGTTTTGCTCTAGGGACCACCGCAGTGGCCCTCCAGAGCTCGCTCACACTGGGCAGTTTCCTGTCCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR TCA 72 bp | AGGTGCCAGATGGCTCCCCCAGTGGAGATGCAGGTGTaGGGTAACGCAAGGACAGCAGGGGACAGGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: RCQMAPPVEMQV*GNARTAGDRKL Trigger: CAGTTTCCTGTCCCCTGCTGTCCTTGCGTTACCTCACACCTGCATCTCCACTGGGGGAGCCATCTGGCACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR GCA 72 bp | GCCTCTAGATGGCACTGCCCACCACAGGCTGCAGAATaGTGCCGCCTCGCCTCCAATGCTCTAGGAACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: ASRWHCPPQAAE*CRLASNALGTY Trigger: GTAAGTTCCTAGAGCATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR GCA 72 bp | ACTCAGATACTGAGTGTGTCTGCCTCTAGATGGCACTaGCCACCACAGGCTGCAGAATGCTGCCGCCTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: TQILSVSASRWH*PPQAAECCRLA Trigger: GGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAGAGGCAGACACACTCAGTATCTGAGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR GCA 72 bp | ACCACAGGCTGCAGAATGCTGCCGCCTCGCCTCCAATaGTCTAGGAACTTACCTATGCCCTGTTCTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TTGCRMLPPRLQ*SRNLPMPCSLR Trigger: CCTCAGAGAACAGGGCATAGGTAAGTTCCTAGAGCATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR GCA 72 bp | TCTAGATGGCACTGCCCACCACAGGCTGCAGAATGCTaGCGCCTCGCCTCCAATGCTCTAGGAACTTACCTA | + |
|
Preference number: 3 (lower is better) Translates to: SRWHCPPQAAEC*RLASNALGTYL Trigger: TAGGTAAGTTCCTAGAGCATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CCA 72 bp | CTCCTTACTCAGATACTGAGTGTGTCTGCCTCTAGATaGCACTGCCCACCACAGGCTGCAGAATGCTGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: LLTQILSVSASR*HCPPQAAECCR Trigger: GCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAGAGGCAGACACACTCAGTATCTGAGTAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CCA 72 bp | CGTGATGACCGTCACACCCCACTCAGCCCCTCCTTGTaGGACGGAGAATCTGACTACTACATGCTCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: RDDRHTPLSPSL*DGESDYYMLTM Trigger: CATTGTGAGCATGTAGTAGTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CCA 72 bp | GGAGCAGCCTGGATGGGGGCCAAGCCTCTCCCATACTaGTCTTCCTTGTCAAGACTGAGAAACACACACATG | + |
|
Preference number: 3 (lower is better) Translates to: GAAWMGAKPLPY*SSLSRLRNTHM Trigger: CATGTGTGTGTTTCTCAGTCTTGACAAGGAAGACCAGTATGGGAGAGGCTTGGCCCCCATCCAGGCTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR TCA 72 bp | CACCCCACTCAGCCCCTCCTTGTGGGACGGAGAATCTaGCTACTACATGCTCACAATGGGACAGAATCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HPTQPLLVGRRI*LLHAHNGTESS Trigger: ACTGGATTCTGTCCCATTGTGAGCATGTAGTAGTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR-3UTR CAA 90 bp | CACCCACATCTGCAGAGAAACCCAGCACTCAGGGCTGTGATACACACTAATTGTGTGGACAGTCACAGGTaGGCATCTCTGGGCTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: HPHLQRNPALRAVIHTNCVDSHR*ASLGSH Trigger: GTGAGAGCCCAGAGATGCCAACCTGTGACTGTCCAC...ACAATTAGTGTGTATCACAGCCCTGAGTGCTGGGTTTCTCTGCAGATGTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR TCA 72 bp | GAGCTGAAACAGCCTGGTGGTCCTTGGCTACCCACCTaGGGGATGGGTACAGAATGCTGCTTTAAGGGATAT | + |
|
Preference number: 3 (lower is better) Translates to: ELKQPGGPWLPT*GMGTECCFKGY Trigger: ATATCCCTTAAAGCAGCATTCTGTACCCATCCCTCAGGTGGGTAGCCAAGGACCACCAGGCTGTTTCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR GCA 72 bp | GCCCCTCCTTGTGGGACGGAGAATCTGACTACTACATaGTCACAATGGGACAGAATCCAGTCTGATAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: APPCGTENLTTT*SQWDRIQSDRG Trigger: GCCTCTATCAGACTGGATTCTGTCCCATTGTGAGCATGTAGTAGTCAGATTCTCCGTCCCACAAGGAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR GCA 72 bp | ATGCCCTGTTCTCTGAGGCGGTTATCGGGAAGGCTATaGTCTGTGAAGCAAGTCACAGACTCACCCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: MPCSLRRLSGRL*SVKQVTDSPTS Trigger: AGATGTGGGTGAGTCTGTGACTTGCTTCACAGAGCATAGCCTTCCCGATAACCGCCTCAGAGAACAGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CCA 72 bp | GCATCTCTGGGCTCTCACCTCTGTGAGGATCTCCCCTaGGACAAGACACTTGCTTGTACAAAAGGCTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: ASLGSHLCEDLP*DKTLACTKGSL Trigger: CAATGAGCCTTTTGTACAAGCAAGTGTCTTGTCCCAGGGGAGATCCTCACAGAGGTGAGAGCCCAGAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CCA 72 bp | AACAGCCTGGTGGTCCTTGGCTACCCACCTGAGGGATaGGTACAGAATGCTGCTTTAAGGGATATCACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NSLVVLGYPPEG*VQNAALRDITE Trigger: CTCTGTGATATCCCTTAAAGCAGCATTCTGTACCCATCCCTCAGGTGGGTAGCCAAGGACCACCAGGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CCA 72 bp | AAAAGTCCGTTAGTGAAAGGAGCTGAAACAGCCTGGTaGTCCTTGGCTACCCACCTGAGGGATGGGTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: KSPLVKGAETAW*SLATHLRDGYR Trigger: TCTGTACCCATCCCTCAGGTGGGTAGCCAAGGACCACCAGGCTGTTTCAGCTCCTTTCACTAACGGACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTACTTATGGAGGTAAGCTaGGGGACTAGTGGCGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TVRTQHGGFCTHQLHKQVLMEVS*GTSGGC Trigger: ACAACCGCCACTAGTCCCCAAGCTTACCTCCATAAG...TACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CCA 72 bp | TCATGGCTGAGGGCTGGGAACCATTTCAGAACCACTTaGTCATTTGATGGCCCTTCCAGTCCACATAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SWLRAGNHFRTT*SFDGPSSPHSK Trigger: TTTGCTATGTGGACTGGAAGGGCCATCAAATGACCAAGTGGTTCTGAAATGGTTCCCAGCCCTCAGCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CCA 72 bp | CTAGTGGCGGTTGTATGTGGCCCAGTGTTCTTCCCATaGGTTCTTATACAACAAAAGAGATCATGGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LVAVVCGPVFFP*VLIQQKRSWLR Trigger: CCTCAGCCATGATCTCTTTTGTTGTATAAGAACCCATGGGAAGAACACTGGGCCACATACAACCGCCACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR-3UTR CAA 90 bp | TACCCACCTGAGGGATGGGTACAGAATGCTGCTTTAAGGGATATCACAGAGGAGGTTGAAATATACTCTTaGAGGTGGGGCTTTGTACCC | + |
