RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCYAP1R1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029778

Ensembl transcript IDs: ENSMUST00000070736.12, ENSMUST00000070756.12, ENSMUST00000165786.2, ENSMUST00000165857.8, ENSMUST00000166962.8, ENSMUST00000167234.8, ENSMUST00000172084.8

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACAAGGCCTTGTACCTGGGATCAGGCCATCACCGAGGCTGGCCTTaGCCCAGTAGGTCAAGCTGGGACCTGGCAGAGGTGAGCAGGGGC +
Preference number: 1 (lower is better)
Translates to: HKALYLGSGHHRGWP*PSRSSWDLAEVSRG
Trigger: GCCCCTGCTCACCTCTGCCAGGTCCCAGCTTGACCTACTGGGTCAAGGCCAGCCTCGGTGATGGCCTGATCCCAGGTACAAGGCCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR GCA 90 bp TCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGGCCTaGCCAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCC +
Preference number: 1 (lower is better)
Translates to: SLFPFEEEPSFLPRA*PRRGERHKHAQALA
Trigger: GGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTGGGCAGGCCCTGGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR CCA 90 bp ATCCTTAGACCAGGCCAACTCAGCTGCTTCTCCTGCACTGTACTGTaGACCCCTGGGCTTTCTGCAGGTACAGCCACTCCTGCAAAAGGA +
Preference number: 1 (lower is better)
Translates to: ILRPGQLSCFSCTVL*TPGLSAGTATPAKG
Trigger: TCCTTTTGCAGGAGTGGCTGTACCTGCAGAAAGCCCAGGGGTCCACAGTACAGTGCAGGAGAAGCAGCTGAGTTGGCCTGGTCTAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR TCA 90 bp CTGGAACCACATCTGGAGTACCAAGGGCTGAACCAACCCCAGCCCTaGCAGATGCTAAGCCTCAGAAGACAGACAGCAGACAAAACACAC +
Preference number: 1 (lower is better)
Translates to: LEPHLEYQGLNQPQP*QMLSLRRQTADKTH
Trigger: GTGTGTTTTGTCTGCTGTCTGTCTTCTGAGGCTTAGCATCTGTCAGGGCTGGGGTTGGTTCAGCCCTTGGTACTCCAGATGTGGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 90 bp GCACTATGTAAGAAGGTCAATAGGGAAGGGATTTATCCAGCCTTGTaGTGCCCCATCACTGCCTACAGCCTGAGAGCCAGACCCTCATGG +
Preference number: 1 (lower is better)
Translates to: ALCKKVNREGIYPAL*CPITAYSLRARPSW
Trigger: CCATGAGGGTCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAAGGCTGGATAAATCCCTTCCCTATTGACCTTCTTACATAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 90 bp CCCCTGGGCTTTCTGCAGGTACAGCCACTCCTGCAAAAGGAACATTaGATTTCACAGCTGCTTGGAGTGTTACATCTGGCTCACACGCAG +
Preference number: 1 (lower is better)
Translates to: PLGFLQVQPLLQKEH*ISQLLGVLHLAHTQ
Trigger: CTGCGTGTGAGCCAGATGTAACACTCCAAGCAGCTGTGAAATGCAATGTTCCTTTTGCAGGAGTGGCTGTACCTGCAGAAAGCCCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 90 bp ACTCAGCTGCTTCTCCTGCACTGTACTGTGGACCCCTGGGCTTTCTaGAGGTACAGCCACTCCTGCAAAAGGAACATTGCATTTCACAGC +
Preference number: 1 (lower is better)
Translates to: TQLLLLHCTVDPWAF*RYSHSCKRNIAFHS
Trigger: GCTGTGAAATGCAATGTTCCTTTTGCAGGAGTGGCTGTACCTGCAGAAAGCCCAGGGGTCCACAGTACAGTGCAGGAGAAGCAGCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 90 bp TCCAAAGCAGGCATGTTTCAAACTCAGTTCACAAGGCCTTGTACCTaGGATCAGGCCATCACCGAGGCTGGCCTTGACCCAGTAGGTCAA +
Preference number: 1 (lower is better)
Translates to: SKAGMFQTQFTRPCT*DQAITEAGLDPVGQ
Trigger: TTGACCTACTGGGTCAAGGCCAGCCTCGGTGATGGCCTGATCCCAGGTACAAGGCCTTGTGAACTGAGTTTGAAACATGCCTGCTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 90 bp ACCTGGAGTTCAAGGAAGGGAGAAAGAACGGGCATTTGGCTCACTTaGGGAGTGTCCCATACCACTGAAGGATTCCTAGGCAGACAGCAC +
Preference number: 1 (lower is better)
Translates to: TWSSRKGERTGIWLT*GVSHTTEGFLGRQH
Trigger: GTGCTGTCTGCCTAGGAATCCTTCAGTGGTATGGGACACTCCTCAAGTGAGCCAAATGCCCGTTCTTTCTCCCTTCCTTGAACTCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 90 bp CTATGTAAGAAGGTCAATAGGGAAGGGATTTATCCAGCCTTGTGCTaGCCCATCACTGCCTACAGCCTGAGAGCCAGACCCTCATGGAAC +
Preference number: 1 (lower is better)
Translates to: LCKKVNREGIYPALC*PITAYSLRARPSWN
Trigger: GTTCCATGAGGGTCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAAGGCTGGATAAATCCCTTCCCTATTGACCTTCTTACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 90 bp TTGTGCTGCCCCATCACTGCCTACAGCCTGAGAGCCAGACCCTCATaGAACAGCAGAATCCTTCAGGTACATCTGCTCACAAGACTAAGA +
Preference number: 1 (lower is better)
Translates to: LCCPITAYSLRARPS*NSRILQVHLLTRLR
Trigger: TCTTAGTCTTGTGAGCAGATGTACCTGAAGGATTCTGCTGTTCCATGAGGGTCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 90 bp TGCAGGTACAGCCACTCCTGCAAAAGGAACATTGCATTTCACAGCTaGTTGGAGTGTTACATCTGGCTCACACGCAGGGCTGTGCAATAC +
Preference number: 1 (lower is better)
Translates to: CRYSHSCKRNIAFHS*LECYIWLTRRAVQY
Trigger: GTATTGCACAGCCCTGCGTGTGAGCCAGATGTAACACTCCAAGCAGCTGTGAAATGCAATGTTCCTTTTGCAGGAGTGGCTGTACCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 90 bp GCTATATTGCTGCAAGCCTTGCCTGGGGCCCATTCCAAGAGAAGATaGTTGGTGTTTAGACAGAACCCCAGAGGAACACTGGGATACACA +
Preference number: 1 (lower is better)
Translates to: AILLQALPGAHSKRR*LVFRQNPRGTLGYT
Trigger: TGTGTATCCCAGTGTTCCTCTGGGGTTCTGTCTAAACACCAACCATCTTCTCTTGGAATGGGCCCCAGGCAAGGCTTGCAGCAATATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR TCA 90 bp GGGGGAAAGAGCCAATGTATATACTCAGGGGTTGGTCCAAGCCACTaGATGTTTCTGGGAAAGAACAAGGAGGCCCTTTCTCTTTCCAGC +
Preference number: 1 (lower is better)
Translates to: GGKSQCIYSGVGPSH*MFLGKNKEALSLSS
Trigger: GCTGGAAAGAGAAAGGGCCTCCTTGTTCTTTCCCAGAAACATTCAGTGGCTTGGACCAACCCCTGAGTATATACATTGGCTCTTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 90 bp TTTCTGCACATCATGCCTGAGGCTCCCATTCAAATGTCCATGGCCTaGGGCATGATAGCTGCTCTACCAGCTTTGGATACCATGTGGCAT +
Preference number: 1 (lower is better)
Translates to: FLHIMPEAPIQMSMA*GMIAALPALDTMWH
Trigger: ATGCCACATGGTATCCAAAGCTGGTAGAGCAGCTATCATGCCTCAGGCCATGGACATTTGAATGGGAGCCTCAGGCATGATGTGCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 90 bp TGGGTGTGGCCTTATTTTAAAGTCTTAGGTTATGGCTGTGCAACTTaGAGCTGGAGAGCCAAGATGGGCACTAGAAAGCCACCACTCCCT +
Preference number: 1 (lower is better)
Translates to: WVWPYFKVLGYGCAT*SWRAKMGTRKPPLP
Trigger: AGGGAGTGGTGGCTTTCTAGTGCCCATCTTGGCTCTCCAGCTGCAAGTTGCACAGCCATAACCTAAGACTTTAAAATAAGGCCACACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 90 bp TTAAAAAGAGAGTCTCTTGTAGCTTTCCCTCCAAGGAAGAGAGAGTaGAGACCAAACAGCAGAGGCCCTGGTACTGGGCAACAGGTTCAG +
Preference number: 1 (lower is better)
Translates to: LKRESLVAFPPRKRE*RPNSRGPGTGQQVQ
Trigger: CTGAACCTGTTGCCCAGTACCAGGGCCTCTGCTGTTTGGTCTTCACTCTCTCTTCCTTGGAGGGAAAGCTACAAGAGACTCTCTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 90 bp TGTGGTTGTTGTGGCTGGAGAACAGCTTCTTCAGGCCATCCATGGTaGGCAAGAAGTGTAGAAATAAAGCCACCACATGATACGGTCTTG +
Preference number: 1 (lower is better)
Translates to: CGCCGWRTASSGHPW*ARSVEIKPPHDTVL
Trigger: CAAGACCGTATCATGTGGTGGCTTTATTTCTACACTTCTTGCCCACCATGGATGGCCTGAAGAAGCTGTTCTCCAGCCACAACAACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 90 bp TTCTGTGGTTGTTGTGGCTGGAGAACAGCTTCTTCAGGCCATCCATaGTGGGCAAGAAGTGTAGAAATAAAGCCACCACATGATACGGTC +
Preference number: 1 (lower is better)
Translates to: FCGCCGWRTASSGHP*WARSVEIKPPHDTV
Trigger: GACCGTATCATGTGGTGGCTTTATTTCTACACTTCTTGCCCACCATGGATGGCCTGAAGAAGCTGTTCTCCAGCCACAACAACCACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 90 bp TGGCCTTATTTTAAAGTCTTAGGTTATGGCTGTGCAACTTGCAGCTaGAGAGCCAAGATGGGCACTAGAAAGCCACCACTCCCTCTACCA +
Preference number: 1 (lower is better)
Translates to: WPYFKVLGYGCATCS*RAKMGTRKPPLPLP
Trigger: TGGTAGAGGGAGTGGTGGCTTTCTAGTGCCCATCTTGGCTCTCCAGCTGCAAGTTGCACAGCCATAACCTAAGACTTTAAAATAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 90 bp GGGGTGGGAGCACTGTGGAGTTCCCTGGACCCAAGACTTGGCTTATaGAAATTGAAGGTTGCTTCAGAACTCATTGATTTTACTGCAAGG +
Preference number: 1 (lower is better)
Translates to: GVGALWSSLDPRLGL*KLKVASELIDFTAR
Trigger: CCTTGCAGTAAAATCAATGAGTTCTGAAGCAACCTTCAATTTTCATAAGCCAAGTCTTGGGTCCAGGGAACTCCACAGTGCTCCCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 90 bp GCCAATGTATATACTCAGGGGTTGGTCCAAGCCACTGAATGTTTCTaGGAAAGAACAAGGAGGCCCTTTCTCTTTCCAGCTTTGCCAAAG +
Preference number: 1 (lower is better)
Translates to: ANVYTQGLVQATECF*ERTRRPFLFPALPK
Trigger: CTTTGGCAAAGCTGGAAAGAGAAAGGGCCTCCTTGTTCTTTCCCAGAAACATTCAGTGGCTTGGACCAACCCCTGAGTATATACATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 90 bp TGCAAAAGGAACATTGCATTTCACAGCTGCTTGGAGTGTTACATCTaGCTCACACGCAGGGCTGTGCAATACCGGTACAACTCAATGCAA +
Preference number: 1 (lower is better)
Translates to: CKRNIAFHSCLECYI*LTRRAVQYRYNSMQ
Trigger: TTGCATTGAGTTGTACCGGTATTGCACAGCCCTGCGTGTGAGCCAGATGTAACACTCCAAGCAGCTGTGAAATGCAATGTTCCTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 90 bp TCTGCTATGTTCCTGCCTCCAGGTTTCCAAATCCATGAAGCCCTTTaGACCTACCAGACAGAATTTCCTTATCGTTTTCCCTTTTCTGGG +
Preference number: 1 (lower is better)
Translates to: SAMFLPPGFQIHEAL*TYQTEFPYRFPFSG
Trigger: CCCAGAAAAGGGAAAACGATAAGGAAATTCTGTCTGGTAGGTGCAAAGGGCTTCATGGATTTGGAAACCTGGAGGCAGGAACATAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 90 bp TTCACAGCTGCTTGGAGTGTTACATCTGGCTCACACGCAGGGCTGTaGAATACCGGTACAACTCAATGCAATGCAATTCAAAAACAGACT +
Preference number: 1 (lower is better)
Translates to: FTAAWSVTSGSHAGL*NTGTTQCNAIQKQT
Trigger: AGTCTGTTTTTGAATTGCATTGCATTGAGTTGTACCGGTATTGCACAGCCCTGCGTGTGAGCCAGATGTAACACTCCAAGCAGCTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR TCA 90 bp GTTGCTCATAGAAGATTTCTCCTCATCCGTACCTTCGAAGAAAACTaGACAGTGATGACGGTAAAGCTGGGATTTGAAGTCCACCAGAGC +
Preference number: 1 (lower is better)
Translates to: VAHRRFLLIRTFEEN*TVMTVKLGFEVHQS
Trigger: GCTCTGGTGGACTTCAAATCCCAGCTTTACCGTCATCACTGTTCAGTTTTCTTCGAAGGTACGGATGAGGAGAAATCTTCTATGAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 90 bp AATGTTTCTGGGAAAGAACAAGGAGGCCCTTTCTCTTTCCAGCTTTaGCAAAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAAC +
Preference number: 1 (lower is better)
Translates to: NVSGKEQGGPFSFQL*QRPKSILHWSRTQN
Trigger: GTTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAAGAGAAAGGGCCTCCTTGTTCTTTCCCAGAAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR GCA 90 bp CCAAATGGGAAAATAAACAGGATGTCATCCCTCTTAATACACACATaGACGCACACACACACACACACACACACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: PNGKINRMSSLLIHT*THTHTHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCATGTGTGTATTAAGAGGGATGACATCCTGTTTATTTTCCCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 90 bp AGTTCTTCAGCTATCCCATCTCCTTCCAAATTGAATCTGCATTTCTaGCTCTCAGCTCTTAGAGCACAGGAAAAGCACCAGAACTTTCTC +
Preference number: 1 (lower is better)
Translates to: SSSAIPSPSKLNLHF*LSALRAQEKHQNFL
Trigger: GAGAAAGTTCTGGTGCTTTTCCTGTGCTCTAAGAGCTGAGAGCCAGAAATGCAGATTCAATTTGGAAGGAGATGGGATAGCTGAAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 90 bp CATGATAGCTGCTCTACCAGCTTTGGATACCATGTGGCATCCAAATaGGAAAATAAACAGGATGTCATCCCTCTTAATACACACATGCAC +
Preference number: 1 (lower is better)
Translates to: HDSCSTSFGYHVASK*ENKQDVIPLNTHMH
Trigger: GTGCATGTGTGTATTAAGAGGGATGACATCCTGTTTATTTTCCCATTTGGATGCCACATGGTATCCAAAGCTGGTAGAGCAGCTATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 90 bp AACCCCAGAGGAACACTGGGATACACACAGATCAATAAGTCTTATTaGTTGCACTATGTAAGAAGGTCAATAGGGAAGGGATTTATCCAG +
Preference number: 1 (lower is better)
Translates to: NPRGTLGYTQINKSY*LHYVRRSIGKGFIQ
Trigger: CTGGATAAATCCCTTCCCTATTGACCTTCTTACATAGTGCAAGCAATAAGACTTATTGATCTGTGTGTATCCCAGTGTTCCTCTGGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR TCA 90 bp GCCAACTCAGCTGCTTCTCCTGCACTGTACTGTGGACCCCTGGGCTTTCTGCAGCTCTCTCTTCCCCTTTaGGGAGGAGCCCAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: ANSAASPALYCGPLGFLQLSLPL*GGAQLP
Trigger: AGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAG...CTGCAGAAAGCCCAGGGGTCCACAGTACAGTGCAGGAGAAGCAGCTGAGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp TGTGGTTGTTGTGGCTGGAGAACAGCTTCTTCAGGCCATCCATGGTGGGCAAGATTCCTACCCAGGGCCTaGCCAAGGAGAGGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: CGCCGWRTASSGHPWWARFLPRA*PRRGER
Trigger: CCTCTCCCCTCTCCTTGGGCAGGCCCTGGGTAGGAA...TCTTGCCCACCATGGATGGCCTGAAGAAGCTGTTCTCCAGCCACAACAACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp GGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCATTCCTACCCAGGGCCTaGCCAAGGAGAGGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GAISAYTLSLSSPLRRSPFLPRA*PRRGER
