Pregenerated sensors for ADCYAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024256Ensembl transcript IDs: ENSMUST00000064775.8, ENSMUST00000234081.2, ENSMUST00000234663.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGAACCTACAGAGGAGCTAGACTTGCCCCCAGATTCTCAGACCTaGGGCAACTCTCAAATCTCAAATCCCCATGTTCTGCCTTTACCA | + |
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Preference number: 1 (lower is better) Translates to: VEPTEELDLPPDSQT*GNSQISNPHVLPLP Trigger: TGGTAAAGGCAGAACATGGGGATTTGAGATTTGAGAGTTGCCTCAGGTCTGAGAATCTGGGGGCAAGTCTAGCTCCTCTGTAGGTTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR GCA 90 bp | GGAAGGAGGGTCTCCAGAAAATCCACAAAGAACAGAGCTGGCTTCTaGAGAACAGTGTTCAAAGGGGAGGATCCTGGCCATTTCACAACA | + |
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Preference number: 1 (lower is better) Translates to: GRRVSRKSTKNRAGF*RTVFKGEDPGHFTT Trigger: TGTTGTGAAATGGCCAGGATCCTCCCCTTTGAACACTGTTCTGCAGAAGCCAGCTCTGTTCTTTGTGGATTTTCTGGAGACCCTCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR CCA 90 bp | GAACAGAGCTGGCTTCTGCAGAACAGTGTTCAAAGGGGAGGATCCTaGCCATTTCACAACATGAAAAGCATGAACAGCACTGGAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: EQSWLLQNSVQRGGS*PFHNMKSMNSTGEK Trigger: TTTTTCTCCAGTGCTGTTCATGCTTTTCATGTTGTGAAATGGCCAGGATCCTCCCCTTTGAACACTGTTCTGCAGAAGCCAGCTCTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR CCA 90 bp | TTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCTaGGAATGCAAATACAGTTGTTTTCTTAGATGCCTGACTTCATAC | + |
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Preference number: 1 (lower is better) Translates to: FSVCNVICGSIHPPT*ECKYSCFLRCLTSY Trigger: GTATGAAGTCAGGCATCTAAGAAAACAACTGTATTTGCATTCCCAGGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCTGTTGGAATTGCCCCTaGAACCAGTGGGACAATGCC | + |
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Preference number: 2 (lower is better) Translates to: LLAFSVCNVICGSIHPPTCWNCP*NQWDNA Trigger: GGCATTGTCCCACTGGTTGCAGGGGCAATTCCAACA...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCCAACCAGTGGGACAATaGCCACTTGAGTTAGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: LLAFSVCNVICGSIHPPTQPVGQ*PLELVR Trigger: CCTAACTAACTCAAGTGGGCATTGTCCCACTGGTTG...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCTCTTCTATCAGGGAATaGCATGAGTTCTGGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: LLAFSVCNVICGSIHPPTSSIRE*HEFWGE Trigger: TTCTCCCCAGAACTCATGTCATTCCCTGATAGAAGA...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCCACAAAGAACAGAGCTaGCTTCTGCAGAACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LLAFSVCNVICGSIHPPTHKEQS*LLQNSV Trigger: AACACTGTTCTGCAGAAGCCAGCTCTGTTCTTTGTG...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGCATGAGGGCAAGGGTAGGAAGGAGGGTCTCCAGAAAATCCACAAAGAACTCTGGGCTGAGAGTCTaGGGAGAGACAAATACACAT | + |
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Preference number: 2 (lower is better) Translates to: QCMRARVGRRVSRKSTKNSGLRV*GETNTH Trigger: ATGTGTATTTGTCTCTCCTCAGACTCTCAGCCCAGA...GTTCTTTGTGGATTTTCTGGAGACCCTCCTTCCTACCCTTGCCCTCATGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGAGGAGCTAGACTTGCCCCCAGATTCTCAGACCTGAGGCAACTCTCAAATCAACCAGTGGGACAATaGCCACTTGAGTTAGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: YRGARLAPRFSDLRQLSNQPVGQ*PLELVR Trigger: CCTAACTAACTCAAGTGGGCATTGTCCCACTGGTTG...ATTTGAGAGTTGCCTCAGGTCTGAGAATCTGGGGGCAAGTCTAGCTCCTCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCATGACTCTAAAACAATaGATGAGGGCAAGGGTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLAFSVCNVICGSIHPPTMTLKQ*MRARVG Trigger: TCCTACCCTTGCCCTCATGCATTGTTTTAGAGTCAT...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTAAAATTTGGGAGGCTGGCTGGTTTGTTGCTGCTTGATCTGGTTAGTAGGTCTGGGCTGAGAGTCTaGGGAGAGACAAATACACAT | + |