|
Preference number: 3 (lower is better) Translates to: YPPEGWVQNAALRDITEEVEIYS*RWGFVP Trigger: GGGTACAAAGCCCCACCTCAAAGAGTATATTTCAAC...CTCCTCTGTGATATCCCTTAAAGCAGCATTCTGTACCCATCCCTCAGGTGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR-3UTR CAA 90 bp | GTATCTACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCCTGGGACAAGACACTaGCTTGTACAAAAGGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VSTVRTQHGGFCTHQLHKPGTRH*LVQKAH Trigger: ATGAGCCTTTTGTACAAGCAAGTGTCTTGTCCCAGG...CTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTAGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CCA 72 bp | TGGATGGTCTGTATCTACAGTACGTACACAGCATGGTaGGTTCTGCACACATCAGCTACACAAGCAGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: WMVCIYSTYTAW*VLHTSATQAGK Trigger: TTTACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTAGATACAGACCATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR TCA 72 bp | TCCCATGGGTTCTTATACAACAAAAGAGATCATGGCTaGGGGCTGGGAACCATTTCAGAACCACTTGGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SHGFLYNKRDHG*GLGTISEPLGH Trigger: ATGACCAAGTGGTTCTGAAATGGTTCCCAGCCCTCAGCCATGATCTCTTTTGTTGTATAAGAACCCATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR TCA 72 bp | CTTGTCAAGACTGAGAAACACACACATGAATGCTACTaGCCAGCCCGACCAAGGACAAACAATGTAAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: LVKTEKHTHECY*PARPRTNNVKH Trigger: GTGTTTTACATTGTTTGTCCTTGGTCGGGCTGGTCAGTAGCATTCATGTGTGTGTTTCTCAGTCTTGACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR TCA 72 bp | GGGACAAGACACTTGCTTGTACAAAAGGCTCATTGTTaGAATATACTCTTTGAGGTGGGGCTTTGTACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GTRHLLVQKAHC*NILFEVGLCTQ Trigger: TTGGGTACAAAGCCCCACCTCAAAGAGTATATTTCAACAATGAGCCTTTTGTACAAGCAAGTGTCTTGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CCA 72 bp | ACACAGCCAGGTTCAATATTTAATGCCGAATTTCTTTaGTTGAATGAAGAGGTGTCTCTGTTCTCCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TQPGSIFNAEFL*LNEEVSLFSQR Trigger: CCTCTGGGAGAACAGAGACACCTCTTCATTCAACCAAAGAAATTCGGCATTAAATATTGAACCTGGCTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | CTAGATGGCACTGCCCACCACAGGCTGCAGAATGCTGCCGCCTCGCCTCCAATGGGGCGCCGGGCTTGGTaGTGGAGGTGTCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDGTAHHRLQNAAASPPMGRRAW*WRCLPG Trigger: CCCGGGGAGACACCTCCACCACCAAGCCCGGCGCCC...CATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | CGTGATGACCGTCACACCCCACTCAGCCCCTCCTTGTGGGACGGAGAATCTGACGGCATCACAGGTGGGTaGGGTCCCGGGACGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDDRHTPLSPSLWDGESDGITGG*GPGTDS Trigger: GGAGTCCGTCCCGGGACCCCACCCACCTGTGATGCC...GTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | CTAGATGGCACTGCCCACCACAGGCTGCAGAATGCTGCCGCCTCGCCTCCAATGAGAACGCACCCAGGCTaGGTTCCCAGGCCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDGTAHHRLQNAAASPPMRTHPG*VPRPSS Trigger: GCTGGATGGCCTGGGAACCCAGCCTGGGTGCGTTCT...CATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | CGTGATGACCGTCACACCCCACTCAGCCCCTCCTTGTGGGACGGAGAATCTGACGCGATGGCCGCTCTCTaGCACAGCCAGTCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDDRHTPLSPSLWDGESDAMAAL*HSQSLL Trigger: CAGCAGCGACTGGCTGTGCCAGAGAGCGGCCATCGC...GTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR GCA 90 bp | CTAGATGGCACTGCCCACCACAGGCTGCAGAATGCTGCCGCCTCGCCTCCAATGAACCTGAGCAAGGGCTaGTTAGGGTACGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDGTAHHRLQNAAASPPMNLSKG*LGYGGW Trigger: CCAGCCACCGTACCCTAAGCAGCCCTTGCTCAGGTT...CATTGGAGGCGAGGCGGCAGCATTCTGCAGCCTGTGGTGGGCAGTGCCATCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGGACTAGTGGCGGTTGTATGTGGCCCAGTGTTCTTCCCATGGGTTCTTGGCCCTCCAGAGAGCTaGTGGGGCTCTCCGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: AWGLVAVVCGPVFFPWVLGPPES*WGSPNV Trigger: CACGTTCGGAGAGCCCCACCAGCTCTCTGGAGGGCC...AAGAACCCATGGGAAGAACACTGGGCCACATACAACCGCCACTAGTCCCCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CAA 72 bp | GACTGTAGCCAGCTCCCTGAAGGCCACAGCCATGAGTaGTTTCCCCTCCCCATGGCTCCATACCAGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DCSQLPEGHSHE*FPLPMAPYQAH Trigger: ATGGGCCTGGTATGGAGCCATGGGGAGGGGAAACAACTCATGGCTGTGGCCTTCAGGGAGCTGGCTACAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | CGTGATGACCGTCACACCCCACTCAGCCCCTCCTTGTGGGACGGAGAATCTGACCACAGGATGGGGTGTTaGGTGCGATTGATGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RDDRHTPLSPSLWDGESDHRMGC*VRLMPP Trigger: TGGTGGCATCAATCGCACCCAACACCCCATCCTGTG...GTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGGACTAGTGGCGGTTGTATGTGGCCCAGTGTTCTTCCCATGGGTTCTTCGTGGAAGCAGAAGTTaGGGAGTGCGTGCCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AWGLVAVVCGPVFFPWVLRGSRS*GVRAGL Trigger: AAGGCCGGCACGCACTCCTCAACTTCTGCTTCCACG...AAGAACCCATGGGAAGAACACTGGGCCACATACAACCGCCACTAGTCCCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR GCA 90 bp | GCACGTGCATACATGTGGTGGGCAAGCGTGTGGATGCACGTGTATGTGGTGTGCCAGAGCAATGCCCACTaGTTGGCACAGGATGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARAYMWWASVWMHVYVVCQSNAH*LAQDGV Trigger: CACCCCATCCTGTGCCAAGCAGTGGGCATTGCTCTG...GCACACCACATACACGTGCATCCACACGCTTGCCCACCACATGTATGCACGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR TCA 90 bp | TACCCACCTGAGGGATGGGTACAGAATGCTGCTTTAAGGGATATCACAGAGGAGTCCAGGAAGTGGCCCTaGGACACAGCCAGGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YPPEGWVQNAALRDITEESRKWP*DTARAP Trigger: TGGGGCCCTGGCTGTGTCTCAGGGCCACTTCCTGGA...CTCCTCTGTGATATCCCTTAAAGCAGCATTCTGTACCCATCCCTCAGGTGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR TCA 90 bp | CACCCACATCTGCAGAGAAACCCAGCACTCAGGGCTGTGATACACACTAATTGTGCACGGGGTGGCAGGTaGCAGACAGCTGACATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPHLQRNPALRAVIHTNCARGGR*QTADMA Trigger: GGCCATGTCAGCTGTCTGTCACCTGCCACCCCGTGC...ACAATTAGTGTGTATCACAGCCCTGAGTGCTGGGTTTCTCTGCAGATGTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR GCA 90 bp | CGTGATGACCGTCACACCCCACTCAGCCCCTCCTTGTGGGACGGAGAATCTGACAATAGTGCAGAGCAATaGCCACTGCTTGGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RDDRHTPLSPSLWDGESDNSAEQ*PLLGTG Trigger: TCCTGTGCCAAGCAGTGGGCATTGCTCTGCACTATT...GTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGGACTAGTGGCGGTTGTATGTGGCCCAGTGTTCTTCCCATGGGTTCTTTTAGGGTACGGTGGCTaGTCTGCTCCAGGACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: AWGLVAVVCGPVFFPWVLLGYGG*SAPGHG Trigger: GCCATGTCCTGGAGCAGACCAGCCACCGTACCCTAA...AAGAACCCATGGGAAGAACACTGGGCCACATACAACCGCCACTAGTCCCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GCTATGCTCTGTGAAGCAAGTCACAGACTCACCCACATCTGCAGAGAAACCCAGGGGAAGGGGTCAGCCTaGGCACAGCAGGCCAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: AMLCEASHRLTHICRETQGKGSA*AQQANV Trigger: CACATTGGCCTGCTGTGCCCAGGCTGACCCCTTCCC...CTGGGTTTCTCTGCAGATGTGGGTGAGTCTGTGACTTGCTTCACAGAGCATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR TCA 90 bp | GCTATGCTCTGTGAAGCAAGTCACAGACTCACCCACATCTGCAGAGAAACCCAGGCAGCGGCACGAAGCTaGGCCTTGAAGGAATGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AMLCEASHRLTHICRETQAAARS*ALKECS Trigger: CGAGCATTCCTTCAAGGCTCAGCTTCGTGCCGCTGC...CTGGGTTTCTCTGCAGATGTGGGTGAGTCTGTGACTTGCTTCACAGAGCATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR TCA 90 bp | GCACGTGCATACATGTGGTGGGCAAGCGTGTGGATGCACGTGTATGTGGTGTGCCGCCGTACAGACAGCTaGAGATCATGTCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARAYMWWASVWMHVYVVCRRTDS*RSCPGS Trigger: ACTTCCTGGACATGATCTTCAGCTGTCTGTACGGCG...GCACACCACATACACGTGCATCCACACGCTTGCCCACCACATGTATGCACGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR TCA 90 bp | GAGCTCTGGAGGGCCACTGCGGTGGTCCCTAGAGCAAAACCTAACATATATATAAGGCACCTGTGCAGGTaGGGGTCATGCAGGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELWRATAVVPRAKPNIYIRHLCR*GSCRWG Trigger: TCCCCACCTGCATGACCCTCACCTGCACAGGTGCCT...TATATATATGTTAGGTTTTGCTCTAGGGACCACCGCAGTGGCCCTCCAGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GAGCTCTGGAGGGCCACTGCGGTGGTCCCTAGAGCAAAACCTAACATATATATACAGCTGACATGGCCCTaGGCAGCCTGCAGGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELWRATAVVPRAKPNIYIQLTWP*AACRLV Trigger: GACCAACCTGCAGGCTGCCCAGGGCCATGTCAGCTG...TATATATATGTTAGGTTTTGCTCTAGGGACCACCGCAGTGGCCCTCCAGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GCTATGCTCTGTGAAGCAAGTCACAGACTCACCCACATCTGCAGAGAAACCCAGGCTCACAGTGCATCTTaGCACAGCACGGGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AMLCEASHRLTHICRETQAHSAS*HSTGWQ Trigger: CTGCCACCCCGTGCTGTGCCAAGATGCACTGTGAGC...CTGGGTTTCTCTGCAGATGTGGGTGAGTCTGTGACTTGCTTCACAGAGCATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | TACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTTCTCCACCCTCAGGCTaGCTGACCATGGGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YSTYTAWWVLHTSATQAGSPPSG*LTMGKG Trigger: CCCCTTCCCCATGGTCAGCCAGCCTGAGGGTGGAGA...ACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CAA 72 bp | CCGTTAGTGAAAGGAGCTGAAACAGCCTGGTGGTCCTaGGCTACCCACCTGAGGGATGGGTACAGAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVKGAETAWWS*ATHLRDGYRML Trigger: CAGCATTCTGTACCCATCCCTCAGGTGGGTAGCCAAGGACCACCAGGCTGTTTCAGCTCCTTTCACTAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCCCATACTGGTCTTCCTTGTCAAGACTGAGAAACACACACATGAATGCTTTCCCAGGGCATGGTaGGTCCTGCAGGCAGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASPILVFLVKTEKHTHECFPRAW*VLQAGR Trigger: ACGGCCTGCCTGCAGGACTCACCATGCCCTGGGAAA...GCATTCATGTGTGTGTTTCTCAGTCTTGACAAGGAAGACCAGTATGGGAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR GCA 90 bp | GAGCTCTGGAGGGCCACTGCGGTGGTCCCTAGAGCAAAACCTAACATATATATATGGCCCTGGGCAGCCTaGAGGTTGGTCATCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELWRATAVVPRAKPNIYIWPWAA*RLVILQ Trigger: CTGCAAGATGACCAACCTGCAGGCTGCCCAGGGCCA...TATATATATGTTAGGTTTTGCTCTAGGGACCACCGCAGTGGCCCTCCAGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | TACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTATGCAGGAACTCCCCTaGGTACTGGGGCAGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSTYTAWWVLHTSATQAGMQELP*VLGQGE Trigger: CTCTCCCTGCCCCAGTACCCAGGGGAGTTCCTGCAT...ACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GAATGCTGCTTTAAGGGATATCACAGAGGAGCTTATGAATATCAGCTCTGCCTGCGCCGGGCTTGGTGGTaGAGGTGTCTCCCCGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ECCFKGYHRGAYEYQLCLRRAWW*RCLPGK Trigger: CTTCCCGGGGAGACACCTCCACCACCAAGCCCGGCG...CAGGCAGAGCTGATATTCATAAGCTCCTCTGTGATATCCCTTAAAGCAGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | TACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTGGGCAGCCTGCAGGTTaGTCATCTTGCAGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSTYTAWWVLHTSATQAGGQPAG*SSCSGW Trigger: CCAGCCACTGCAAGATGACCAACCTGCAGGCTGCCC...ACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCCCATACTGGTCTTCCTTGTCAAGACTGAGAAACACACACATGAATGCGACAGACAGCTGACATaGCCCTGGGCAGCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASPILVFLVKTEKHTHECDRQLT*PWAACR Trigger: CCTGCAGGCTGCCCAGGGCCATGTCAGCTGTCTGTC...GCATTCATGTGTGTGTTTCTCAGTCTTGACAAGGAAGACCAGTATGGGAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GTATCTACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGTCCTCCTCAGCCATGTaGATGTGGGCCGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSTVRTQHGGFCTHQLHKSSSAM*MWAASS Trigger: GGAGGAGGCGGCCCACATCCACATGGCTGAGGAGGA...CTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTAGATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR GCA 90 bp | ACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTAGCAGCTGCACGTAGGTaGAGAGGAAGTACACGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVRTQHGGFCTHQLHKQVAAARR*RGSTRR Trigger: CCTGCGTGTACTTCCTCTGCACCTACGTGCAGCTGC...TACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR GCA 90 bp | GTATCTACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGTGCTCGTTCTGCAGCTaGGAGGCAGCCAGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VSTVRTQHGGFCTHQLHKCSFCS*EAARAS Trigger: TGATGCCCTGGCTGCCTCGCAGCTGCAGAACGAGCA...CTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTAGATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCGGTGGTCCCTAGAGCAAAACCTAACATATATATACCAAAGGCAAGAACACCAGGGCATCACAGGTaGGTGGGGTCCCGGGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAVVPRAKPNIYIPKARTPGHHR*VGSRDG Trigger: TCCGTCCCGGGACCCCACCCACCTGTGATGCCCTGG...TGTTCTTGCCTTTGGTATATATATGTTAGGTTTTGCTCTAGGGACCACCGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR TCA 90 bp | ACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTAGATGGCCAAAACCTCTaGGTTTCCCAGGGCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVRTQHGGFCTHQLHKQVDGQNL*VSQGMV Trigger: CACCATGCCCTGGGAAACTCAGAGGTTTTGGCCATC...TACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR GCA 90 bp | ACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTAGCATACACCACAGGATaGAGGAACTCCCCTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TVRTQHGGFCTHQLHKQVAYTTG*RNSPGY Trigger: GTACCCAGGGGAGTTCCTGCATCCTGTGGTGTATGC...TACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR GCA 90 bp | GAATGCTGCTTTAAGGGATATCACAGAGGAGCTTATGAATATCAGCTCTGCCTGCAGGACCACCAGCACTaGCACACGTCCTCCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ECCFKGYHRGAYEYQLCLQDHQH*HTSSRL Trigger: CAAGCGGGAGGACGTGTGGCAGTGCTGGTGGTCCTG...CAGGCAGAGCTGATATTCATAAGCTCCTCTGTGATATCCCTTAAAGCAGCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR GCA 90 bp | GCTTGGGGACTAGTGGCGGTTGTATGTGGCCCAGTGTTCTTCCCATGGGTTCTTTCCTCCTCCATTAACTaGTCACAGTGCATCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AWGLVAVVCGPVFFPWVLSSSIN*SQCILA Trigger: TGCCAAGATGCACTGTGAGCAGTTAATGGAGGAGGA...AAGAACCCATGGGAAGAACACTGGGCCACATACAACCGCCACTAGTCCCCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR GCA 90 bp | TACCCACCTGAGGGATGGGTACAGAATGCTGCTTTAAGGGATATCACAGAGGAGTCCCTGTCCCATCAGTaGCAAATGGCAGGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YPPEGWVQNAALRDITEESLSHQ*QMAGLL Trigger: GAGAAGGCCTGCCATTTGGCACTGATGGGACAGGGA...CTCCTCTGTGATATCCCTTAAAGCAGCATTCTGTACCCATCCCTCAGGTGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GTATCTACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGTGTGTGCATCCCCATTaGGCCCTCCAGAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSTVRTQHGGFCTHQLHKCVHPH*ALQRAG Trigger: ACCAGCTCTCTGGAGGGCCCAATGGGGATGCACACA...CTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTAGATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | ACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGCAGGTATCTCGAACATCACCCTaGAGCAGCCCATTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVRTQHGGFCTHQLHKQVSRTSP*SSPFWL Trigger: CAGCCAGAATGGGCTGCTCCAGGGTGATGTTCGAGA...TACCTGCTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCCCATACTGGTCTTCCTTGTCAAGACTGAGAAACACACACATGAATGCTTGGTCATCTTGCAGTaGCTGGCTGGTGGATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASPILVFLVKTEKHTHECLVILQ*LAGGWP Trigger: TGGCCATCCACCAGCCAGCCACTGCAAGATGACCAA...GCATTCATGTGTGTGTTTCTCAGTCTTGACAAGGAAGACCAGTATGGGAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR TCA 90 bp | CACCCACATCTGCAGAGAAACCCAGCACTCAGGGCTGTGATACACACTAATTGTTCCCGCTTGGCGCAGTaGTGGATAAGTACAAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HPHLQRNPALRAVIHTNCSRLAQ*WISTKS Trigger: ACTCTTTGTACTTATCCATCACTGCGCCAAGCGGGA...ACAATTAGTGTGTATCACAGCCCTGAGTGCTGGGTTTCTCTGCAGATGTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GAGCTCTGGAGGGCCACTGCGGTGGTCCCTAGAGCAAAACCTAACATATATATATCCGGCTTATCCGGATaGCACTCTGATGCAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ELWRATAVVPRAKPNIYISGLSG*HSDARC Trigger: ACATCTTGCATCAGAGTGCCATCCGGATAAGCCGGA...TATATATATGTTAGGTTTTGCTCTAGGGACCACCGCAGTGGCCCTCCAGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCCCATACTGGTCTTCCTTGTCAAGACTGAGAAACACACACATGAATGCAAGGTCAGAGCGGCGTaGAAGCAGAAGTTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASPILVFLVKTEKHTHECKVRAA*KQKLRS Trigger: ACTCCTCAACTTCTGCTTCCACGCCGCTCTGACCTT...GCATTCATGTGTGTGTTTCTCAGTCTTGACAAGGAAGACCAGTATGGGAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCCCATACTGGTCTTCCTTGTCAAGACTGAGAAACACACACATGAATGCCCCATCAGTGCCAAATaGCAGGCCTTCTCGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: ASPILVFLVKTEKHTHECPISAK*QAFSNI Trigger: GATGTTCGAGAAGGCCTGCCATTTGGCACTGATGGG...GCATTCATGTGTGTGTTTCTCAGTCTTGACAAGGAAGACCAGTATGGGAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CAA 72 bp | AACCCAGCACTCAGGGCTGTGATACACACTAATTGTTaGTGGGTGCGTGTGAACACCAATGCGTCTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NPALRAVIHTNC*WVRVNTNASVC Trigger: ACACACAGACGCATTGGTGTTCACACGCACCCACAAACAATTAGTGTGTATCACAGCCCTGAGTGCTGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCGGTGGTCCCTAGAGCAAAACCTAACATATATATACCAAAGGCAAGAACAGCAATGCCCACTGCTTaGCACAGGATGGGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAVVPRAKPNIYIPKARTAMPTA*HRMGCW Trigger: CCAACACCCCATCCTGTGCCAAGCAGTGGGCATTGC...TGTTCTTGCCTTTGGTATATATATGTTAGGTTTTGCTCTAGGGACCACCGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | TACCCACCTGAGGGATGGGTACAGAATGCTGCTTTAAGGGATATCACAGAGGAGATGGCAGGGCCTTCTTaGTCACCTGTTTGTAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: YPPEGWVQNAALRDITEEMAGPS*SPVCRC Trigger: ACATCTACAAACAGGTGACCAAGAAGGCCCTGCCAT...CTCCTCTGTGATATCCCTTAAAGCAGCATTCTGTACCCATCCCTCAGGTGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCGGTGGTCCCTAGAGCAAAACCTAACATATATATACCAAAGGCAAGAACAGTCTGCTCCAGGACATaGCAGGGCCTTCTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TAVVPRAKPNIYIPKARTVCSRT*QGLLGH Trigger: GTGACCAAGAAGGCCCTGCCATGTCCTGGAGCAGAC...TGTTCTTGCCTTTGGTATATATATGTTAGGTTTTGCTCTAGGGACCACCGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCGGTGGTCCCTAGAGCAAAACCTAACATATATATACCAAAGGCAAGAACAGACTGCCATCCAGGCTaGAGGGGATGTGGTAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TAVVPRAKPNIYIPKARTDCHPG*RGCGKH Trigger: ATGCTTACCACATCCCCTCCAGCCTGGATGGCAGTC...TGTTCTTGCCTTTGGTATATATATGTTAGGTTTTGCTCTAGGGACCACCGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| 3UTR CAA 72 bp | CAGCCAGGTTCAATATTTAATGCCGAATTTCTTTGGTaGAATGAAGAGGTGTCTCTGTTCTCCCAGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QPGSIFNAEFLW*NEEVSLFSQRH Trigger: GTGCCTCTGGGAGAACAGAGACACCTCTTCATTCAACCAAAGAAATTCGGCATTAAATATTGAACCTGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS GCA 90 bp | GGACGGACTCCGTGGCGATGGCCGCTCTCTGGCACAGCCAGTCGCTaGTGCTCCTCCGTGCGCTCTCTGAGCTCATACCTGCGCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRTPWRWPLSGTASR*CSSVRSLSSYLRSG Trigger: CCCGGAGCGCAGGTATGAGCTCAGAGAGCGCACGGAGGAGCAGCAGCGACTGGCTGTGCCAGAGAGCGGCCATCGCCACGGAGTCCGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS GCA 90 bp | CCTCTGAGTTTCCCAGGGCATGGTGAGTCCTGCAGGCAGGCCGTATaGCCCAGCGCATCCCCGTTGGCATCGAGTGTAGGATGGGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PLSFPGHGESCRQAV*PSASPLASSVGWAP Trigger: CGGCGCCCATCCTACACTCGATGCCAACGGGGATGCGCTGGGGCATACGGCCTGCCTGCAGGACTCACCATGCCCTGGGAAACTCAGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS TCA 90 bp | GGCAGCCATAGAGCCCAGGGCTTGTGTCTCCACCCTCAGGCTGGCTaGCCATGGGGAAGGGGTCAGCCTGGGCACAGCAGGCCAATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSHRAQGLCLHPQAG*PWGRGQPGHSRPMC Trigger: ACACATTGGCCTGCTGTGCCCAGGCTGACCCCTTCCCCATGGTCAGCCAGCCTGAGGGTGGAGACACAAGCCCTGGGCTCTATGGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS CCA 90 bp | AGCAGGCCAATGTGTGCATCCCCATTGGGCCCTCCAGAGAGCTGGTaGGGCTCTCCGAACGTGAACTGTGGGGACTGCCATCCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRPMCASPLGPPESW*GSPNVNCGDCHPGW Trigger: CCAGCCTGGATGGCAGTCCCCACAGTTCACGTTCGGAGAGCCCCACCAGCTCTCTGGAGGGCCCAATGGGGATGCACACATTGGCCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS TCA 90 bp | CAGCAGGACCACCAGCACTGCCACACGTCCTCCCGCTTGGCGCAGTaGTGGATAAGTACAAAGAGTCCCAGTGTCACGCAGAAGGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QQDHQHCHTSSRLAQ*WISTKSPSVTQKAP Trigger: CGGCGCCTTCTGCGTGACACTGGGACTCTTTGTACTTATCCATCACTGCGCCAAGCGGGAGGACGTGTGGCAGTGCTGGTGGTCCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS GCA 90 bp | AGGAGACACAGGAGCATGACCGCGGTGCAGGCATACACCACAGGATaGAGGAACTCCCCTGGGTACTGGGGCAGGGAGAGGACAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRHRSMTAVQAYTTG*RNSPGYWGRERTVF Trigger: GAAGACTGTCCTCTCCCTGCCCCAGTACCCAGGGGAGTTCCTGCATCCTGTGGTGTATGCCTGCACCGCGGTCATGCTCCTGTGTCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CAA 90 bp | CGTGATGACCGTCACACCCCACTCAGCCCCTCCTTGTGGGACGGAGAATCTGACGCACAGGATGGGGTGTaGGGTGCGATTGATGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RDDRHTPLSPSLWDGESDAQDGV*GAIDAT Trigger: GGTGGCATCAATCGCACCCAACACCCCATCCTGTGC...GTCAGATTCTCCGTCCCACAAGGAGGGGCTGAGTGGGGTGTGACGGTCATCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS TCA 90 bp | GGTTGGTCATCTTGCAGTGGCTGGCTGGTGGATGGCCAAAACCTCTaGGTTTCCCAGGGCATGGTGAGTCCTGCAGGCAGGCCGTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: GWSSCSGWLVDGQNL*VSQGMVSPAGRPYA Trigger: GGCATACGGCCTGCCTGCAGGACTCACCATGCCCTGGGAAACTCAGAGGTTTTGGCCATCCACCAGCCAGCCACTGCAAGATGACCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS GCA 90 bp | TCCTCCTCAGCCATGTGGATGTGGGCCGCCTCCTCCTCCATTAACTaGTCACAGTGCATCTTGGCACAGCACGGGGTGGCAGGTGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSAMWMWAASSSIN*SQCILAQHGVAGDR Trigger: TCTGTCACCTGCCACCCCGTGCTGTGCCAAGATGCACTGTGAGCAGTTAATGGAGGAGGAGGCGGCCCACATCCACATGGCTGAGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS GCA 90 bp | CAGGCTGGAGGGGATGTGGTAAGCATACTCCCTCTCAGCCGCAGCTaGCTGGTGCCGGCTGAAGTAGTGGGACTTAGTTCTGCCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QAGGDVVSILPLSRS*LVPAEVVGLSSALE Trigger: CTCAAGGGCAGAACTAAGTCCCACTACTTCAGCCGGCACCAGGCAGCTGCGGCTGAGAGGGAGTATGCTTACCACATCCCCTCCAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS CCA 90 bp | TCCGCTGATGAGGTAGAACCTGAGCAAGGGCTGCTTAGGGTACGGTaGCTGGTCTGCTCCAGGACATGGCAGGGCCTTCTTGGTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SADEVEPEQGLLRVR*LVCSRTWQGLLGHL Trigger: CAGGTGACCAAGAAGGCCCTGCCATGTCCTGGAGCAGACCAGCCACCGTACCCTAAGCAGCCCTTGCTCAGGTTCTACCTCATCAGCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS CCA 90 bp | ATGGCAGGCCTTCTCGAACATCACCCTGGAGCAGCCCATTCTGGCTaGGGCCCCCAAAAGGCAGGGACTGTGTCCTTCGTAGCATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MAGLLEHHPGAAHSG*GPQKAGTVSFVASP Trigger: TGGAGATGCTACGAAGGACACAGTCCCTGCCTTTTGGGGGCCCCAGCCAGAATGGGCTGCTCCAGGGTGATGTTCGAGAAGGCCTGCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS TCA 90 bp | GTACAAAGAGTCCCAGTGTCACGCAGAAGGCGCCGTACAGACAGCTaGAGATCATGTCCAGGAAGTGGCCCTGAGACACAGCCAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VQRVPVSRRRRRTDS*RSCPGSGPETQPGP Trigger: GGGCCCTGGCTGTGTCTCAGGGCCACTTCCTGGACATGATCTTCAGCTGTCTGTACGGCGCCTTCTGCGTGACACTGGGACTCTTTGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS-3UTR CAA 90 bp | GCACGTGCATACATGTGGTGGGCAAGCGTGTGGATGCACGTGTATGTGGTGTGCATGTGTGCATCCCCATaGGGCCCTCCAGAGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARAYMWWASVWMHVYVVCMCASP*GPPESW Trigger: CCAGCTCTCTGGAGGGCCCAATGGGGATGCACACAT...GCACACCACATACACGTGCATCCACACGCTTGCCCACCACATGTATGCACGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS TCA 90 bp | CATGTAGCTGTGAACAGGAACAGTGTGAAGGCAGCGGCACGAAGCTaGGCCTTGAAGGAATGCTCGTTCTGCAGCTGCGAGGCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HVAVNRNSVKAAARS*ALKECSFCSCEAAR Trigger: CCTGGCTGCCTCGCAGCTGCAGAACGAGCATTCCTTCAAGGCTCAGCTTCGTGCCGCTGCCTTCACACTGTTCCTGTTCACAGCTACATG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS GCA 90 bp | AAACACGGTGAAGGTCAGAGCGGCGTGGAAGCAGAAGTTGAGGAGTaGGTGCCGGCCTTTCCGGCTTATCCGGATGGCACTCTGATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KHGEGQSGVEAEVEE*VPAFPAYPDGTLMQ Trigger: TTGCATCAGAGTGCCATCCGGATAAGCCGGAAAGGCCGGCACGCACTCCTCAACTTCTGCTTCCACGCCGCTCTGACCTTCACCGTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS GCA 90 bp | GAGGTAGAACCTGAGCAAGGGCTGCTTAGGGTACGGTGGCTGGTCTaGTCCAGGACATGGCAGGGCCTTCTTGGTCACCTGTTTGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EVEPEQGLLRVRWLV*SRTWQGLLGHLFVD Trigger: ATCTACAAACAGGTGACCAAGAAGGCCCTGCCATGTCCTGGAGCAGACCAGCCACCGTACCCTAAGCAGCCCTTGCTCAGGTTCTACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
||
| CDS CCA 90 bp | GAGCAAGGGCTGCTTAGGGTACGGTGGCTGGTCTGCTCCAGGACATaGCAGGGCCTTCTTGGTCACCTGTTTGTAGATGTTCCTAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EQGLLRVRWLVCSRT*QGLLGHLFVDVPSS Trigger: ACTGCTAGGAACATCTACAAACAGGTGACCAAGAAGGCCCTGCCATGTCCTGGAGCAGACCAGCCACCGTACCCTAAGCAGCCCTTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CCA 90 bp | TTTCCAGGGTCCTGTTCGGATGTTCCCTGTCCCATCAGTGCCAAATaGCAGGCCTTCTCGAACATCACCCTGGAGCAGCCCATTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: FPGSCSDVPCPISAK*QAFSNITLEQPILA Trigger: AGCCAGAATGGGCTGCTCCAGGGTGATGTTCGAGAAGGCCTGCCATTTGGCACTGATGGGACAGGGAACATCCGAACAGGACCCTGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS GCA 90 bp | TTTCATTTTTCCAGGGTCCTGTTCGGATGTTCCCTGTCCCATCAGTaGCAAATGGCAGGCCTTCTCGAACATCACCCTGGAGCAGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: FHFSRVLFGCSLSHQ*QMAGLLEHHPGAAH Trigger: ATGGGCTGCTCCAGGGTGATGTTCGAGAAGGCCTGCCATTTGGCACTGATGGGACAGGGAACATCCGAACAGGACCCTGGAAAAATGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS-3UTR CAA 90 bp | GTATCTACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGTGGGCAGCCTGCAGGTaGGTCATCTTGCAGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: VSTVRTQHGGFCTHQLHKWAACR*VILQWL Trigger: CAGCCACTGCAAGATGACCAACCTGCAGGCTGCCCA...CTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTAGATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS-3UTR CAA 90 bp | GTATCTACAGTACGTACACAGCATGGTGGGTTCTGCACACATCAGCTACACAAGAGCAATGCCCACTGCTaGGCACAGGATGGGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: VSTVRTQHGGFCTHQLHKSNAHC*AQDGVL Trigger: CAACACCCCATCCTGTGCCAAGCAGTGGGCATTGCT...CTTGTGTAGCTGATGTGTGCAGAACCCACCATGCTGTGTACGTACTGTAGATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS-3UTR CAA 