Trigger: CCTCTCCCCTCTCCTTGGGCAGGCCCTGGGTAGGAA...TGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR-3UTR CCA 90 bp CCCCACTTCTCAGGAATGACCTTCCACAGCTGGGTACCCCTTAAATCTGCTATGAACATGCGCAGGCACTaGCCCGCAGCCCCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: PHFSGMTFHSWVPLKSAMNMRRH*PAAPAC
Trigger: ACAGGCTGGGGCTGCGGGCCAGTGCCTGCGCATGTT...CATAGCAGATTTAAGGGGTACCCAGCTGTGGAAGGTCATTCCTGAGAAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp TGCCCCATCACTGCCTACAGCCTGAGAGCCAGACCCTCATGGAACAGCAGAATCGTGGACCACAGTAGATaGGACCCAAACAGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: CPITAYSLRARPSWNSRIVDHSR*DPNRRG
Trigger: GCCCCTCCTGTTTGGGTCCCATCTACTGTGGTCCAC...GATTCTGCTGTTCCATGAGGGTCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp TCACTGCCCCAGTCTCTCCAAAGCAGGCATGTTTCAAACTCAGTTCACAAGGCCGGAGAGGCACAAACATaGGCAGGCACTGGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: SLPQSLQSRHVSNSVHKAGEAQT*AGTGPQ
Trigger: CTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCC...GGCCTTGTGAACTGAGTTTGAAACATGCCTGCTTTGGAGAGACTGGGGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp GCAGGCATGTTTCAAACTCAGTTCACAAGGCCTTGTACCTGGGATCAGGCCATCTTCCTACCCAGGGCCTaGCCAAGGAGAGGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: AGMFQTQFTRPCTWDQAIFLPRA*PRRGER
Trigger: CCTCTCCCCTCTCCTTGGGCAGGCCCTGGGTAGGAA...GATGGCCTGATCCCAGGTACAAGGCCTTGTGAACTGAGTTTGAAACATGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp GCCAACTCAGCTGCTTCTCCTGCACTGTACTGTGGACCCCTGGGCTTTCTGCAGTATTGCTGCAAGCCTTaGCTGGGGCCCATTCCAAGA +
Preference number: 2 (lower is better)
Translates to: ANSAASPALYCGPLGFLQYCCKP*LGPIPR
Trigger: TCTTGGAATGGGCCCCAGGCAAGGCTTGCAGCAATA...CTGCAGAAAGCCCAGGGGTCCACAGTACAGTGCAGGAGAAGCAGCTGAGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp TGCCCCATCACTGCCTACAGCCTGAGAGCCAGACCCTCATGGAACAGCAGAATCGCTGGAGAGCCAAGATaGGCACTAGAAAGCCACCAC +
Preference number: 2 (lower is better)
Translates to: CPITAYSLRARPSWNSRIAGEPR*ALESHH
Trigger: GTGGTGGCTTTCTAGTGCCCATCTTGGCTCTCCAGC...GATTCTGCTGTTCCATGAGGGTCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp GGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCACGCAGCCCCAGCCTGTaGAGAAGAAGAAGGGAGACA +
Preference number: 2 (lower is better)
Translates to: GAISAYTLSLSSPLRRSPRSPSL*RRRRET
Trigger: TGTCTCCCTTCTTCTTCTGCACAGGCTGGGGCTGCG...TGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR-3UTR GCA 90 bp GACAACTTAGATGTAAGCCAAAGGAGCCTCAGGTTGACCTGCTCCAAAGGATGCGGAGAGGCACAAACATaGGCAGGCACTGGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: DNLDVSQRSLRLTCSKGCGEAQT*AGTGPQ
Trigger: CTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCC...GCATCCTTTGGAGCAGGTCAACCTGAGGCTCCTTTGGCTTACATCTAAGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp GCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTCGCAGCCCCAGCCTGTaGAGAAGAAGAAGGGAGACA +
Preference number: 2 (lower is better)
Translates to: AISAYTLSLSSPLRRSPARSPSL*RRRRET
Trigger: TGTCTCCCTTCTTCTTCTGCACAGGCTGGGGCTGCG...AGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR-3UTR CCA 90 bp GGTCTTGAGTCAGGGCACAGTCATGGACGTGGTAAGTTCTTCAGCTATCCCATCGTGGACCACAGTAGATaGGACCCAAACAGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: GLESGHSHGRGKFFSYPIVDHSR*DPNRRG
Trigger: GCCCCTCCTGTTTGGGTCCCATCTACTGTGGTCCAC...GATGGGATAGCTGAAGAACTTACCACGTCCATGACTGTGCCCTGACTCAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp GAGGCCCTTTCTCTTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCCCAGTAGGTCAAGCTaGGACCTGGCAGAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: EALSLSSFAKDPRAYFTGPSRSS*DLAEVS
Trigger: GCTCACCTCTGCCAGGTCCCAGCTTGACCTACTGGG...ACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAAGAGAAAGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp CTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAACACATCTAACATGCGCAGGCACTaGCCCGCAGCCCCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: LCQRPKSILHWSRTQNTSNMRRH*PAAPAC
Trigger: ACAGGCTGGGGCTGCGGGCCAGTGCCTGCGCATGTT...AGATGTGTTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CAA 90 bp CTTGCACTATGTAAGAAGGTCAATAGGGAAGGGATTTATCCAGCCTaGTGCTGCCCCATCACTGCCTACAGCCTGAGAGCCAGACCCTCA +
Preference number: 2 (lower is better)
Translates to: LALCKKVNREGIYPA*CCPITAYSLRARPS
Trigger: TGAGGGTCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAAGGCTGGATAAATCCCTTCCCTATTGACCTTCTTACATAGTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CAA 90 bp AGGTACAGCCACTCCTGCAAAAGGAACATTGCATTTCACAGCTGCTaGGAGTGTTACATCTGGCTCACACGCAGGGCTGTGCAATACCGG +
Preference number: 2 (lower is better)
Translates to: RYSHSCKRNIAFHSC*ECYIWLTRRAVQYR
Trigger: CCGGTATTGCACAGCCCTGCGTGTGAGCCAGATGTAACACTCCAAGCAGCTGTGAAATGCAATGTTCCTTTTGCAGGAGTGGCTGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR TCA 90 bp CCCCACTTCTCAGGAATGACCTTCCACAGCTGGGTACCCCTTAAATCTGCTATGAAAGGAGCCTCAGGTTaGCCTGCTCCAAAGGATGCT +
Preference number: 2 (lower is better)
Translates to: PHFSGMTFHSWVPLKSAMKGASG*PAPKDA
Trigger: AGCATCCTTTGGAGCAGGTCAACCTGAGGCTCCTTT...CATAGCAGATTTAAGGGGTACCCAGCTGTGGAAGGTCATTCCTGAGAAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp AGATGTAAGCCAAAGGAGCCTCAGGTTGACCTGCTCCAAAGGATGCTCATGACATGCTGGGGTGTTCACTaGCCCAGTCTCTCCAAAGCA +
Preference number: 2 (lower is better)
Translates to: RCKPKEPQVDLLQRMLMTCWGVH*PSLSKA
Trigger: TGCTTTGGAGAGACTGGGGCAGTGAACACCCCAGCA...TGTCATGAGCATCCTTTGGAGCAGGTCAACCTGAGGCTCCTTTGGCTTACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CAA 90 bp ATATTGCTGCAAGCCTTGCCTGGGGCCCATTCCAAGAGAAGATGGTaGGTGTTTAGACAGAACCCCAGAGGAACACTGGGATACACACAG +
Preference number: 2 (lower is better)
Translates to: ILLQALPGAHSKRRW*VFRQNPRGTLGYTQ
Trigger: CTGTGTGTATCCCAGTGTTCCTCTGGGGTTCTGTCTAAACACCAACCATCTTCTCTTGGAATGGGCCCCAGGCAAGGCTTGCAGCAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp AGAATGAGCACACAGCGGTGTTGTTTTCAGAGCTTGCAAACTCACAGGGAGCATACCTCTAAACCCCTCTaGCTTCCTGGCAGCCTAAGG +
Preference number: 2 (lower is better)
Translates to: RMSTQRCCFQSLQTHREHTSKPL*LPGSLR
Trigger: CCTTAGGCTGCCAGGAAGCCAGAGGGGTTTAGAGGT...ATGCTCCCTGTGAGTTTGCAAGCTCTGAAAACAACACCGCTGTGTGCTCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp AAATTTGAGGTGTATTTACATATCAAATTGGGCTCAGTGGACCACAGTAGATGGAACATGCGCAGGCACTaGCCCGCAGCCCCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: KFEVYLHIKLGSVDHSRWNMRRH*PAAPAC
Trigger: ACAGGCTGGGGCTGCGGGCCAGTGCCTGCGCATGTT...CCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR-3UTR CCA 90 bp AATGTCCATGGCCTGAGGCATGATAGCTGCTCTACCAGCTTTGGATACCATGTGTGTGGTTGTTGTGGCTaGAGAACAGCTTCTTCAGGC +
Preference number: 2 (lower is better)
Translates to: NVHGLRHDSCSTSFGYHVCGCCG*RTASSG
Trigger: GCCTGAAGAAGCTGTTCTCCAGCCACAACAACCACA...CACATGGTATCCAAAGCTGGTAGAGCAGCTATCATGCCTCAGGCCATGGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp GAGGCCCTTTCTCTTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCTCCAGTCTTTCCAATaGCTCCTCCAGAAGCACTGT +
Preference number: 2 (lower is better)
Translates to: EALSLSSFAKDPRAYFTGLQSFQ*LLQKHC
Trigger: ACAGTGCTTCTGGAGGAGCCATTGGAAAGACTGGAG...ACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAAGAGAAAGGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp GGGATTTATCCAGCCTTGTGCTGCCCCATCACTGCCTACAGCCTGAGAGCCAGACAACTGATTCTTGTTTaGCTGATAACCTGGTTCTCA +
Preference number: 2 (lower is better)
Translates to: GIYPALCCPITAYSLRARQLILV*LITWFS
Trigger: TGAGAACCAGGTTATCAGCCAAACAAGAATCAGTTG...TCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAAGGCTGGATAAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp AATATCCTAAAACTCCTTCTACTTAATATAACAGCGAGCAAGGCAGCACCCCACCGCAGCCCCAGCCTGTaGAGAAGAAGAAGGGAGACA +
Preference number: 2 (lower is better)
Translates to: NILKLLLLNITASKAAPHRSPSL*RRRRET
Trigger: TGTCTCCCTTCTTCTTCTGCACAGGCTGGGGCTGCG...GTGGGGTGCTGCCTTGCTCGCTGTTATATTAAGTAGAAGGAGTTTTAGGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp TTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAAGCTGGAGAGCCAAGATaGGCACTAGAAAGCCACCAC +
Preference number: 2 (lower is better)
Translates to: FPALPKTQEHTSLVKNTEAGEPR*ALESHH
Trigger: GTGGTGGCTTTCTAGTGCCCATCTTGGCTCTCCAGC...TTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CAA 90 bp GAGATGGGGCAACTTTCCAAATTTGAGGTGTATTTACATATCAAATaGGGCTCAGTGGACCACAGTAGATGGGACCCAAACAGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: EMGQLSKFEVYLHIK*GSVDHSRWDPNRRG
Trigger: GCCCCTCCTGTTTGGGTCCCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAATTTGGAAAGTTGCCCCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR CAA 90 bp GTCTTCACTCTAAGAATGAGCACACAGCGGTGTTGTTTTCAGAGCTaGCAAACTCACAGGGAGCATTTTACCTCCACCTCATCCCTAGCT +
Preference number: 2 (lower is better)
Translates to: VFTLRMSTQRCCFQS*QTHREHFTSTSSLA
Trigger: AGCTAGGGATGAGGTGGAGGTAAAATGCTCCCTGTGAGTTTGCAAGCTCTGAAAACAACACCGCTGTGTGCTCATTCTTAGAGTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR TCA 90 bp TCAGCTATCCCATCTCCTTCCAAATTGAATCTGCATTTCTGGCTCTCAGCTCTTCACCAGAACTTTCTCTaGCCCTCACCCCACCTCAAT +
Preference number: 2 (lower is better)
Translates to: SAIPSPSKLNLHFWLSALHQNFL*PSPHLN
Trigger: ATTGAGGTGGGGTGAGGGTCAGAGAAAGTTCTGGTG...AAGAGCTGAGAGCCAGAAATGCAGATTCAATTTGGAAGGAGATGGGATAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp TTCCCTTTTCTGGGTCCAGGCTATATTGCTGCAAGCCTTGCCTGGGGCCCATTCGGGTTATTCGGTTTTTaGTGTTTTGCAGTAATGCAA +
Preference number: 2 (lower is better)
Translates to: FPFLGPGYIAASLAWGPFGLFGF*CFAVMQ
Trigger: TTGCATTACTGCAAAACAGCAAAAACCGAATAACCC...GAATGGGCCCCAGGCAAGGCTTGCAGCAATATAGCCTGGACCCAGAAAAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp TTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAACTGAGCTGCAGTACTTaGTACAGGCTGAGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: FPALPKTQEHTSLVKNTELSCST*YRLRRV
Trigger: GACCCTTCTCAGCCTGTACCAAGTACTGCAGCTCAG...TTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CAA 90 bp GATACCTTTCAGGGTCTTCACTCTAAGAATGAGCACACAGCGGTGTaGTTTTCAGAGCTTGCAAACTCACAGGGAGCATTTTACCTCCAC +
Preference number: 2 (lower is better)
Translates to: DTFQGLHSKNEHTAV*FSELANSQGAFYLH
Trigger: GTGGAGGTAAAATGCTCCCTGTGAGTTTGCAAGCTCTGAAAACAACACCGCTGTGTGCTCATTCTTAGAGTGAAGACCCTGAAAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR TCA 90 bp AAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAACACATCTCTAAATCCCCAAAGCCAATTTGCTaGAAGGCTGCTGGGGTGTTC +
Preference number: 2 (lower is better)
Translates to: KTQEHTSLVKNTEHISKSPKPIC*KAAGVF
Trigger: GAACACCCCAGCAGCCTTTCAGCAAATTGGCTTTGG...GGATTTAGAGATGTGTTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR TCA 90 bp AATATCCTAAAACTCCTTCTACTTAATATAACAGCGAGCAAGGCAGCACCCCACCACCAGAACTTTCTCTaGCCCTCACCCCACCTCAAT +
Preference number: 2 (lower is better)
Translates to: NILKLLLLNITASKAAPHHQNFL*PSPHLN
Trigger: ATTGAGGTGGGGTGAGGGTCAGAGAAAGTTCTGGTG...GTGGGGTGCTGCCTTGCTCGCTGTTATATTAAGTAGAAGGAGTTTTAGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp TTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAATTACTGCAAGGTGGCTaGCCCATTCTAGACATGGCT +
Preference number: 2 (lower is better)
Translates to: FPALPKTQEHTSLVKNTELLQGG*PILDMA
Trigger: AGCCATGTCTAGAATGGGCCAGCCACCTTGCAGTAA...TTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp AGAAGACAGACAGCAGACAAAACACACATGGCTGAGTACAGACACAGCACAGGACATTTCACAGCTGCTTaGAGTGTTACATCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: RRQTADKTHMAEYRHSTGHFTAA*SVTSGS
Trigger: TGAGCCAGATGTAACACTCCAAGCAGCTGTGAAATG...TCCTGTGCTGTGTCTGTACTCAGCCATGTGTGTTTTGTCTGCTGTCTGTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR GCA 90 bp AGAATGAGCACACAGCGGTGTTGTTTTCAGAGCTTGCAAACTCACAGGGAGCATAGGTACAGCCACTCCTaGAAAAGGAACATTGCATTT +
Preference number: 2 (lower is better)
Translates to: RMSTQRCCFQSLQTHREHRYSHS*KRNIAF