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Preference number: 2 (lower is better) Translates to: CLKFGRLAGLLLLDLVSRSGLRV*GETNTH Trigger: ATGTGTATTTGTCTCTCCTCAGACTCTCAGCCCAGA...CCTACTAACCAGATCAAGCAGCAACAAACCAGCCAGCCTCCCAAATTTTAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTAAAATTTGGGAGGCTGGCTGGTTTGTTGCTGCTTGATCTGGTTAGTAGGAATTTCCTTCTGGGCTaGGAGTCTGAGGAGAGACAA | + |
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Preference number: 2 (lower is better) Translates to: CLKFGRLAGLLLLDLVSRNFLLG*ESEERQ Trigger: TTGTCTCTCCTCAGACTCTCAGCCCAGAAGGAAATT...CCTACTAACCAGATCAAGCAGCAACAAACCAGCCAGCCTCCCAAATTTTAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR TCA 90 bp | CTAAAACAATGCATGAGGGCAAGGGTAGGAAGGAGGGTCTCCAGAAAATCCACATATCAGGGAATGACATaGGTTCTGGGGAGAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: LKQCMRARVGRRVSRKSTYQGMT*VLGRST Trigger: TGTGCTTCTCCCCAGAACTCATGTCATTCCCTGATA...TGTGGATTTTCTGGAGACCCTCCTTCCTACCCTTGCCCTCATGCATTGTTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTAAAATTTGGGAGGCTGGCTGGTTTGTTGCTGCTTGATCTGGTTAGTAGGACCTCAGAATTCCCCTaGAGCAGGGCATCATTGTTT | + |
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Preference number: 2 (lower is better) Translates to: CLKFGRLAGLLLLDLVSRTSEFP*SRASLF Trigger: AAACAATGATGCCCTGCTCCAGGGGAATTCTGAGGT...CCTACTAACCAGATCAAGCAGCAACAAACCAGCCAGCCTCCCAAATTTTAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCACAAATGGCCATTATTaGTATCTTCAAGACGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: LLAFSVCNVICGSIHPPTTNGHY*YLQDGC Trigger: ACAACCGTCTTGAAGATACCAATAATGGCCATTTGT...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGAGGAGCTAGACTTGCCCCCAGATTCTCAGACCTGAGGCAACTCTCAAATTCACTTTGTTCCAATTaGCCTAGCCTTAGAATAGTC | + |
|
Preference number: 2 (lower is better) Translates to: YRGARLAPRFSDLRQLSNSLCSN*PSLRIV Trigger: GACTATTCTAAGGCTAGGGCAATTGGAACAAAGTGA...ATTTGAGAGTTGCCTCAGGTCTGAGAATCTGGGGGCAAGTCTAGCTCCTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCAAACTTCACAGTAACTaGTTGCATCAAACAACAACA | + |
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Preference number: 2 (lower is better) Translates to: LLAFSVCNVICGSIHPPTKLHSN*LHQTTT Trigger: TGTTGTTGTTTGATGCAAGCAGTTACTGTGAAGTTT...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCGTTGTTTTTAATTTGTaGCTAAAATTTGGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLAFSVCNVICGSIHPPTVVFNL*LKFGRL Trigger: CAGCCTCCCAAATTTTAGGCACAAATTAAAAACAAC...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CCA 90 bp | TACAGAGGAGCTAGACTTGCCCCCAGATTCTCAGACCTGAGGCAACTCTCAAATGGGAGAAGCACAATTTaGATAGAGCTGTTGTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: YRGARLAPRFSDLRQLSNGRSTI*IELLFN Trigger: ATTAAACAACAGCTCTATCCAAATTGTGCTTCTCCC...ATTTGAGAGTTGCCTCAGGTCTGAGAATCTGGGGGCAAGTCTAGCTCCTCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCACAACATGAAAAGCATGAACAGCACTGGAGAAAAACACATTGTACTTTGCTGTTGGAATTGCCCCTaGAACCAGTGGGACAATGCC | + |
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Preference number: 2 (lower is better) Translates to: FHNMKSMNSTGEKHIVLCCWNCP*NQWDNA Trigger: GGCATTGTCCCACTGGTTGCAGGGGCAATTCCAACA...GCAAAGTACAATGTGTTTTTCTCCAGTGCTGTTCATGCTTTTCATGTTGTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTAAAATTTGGGAGGCTGGCTGGTTTGTTGCTGCTTGATCTGGTTAGTAGGGGGAGAAGCACAATTTaGATAGAGCTGTTGTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: CLKFGRLAGLLLLDLVSRGRSTI*IELLFN Trigger: ATTAAACAACAGCTCTATCCAAATTGTGCTTCTCCC...CCTACTAACCAGATCAAGCAGCAACAAACCAGCCAGCCTCCCAAATTTTAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCTAAAATTTGGGAGGCTGGCTGGTTTGTTGCTGCTTGATCTGGTTAGTAGGCAAACTGAGCAGCATTaGAACACTACACATTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: CLKFGRLAGLLLLDLVSRQTEQH*NTTHSN Trigger: ATTAGAATGTGTAGTGTTCCAATGCTGCTCAGTTTG...CCTACTAACCAGATCAAGCAGCAACAAACCAGCCAGCCTCCCAAATTTTAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR CAA 90 bp | AAGTCATTACCTCAGAATTCCCCTGGAGCAGGGCATCATTGTTTTTaGTACAAATGGCCATTATTGGTATCTTCAAGACGGTTGTGGATA | + |