90 bp | GAATGCTGCTTTAAGGGATATCACAGAGGAGCTTATGAATATCAGCTCTGCCTGTGCTCACAGTGCATCTaGGCACAGCACGGGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: ECCFKGYHRGAYEYQLCLCSQCI*AQHGVA Trigger: TGCCACCCCGTGCTGTGCCAAGATGCACTGTGAGCA...CAGGCAGAGCTGATATTCATAAGCTCCTCTGTGATATCCCTTAAAGCAGCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS-3UTR CAA 90 bp | GAATGCTGCTTTAAGGGATATCACAGAGGAGCTTATGAATATCAGCTCTGCCTGCATAGAGCCCAGGGCTaGTGTCTCCACCCTCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: ECCFKGYHRGAYEYQLCLHRAQG*CLHPQA Trigger: AGCCTGAGGGTGGAGACACAAGCCCTGGGCTCTATG...CAGGCAGAGCTGATATTCATAAGCTCCTCTGTGATATCCCTTAAAGCAGCATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS-3UTR CAA 90 bp | ACTGCGGTGGTCCCTAGAGCAAAACCTAACATATATATACCAAAGGCAAGAACATGCAGGTTGGTCATCTaGCAGTGGCTGGCTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: TAVVPRAKPNIYIPKARTCRLVI*QWLAGG Trigger: TCCACCAGCCAGCCACTGCAAGATGACCAACCTGCA...TGTTCTTGCCTTTGGTATATATATGTTAGGTTTTGCTCTAGGGACCACCGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CCA 72 bp | CAGGTGGGTGGGGTCCCGGGACGGACTCCGTGGCGATaGCCGCTCTCTGGCACAGCCAGTCGCTGCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QVGGVPGRTPWR*PLSGTASRCCS Trigger: GGAGCAGCAGCGACTGGCTGTGCCAGAGAGCGGCCATCGCCACGGAGTCCGTCCCGGGACCCCACCCACCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CCA 72 bp | CTGCAGCTGCGAGGCAGCCAGGGCATCACAGGTGGGTaGGGTCCCGGGACGGACTCCGTGGCGATGGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: LQLRGSQGITGG*GPGTDSVAMAA Trigger: AGCGGCCATCGCCACGGAGTCCGTCCCGGGACCCCACCCACCTGTGATGCCCTGGCTGCCTCGCAGCTGCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CAA 90 bp | CCCAGCGCATCCCCGTTGGCATCGAGTGTAGGATGGGCGCCGGGCTaGGTGGTGGAGGTGTCTCCCCGGGAAGGGCAGCAGGACCACCAG | + |
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Preference number: 6 (lower is better) Translates to: PSASPLASSVGWAPG*VVEVSPREGQQDHQ Trigger: CTGGTGGTCCTGCTGCCCTTCCCGGGGAGACACCTCCACCACCAAGCCCGGCGCCCATCCTACACTCGATGCCAACGGGGATGCGCTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS TCA 72 bp | GCACAGCCAGTCGCTGCTGCTCCTCCGTGCGCTCTCTaGGCTCATACCTGCGCTCCGGGTGACGCCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AQPVAAAPPCAL*AHTCAPGDAAA Trigger: AGCTGCGGCGTCACCCGGAGCGCAGGTATGAGCTCAGAGAGCGCACGGAGGAGCAGCAGCGACTGGCTGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CAA 72 bp | TCCTGCAGGCAGGCCGTATGCCCCAGCGCATCCCCGTaGGCATCGAGTGTAGGATGGGCGCCGGGCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SCRQAVCPSASP*ASSVGWAPGLV Trigger: CACCAAGCCCGGCGCCCATCCTACACTCGATGCCAACGGGGATGCGCTGGGGCATACGGCCTGCCTGCAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CAA 90 bp | CATGGTGAGTCCTGCAGGCAGGCCGTATGCCCCAGCGCATCCCCGTaGGCATCGAGTGTAGGATGGGCGCCGGGCTTGGTGGTGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: HGESCRQAVCPSASP*ASSVGWAPGLVVEV Trigger: CACCTCCACCACCAAGCCCGGCGCCCATCCTACACTCGATGCCAACGGGGATGCGCTGGGGCATACGGCCTGCCTGCAGGACTCACCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS GCA 72 bp | CCGTGGCGATGGCCGCTCTCTGGCACAGCCAGTCGCTaGTGCTCCTCCGTGCGCTCTCTGAGCTCATACCTG | + |
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Preference number: 6 (lower is better) Translates to: PWRWPLSGTASR*CSSVRSLSSYL Trigger: CAGGTATGAGCTCAGAGAGCGCACGGAGGAGCAGCAGCGACTGGCTGTGCCAGAGAGCGGCCATCGCCACGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS GCA 72 bp | GGGAAGGGGTCAGCCTGGGCACAGCAGGCCAATGTGTaGATCCCCATTGGGCCCTCCAGAGAGCTGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GKGSAWAQQANV*IPIGPSRELVG Trigger: CCCCACCAGCTCTCTGGAGGGCCCAATGGGGATGCACACATTGGCCTGCTGTGCCCAGGCTGACCCCTTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CCA 72 bp | AGCCTGGGCACAGCAGGCCAATGTGTGCATCCCCATTaGGCCCTCCAGAGAGCTGGTGGGGCTCTCCGAACG | + |
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Preference number: 6 (lower is better) Translates to: SLGTAGQCVHPH*ALQRAGGALRT Trigger: CGTTCGGAGAGCCCCACCAGCTCTCTGGAGGGCCCAATGGGGATGCACACATTGGCCTGCTGTGCCCAGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CAA 90 bp | CCACCAGCAAACACGGTGAAGGTCAGAGCGGCGTGGAAGCAGAAGTaGAGGAGTGCGTGCCGGCCTTTCCGGCTTATCCGGATGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: PPANTVKVRAAWKQK*RSACRPFRLIRMAL Trigger: GAGTGCCATCCGGATAAGCCGGAAAGGCCGGCACGCACTCCTCAACTTCTGCTTCCACGCCGCTCTGACCTTCACCGTGTTTGCTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS TCA 72 bp | TGGATGGCCAAAACCTCTGAGTTTCCCAGGGCATGGTaGGTCCTGCAGGCAGGCCGTATGCCCCAGCGCATC | + |
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Preference number: 6 (lower is better) Translates to: WMAKTSEFPRAW*VLQAGRMPQRI Trigger: GATGCGCTGGGGCATACGGCCTGCCTGCAGGACTCACCATGCCCTGGGAAACTCAGAGGTTTTGGCCATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS GCA 72 bp | GAAGGTCAGAGCGGCGTGGAAGCAGAAGTTGAGGAGTaGGTGCCGGCCTTTCCGGCTTATCCGGATGGCACT | + |