Trigger: AAATGCAATGTTCCTTTTGCAGGAGTGGCTGTACCT...ATGCTCCCTGTGAGTTTGCAAGCTCTGAAAACAACACCGCTGTGTGCTCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp GAGGCCCTTTCTCTTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCTACCTTCCCAAATCTaGGTGTGGCCTTATTTTAAA +
Preference number: 2 (lower is better)
Translates to: EALSLSSFAKDPRAYFTGLPSQI*VWPYFK
Trigger: TTTAAAATAAGGCCACACCCAGATTTGGGAAGGTAG...ACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAAGAGAAAGGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR TCA 90 bp ACACACCCCTTAGATGCTTTTCACAAGGATTCATCTCTGTTTACCTGCCTTAGTTCCGAGTTTAGTAATTaGGTCCAGGCTGAAGATGGC +
Preference number: 2 (lower is better)
Translates to: THPLDAFHKDSSLFTCLSSEFSN*VQAEDG
Trigger: GCCATCTTCAGCCTGGACTCAATTACTAAACTCGGA...ACTAAGGCAGGTAAACAGAGATGAATCCTTGTGAAAAGCATCTAAGGGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp ACACACCCCTTAGATGCTTTTCACAAGGATTCATCTCTGTTTACCTGCCTTAGTTTGAATCTGCATTTCTaGCTCTCAGCTCTTAGAGCA +
Preference number: 2 (lower is better)
Translates to: THPLDAFHKDSSLFTCLSLNLHF*LSALRA
Trigger: TGCTCTAAGAGCTGAGAGCCAGAAATGCAGATTCAA...ACTAAGGCAGGTAAACAGAGATGAATCCTTGTGAAAAGCATCTAAGGGGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CCA 90 bp TCCTCCAGAAGCACTGTCTCGAATATCCTAAAACTCCTTCTACTTAATATAACATTACTGCAAGGTGGCTaGCCCATTCTAGACATGGCT +
Preference number: 2 (lower is better)
Translates to: SSRSTVSNILKLLLLNITLLQGG*PILDMA
Trigger: AGCCATGTCTAGAATGGGCCAGCCACCTTGCAGTAA...TGTTATATTAAGTAGAAGGAGTTTTAGGATATTCGAGACAGTGCTTCTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR TCA 90 bp TCCTCCAGAAGCACTGTCTCGAATATCCTAAAACTCCTTCTACTTAATATAACATCCGAGTTTAGTAATTaGGTCCAGGCTGAAGATGGC +
Preference number: 2 (lower is better)
Translates to: SSRSTVSNILKLLLLNITSEFSN*VQAEDG
Trigger: GCCATCTTCAGCCTGGACTCAATTACTAAACTCGGA...TGTTATATTAAGTAGAAGGAGTTTTAGGATATTCGAGACAGTGCTTCTGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR TCA 90 bp GTCTCGAATATCCTAAAACTCCTTCTACTTAATATAACAGCGAGCAAGGCAGCATTGGCTTATGAAAATTaGAGGTTGCTTCAGAACTCA +
Preference number: 2 (lower is better)
Translates to: VSNILKLLLLNITASKAALAYEN*RLLQNS
Trigger: TGAGTTCTGAAGCAACCTTCAATTTTCATAAGCCAA...TGCTGCCTTGCTCGCTGTTATATTAAGTAGAAGGAGTTTTAGGATATTCGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 72 bp CATCCCAGAGCTATGAGAGGAATCACTGCGGGATGCTaGGCATGTCAGGGAGGACCTCCTCGCTGCACGCAA +
Preference number: 3 (lower is better)
Translates to: HPRAMRGITAGC*ACQGGPPRCTQ
Trigger: TTGCGTGCAGCGAGGAGGTCCTCCCTGACATGCTCAGCATCCCGCAGTGATTCCTCTCATAGCTCTGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp AACCAAGCCCCATCCCAGAGCTATGAGAGGAATCACTaGGGGATGCTGAGCATGTCAGGGAGGACCTCCTCG +
Preference number: 3 (lower is better)
Translates to: NQAPSQSYERNH*GMLSMSGRTSS
Trigger: CGAGGAGGTCCTCCCTGACATGCTCAGCATCCCGCAGTGATTCCTCTCATAGCTCTGGGATGGGGCTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp CTGACCCTCACCCCACCTCAATGTAAGTCTCTGACTGAAAGAGCCCTAGAGCCCTCTCTCTCTTCCCCTTaGAGGAGGAGCCCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: LTLTPPQCKSLTERALEPSLSSP*RRSPAS
Trigger: GGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGA...GGGCTCTAGGGCTCTTTCAGTCAGAGACTTACATTGAGGTGGGGTGAGGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 72 bp ATCCAGCCTTGTGCTGCCCCATCACTGCCTACAGCCTaGGAGCCAGACCCTCATGGAACAGCAGAATCCTTC +
Preference number: 3 (lower is better)
Translates to: IQPCAAPSLPTA*EPDPHGTAESF
Trigger: GAAGGATTCTGCTGTTCCATGAGGGTCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAAGGCTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp GGAAGGGATTTATCCAGCCTTGTGCTGCCCCATCACTaGCTACAGCCTGAGAGCCAGACCCTCATGGAACAG +
Preference number: 3 (lower is better)
Translates to: GRDLSSLVLPHH*LQPESQTLMEQ
Trigger: CTGTTCCATGAGGGTCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAAGGCTGGATAAATCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp TTGCTAGGGGGTATCCTTAGACCAGGCCAACTCAGCTaGTTCTCCTGCACTGTACTGTGGACCCCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: LLGGILRPGQLS*FSCTVLWTPGL
Trigger: AAGCCCAGGGGTCCACAGTACAGTGCAGGAGAAGCAGCTGAGTTGGCCTGGTCTAAGGATACCCCCTAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 72 bp GGGTCCATGTCCAAAGCCAATTTGCTGAAAGGCTGCTaGGGTGTTCACTGCCCCAGTCTCTCCAAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: GSMSKANLLKGC*GVHCPSLSKAG
Trigger: GCCTGCTTTGGAGAGACTGGGGCAGTGAACACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACATGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 72 bp AGAGAGGGGAGAGCGAGGGGCTTTCTGTGGTTGTTGTaGCTGGAGAACAGCTTCTTCAGGCCATCCATGGTG +
Preference number: 3 (lower is better)
Translates to: REGRARGFLWLL*LENSFFRPSMV
Trigger: CACCATGGATGGCCTGAAGAAGCTGTTCTCCAGCCACAACAACCACAGAAAGCCCCTCGCTCTCCCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 72 bp ACTCAGCTGCTTCTCCTGCACTGTACTGTGGACCCCTaGGCTTTCTGCAGGTACAGCCACTCCTGCAAAAGG +
Preference number: 3 (lower is better)
Translates to: TQLLLLHCTVDP*AFCRYSHSCKR
Trigger: CCTTTTGCAGGAGTGGCTGTACCTGCAGAAAGCCCAGGGGTCCACAGTACAGTGCAGGAGAAGCAGCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR TCA 72 bp CAGAGCTTAAGCATAGTGCATACTGGGGCTCAAAGCTaGGCACCTCTAAACCCCTCTGGCTTCCTGGCAGCC +
Preference number: 3 (lower is better)
Translates to: QSLSIVHTGAQS*APLNPSGFLAA
Trigger: GGCTGCCAGGAAGCCAGAGGGGTTTAGAGGTGCTCAGCTTTGAGCCCCAGTATGCACTATGCTTAAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp AAGGTCAATAGGGAAGGGATTTATCCAGCCTTGTGCTaGCCCATCACTGCCTACAGCCTGAGAGCCAGACCC +
Preference number: 3 (lower is better)
Translates to: KVNREGIYPALC*PITAYSLRARP
Trigger: GGGTCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAAGGCTGGATAAATCCCTTCCCTATTGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 72 bp GGCATGTTTCAAACTCAGTTCACAAGGCCTTGTACCTaGGATCAGGCCATCACCGAGGCTGGCCTTGACCCA +
Preference number: 3 (lower is better)
Translates to: GMFQTQFTRPCT*DQAITEAGLDP
Trigger: TGGGTCAAGGCCAGCCTCGGTGATGGCCTGATCCCAGGTACAAGGCCTTGTGAACTGAGTTTGAAACATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 72 bp GTTATGGCTGTGCAACTTGCAGCTGGAGAGCCAAGATaGGCACTAGAAAGCCACCACTCCCTCTACCAGCAG +
Preference number: 3 (lower is better)
Translates to: VMAVQLAAGEPR*ALESHHSLYQQ
Trigger: CTGCTGGTAGAGGGAGTGGTGGCTTTCTAGTGCCCATCTTGGCTCTCCAGCTGCAAGTTGCACAGCCATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp TTCCCTTTTCTGGGTCCAGGCTATATTGCTGCAAGCCTTGCCTGGGGCCCATTCGCAGCTCAGGCTCCATaGAAGTGTCCAAAGTGCAAG +
Preference number: 3 (lower is better)
Translates to: FPFLGPGYIAASLAWGPFAAQAP*KCPKCK
Trigger: CTTGCACTTTGGACACTTCAATGGAGCCTGAGCTGC...GAATGGGCCCCAGGCAAGGCTTGCAGCAATATAGCCTGGACCCAGAAAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR TCA 72 bp AATGCAACCAGAAAGTCACAGTTTCTCCTTCCACAGTaGAGCAGACCCACTGGCGGGGGTGATGGCAAGGGA +
Preference number: 3 (lower is better)
Translates to: NATRKSQFLLPQ*SRPTGGGDGKG
Trigger: TCCCTTGCCATCACCCCCGCCAGTGGGTCTGCTTCACTGTGGAAGGAGAAACTGTGACTTTCTGGTTGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR TCA 72 bp GGGCATTTGGCTCACTTGAGGAGTGTCCCATACCACTaGAGGATTCCTAGGCAGACAGCACGGAGTTGCTCA +
Preference number: 3 (lower is better)
Translates to: GHLAHLRSVPYH*RIPRQTARSCS
Trigger: TGAGCAACTCCGTGCTGTCTGCCTAGGAATCCTTCAGTGGTATGGGACACTCCTCAAGTGAGCCAAATGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp GAAGGGTCCATGTCCAAAGCCAATTTGCTGAAAGGCTaGTGGGGTGTTCACTGCCCCAGTCTCTCCAAAGCA +
Preference number: 3 (lower is better)
Translates to: EGSMSKANLLKG*WGVHCPSLSKA
Trigger: TGCTTTGGAGAGACTGGGGCAGTGAACACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACATGGACCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR GCA 72 bp CCCTTTTCTGGGTCCAGGCTATATTGCTGCAAGCCTTaGCTGGGGCCCATTCCAAGAGAAGATGGTTGGTGT +
Preference number: 3 (lower is better)
Translates to: PFSGSRLYCCKP*LGPIPREDGWC
Trigger: ACACCAACCATCTTCTCTTGGAATGGGCCCCAGGCAAGGCTTGCAGCAATATAGCCTGGACCCAGAAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp GTGGACCCCTGGGCTTTCTGCAGGTACAGCCACTCCTaGAAAAGGAACATTGCATTTCACAGCTGCTTGGAG +
Preference number: 3 (lower is better)
Translates to: VDPWAFCRYSHS*KRNIAFHSCLE
Trigger: CTCCAAGCAGCTGTGAAATGCAATGTTCCTTTTGCAGGAGTGGCTGTACCTGCAGAAAGCCCAGGGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp GCCAACTCAGCTGCTTCTCCTGCACTGTACTGTGGACCCCTGGGCTTTCTGCAGCCATCTCCTTCCAAATaGAATCTGCATTTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: ANSAASPALYCGPLGFLQPSPSK*NLHFWL
Trigger: GAGCCAGAAATGCAGATTCAATTTGGAAGGAGATGG...CTGCAGAAAGCCCAGGGGTCCACAGTACAGTGCAGGAGAAGCAGCTGAGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp GTTGACCTGCTCCAAAGGATGCTCATGACACTGAGCTaGAGTACTTGGTACAGGCTGAGAAGGGTCCATGTC +
Preference number: 3 (lower is better)
Translates to: VDLLQRMLMTLS*STWYRLRRVHV
Trigger: GACATGGACCCTTCTCAGCCTGTACCAAGTACTGCAGCTCAGTGTCATGAGCATCCTTTGGAGCAGGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR GCA 72 bp TCCCTGCCTGGTGTAGAAGGCTATTTCTGCACATCATaGCTGAGGCTCCCATTCAAATGTCCATGGCCTGAG +
Preference number: 3 (lower is better)
Translates to: SLPGVEGYFCTS*LRLPFKCPWPE
Trigger: CTCAGGCCATGGACATTTGAATGGGAGCCTCAGGCATGATGTGCAGAAATAGCCTTCTACACCAGGCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp AAGAAGGTCAATAGGGAAGGGATTTATCCAGCCTTGTaGTGCCCCATCACTGCCTACAGCCTGAGAGCCAGA +
Preference number: 3 (lower is better)
Translates to: KKVNREGIYPAL*CPITAYSLRAR
Trigger: TCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAAGGCTGGATAAATCCCTTCCCTATTGACCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 72 bp AAGCCTTGCCTGGGGCCCATTCCAAGAGAAGATGGTTaGTGTTTAGACAGAACCCCAGAGGAACACTGGGAT +
Preference number: 3 (lower is better)
Translates to: KPCLGPIPREDG*CLDRTPEEHWD
Trigger: ATCCCAGTGTTCCTCTGGGGTTCTGTCTAAACACCAACCATCTTCTCTTGGAATGGGCCCCAGGCAAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 72 bp ACGCAAGAGTCGTCAGAGCTTAAGCATAGTGCATACTaGGGCTCAAAGCTGAGCACCTCTAAACCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: TQESSELKHSAY*GSKLSTSKPLW
Trigger: CCAGAGGGGTTTAGAGGTGCTCAGCTTTGAGCCCCAGTATGCACTATGCTTAAGCTCTGACGACTCTTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp GGGATTTATCCAGCCTTGTGCTGCCCCATCACTGCCTACAGCCTGAGAGCCAGATTTCTCTTTCCAGCTTaGCCAAAGACCCAAGAGCAT +
Preference number: 3 (lower is better)
Translates to: GIYPALCCPITAYSLRARFLFPA*PKTQEH
Trigger: ATGCTCTTGGGTCTTTGGCAAAGCTGGAAAGAGAAA...TCTGGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAAGGCTGGATAAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR TCA 72 bp CATATCACCTCCAAACACCCTAGGAGGCCCCACAAGTaGTTCCAATGTCAAGGGCACGTGGAGAAAGTCTTG +
Preference number: 3 (lower is better)
Translates to: HITSKHPRRPHK*FQCQGHVEKVL
Trigger: CAAGACTTTCTCCACGTGCCCTTGACATTGGAATCACTTGTGGGGCCTCCTAGGGTGTTTGGAGGTGATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR GCA 72 bp AGCCACTCCTGCAAAAGGAACATTGCATTTCACAGCTaGTTGGAGTGTTACATCTGGCTCACACGCAGGGCT +
Preference number: 3 (lower is better)
Translates to: SHSCKRNIAFHS*LECYIWLTRRA
Trigger: AGCCCTGCGTGTGAGCCAGATGTAACACTCCAAGCAGCTGTGAAATGCAATGTTCCTTTTGCAGGAGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 72 bp CTCCAAAGGATGCTCATGACACTGAGCTGCAGTACTTaGTACAGGCTGAGAAGGGTCCATGTCCAAAGCCAA +
Preference number: 3 (lower is better)
Translates to: LQRMLMTLSCST*YRLRRVHVQSQ
Trigger: TTGGCTTTGGACATGGACCCTTCTCAGCCTGTACCAAGTACTGCAGCTCAGTGTCATGAGCATCCTTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 72 bp GGACCTTTCCTCACAACTTGCTCCTTACCCTGCAGTTaGACAGCTATGACAGGAGATAAGGACAGGGATGTC +
Preference number: 3 (lower is better)
Translates to: GPFLTTCSLPCS*TAMTGDKDRDV
Trigger: GACATCCCTGTCCTTATCTCCTGTCATAGCTGTCCAACTGCAGGGTAAGGAGCAAGTTGTGAGGAAAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 72 bp GAGAGAGTGAAGACCAAACAGCAGAGGCCCTGGTACTaGGCAACAGGTTCAGGTTTATTTCCATCACGACAC +
Preference number: 3 (lower is better)
Translates to: ERVKTKQQRPWY*ATGSGLFPSRH
Trigger: GTGTCGTGATGGAAATAAACCTGAACCTGTTGCCCAGTACCAGGGCCTCTGCTGTTTGGTCTTCACTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 72 bp ACTCCTGCAAAAGGAACATTGCATTTCACAGCTGCTTaGAGTGTTACATCTGGCTCACACGCAGGGCTGTGC +
Preference number: 3 (lower is better)