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Preference number: 6 (lower is better) Translates to: EGQSGVEAEVEE*VPAFPAYPDGT Trigger: AGTGCCATCCGGATAAGCCGGAAAGGCCGGCACGCACTCCTCAACTTCTGCTTCCACGCCGCTCTGACCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CAA 72 bp | GCCGCCTCCTCCTCCATTAACTGCTCACAGTGCATCTaGGCACAGCACGGGGTGGCAGGTGACAGACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: AASSSINCSQCI*AQHGVAGDRQL Trigger: CAGCTGTCTGTCACCTGCCACCCCGTGCTGTGCCAAGATGCACTGTGAGCAGTTAATGGAGGAGGAGGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS TCA 72 bp | TCTTGCAGTGGCTGGCTGGTGGATGGCCAAAACCTCTaGGTTTCCCAGGGCATGGTGAGTCCTGCAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SCSGWLVDGQNL*VSQGMVSPAGR Trigger: CCTGCCTGCAGGACTCACCATGCCCTGGGAAACTCAGAGGTTTTGGCCATCCACCAGCCAGCCACTGCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS GCA 72 bp | ATGTGGGCCGCCTCCTCCTCCATTAACTGCTCACAGTaGATCTTGGCACAGCACGGGGTGGCAGGTGACAGA | + |
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Preference number: 6 (lower is better) Translates to: MWAASSSINCSQ*ILAQHGVAGDR Trigger: TCTGTCACCTGCCACCCCGTGCTGTGCCAAGATGCACTGTGAGCAGTTAATGGAGGAGGAGGCGGCCCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CCA 72 bp | GAGGTAGAACCTGAGCAAGGGCTGCTTAGGGTACGGTaGCTGGTCTGCTCCAGGACATGGCAGGGCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: EVEPEQGLLRVR*LVCSRTWQGLL Trigger: AAGAAGGCCCTGCCATGTCCTGGAGCAGACCAGCCACCGTACCCTAAGCAGCCCTTGCTCAGGTTCTACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CCA 72 bp | GGCAGCCTGCAGGTTGGTCATCTTGCAGTGGCTGGCTaGTGGATGGCCAAAACCTCTGAGTTTCCCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GSLQVGHLAVAG*WMAKTSEFPRA Trigger: TGCCCTGGGAAACTCAGAGGTTTTGGCCATCCACCAGCCAGCCACTGCAAGATGACCAACCTGCAGGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CCA 72 bp | TCTCCGAACGTGAACTGTGGGGACTGCCATCCAGGCTaGAGGGGATGTGGTAAGCATACTCCCTCTCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SPNVNCGDCHPG*RGCGKHTPSQP Trigger: CGGCTGAGAGGGAGTATGCTTACCACATCCCCTCCAGCCTGGATGGCAGTCCCCACAGTTCACGTTCGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CAA 72 bp | CCCACTGCTTGGCACAGGATGGGGTGTTGGGTGCGATaGATGCCACCAGCAAACACGGTGAAGGTCAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: PTAWHRMGCWVR*MPPANTVKVRA Trigger: CGCTCTGACCTTCACCGTGTTTGCTGGTGGCATCAATCGCACCCAACACCCCATCCTGTGCCAAGCAGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CAA 90 bp | AGAGCAATGCCCACTGCTTGGCACAGGATGGGGTGTTGGGTGCGATaGATGCCACCAGCAAACACGGTGAAGGTCAGAGCGGCGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RAMPTAWHRMGCWVR*MPPANTVKVRAAWK Trigger: CTTCCACGCCGCTCTGACCTTCACCGTGTTTGCTGGTGGCATCAATCGCACCCAACACCCCATCCTGTGCCAAGCAGTGGGCATTGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS GCA 72 bp | CGCACCCAGGCTGGGTTCCCAGGCCATCCAGCAGTATaGCACGTCCTCATCCTCGGTGCCATAATTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: RTQAGFPGHPAV*HVLILGAIISD Trigger: ATCAGAAATTATGGCACCGAGGATGAGGACGTGGCATACTGCTGGATGGCCTGGGAACCCAGCCTGGGTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS GCA 72 bp | GGGGATGTGGTAAGCATACTCCCTCTCAGCCGCAGCTaGCTGGTGCCGGCTGAAGTAGTGGGACTTAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: GDVVSILPLSRS*LVPAEVVGLSS Trigger: AGAACTAAGTCCCACTACTTCAGCCGGCACCAGGCAGCTGCGGCTGAGAGGGAGTATGCTTACCACATCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CCA 72 bp | TCCTGTTCGGATGTTCCCTGTCCCATCAGTGCCAAATaGCAGGCCTTCTCGAACATCACCCTGGAGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SCSDVPCPISAK*QAFSNITLEQP Trigger: GGGCTGCTCCAGGGTGATGTTCGAGAAGGCCTGCCATTTGGCACTGATGGGACAGGGAACATCCGAACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS TCA 72 bp | GTGAACAGGAACAGTGTGAAGGCAGCGGCACGAAGCTaGGCCTTGAAGGAATGCTCGTTCTGCAGCTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: VNRNSVKAAARS*ALKECSFCSCE Trigger: CTCGCAGCTGCAGAACGAGCATTCCTTCAAGGCTCAGCTTCGTGCCGCTGCCTTCACACTGTTCCTGTTCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS GCA 72 bp | TCCAGGGTCCTGTTCGGATGTTCCCTGTCCCATCAGTaGCAAATGGCAGGCCTTCTCGAACATCACCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SRVLFGCSLSHQ*QMAGLLEHHPG Trigger: TCCAGGGTGATGTTCGAGAAGGCCTGCCATTTGGCACTGATGGGACAGGGAACATCCGAACAGGACCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CCA 72 bp | AGAGCAATGCCCACTGCTTGGCACAGGATGGGGTGTTaGGTGCGATTGATGCCACCAGCAAACACGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: RAMPTAWHRMGC*VRLMPPANTVK Trigger: CTTCACCGTGTTTGCTGGTGGCATCAATCGCACCCAACACCCCATCCTGTGCCAAGCAGTGGGCATTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CCA 72 bp | TGCAGGTTGGTCATCTTGCAGTGGCTGGCTGGTGGATaGCCAAAACCTCTGAGTTTCCCAGGGCATGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: CRLVILQWLAGG*PKPLSFPGHGE Trigger: CTCACCATGCCCTGGGAAACTCAGAGGTTTTGGCCATCCACCAGCCAGCCACTGCAAGATGACCAACCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS CAA 72 bp | AGAAAGCGTGGAATAGTGCAGAGCAATGCCCACTGCTaGGCACAGGATGGGGTGTTGGGTGCGATTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: RKRGIVQSNAHC*AQDGVLGAIDA Trigger: GGCATCAATCGCACCCAACACCCCATCCTGTGCCAAGCAGTGGGCATTGCTCTGCACTATTCCACGCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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| CDS GCA 72 bp | GGTAGAAAGCGTGGAATAGTGCAGAGCAATGCCCACTaGTTGGCACAGGATGGGGTGTTGGGTGCGATTGAT | + |
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Preference number: 6 (lower is better) Translates to: GRKRGIVQSNAH*LAQDGVLGAID Trigger: ATCAATCGCACCCAACACCCCATCCTGTGCCAAGCAGTGGGCATTGCTCTGCACTATTCCACGCTTTCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026548.14 |
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