Translates to: TPAKGTLHFTAA*SVTSGSHAGLC
Trigger: GCACAGCCCTGCGTGTGAGCCAGATGTAACACTCCAAGCAGCTGTGAAATGCAATGTTCCTTTTGCAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp CACTTCTCAGGAATGACCTTCCACAGCTGGGTACCCCTTAAATCTGCTATGTTCTCAGTTCACAAGGCCTaGTACCTGGGATCAGGCCAT +
Preference number: 3 (lower is better)
Translates to: HFSGMTFHSWVPLKSAMFSVHKA*YLGSGH
Trigger: ATGGCCTGATCCCAGGTACAAGGCCTTGTGAACTGA...GAACATAGCAGATTTAAGGGGTACCCAGCTGTGGAAGGTCATTCCTGAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp GAGGCCCTTTCTCTTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTATGTCCAAAGCCAATTaGCTGAAAGGCTGCTGGGGT +
Preference number: 3 (lower is better)
Translates to: EALSLSSFAKDPRAYFTGMSKAN*LKGCWG
Trigger: ACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACAT...ACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAAGAGAAAGGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 72 bp AGAAAACTGAACAGTGATGACGGTAAAGCTGGGATTTaGAGTCCACCAGAGCCCTGTGGCCTCATCCTTGAG +
Preference number: 3 (lower is better)
Translates to: RKLNSDDGKAGI*SPPEPCGLILE
Trigger: CTCAAGGATGAGGCCACAGGGCTCTGGTGGACTTCAAATCCCAGCTTTACCGTCATCACTGTTCAGTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp AAAGCCAATTTGCTGAAAGGCTGCTGGGGTGTTCACTaGCCCAGTCTCTCCAAAGCAGGCATGTTTCAAACT +
Preference number: 3 (lower is better)
Translates to: KANLLKGCWGVH*PSLSKAGMFQT
Trigger: AGTTTGAAACATGCCTGCTTTGGAGAGACTGGGGCAGTGAACACCCCAGCAGCCTTTCAGCAAATTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR GCA 72 bp TCCACAGCTGGGTACCCCTTAAATCTGCTATGTTCCTaGCTCCAGGTTTCCAAATCCATGAAGCCCTTTGCA +
Preference number: 3 (lower is better)
Translates to: STAGYPLNLLCS*LQVSKSMKPFA
Trigger: TGCAAAGGGCTTCATGGATTTGGAAACCTGGAGGCAGGAACATAGCAGATTTAAGGGGTACCCAGCTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp TCAGAACTCATTGATTTTACTGCAAGGTGGCTGGCCCATTCTAGACATGGCTTTAGGGGCTTTCTGTGGTaGTTGTGGCTGGAGAACAGC +
Preference number: 3 (lower is better)
Translates to: SELIDFTARWLAHSRHGFRGFLW*LWLENS
Trigger: GCTGTTCTCCAGCCACAACAACCACAGAAAGCCCCT...AAAGCCATGTCTAGAATGGGCCAGCCACCTTGCAGTAAAATCAATGAGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 72 bp ATGGTGGGCAAGAAGTGTAGAAATAAAGCCACCACATaGTACGGTCTTGAGTCAGGGCACAGTCATGGACGT +
Preference number: 3 (lower is better)
Translates to: MVGKKCRNKATT*YGLESGHSHGR
Trigger: ACGTCCATGACTGTGCCCTGACTCAAGACCGTATCATGTGGTGGCTTTATTTCTACACTTCTTGCCCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR GCA 72 bp GGGAAAGAACAAGGAGGCCCTTTCTCTTTCCAGCTTTaGCAAAGACCCAAGAGCATACTTCACTGGTCAAGA +
Preference number: 3 (lower is better)
Translates to: GKEQGGPFSFQL*QRPKSILHWSR
Trigger: TCTTGACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAAGAGAAAGGGCCTCCTTGTTCTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR GCA 72 bp AACTGTTTTCCCAGCTCCCTAGGCTCAAATGAAATTTaGAGTGTCAGGGGACTTGCTGTCCTCTCTTGGAAG +
Preference number: 3 (lower is better)
Translates to: NCFPSSLGSNEI*SVRGLAVLSWK
Trigger: CTTCCAAGAGAGGACAGCAAGTCCCCTGACACTGCAAATTTCATTTGAGCCTAGGGAGCTGGGAAAACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp GAGTTACCCCTAAAGGGCTCAAAACAGGAGACAGGCTaGAAAGGGATACCTTTCAGGGTCTTCACTCTAAGA +
Preference number: 3 (lower is better)
Translates to: ELPLKGSKQETG*KGIPFRVFTLR
Trigger: TCTTAGAGTGAAGACCCTGAAAGGTATCCCTTTGCAGCCTGTCTCCTGTTTTGAGCCCTTTAGGGGTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 72 bp TGTGGCTGGAGAACAGCTTCTTCAGGCCATCCATGGTaGGCAAGAAGTGTAGAAATAAAGCCACCACATGAT +
Preference number: 3 (lower is better)
Translates to: CGWRTASSGHPW*ARSVEIKPPHD
Trigger: ATCATGTGGTGGCTTTATTTCTACACTTCTTGCCCACCATGGATGGCCTGAAGAAGCTGTTCTCCAGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 72 bp TGTTGTGGCTGGAGAACAGCTTCTTCAGGCCATCCATaGTGGGCAAGAAGTGTAGAAATAAAGCCACCACAT +
Preference number: 3 (lower is better)
Translates to: CCGWRTASSGHP*WARSVEIKPPH
Trigger: ATGTGGTGGCTTTATTTCTACACTTCTTGCCCACCATGGATGGCCTGAAGAAGCTGTTCTCCAGCCACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 72 bp TTTAAAGTCTTAGGTTATGGCTGTGCAACTTGCAGCTaGAGAGCCAAGATGGGCACTAGAAAGCCACCACTC +
Preference number: 3 (lower is better)
Translates to: FKVLGYGCATCS*RAKMGTRKPPL
Trigger: GAGTGGTGGCTTTCTAGTGCCCATCTTGGCTCTCCAGCTGCAAGTTGCACAGCCATAACCTAAGACTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 72 bp TATACTCAGGGGTTGGTCCAAGCCACTGAATGTTTCTaGGAAAGAACAAGGAGGCCCTTTCTCTTTCCAGCT +
Preference number: 3 (lower is better)
Translates to: YTQGLVQATECF*ERTRRPFLFPA
Trigger: AGCTGGAAAGAGAAAGGGCCTCCTTGTTCTTTCCCAGAAACATTCAGTGGCTTGGACCAACCCCTGAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 72 bp CTACCAGACAGAATTTCCTTATCGTTTTCCCTTTTCTaGGTCCAGGCTATATTGCTGCAAGCCTTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: LPDRISLSFSLF*VQAILLQALPG
Trigger: CCCAGGCAAGGCTTGCAGCAATATAGCCTGGACCCAGAAAAGGGAAAACGATAAGGAAATTCTGTCTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp AATATCCTAAAACTCCTTCTACTTAATATAACAGCGAGCAAGGCAGCACCCCACAGGGGCTTTCTGTGGTaGTTGTGGCTGGAGAACAGC +
Preference number: 3 (lower is better)
Translates to: NILKLLLLNITASKAAPHRGFLW*LWLENS
Trigger: GCTGTTCTCCAGCCACAACAACCACAGAAAGCCCCT...GTGGGGTGCTGCCTTGCTCGCTGTTATATTAAGTAGAAGGAGTTTTAGGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp GGGTGTTCACTGCCCCAGTCTCTCCAAAGCAGGCATGTTTCAAACTCAGTTCACTATTTACATATCAAATaGGGCTCAGTGGACCACAGT +
Preference number: 3 (lower is better)
Translates to: GCSLPQSLQSRHVSNSVHYLHIK*GSVDHS
Trigger: ACTGTGGTCCACTGAGCCCAATTTGATATGTAAATA...GTGAACTGAGTTTGAAACATGCCTGCTTTGGAGAGACTGGGGCAGTGAACACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp AAATTGAAGGTTGCTTCAGAACTCATTGATTTTACTGCAAGGTGGCTGGCCCATGGCTTTCTGTGGTTGTaGTGGCTGGAGAACAGCTTC +
Preference number: 3 (lower is better)
Translates to: KLKVASELIDFTARWLAHGFLWL*WLENSF
Trigger: GAAGCTGTTCTCCAGCCACAACAACCACAGAAAGCC...ATGGGCCAGCCACCTTGCAGTAAAATCAATGAGTTCTGAAGCAACCTTCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 72 bp AGCCAATGTATATACTCAGGGGTTGGTCCAAGCCACTaGATGTTTCTGGGAAAGAACAAGGAGGCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: SQCIYSGVGPSH*MFLGKNKEALS
Trigger: AGAAAGGGCCTCCTTGTTCTTTCCCAGAAACATTCAGTGGCTTGGACCAACCCCTGAGTATATACATTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR GCA 72 bp TTCCTGCCTCCAGGTTTCCAAATCCATGAAGCCCTTTaGACCTACCAGACAGAATTTCCTTATCGTTTTCCC +
Preference number: 3 (lower is better)
Translates to: FLPPGFQIHEAL*TYQTEFPYRFP
Trigger: GGGAAAACGATAAGGAAATTCTGTCTGGTAGGTGCAAAGGGCTTCATGGATTTGGAAACCTGGAGGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 72 bp TTACATATCAAATTGGGCTCAGTGGACCACAGTAGATaGGACCCAAACAGGAGGGGCAATATCAGCCTATAC +
Preference number: 3 (lower is better)
Translates to: LHIKLGSVDHSR*DPNRRGNISLY
Trigger: GTATAGGCTGATATTGCCCCTCCTGTTTGGGTCCCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR-3UTR CAA 90 bp TCCTCCAGAAGCACTGTCTCGAATATCCTAAAACTCCTTCTACTTAATATAACATCTCTCTCTTCCCCTTaGAGGAGGAGCCCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: SSRSTVSNILKLLLLNITSLSSP*RRSPAS
Trigger: GGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGA...TGTTATATTAAGTAGAAGGAGTTTTAGGATATTCGAGACAGTGCTTCTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp GACAACTTAGATGTAAGCCAAAGGAGCCTCAGGTTGACCTGCTCCAAAGGATGCTATTTACATATCAAATaGGGCTCAGTGGACCACAGT +
Preference number: 3 (lower is better)
Translates to: DNLDVSQRSLRLTCSKGCYLHIK*GSVDHS
Trigger: ACTGTGGTCCACTGAGCCCAATTTGATATGTAAATA...GCATCCTTTGGAGCAGGTCAACCTGAGGCTCCTTTGGCTTACATCTAAGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CCA 72 bp AATTTGAGGTGTATTTACATATCAAATTGGGCTCAGTaGACCACAGTAGATGGGACCCAAACAGGAGGGGCA +
Preference number: 3 (lower is better)
Translates to: NLRCIYISNWAQ*TTVDGTQTGGA
Trigger: TGCCCCTCCTGTTTGGGTCCCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR-3UTR CAA 90 bp AACAGCAGAATCCTTCAGGTACATCTGCTCACAAGACTAAGAAAAAGATTCCTTATGTCCAAAGCCAATTaGCTGAAAGGCTGCTGGGGT +
Preference number: 3 (lower is better)
Translates to: NSRILQVHLLTRLRKRFLMSKAN*LKGCWG
Trigger: ACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACAT...AAGGAATCTTTTTCTTAGTCTTGTGAGCAGATGTACCTGAAGGATTCTGCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp CTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAACACATCTTTGCTTCAGAACTCATaGATTTTACTGCAAGGTGGC +
Preference number: 3 (lower is better)
Translates to: LCQRPKSILHWSRTQNTSLLQNS*ILLQGG
Trigger: GCCACCTTGCAGTAAAATCAATGAGTTCTGAAGCAA...AGATGTGTTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 72 bp GCACTGTGGAGTTCCCTGGACCCAAGACTTGGCTTATaGAAATTGAAGGTTGCTTCAGAACTCATTGATTTT +
Preference number: 3 (lower is better)
Translates to: ALWSSLDPRLGL*KLKVASELIDF
Trigger: AAAATCAATGAGTTCTGAAGCAACCTTCAATTTTCATAAGCCAAGTCTTGGGTCCAGGGAACTCCACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR TCA 72 bp AGAAGATTTCTCCTCATCCGTACCTTCGAAGAAAACTaGACAGTGATGACGGTAAAGCTGGGATTTGAAGTC +
Preference number: 3 (lower is better)
Translates to: RRFLLIRTFEEN*TVMTVKLGFEV
Trigger: GACTTCAAATCCCAGCTTTACCGTCATCACTGTTCAGTTTTCTTCGAAGGTACGGATGAGGAGAAATCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR GCA 72 bp AAAATAAACAGGATGTCATCCCTCTTAATACACACATaGACGCACACACACACACACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: KINRMSSLLIHT*THTHTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCATGTGTGTATTAAGAGGGATGACATCCTGTTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR TCA 72 bp GGAGTTCCCTGGACCCAAGACTTGGCTTATGAAAATTaGAGGTTGCTTCAGAACTCATTGATTTTACTGCAA +
Preference number: 3 (lower is better)
Translates to: GVPWTQDLAYEN*RLLQNSLILLQ
Trigger: TTGCAGTAAAATCAATGAGTTCTGAAGCAACCTTCAATTTTCATAAGCCAAGTCTTGGGTCCAGGGAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR GCA 72 bp GGAACACTGGGATACACACAGATCAATAAGTCTTATTaGTTGCACTATGTAAGAAGGTCAATAGGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: GTLGYTQINKSY*LHYVRRSIGKG
Trigger: TCCCTTCCCTATTGACCTTCTTACATAGTGCAAGCAATAAGACTTATTGATCTGTGTGTATCCCAGTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CCA 72 bp TTGCTTCAGAACTCATTGATTTTACTGCAAGGTGGCTaGCCCATTCTAGACATGGCTTTGATTAATGGGAAA +
Preference number: 3 (lower is better)
Translates to: LLQNSLILLQGG*PILDMALINGK
Trigger: TTTCCCATTAATCAAAGCCATGTCTAGAATGGGCCAGCCACCTTGCAGTAAAATCAATGAGTTCTGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR-3UTR CAA 90 bp AATATCCTAAAACTCCTTCTACTTAATATAACAGCGAGCAAGGCAGCACCCCACATTCTAGACATGGCTTaGATTAATGGGAAAACAGAG +
Preference number: 3 (lower is better)
Translates to: NILKLLLLNITASKAAPHILDMA*INGKTE
Trigger: CTCTGTTTTCCCATTAATCAAAGCCATGTCTAGAAT...GTGGGGTGCTGCCTTGCTCGCTGTTATATTAAGTAGAAGGAGTTTTAGGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp GCCTGCCCAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCCCGCAGCTTGCAAGAGTGCTGCTaGGCCCGCTGTGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ACPRRGERHKHAQALARSLQECC*ARCGLQ
Trigger: CTGCAAGCCACAGCGGGCTCAGCAGCACTCTTGCAA...GCTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTGGGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp GCCTGCCCAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCCCGCAGCGTGGAAACGAAGCAATaGCTGCTGTCCTGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: ACPRRGERHKHAQALARSVETKQ*LLSCSA
Trigger: TGCCGAGCAGGACAGCAGTCATTGCTTCGTTTCCAC...GCTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTGGGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp GCCTGCCCAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCCCGCAGCGCACGCAGAAGTAGATaGTCGACTCATTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ACPRRGERHKHAQALARSARRSR*STHCLP
Trigger: TGGGAGGCAATGAGTCGAGCATCTACTTCTGCGTGC...GCTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTGGGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp CAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCCCGCAGCCCCAGCCTGGCTTGCTCCTTCTTaGAGATGCAGTCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: QGEGRGTNMRRHWPAAPAWLAPS*RCSQSA
Trigger: TGCACTCTGACTGCATCTTCAAGAAGGAGCAAGCCA...GGCTGGGGCTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp CAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCCCGCAGCCCCAGCCCAGGCTTCCAACATGTaGTATTGTCCCACATGCCAG +
Preference number: 4 (lower is better)
Translates to: QGEGRGTNMRRHWPAAPAQASNM*YCPTCQ
Trigger: CTGGCATGTGGGACAATATCACATGTTGGAAGCCTG...GGCTGGGGCTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp GCCAACTCAGCTGCTTCTCCTGCACTGTACTGTGGACCCCTGGGCTTTCTGCAGCCCCGTTCACTCCACTaGTGGCCAGGGATGGATGCC +
Preference number: 4 (lower is better)
Translates to: ANSAASPALYCGPLGFLQPRSLH*WPGMDA
Trigger: GGCATCCATCCCTGGCCAGCAGTGGAGTGAACGGGG...CTGCAGAAAGCCCAGGGGTCCACAGTACAGTGCAGGAGAAGCAGCTGAGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp TATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGGTGTCGGCCGGGAGGCTaGACATGCGGAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: YTLSLSSPLRRSPASYPGCRPGG*TCGAGS
Trigger: GCTCCCAGCTCCGCATGTCCAGCCTCCCGGCCGACA...CCCTGGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp CAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCCCGCAGCCCCAGCCACCATCTCACCTATTTaGGCAGGCTTCCAACATGTG +
Preference number: 4 (lower is better)
Translates to: QGEGRGTNMRRHWPAAPATISPI*AGFQHV
Trigger: CACATGTTGGAAGCCTGCTCAAATAGGTGAGATGGT...GGCTGGGGCTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp GCCTGCCCAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCCCGCAGCGGTATAGGCCTTCAATaGACAGCCAGAAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: ACPRRGERHKHAQALARSGIGLQ*TARSSW
Trigger: CCAACTACTTCTGGCTGTTCATTGAAGGCCTATACC...GCTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTGGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp TATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGGCCCCGTTCACTCCACTaGTGGCCAGGGATGGATGCC +
Preference number: 4 (lower is better)
Translates to: YTLSLSSPLRRSPASYPGPRSLH*WPGMDA
Trigger: GGCATCCATCCCTGGCCAGCAGTGGAGTGAACGGGG...CCCTGGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp GGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCACCCCGTTCACTCCACTaGTGGCCAGGGATGGATGCC +
Preference number: 4 (lower is better)
Translates to: GAISAYTLSLSSPLRRSPPRSLH*WPGMDA
Trigger: GGCATCCATCCCTGGCCAGCAGTGGAGTGAACGGGG...TGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp AGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCTGCTCTTGCTCAGGATaGACAGCTGGGTGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: SLYPISLFPFEEEPSFLPCSCSG*TAGCPR
Trigger: ACGGGGGCACCCAGCTGTCCATCCTGAGCAAGAGCA...GGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp CTGACCCTCACCCCACCTCAATGTAAGTCTCTGACTGAAAGAGCCCTAGAGCCCCTGGACATGCGGAGCTaGGAGCTGCTCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LTLTPPQCKSLTERALEPLDMRS*ELLLLR
Trigger: CCTGAGCAAGAGCAGCTCCCAGCTCCGCATGTCCAG...GGGCTCTAGGGCTCTTTCAGTCAGAGACTTACATTGAGGTGGGGTGAGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp GACAACTTAGATGTAAGCCAAAGGAGCCTCAGGTTGACCTGCTCCAAAGGATGCTGTCGGCCGGGAGGCTaGACATGCGGAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: DNLDVSQRSLRLTCSKGCCRPGG*TCGAGS
Trigger: GCTCCCAGCTCCGCATGTCCAGCCTCCCGGCCGACA...GCATCCTTTGGAGCAGGTCAACCTGAGGCTCCTTTGGCTTACATCTAAGTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR GCA 90 bp GGTCTTGAGTCAGGGCACAGTCATGGACGTGGTAAGTTCTTCAGCTATCCCATCACCAGCCATCCTCAGTaGAGTTCCGGCCCACGACCC +
Preference number: 4 (lower is better)
Translates to: GLESGHSHGRGKFFSYPITSHPQ*SSGPRP
Trigger: GGGTCGTGGGCCGGAACTGCACTGAGGATGGCTGGT...GATGGGATAGCTGAAGAACTTACCACGTCCATGACTGTGCCCTGACTCAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR GCA 90 bp TATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGGGAGCCCGCTGTGGCTTaGAGTAGCATTTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: YTLSLSSPLRRSPASYPGEPAVA*SSISAR
Trigger: GCGTGCAGAAATGCTACTGCAAGCCACAGCGGGCTC...CCCTGGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp GGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTGGGAGCTGCTCTTaGTCAGGATGGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GAISAYTLSLSSPLRRSPAGSCS*SGWTAG
Trigger: CCCAGCTGTCCATCCTGAGCAAGAGCAGCTCCCAGC...TGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp AGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGTCGTTGGCCCTCTaGATCCTCTCCAGGCACATG +
Preference number: 4 (lower is better)
Translates to: SLYPISLFPFEEEPSFLPRSLAL*ILSRHM
Trigger: CATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCT...GGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp GGAGGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCGGCCCATCAGGTCGTTaGCCCTCTGGATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GGAISAYTLSLSSPLRRSGPSGR*PSGSSP
Trigger: TGGAGAGGATCCAGAGGGCCAACGACCTGATGGGCC...GCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp GGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCCTGGACATGCGGAGCTaGGAGCTGCTCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GNISLYPISLFPFEEEPSLDMRS*ELLLLR
Trigger: CCTGAGCAAGAGCAGCTCCCAGCTCCGCATGTCCAG...GCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp AGAAGACAGACAGCAGACAAAACACACATGGCTGAGTACAGACACAGCACAGGATGTCGGCCGGGAGGCTaGACATGCGGAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RRQTADKTHMAEYRHSTGCRPGG*TCGAGS
Trigger: GCTCCCAGCTCCGCATGTCCAGCCTCCCGGCCGACA...TCCTGTGCTGTGTCTGTACTCAGCCATGTGTGTTTTGTCTGCTGTCTGTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp TATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGGGTGGAAACGAAGCAATaGCTGCTGTCCTGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: YTLSLSSPLRRSPASYPGVETKQ*LLSCSA
Trigger: TGCCGAGCAGGACAGCAGTCATTGCTTCGTTTCCAC...CCCTGGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp TATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGGCAACTACAGGGCCTTTaGTCACCCACCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: YTLSLSSPLRRSPASYPGQLQGL*SPTTEL
Trigger: CAGCTCTGTGGTGGGTGATCAAAGGCCCTGTAGTTG...CCCTGGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp GTCCATGTCCAAAGCCAATTTGCTGAAAGGCTGCTGGGGTGTTCACTGCCCCAGCCCATGTCTGGGGACTaGAGCTTCTGCACAAGGATG +
Preference number: 4 (lower is better)
Translates to: VHVQSQFAERLLGCSLPQPMSGD*SFCTRM
Trigger: CATCCTTGTGCAGAAGCTGCAGTCCCCAGACATGGG...CTGGGGCAGTGAACACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR GCA 90 bp TCACTGCCCCAGTCTCTCCAAAGCAGGCATGTTTCAAACTCAGTTCACAAGGCCGCTGGGAGCTGCTCTTaGTCAGGATGGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLPQSLQSRHVSNSVHKAAGSCS*SGWTAG
Trigger: CCCAGCTGTCCATCCTGAGCAAGAGCAGCTCCCAGC...GGCCTTGTGAACTGAGTTTGAAACATGCCTGCTTTGGAGAGACTGGGGCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp AGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCATTGCCTCCCATGTCTaGGGACTGCAGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SLYPISLFPFEEEPSFLPIASHV*GLQLLH
Trigger: GTGCAGAAGCTGCAGTCCCCAGACATGGGAGGCAAT...GGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp CTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGCTGCTGAGCCCGCTGTaGCTTGCAGTAGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: LYPISLFPFEEEPSFLPRLLSPL*LAVAFL
Trigger: CAGAAATGCTACTGCAAGCCACAGCGGGCTCAGCAG...CCTGGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp GGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCACTGCTGGCCAGGGATaGATGCCGGTGCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GNISLYPISLFPFEEEPSTAGQG*MPVLEV
Trigger: GACTTCAAGCACCGGCATCCATCCCTGGCCAGCAGT...GCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp GCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTGCTCTTGCTCAGGATaGACAGCTGGGTGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: AISAYTLSLSSPLRRSPACSCSG*TAGCPR
Trigger: ACGGGGGCACCCAGCTGTCCATCCTGAGCAAGAGCA...AGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR CAA 72 bp AACAGAGAGGGGAGAGCGAGGGGCTTTCTGTGGTTGTaGTGGCTGGAGAACAGCTTCTTCAGGCCATCCATG +
Preference number: 4 (lower is better)
Translates to: NREGRARGFLWL*WLENSFFRPSM
Trigger: CATGGATGGCCTGAAGAAGCTGTTCTCCAGCCACAACAACCACAGAAAGCCCCTCGCTCTCCCCTCTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp GGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCACAACTACAGGGCCTTTaGTCACCCACCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GAISAYTLSLSSPLRRSPQLQGL*SPTTEL
Trigger: CAGCTCTGTGGTGGGTGATCAAAGGCCCTGTAGTTG...TGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp GGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCCAACTACAGGGCCTTTaGTCACCCACCACAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GNISLYPISLFPFEEEPSQLQGL*SPTTEL
Trigger: CAGCTCTGTGGTGGGTGATCAAAGGCCCTGTAGTTG...GCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp GGTCTTGAGTCAGGGCACAGTCATGGACGTGGTAAGTTCTTCAGCTATCCCATCGAGCCCGCTGTGGCTTaGAGTAGCATTTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: GLESGHSHGRGKFFSYPIEPAVA*SSISAR
Trigger: GCGTGCAGAAATGCTACTGCAAGCCACAGCGGGCTC...GATGGGATAGCTGAAGAACTTACCACGTCCATGACTGTGCCCTGACTCAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070736.12
CDS-3UTR GCA 90 bp AGGCTGAGAAGGGTCCATGTCCAAAGCCAATTTGCTGAAAGGCTGCTGGGGTGTCTGGCCAGGGATGGATaGCGGTGCTTGAAGTCCATA +
Preference number: 4 (lower is better)
Translates to: RLRRVHVQSQFAERLLGCLARDG*RCLKSI
Trigger: TATGGACTTCAAGCACCGGCATCCATCCCTGGCCAG...ACACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACATGGACCCTTCTCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR GCA 90 bp GGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCCTGGCCAGGGATGGATaGCGGTGCTTGAAGTCCATA +
Preference number: 4 (lower is better)
Translates to: GNISLYPISLFPFEEEPSLARDG*RCLKSI
Trigger: TATGGACTTCAAGCACCGGCATCCATCCCTGGCCAG...GCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp GGTCTTGAGTCAGGGCACAGTCATGGACGTGGTAAGTTCTTCAGCTATCCCATCAGGTCGTTGGCCCTCTaGATCCTCTCCAGGCACATG +
Preference number: 4 (lower is better)
Translates to: GLESGHSHGRGKFFSYPIRSLAL*ILSRHM
Trigger: CATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCT...GATGGGATAGCTGAAGAACTTACCACGTCCATGACTGTGCCCTGACTCAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp AGGCTGAGAAGGGTCCATGTCCAAAGCCAATTTGCTGAAAGGCTGCTGGGGTGTCTGCTGAGCCCGCTGTaGCTTGCAGTAGCATTTCTG +
Preference number: 4 (lower is better)
Translates to: RLRRVHVQSQFAERLLGCLLSPL*LAVAFL
Trigger: CAGAAATGCTACTGCAAGCCACAGCGGGCTCAGCAG...ACACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACATGGACCCTTCTCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070736.12
CDS-3UTR CCA 90 bp GTCCATGTCCAAAGCCAATTTGCTGAAAGGCTGCTGGGGTGTTCACTGCCCCAGGTGGATTCCAAAGAGTaGGATGAGCAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VHVQSQFAERLLGCSLPQVDSKE*DEQQGG
Trigger: TCCACCCTGCTGCTCATCCCACTCTTTGGAATCCAC...CTGGGGCAGTGAACACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp AGATGTAAGCCAAAGGAGCCTCAGGTTGACCTGCTCCAAAGGATGCTCATGACACTGGACATGCGGAGCTaGGAGCTGCTCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RCKPKEPQVDLLQRMLMTLDMRS*ELLLLR
Trigger: CCTGAGCAAGAGCAGCTCCCAGCTCCGCATGTCCAG...TGTCATGAGCATCCTTTGGAGCAGGTCAACCTGAGGCTCCTTTGGCTTACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CAA 72 bp CAAAGCAGGCATGTTTCAAACTCAGTTCACAAGGCCTaGTACCTGGGATCAGGCCATCACCGAGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QSRHVSNSVHKA*YLGSGHHRGWP
Trigger: AGGCCAGCCTCGGTGATGGCCTGATCCCAGGTACAAGGCCTTGTGAACTGAGTTTGAAACATGCCTGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CAA 72 bp CAAGCCTTGCCTGGGGCCCATTCCAAGAGAAGATGGTaGGTGTTTAGACAGAACCCCAGAGGAACACTGGGA +
Preference number: 4 (lower is better)
Translates to: QALPGAHSKRRW*VFRQNPRGTLG
Trigger: TCCCAGTGTTCCTCTGGGGTTCTGTCTAAACACCAACCATCTTCTCTTGGAATGGGCCCCAGGCAAGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CAA 72 bp TCCCTTTTCTGGGTCCAGGCTATATTGCTGCAAGCCTaGCCTGGGGCCCATTCCAAGAGAAGATGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SLFWVQAILLQA*PGAHSKRRWLV
Trigger: CACCAACCATCTTCTCTTGGAATGGGCCCCAGGCAAGGCTTGCAGCAATATAGCCTGGACCCAGAAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp GCAGGCATGTTTCAAACTCAGTTCACAAGGCCTTGTACCTGGGATCAGGCCATCGTGGAAACGAAGCAATaGCTGCTGTCCTGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: AGMFQTQFTRPCTWDQAIVETKQ*LLSCSA
Trigger: TGCCGAGCAGGACAGCAGTCATTGCTTCGTTTCCAC...GATGGCCTGATCCCAGGTACAAGGCCTTGTGAACTGAGTTTGAAACATGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR GCA 90 bp AGGAGGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCATGTCTGGGGACTaGAGCTTCTGCACAAGGATG +
Preference number: 4 (lower is better)
Translates to: RRGNISLYPISLFPFEEEPMSGD*SFCTRM
Trigger: CATCCTTGTGCAGAAGCTGCAGTCCCCAGACATGGG...CTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp AGGAGGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCTGGCCAGGGATGGATaGCGGTGCTTGAAGTCCATA +
Preference number: 4 (lower is better)
Translates to: RRGNISLYPISLFPFEEELARDG*RCLKSI
Trigger: TATGGACTTCAAGCACCGGCATCCATCCCTGGCCAG...CTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp CCCCACTTCTCAGGAATGACCTTCCACAGCTGGGTACCCCTTAAATCTGCTATGATTGCCTCCCATGTCTaGGGACTGCAGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PHFSGMTFHSWVPLKSAMIASHV*GLQLLH
Trigger: GTGCAGAAGCTGCAGTCCCCAGACATGGGAGGCAAT...CATAGCAGATTTAAGGGGTACCCAGCTGTGGAAGGTCATTCCTGAGAAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CAA 72 bp TGTAAGAAGGTCAATAGGGAAGGGATTTATCCAGCCTaGTGCTGCCCCATCACTGCCTACAGCCTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: CKKVNREGIYPA*CCPITAYSLRA
Trigger: GGCTCTCAGGCTGTAGGCAGTGATGGGGCAGCACAAGGCTGGATAAATCCCTTCCCTATTGACCTTCTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
3UTR CAA 72 bp AGTATAGAGTCCCAGAACAGATGGAGAGGGCCAAGTTaGCTAGGGGGTATCCTTAGACCAGGCCAACTCAGC +
Preference number: 4 (lower is better)
Translates to: SIESQNRWRGPS*LGGILRPGQLS
Trigger: GCTGAGTTGGCCTGGTCTAAGGATACCCCCTAGCAAACTTGGCCCTCTCCATCTGTTCTGGGACTCTATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp TGTGGTTGTTGTGGCTGGAGAACAGCTTCTTCAGGCCATCCATGGTGGGCAAGATGGCTTGCTCCTTCTTaGAGATGCAGTCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: CGCCGWRTASSGHPWWARWLAPS*RCSQSA
Trigger: TGCACTCTGACTGCATCTTCAAGAAGGAGCAAGCCA...TCTTGCCCACCATGGATGGCCTGAAGAAGCTGTTCTCCAGCCACAACAACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp GGAGGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCAGGCTTCCAACATGTaGTATTGTCCCACATGCCAG +
Preference number: 4 (lower is better)
Translates to: GGAISAYTLSLSSPLRRSQASNM*YCPTCQ
Trigger: CTGGCATGTGGGACAATATCACATGTTGGAAGCCTG...GCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp AGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCACCATCTCACCTATTTaGGCAGGCTTCCAACATGTG +
Preference number: 4 (lower is better)
Translates to: SLYPISLFPFEEEPSFLPTISPI*AGFQHV
Trigger: CACATGTTGGAAGCCTGCTCAAATAGGTGAGATGGT...GGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp TTCCCTTTTCTGGGTCCAGGCTATATTGCTGCAAGCCTTGCCTGGGGCCCATTCGGTATAGGCCTTCAATaGACAGCCAGAAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: FPFLGPGYIAASLAWGPFGIGLQ*TARSSW
Trigger: CCAACTACTTCTGGCTGTTCATTGAAGGCCTATACC...GAATGGGCCCCAGGCAAGGCTTGCAGCAATATAGCCTGGACCCAGAAAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp CTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGGTGTCCCCCAGCCAATaGTGGTATACCAGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LYPISLFPFEEEPSFLPRVSPSQ*WYTSRN
Trigger: ATTTCTACTGGTATACCATCATTGGCTGGGGGACAC...CCTGGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp GGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCATCCAGGCACATGGCTTaGTCCTTCTTGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: GAISAYTLSLSSPLRRSPSRHMA*SFLKMQ
Trigger: CTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGA...TGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp TCAGCTATCCCATCTCCTTCCAAATTGAATCTGCATTTCTGGCTCTCAGCTCTTACCAGCCATCCTCAGTaGAGTTCCGGCCCACGACCC +
Preference number: 4 (lower is better)
Translates to: SAIPSPSKLNLHFWLSALTSHPQ*SSGPRP
Trigger: GGGTCGTGGGCCGGAACTGCACTGAGGATGGCTGGT...AAGAGCTGAGAGCCAGAAATGCAGATTCAATTTGGAAGGAGATGGGATAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR GCA 90 bp GGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGGGGACTGCAGCTTCTaGACAAGGATGATGATGATG +
Preference number: 4 (lower is better)
Translates to: GAISAYTLSLSSPLRRSPGDCSF*TRMMMM
Trigger: CATCATCATCATCCTTGTGCAGAAGCTGCAGTCCCC...TGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp GAGGCCCTTTCTCTTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCCCATGTCTGGGGACTaGAGCTTCTGCACAAGGATG +
Preference number: 4 (lower is better)
Translates to: EALSLSSFAKDPRAYFTGPMSGD*SFCTRM
Trigger: CATCCTTGTGCAGAAGCTGCAGTCCCCAGACATGGG...ACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAAGAGAAAGGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp GTCCATGTCCAAAGCCAATTTGCTGAAAGGCTGCTGGGGTGTTCACTGCCCCAGACAGCCAGAAGTAGTTaGACACCACGCAGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: VHVQSQFAERLLGCSLPQTARSS*TPRSSE
Trigger: TTCACTACTGCGTGGTGTCCAACTACTTCTGGCTGT...CTGGGGCAGTGAACACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp AGAAGGGTCCATGTCCAAAGCCAATTTGCTGAAAGGCTGCTGGGGTGTTCACTGTGGCTTGCTCCTTCTTaGAGATGCAGTCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RRVHVQSQFAERLLGCSLWLAPS*RCSQSA
Trigger: TGCACTCTGACTGCATCTTCAAGAAGGAGCAAGCCA...CAGTGAACACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACATGGACCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp CTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGAGTGAAAGAAAACCATaGCAGCTTTGCATTCCACGG +
Preference number: 4 (lower is better)
Translates to: LYPISLFPFEEEPSFLPRSERKP*QLCIPR
Trigger: CCGTGGAATGCAAAGCTGTCATGGTTTTCTTTCACT...CCTGGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp GGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCGTGTCCCCCAGCCAATaGTGGTATACCAGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: GNISLYPISLFPFEEEPSVSPSQ*WYTSRN
Trigger: ATTTCTACTGGTATACCATCATTGGCTGGGGGACAC...GCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp GCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCAGGCACATGGCTTaGTCCTTCTTGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: AISAYTLSLSSPLRRSPASRHMA*SFLKMQ
Trigger: CTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGA...AGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR CAA 72 bp CACTCCTGCAAAAGGAACATTGCATTTCACAGCTGCTaGGAGTGTTACATCTGGCTCACACGCAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HSCKRNIAFHSC*ECYIWLTRRAV
Trigger: CACAGCCCTGCGTGTGAGCCAGATGTAACACTCCAAGCAGCTGTGAAATGCAATGTTCCTTTTGCAGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp CTCTCATCATCCAGGCACACAGGAGCTGAGCACCTGGACAACTTAGATGTAAGCACCATCTCACCTATTTaGGCAGGCTTCCAACATGTG +
Preference number: 4 (lower is better)
Translates to: LSSSRHTGAEHLDNLDVSTISPI*AGFQHV
Trigger: CACATGTTGGAAGCCTGCTCAAATAGGTGAGATGGT...GCTTACATCTAAGTTGTCCAGGTGCTCAGCTCCTGTGTGCCTGGATGATGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR GCA 90 bp AATGTCCATGGCCTGAGGCATGATAGCTGCTCTACCAGCTTTGGATACCATGTGGGGGACTGCAGCTTCTaGACAAGGATGATGATGATG +
Preference number: 4 (lower is better)
Translates to: NVHGLRHDSCSTSFGYHVGDCSF*TRMMMM
Trigger: CATCATCATCATCCTTGTGCAGAAGCTGCAGTCCCC...CACATGGTATCCAAAGCTGGTAGAGCAGCTATCATGCCTCAGGCCATGGACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp TCAGAACTCATTGATTTTACTGCAAGGTGGCTGGCCCATTCTAGACATGGCTTTAGGTCGTTGGCCCTCTaGATCCTCTCCAGGCACATG +
Preference number: 4 (lower is better)
Translates to: SELIDFTARWLAHSRHGFRSLAL*ILSRHM
Trigger: CATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCT...AAAGCCATGTCTAGAATGGGCCAGCCACCTTGCAGTAAAATCAATGAGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp AATATCCTAAAACTCCTTCTACTTAATATAACAGCGAGCAAGGCAGCACCCCACGGCCCATCAGGTCGTTaGCCCTCTGGATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NILKLLLLNITASKAAPHGPSGR*PSGSSP
Trigger: TGGAGAGGATCCAGAGGGCCAACGACCTGATGGGCC...GTGGGGTGCTGCCTTGCTCGCTGTTATATTAAGTAGAAGGAGTTTTAGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp AGAATGAGCACACAGCGGTGTTGTTTTCAGAGCTTGCAAACTCACAGGGAGCATGTGGATTCCAAAGAGTaGGATGAGCAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RMSTQRCCFQSLQTHREHVDSKE*DEQQGG
Trigger: TCCACCCTGCTGCTCATCCCACTCTTTGGAATCCAC...ATGCTCCCTGTGAGTTTGCAAGCTCTGAAAACAACACCGCTGTGTGCTCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp AGAAGGGTCCATGTCCAAAGCCAATTTGCTGAAAGGCTGCTGGGGTGTTCACTGAGCCAGAATCCCCTATaGTTTCTGTCATCCAGACTT +
Preference number: 4 (lower is better)
Translates to: RRVHVQSQFAERLLGCSLSQNPL*FLSSRL
Trigger: AAGTCTGGATGACAGAAACCATAGGGGATTCTGGCT...CAGTGAACACCCCAGCAGCCTTTCAGCAAATTGGCTTTGGACATGGACCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp CTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAACACATCTATTGCCTCCCATGTCTaGGGACTGCAGCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LCQRPKSILHWSRTQNTSIASHV*GLQLLH
Trigger: GTGCAGAAGCTGCAGTCCCCAGACATGGGAGGCAAT...AGATGTGTTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp AAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAACACATCTCTAAATCCACTGCTGGCCAGGGATaGATGCCGGTGCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: KTQEHTSLVKNTEHISKSTAGQG*MPVLEV
Trigger: GACTTCAAGCACCGGCATCCATCCCTGGCCAGCAGT...GGATTTAGAGATGTGTTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CAA 72 bp GGCTCAGAAAGCAGCAGGGCTCGGGTTATTCGGTTTTaGCTGTTTTGCAGTAATGCAACCAGAAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: GSESSRARVIRF*LFCSNATRKSQ
Trigger: CTGTGACTTTCTGGTTGCATTACTGCAAAACAGCAAAAACCGAATAACCCGAGCCCTGCTGCTTTCTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp AAATTTGAGGTGTATTTACATATCAAATTGGGCTCAGTGGACCACAGTAGATGGTTGCAAGAGTGCTGCTaGGCCCGCTGTGGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KFEVYLHIKLGSVDHSRWLQECC*ARCGLQ
Trigger: CTGCAAGCCACAGCGGGCTCAGCAGCACTCTTGCAA...CCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp AAATTTGAGGTGTATTTACATATCAAATTGGGCTCAGTGGACCACAGTAGATGGGCTGGGAGCTGCTCTTaGTCAGGATGGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KFEVYLHIKLGSVDHSRWAGSCS*SGWTAG
Trigger: CCCAGCTGTCCATCCTGAGCAAGAGCAGCTCCCAGC...CCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR GCA 90 bp TCAGAACTCATTGATTTTACTGCAAGGTGGCTGGCCCATTCTAGACATGGCTTTCCAGCCGTAAGTAGATaGTCGACTCATTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SELIDFTARWLAHSRHGFPAVSR*STHCLP
Trigger: TGGGAGGCAATGAGTCGAGCATCTACTTACGGCTGG...AAAGCCATGTCTAGAATGGGCCAGCCACCTTGCAGTAAAATCAATGAGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp GAGGCCCTTTCTCTTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTAGCCAGAATCCCCTATaGTTTCTGTCATCCAGACTT +
Preference number: 4 (lower is better)
Translates to: EALSLSSFAKDPRAYFTGSQNPL*FLSSRL
Trigger: AAGTCTGGATGACAGAAACCATAGGGGATTCTGGCT...ACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAAGAGAAAGGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp CACTTCTCAGGAATGACCTTCCACAGCTGGGTACCCCTTAAATCTGCTATGTTCAGTGAAAGAAAACCATaGCAGCTTTGCATTCCACGG +
Preference number: 4 (lower is better)
Translates to: HFSGMTFHSWVPLKSAMFSERKP*QLCIPR
Trigger: CCGTGGAATGCAAAGCTGTCATGGTTTTCTTTCACT...GAACATAGCAGATTTAAGGGGTACCCAGCTGTGGAAGGTCATTCCTGAGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR GCA 90 bp TCAGCTATCCCATCTCCTTCCAAATTGAATCTGCATTTCTGGCTCTCAGCTCTTGGGGACTGCAGCTTCTaGACAAGGATGATGATGATG +
Preference number: 4 (lower is better)
Translates to: SAIPSPSKLNLHFWLSALGDCSF*TRMMMM
Trigger: CATCATCATCATCCTTGTGCAGAAGCTGCAGTCCCC...AAGAGCTGAGAGCCAGAAATGCAGATTCAATTTGGAAGGAGATGGGATAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp TCCTCCAGAAGCACTGTCTCGAATATCCTAAAACTCCTTCTACTTAATATAACATGCTCTTGCTCAGGATaGACAGCTGGGTGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: SSRSTVSNILKLLLLNITCSCSG*TAGCPR
Trigger: ACGGGGGCACCCAGCTGTCCATCCTGAGCAAGAGCA...TGTTATATTAAGTAGAAGGAGTTTTAGGATATTCGAGACAGTGCTTCTGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CAA 72 bp CAGGGTCTTCACTCTAAGAATGAGCACACAGCGGTGTaGTTTTCAGAGCTTGCAAACTCACAGGGAGCATTT +
Preference number: 4 (lower is better)
Translates to: QGLHSKNEHTAV*FSELANSQGAF
Trigger: AAATGCTCCCTGTGAGTTTGCAAGCTCTGAAAACAACACCGCTGTGTGCTCATTCTTAGAGTGAAGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR GCA 90 bp ACACACCCCTTAGATGCTTTTCACAAGGATTCATCTCTGTTTACCTGCCTTAGTTCCAGGCACATGGCTTaGTCCTTCTTGAAGATGCAG +
Preference number: 4 (lower is better)
Translates to: THPLDAFHKDSSLFTCLSSRHMA*SFLKMQ
Trigger: CTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGA...ACTAAGGCAGGTAAACAGAGATGAATCCTTGTGAAAAGCATCTAAGGGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp TTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAAACAGCCAGAAGTAGTTaGACACCACGCAGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: FPALPKTQEHTSLVKNTETARSS*TPRSSE
Trigger: TTCACTACTGCGTGGTGTCCAACTACTTCTGGCTGT...TTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp TCCTCCAGAAGCACTGTCTCGAATATCCTAAAACTCCTTCTACTTAATATAACAACTGCTGGCCAGGGATaGATGCCGGTGCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SSRSTVSNILKLLLLNITTAGQG*MPVLEV
Trigger: GACTTCAAGCACCGGCATCCATCCCTGGCCAGCAGT...TGTTATATTAAGTAGAAGGAGTTTTAGGATATTCGAGACAGTGCTTCTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
3UTR CAA 72 bp AGAAGTGTAGAAATAAAGCCACCACATGATACGGTCTaGAGTCAGGGCACAGTCATGGACGTGGTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RSVEIKPPHDTV*SQGTVMDVVSS
Trigger: AGAACTTACCACGTCCATGACTGTGCCCTGACTCAAGACCGTATCATGTGGTGGCTTTATTTCTACACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp TTTGAGGTGTATTTACATATCAAATTGGGCTCAGTGGACCACAGTAGATGGGACGGTATAGGCCTTCAATaGACAGCCAGAAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: FEVYLHIKLGSVDHSRWDGIGLQ*TARSSW
Trigger: CCAACTACTTCTGGCTGTTCATTGAAGGCCTATACC...GTCCCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR TCA 90 bp AATATCCTAAAACTCCTTCTACTTAATATAACAGCGAGCAAGGCAGCACCCCACGTGTCCCCCAGCCAATaGTGGTATACCAGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: NILKLLLLNITASKAAPHVSPSQ*WYTSRN
Trigger: ATTTCTACTGGTATACCATCATTGGCTGGGGGACAC...GTGGGGTGCTGCCTTGCTCGCTGTTATATTAAGTAGAAGGAGTTTTAGGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CCA 90 bp TTTGAGGTGTATTTACATATCAAATTGGGCTCAGTGGACCACAGTAGATGGGACACAGCCAGAAGTAGTTaGACACCACGCAGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: FEVYLHIKLGSVDHSRWDTARSS*TPRSSE
Trigger: TTCACTACTGCGTGGTGTCCAACTACTTCTGGCTGT...GTCCCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp AAATTTGAGGTGTATTTACATATCAAATTGGGCTCAGTGGACCACAGTAGATGGGTGGATTCCAAAGAGTaGGATGAGCAGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KFEVYLHIKLGSVDHSRWVDSKE*DEQQGG
Trigger: TCCACCCTGCTGCTCATCCCACTCTTTGGAATCCAC...CCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
3UTR CAA 72 bp GTGGTAAGTTCTTCAGCTATCCCATCTCCTTCCAAATaGAATCTGCATTTCTGGCTCTCAGCTCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: VVSSSAIPSPSK*NLHFWLSALRA
Trigger: TGCTCTAAGAGCTGAGAGCCAGAAATGCAGATTCAATTTGGAAGGAGATGGGATAGCTGAAGAACTTACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR TCA 90 bp AAATTTGAGGTGTATTTACATATCAAATTGGGCTCAGTGGACCACAGTAGATGGAGTGAAAGAAAACCATaGCAGCTTTGCATTCCACGG +
Preference number: 4 (lower is better)
Translates to: KFEVYLHIKLGSVDHSRWSERKP*QLCIPR
Trigger: CCGTGGAATGCAAAGCTGTCATGGTTTTCTTTCACT...CCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CCA 90 bp AAATTTGAGGTGTATTTACATATCAAATTGGGCTCAGTGGACCACAGTAGATGGAGCCAGAATCCCCTATaGTTTCTGTCATCCAGACTT +
Preference number: 4 (lower is better)
Translates to: KFEVYLHIKLGSVDHSRWSQNPL*FLSSRL
Trigger: AAGTCTGGATGACAGAAACCATAGGGGATTCTGGCT...CCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CAA 90 bp CAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCCCGCAGCCCCAGCCAGGCCCATCAGGTCGTaGGCCCTCTGGATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: QGEGRGTNMRRHWPAAPARPIRS*ALWILS
Trigger: GGAGAGGATCCAGAGGGCCAACGACCTGATGGGCCT...GGCTGGGGCTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS GCA 90 bp AGTTGTCGGCCGGGAGGCTGGACATGCGGAGCTGGGAGCTGCTCTTaGTCAGGATGGACAGCTGGGTGCCCCCGTTCACTCCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: SCRPGGWTCGAGSCS*SGWTAGCPRSLHCW
Trigger: CCAGCAGTGGAGTGAACGGGGGCACCCAGCTGTCCATCCTGAGCAAGAGCAGCTCCCAGCTCCGCATGTCCAGCCTCCCGGCCGACAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS GCA 90 bp ACATGCGGAGCTGGGAGCTGCTCTTGCTCAGGATGGACAGCTGGGTaGCCCCGTTCACTCCACTGCTGGCCAGGGATGGATGCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: TCGAGSCSCSGWTAG*PRSLHCWPGMDAGA
Trigger: AGCACCGGCATCCATCCCTGGCCAGCAGTGGAGTGAACGGGGGCACCCAGCTGTCCATCCTGAGCAAGAGCAGCTCCCAGCTCCGCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS-3UTR CAA 90 bp CAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCCCGCAGCCCCAGCCACAAGTCTTTCCCTCTaGCTGACGTTCTCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: QGEGRGTNMRRHWPAAPATSLSL*LTFSGE
Trigger: CTCTCCAGAGAACGTCAGCAAGAGGGAAAGACTTGT...GGCTGGGGCTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CAA 90 bp GCCTGCCCAAGGAGAGGGGAGAGGCACAAACATGCGCAGGCACTGGCCCGCAGCTTCCAACATGTGATATaGTCCCACATGCCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: ACPRRGERHKHAQALARSFQHVI*SHMPGQ
Trigger: TTGCCCTGGCATGTGGGACAATATCACATGTTGGAA...GCTGCGGGCCAGTGCCTGCGCATGTTTGTGCCTCTCCCCTCTCCTTGGGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS CCA 90 bp GATGGACAGCTGGGTGCCCCCGTTCACTCCACTGCTGGCCAGGGATaGATGCCGGTGCTTGAAGTCCATAGTGAAGTAACGGTTCACCTT +
Preference number: 5 (lower is better)
Translates to: DGQLGAPVHSTAGQG*MPVLEVHSEVTVHL
Trigger: AAGGTGAACCGTTACTTCACTATGGACTTCAAGCACCGGCATCCATCCCTGGCCAGCAGTGGAGTGAACGGGGGCACCCAGCTGTCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS-3UTR CAA 90 bp CTCTCATCATCCAGGCACACAGGAGCTGAGCACCTGGACAACTTAGATGTAAGCAGGCCCATCAGGTCGTaGGCCCTCTGGATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LSSSRHTGAEHLDNLDVSRPIRS*ALWILS
Trigger: GGAGAGGATCCAGAGGGCCAACGACCTGATGGGCCT...GCTTACATCTAAGTTGTCCAGGTGCTCAGCTCCTGTGTGCCTGGATGATGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS TCA 90 bp CTGGAGAGAAGGCAAATACTGTGTAGTGGATTCCAAAGAGTGGGATaGGCAGCAGGGTGGAGCGGGCCAGCCGTAGGAAAGGGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: LERRQILCSGFQRVG*AAGWSGPAVGKGVN
Trigger: ATTCACCCCCTTTCCTACGGCTGGCCCGCTCCACCCTGCTGCTCATCCCACTCTTTGGAATCCACTACACAGTATTTGCCTTCTCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165857.8
CDS CCA 90 bp CAACCTGGGGAAGACTCATTTAGGCCCATCAGGTCGTTGGCCCTCTaGATCCTCTCCAGGCACATGGCTTGCTCCTTCTTGAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: QPGEDSFRPIRSLAL*ILSRHMACSFLKMQ
Trigger: CTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCTGATGGGCCTAAATGAGTCTTCCCCAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS TCA 90 bp AGCCAGAATCCCCTATGGTTTCTGTCATCCAGACTTGGTCCGGGTTaGAGATCCGGAAGACCTCAGGGCAGCTCACAAGGACCATCTCAC +
Preference number: 5 (lower is better)
Translates to: SQNPLWFLSSRLGPG*RSGRPQGSSQGPSH
Trigger: GTGAGATGGTCCTTGTGAGCTGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGTCTGGATGACAGAAACCATAGGGGATTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
CDS TCA 90 bp ACCAGCCATCCTCAGTGCAGTTCCGGCCCACGACCCCCATGTCTGTaGTCTCCAAGGAATTACTATCAGCAAAGCCAGAATCCCCTATGG +
Preference number: 5 (lower is better)
Translates to: TSHPQCSSGPRPPCL*SPRNYYQQSQNPLW
Trigger: CCATAGGGGATTCTGGCTTTGCTGATAGTAATTCCTTGGAGATCACAGACATGGGGGTCGTGGGCCGGAACTGCACTGAGGATGGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
CDS TCA 90 bp CTGGAGAGAAGGCAAATACTGTGTAGTGGATTCCAAAGAGTGGGATaGGCAGCAGGGTGGAGCGGGCCAGCCGTAAGTAGATGCTCGACT +
Preference number: 5 (lower is better)
Translates to: LERRQILCSGFQRVG*AAGWSGPAVSRCST
Trigger: AGTCGAGCATCTACTTACGGCTGGCCCGCTCCACCCTGCTGCTCATCCCACTCTTTGGAATCCACTACACAGTATTTGCCTTCTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070756.12
ENSMUST00000172084.8
CDS GCA 90 bp CCCATCAGGTCGTTGGCCCTCTGGATCCTCTCCAGGCACATGGCTTaGTCCTTCTTGAAGATGCAGTCAGAGTGCATAGCAATAGCCATA +
Preference number: 5 (lower is better)
Translates to: PIRSLALWILSRHMA*SFLKMQSECIAIAI
Trigger: TATGGCTATTGCTATGCACTCTGACTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS GCA 90 bp CGACCAGCCATCCTCAGTGCAGTTCCGGCCCACGACCCCCATGTCTaGAGAGAACAGAAAACTGTGATCTCCAAGGAATTACTATCAGCA +
Preference number: 5 (lower is better)
Translates to: RPAILSAVPAHDPHV*REQKTVISKELLSA
Trigger: TGCTGATAGTAATTCCTTGGAGATCACAGTTTTCTGTTCTCTGCAGACATGGGGGTCGTGGGCCGGAACTGCACTGAGGATGGCTGGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166962.8
CDS CCA 90 bp CTATCAGCAAAGCCAGAATCCCCTATGGTTTCTGTCATCCAGACTTaGTCCGGGTTGAAGATCCGGAAGACCTCAGGGCAGCTCACAAGG +
Preference number: 5 (lower is better)
Translates to: LSAKPESPMVSVIQT*SGLKIRKTSGQLTR
Trigger: CCTTGTGAGCTGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGTCTGGATGACAGAAACCATAGGGGATTCTGGCTTTGCTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
CDS CCA 90 bp CTGCACGCAGCTGAAGTAGATGCTCGACTCATTGCCTCCCATGTCTaGGGACTGCAGCTTCTGCACAAGGATGATGATGATGCCGATGAA +
Preference number: 5 (lower is better)
Translates to: LHAAEVDARLIASHV*GLQLLHKDDDDADE
Trigger: TTCATCGGCATCATCATCATCCTTGTGCAGAAGCTGCAGTCCCCAGACATGGGAGGCAATGAGTCGAGCATCTACTTCAGCTGCGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070736.12
CDS TCA 90 bp ATCCGGAAGACCTCAGGGCAGCTCACAAGGACCATCTCACCTATTTaGGCAGGCTTCCAACATGTGATATTGTCCCACATGCCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: IRKTSGQLTRTISPI*AGFQHVILSHMPGQ
Trigger: TTGCCCTGGCATGTGGGACAATATCACATGTTGGAAGCCTGCTCAAATAGGTGAGATGGTCCTTGTGAGCTGCCCTGAGGTCTTCCGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS-3UTR CAA 90 bp AGGAGGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCTCCAGGCACATGGCTaGCTCCTTCTTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: RRGNISLYPISLFPFEEELQAHG*LLLEDA
Trigger: TGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAG...CTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CAA 90 bp GGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCACAAGTCTTTCCCTCTaGCTGACGTTCTCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: GNISLYPISLFPFEEEPSTSLSL*LTFSGE
Trigger: CTCTCCAGAGAACGTCAGCAAGAGGGAAAGACTTGT...GCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS GCA 90 bp ATAGTTCTGACATCTTGCAAGAGTGCTGCTGAGCCCGCTGTGGCTTaGAGTAGCATTTCTGCACGCAGAAGTAGATGCTCGACTCATTGC +
Preference number: 5 (lower is better)
Translates to: IVLTSCKSAAEPAVA*SSISARRSRCSTHC
Trigger: GCAATGAGTCGAGCATCTACTTCTGCGTGCAGAAATGCTACTGCAAGCCACAGCGGGCTCAGCAGCACTCTTGCAAGATGTCAGAACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165786.2
CDS CCA 90 bp TTTCTGCACGCAGAAGTAGATGCTCGACTCATTGCCTCCCATGTCTaGGGACTGCAGCTTCTGCACAAGGATGATGATGATGCCGATGAA +
Preference number: 5 (lower is better)
Translates to: FLHAEVDARLIASHV*GLQLLHKDDDDADE
Trigger: TTCATCGGCATCATCATCATCCTTGTGCAGAAGCTGCAGTCCCCAGACATGGGAGGCAATGAGTCGAGCATCTACTTCTGCGTGCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165786.2
CDS-3UTR CAA 90 bp GGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCAACATGTGATATaGTCCCACATGCCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: GNISLYPISLFPFEEEPSFQHVI*SHMPGQ
Trigger: TTGCCCTGGCATGTGGGACAATATCACATGTTGGAA...GCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CAA 90 bp AGAAGACAGACAGCAGACAAAACACACATGGCTGAGTACAGACACAGCACAGGACTCCAGGCACATGGCTaGCTCCTTCTTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: RRQTADKTHMAEYRHSTGLQAHG*LLLEDA
Trigger: TGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAG...TCCTGTGCTGTGTCTGTACTCAGCCATGTGTGTTTTGTCTGCTGTCTGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070756.12
CDS TCA 90 bp AGCTCACAAGGACCATCTCACCTATTTGAGCAGGCTTCCAACATGTaGTATTGTCCCACATGCCAGGGCAACCTGGGGAAGACTCATTTA +
Preference number: 5 (lower is better)
Translates to: SSQGPSHLFEQASNM*YCPTCQGNLGKTHL
Trigger: TAAATGAGTCTTCCCCAGGTTGCCCTGGCATGTGGGACAATATCACATGTTGGAAGCCTGCTCAAATAGGTGAGATGGTCCTTGTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS-3UTR CAA 90 bp AGATGTAAGCCAAAGGAGCCTCAGGTTGACCTGCTCCAAAGGATGCTCATGACATTCCAACATGTGATATaGTCCCACATGCCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: RCKPKEPQVDLLQRMLMTFQHVI*SHMPGQ
Trigger: TTGCCCTGGCATGTGGGACAATATCACATGTTGGAA...TGTCATGAGCATCCTTTGGAGCAGGTCAACCTGAGGCTCCTTTGGCTTACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CAA 90 bp CTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCCCAGCTTCCTACCCAGGTACAAGATCCAGTCTTaGATGAAGACAGAGATAGCT +
Preference number: 5 (lower is better)
Translates to: LYPISLFPFEEEPSFLPRYKIQS*MKTEIA
Trigger: AGCTATCTCTGTCTTCATCAAAGACTGGATCTTGTA...CCTGGGTAGGAAGCTGGGCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS TCA 90 bp ACAGCCAGAAGTAGTTGGACACCACGCAGTAGTGAAAGAAAACCATaGCAGCTTTGCATTCCACGGTGGAAACGAAGCAATGACTGCTGT +
Preference number: 5 (lower is better)
Translates to: TARSSWTPRSSERKP*QLCIPRWKRSNDCC
Trigger: ACAGCAGTCATTGCTTCGTTTCCACCGTGGAATGCAAAGCTGTCATGGTTTTCTTTCACTACTGCGTGGTGTCCAACTACTTCTGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS-3UTR CAA 90 bp TTTCCAGCTTTGCCAAAGACCCAAGAGCATACTTCACTGGTCAAGAACACAGAACTCCAGGCACATGGCTaGCTCCTTCTTGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: FPALPKTQEHTSLVKNTELQAHG*LLLEDA
Trigger: TGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAG...TTCTGTGTTCTTGACCAGTGAAGTATGCTCTTGGGTCTTTGGCAAAGCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CAA 90 bp GGAGGGGCAATATCAGCCTATACCCTATCTCTCTCTTCCCCTTTGAGGAGGAGCTACAAGATCCAGTCTTaGATGAAGACAGAGATAGCT +
Preference number: 5 (lower is better)
Translates to: GGAISAYTLSLSSPLRRSYKIQS*MKTEIA
Trigger: AGCTATCTCTGTCTTCATCAAAGACTGGATCTTGTA...GCTCCTCCTCAAAGGGGAAGAGAGAGATAGGGTATAGGCTGATATTGCCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS-3UTR CAA 90 bp AATATCCTAAAACTCCTTCTACTTAATATAACAGCGAGCAAGGCAGCACCCCACACAAGTCTTTCCCTCTaGCTGACGTTCTCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: NILKLLLLNITASKAAPHTSLSL*LTFSGE
Trigger: CTCTCCAGAGAACGTCAGCAAGAGGGAAAGACTTGT...GTGGGGTGCTGCCTTGCTCGCTGTTATATTAAGTAGAAGGAGTTTTAGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
CDS-3UTR CAA 90 bp TTTGAGGTGTATTTACATATCAAATTGGGCTCAGTGGACCACAGTAGATGGGACTACAAGATCCAGTCTTaGATGAAGACAGAGATAGCT +
Preference number: 5 (lower is better)
Translates to: FEVYLHIKLGSVDHSRWDYKIQS*MKTEIA
Trigger: AGCTATCTCTGTCTTCATCAAAGACTGGATCTTGTA...GTCCCATCTACTGTGGTCCACTGAGCCCAATTTGATATGTAAATACACCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
CDS CAA 72 bp CAGTTCCGGCCCACGACCCCCATGTCTTGGTCCGGGTaGAAGATCCGGAAGACCTCAGGGCAGCTCACAAGG +
Preference number: 6 (lower is better)
Translates to: QFRPTTPMSWSG*KIRKTSGQLTR
Trigger: CCTTGTGAGCTGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGACATGGGGGTCGTGGGCCGGAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172084.8
CDS TCA 72 bp AGTTCCGGCCCACGACCCCCATGTCTTGGTCCGGGTTaGAGATCCGGAAGACCTCAGGGCAGCTCACAAGGA +
Preference number: 6 (lower is better)
Translates to: SSGPRPPCLGPG*RSGRPQGSSQG
Trigger: TCCTTGTGAGCTGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGACATGGGGGTCGTGGGCCGGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172084.8
CDS CCA 72 bp CTGGGTGCCCCCGTTCACTCCACTGCTGGCCAGGGATaGATGCCGGTGCTTGAAGTCCATAGTGAAGTAACG +
Preference number: 6 (lower is better)
Translates to: LGAPVHSTAGQG*MPVLEVHSEVT
Trigger: CGTTACTTCACTATGGACTTCAAGCACCGGCATCCATCCCTGGCCAGCAGTGGAGTGAACGGGGGCACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CAA 90 bp ATGCCAGGGCAACCTGGGGAAGACTCATTTAGGCCCATCAGGTCGTaGGCCCTCTGGATCCTCTCCAGGCACATGGCTTGCTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: MPGQPGEDSFRPIRS*ALWILSRHMACSFL
Trigger: CAAGAAGGAGCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCTGATGGGCCTAAATGAGTCTTCCCCAGGTTGCCCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CAA 72 bp CAACCTGGGGAAGACTCATTTAGGCCCATCAGGTCGTaGGCCCTCTGGATCCTCTCCAGGCACATGGCTTGC +
Preference number: 6 (lower is better)
Translates to: QPGEDSFRPIRS*ALWILSRHMAC
Trigger: GCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCTGATGGGCCTAAATGAGTCTTCCCCAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CCA 72 bp AACCTGGGGAAGACTCATTTAGGCCCATCAGGTCGTTaGCCCTCTGGATCCTCTCCAGGCACATGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: NLGKTHLGPSGR*PSGSSPGTWLA
Trigger: AGCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCTGATGGGCCTAAATGAGTCTTCCCCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS TCA 72 bp CCCCTATGGTTTCTGTCATCCAGACTTGGTCCGGGTTaGAGATCCGGAAGACCTCAGGGCAGCTCACAAGGA +
Preference number: 6 (lower is better)
Translates to: PLWFLSSRLGPG*RSGRPQGSSQG
Trigger: TCCTTGTGAGCTGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGTCTGGATGACAGAAACCATAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
CDS CCA 72 bp GAAGACTCATTTAGGCCCATCAGGTCGTTGGCCCTCTaGATCCTCTCCAGGCACATGGCTTGCTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: EDSFRPIRSLAL*ILSRHMACSFL
Trigger: CAAGAAGGAGCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCTGATGGGCCTAAATGAGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CAA 72 bp GTCGTTGGCCCTCTGGATCCTCTCCAGGCACATGGCTaGCTCCTTCTTGAAGATGCAGTCAGAGTGCATAGC +
Preference number: 6 (lower is better)
Translates to: VVGPLDPLQAHG*LLLEDAVRVHS
Trigger: GCTATGCACTCTGACTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CAA 72 bp TCCCCTATGGTTTCTGTCATCCAGACTTGGTCCGGGTaGAAGATCCGGAAGACCTCAGGGCAGCTCACAAGG +
Preference number: 6 (lower is better)
Translates to: SPMVSVIQTWSG*KIRKTSGQLTR
Trigger: CCTTGTGAGCTGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGTCTGGATGACAGAAACCATAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
CDS CAA 90 bp TCGTTGGCCCTCTGGATCCTCTCCAGGCACATGGCTTGCTCCTTCTaGAAGATGCAGTCAGAGTGCATAGCAATAGCCATAGGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SLALWILSRHMACSF*KMQSECIAIAIGSR
Trigger: CCTGCTGCCTATGGCTATTGCTATGCACTCTGACTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CAA 90 bp GCCCATCAGGTCGTTGGCCCTCTGGATCCTCTCCAGGCACATGGCTaGCTCCTTCTTGAAGATGCAGTCAGAGTGCATAGCAATAGCCAT +
Preference number: 6 (lower is better)
Translates to: AHQVVGPLDPLQAHG*LLLEDAVRVHSNSH
Trigger: ATGGCTATTGCTATGCACTCTGACTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGACCTGATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS GCA 72 bp TCGTTGGCCCTCTGGATCCTCTCCAGGCACATGGCTTaGTCCTTCTTGAAGATGCAGTCAGAGTGCATAGCA +
Preference number: 6 (lower is better)
Translates to: SLALWILSRHMA*SFLKMQSECIA
Trigger: TGCTATGCACTCTGACTGCATCTTCAAGAAGGAGCAAGCCATGTGCCTGGAGAGGATCCAGAGGGCCAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CCA 72 bp AAGCCAGAATCCCCTATGGTTTCTGTCATCCAGACTTaGTCCGGGTTGAAGATCCGGAAGACCTCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: KPESPMVSVIQT*SGLKIRKTSGQ
Trigger: CTGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGTCTGGATGACAGAAACCATAGGGGATTCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
CDS CAA 90 bp GATCCGGAAGACCTCAGGGCAGCTCACAAGGACCATCTCACCTATTaGAGCAGGCTTCCAACATGTGATATTGTCCCACATGCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: DPEDLRAAHKDHLTY*SRLPTCDIVPHARA
Trigger: TGCCCTGGCATGTGGGACAATATCACATGTTGGAAGCCTGCTCAAATAGGTGAGATGGTCCTTGTGAGCTGCCCTGAGGTCTTCCGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CAA 90 bp AAGCCAGAATCCCCTATGGTTTCTGTCATCCAGACTTGGTCCGGGTaGAAGATCCGGAAGACCTCAGGGCAGCTCACAAGGACCATCTCA +
Preference number: 6 (lower is better)
Translates to: KPESPMVSVIQTWSG*KIRKTSGQLTRTIS
Trigger: TGAGATGGTCCTTGTGAGCTGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGTCTGGATGACAGAAACCATAGGGGATTCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
CDS TCA 72 bp GGACCATCTCACCTATTTGAGCAGGCTTCCAACATGTaGTATTGTCCCACATGCCAGGGCAACCTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: GPSHLFEQASNM*YCPTCQGNLGK
Trigger: CTTCCCCAGGTTGCCCTGGCATGTGGGACAATATCACATGTTGGAAGCCTGCTCAAATAGGTGAGATGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS TCA 72 bp CCTCAGTGCAGTTCCGGCCCACGACCCCCATGTCTGTaGTCTCCAAGGAATTACTATCAGCAAAGCCAGAAT +
Preference number: 6 (lower is better)
Translates to: PQCSSGPRPPCL*SPRNYYQQSQN
Trigger: ATTCTGGCTTTGCTGATAGTAATTCCTTGGAGATCACAGACATGGGGGTCGTGGGCCGGAACTGCACTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
CDS CAA 72 bp AAAGCCAGAATCCCCTATGGTTTCTGTCATCCAGACTaGGTCCGGGTTGAAGATCCGGAAGACCTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: KARIPYGFCHPD*VRVEDPEDLRA
Trigger: TGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGTCTGGATGACAGAAACCATAGGGGATTCTGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
CDS CAA 90 bp ACTATCAGCAAAGCCAGAATCCCCTATGGTTTCTGTCATCCAGACTaGGTCCGGGTTGAAGATCCGGAAGACCTCAGGGCAGCTCACAAG +
Preference number: 6 (lower is better)
Translates to: TISKARIPYGFCHPD*VRVEDPEDLRAAHK
Trigger: CTTGTGAGCTGCCCTGAGGTCTTCCGGATCTTCAACCCGGACCAAGTCTGGATGACAGAAACCATAGGGGATTCTGGCTTTGCTGATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
CDS GCA 72 bp CACATGGCTTGCTCCTTCTTGAAGATGCAGTCAGAGTaGATAGCAATAGCCATAGGCAGCAGGAGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: HMACSFLKMQSE*IAIAIGSRRRA
Trigger: TGCTCTCCTCCTGCTGCCTATGGCTATTGCTATGCACTCTGACTGCATCTTCAAGAAGGAGCAAGCCATGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS GCA 72 bp GACTCATTGCCTCCCATGTCTGGGGACTGCAGCTTCTaGACAAGGATGATGATGATGCCGATGAAAAGCACA +
Preference number: 6 (lower is better)
Translates to: DSLPPMSGDCSF*TRMMMMPMKST
Trigger: TGTGCTTTTCATCGGCATCATCATCATCCTTGTGCAGAAGCTGCAGTCCCCAGACATGGGAGGCAATGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CCA 72 bp GCTGAAGTAGATGCTCGACTCATTGCCTCCCATGTCTaGGGACTGCAGCTTCTGCACAAGGATGATGATGAT +
Preference number: 6 (lower is better)
Translates to: AEVDARLIASHV*GLQLLHKDDDD
Trigger: ATCATCATCATCCTTGTGCAGAAGCTGCAGTCCCCAGACATGGGAGGCAATGAGTCGAGCATCTACTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070736.12
CDS CCA 72 bp GCAGAAGTAGATGCTCGACTCATTGCCTCCCATGTCTaGGGACTGCAGCTTCTGCACAAGGATGATGATGAT +
Preference number: 6 (lower is better)
Translates to: AEVDARLIASHV*GLQLLHKDDDD
Trigger: ATCATCATCATCCTTGTGCAGAAGCTGCAGTCCCCAGACATGGGAGGCAATGAGTCGAGCATCTACTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165786.2
CDS CAA 72 bp GAGCCCAGCCCAAGCTCAAACACAAGTCTTTCCCTCTaGCTGACGTTCTCTGGAGAGAAGGCAAATACTGTG +
Preference number: 6 (lower is better)
Translates to: EPSPSSNTSLSL*LTFSGEKANTV
Trigger: CACAGTATTTGCCTTCTCTCCAGAGAACGTCAGCAAGAGGGAAAGACTTGTGTTTGAGCTTGGGCTGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS TCA 72 bp ATGACAGCTTTGCATTCCACGGTGGAAACGAAGCAATaGCTGCTGTCCTGCTCGGCATACAAGATCCAGTCT +
Preference number: 6 (lower is better)
Translates to: MTALHSTVETKQ*LLSCSAYKIQS
Trigger: AGACTGGATCTTGTATGCCGAGCAGGACAGCAGTCATTGCTTCGTTTCCACCGTGGAATGCAAAGCTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CAA 72 bp GACCTCAGGGCAGCTCACAAGGACCATCTCACCTATTaGAGCAGGCTTCCAACATGTGATATTGTCCCACAT +
Preference number: 6 (lower is better)
Translates to: DLRAAHKDHLTY*SRLPTCDIVPH
Trigger: ATGTGGGACAATATCACATGTTGGAAGCCTGCTCAAATAGGTGAGATGGTCCTTGTGAGCTGCCCTGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000166962.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS TCA 72 bp AGTAGTTGGACACCACGCAGTAGTGAAAGAAAACCATaGCAGCTTTGCATTCCACGGTGGAAACGAAGCAAT +
Preference number: 6 (lower is better)
Translates to: SSWTPRSSERKP*QLCIPRWKRSN
Trigger: ATTGCTTCGTTTCCACCGTGGAATGCAAAGCTGTCATGGTTTTCTTTCACTACTGCGTGGTGTCCAACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
ENSMUST00000172084.8
CDS CCA 72 bp CTCAAACACAAGTCTTTCCCTCTTGCTGACGTTCTCTaGAGAGAAGGCAAATACTGTGTAGTGGATTCCAAA +
Preference number: 6 (lower is better)
Translates to: LKHKSFPLADVL*REGKYCVVDSK
Trigger: TTTGGAATCCACTACACAGTATTTGCCTTCTCTCCAGAGAACGTCAGCAAGAGGGAAAGACTTGTGTTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000070736.12
ENSMUST00000070756.12
ENSMUST00000165786.2
ENSMUST00000165857.8
ENSMUST00000167234.8
ENSMUST00000172084.8