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Preference number: 2 (lower is better) Translates to: KSLPQNSPGAGHHCF*YKWPLLVSSRRLWI Trigger: TATCCACAACCGTCTTGAAGATACCAATAATGGCCATTTGTACAAAAAACAATGATGCCCTGCTCCAGGGGAATTCTGAGGTAATGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCACAACATGAAAAGCATGAACAGCACTGGAGAAAAACACATTGTACTTTGCAATTTCCTTCTGGGCTaGGAGTCTGAGGAGAGACAA | + |
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Preference number: 2 (lower is better) Translates to: FHNMKSMNSTGEKHIVLCNFLLG*ESEERQ Trigger: TTGTCTCTCCTCAGACTCTCAGCCCAGAAGGAAATT...GCAAAGTACAATGTGTTTTTCTCCAGTGCTGTTCATGCTTTTCATGTTGTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR TCA 72 bp | ACAGAGGAGCTAGACTTGCCCCCAGATTCTCAGACCTaGGGCAACTCTCAAATCTCAAATCCCCATGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: TEELDLPPDSQT*GNSQISNPHVL Trigger: CAGAACATGGGGATTTGAGATTTGAGAGTTGCCTCAGGTCTGAGAATCTGGGGGCAAGTCTAGCTCCTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR GCA 72 bp | AAATTGTTGGAATTGCCCCTGCAACCAGTGGGACAATaGCCACTTGAGTTAGTTAGGCTGGGGTTCAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: KLLELPLQPVGQ*PLELVRLGFKQ Trigger: CTGCTTGAACCCCAGCCTAACTAACTCAAGTGGGCATTGTCCCACTGGTTGCAGGGGCAATTCCAACAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR GCA 72 bp | GTCTCCAGAAAATCCACAAAGAACAGAGCTGGCTTCTaGAGAACAGTGTTCAAAGGGGAGGATCCTGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: VSRKSTKNRAGF*RTVFKGEDPGH Trigger: ATGGCCAGGATCCTCCCCTTTGAACACTGTTCTGCAGAAGCCAGCTCTGTTCTTTGTGGATTTTCTGGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR CCA 72 bp | TGGCTTCTGCAGAACAGTGTTCAAAGGGGAGGATCCTaGCCATTTCACAACATGAAAAGCATGAACAGCACT | + |
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Preference number: 3 (lower is better) Translates to: WLLQNSVQRGGS*PFHNMKSMNST Trigger: AGTGCTGTTCATGCTTTTCATGTTGTGAAATGGCCAGGATCCTCCCCTTTGAACACTGTTCTGCAGAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CAA 90 bp | CTAAAACAATGCATGAGGGCAAGGGTAGGAAGGAGGGTCTCCAGAAAATCCACAGCGAATTTTCAATCCTaGTGCACCCATCTTAATTGC | + |
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Preference number: 3 (lower is better) Translates to: LKQCMRARVGRRVSRKSTANFQS*CTHLNC Trigger: GCAATTAAGATGGGTGCACAAGGATTGAAAATTCGC...TGTGGATTTTCTGGAGACCCTCCTTCCTACCCTTGCCCTCATGCATTGTTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCTAAAATTTGGGAGGCTGGCTGGTTTGTTGCTGCTTGATCTGGTTAGTAGGGCGAATTTTCAATCCTaGTGCACCCATCTTAATTGC | + |
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Preference number: 3 (lower is better) Translates to: CLKFGRLAGLLLLDLVSRANFQS*CTHLNC Trigger: GCAATTAAGATGGGTGCACAAGGATTGAAAATTCGC...CCTACTAACCAGATCAAGCAGCAACAAACCAGCCAGCCTCCCAAATTTTAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGCAAATGACTCTAAAACAATGCATGAGGGCAAGGGTAGGAAGGAGGGTCTCTCAAAGAAACTGAAATaGTTGGAATTGCCCCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: MANDSKTMHEGKGRKEGLSKKLK*LELPLQ Trigger: TTGCAGGGGCAATTCCAACAATTTCAGTTTCTTTGA...GAGACCCTCCTTCCTACCCTTGCCCTCATGCATTGTTTTAGAGTCATTTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCTAAAATTTGGGAGGCTGGCTGGTTTGTTGCTGCTTGATCTGGTTAGTAGGGACTGGTCAGTCAATTaGGAAAACGACTTTTCATTT | + |
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Preference number: 3 (lower is better) Translates to: CLKFGRLAGLLLLDLVSRDWSVN*ENDFSF Trigger: AAATGAAAAGTCGTTTTCCAAATTGACTGACCAGTC...CCTACTAACCAGATCAAGCAGCAACAAACCAGCCAGCCTCCCAAATTTTAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR CCA 72 bp | AATTTGGGAGGCTGGCTGGTTTGTTGCTGCTTGATCTaGTTAGTAGGTGAAGGTTCTTTTGTTTATCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: NLGGWLVCCCLI*LVGEGSFVYQE Trigger: TTCTTGATAAACAAAAGAACCTTCACCTACTAACCAGATCAAGCAGCAACAAACCAGCCAGCCTCCCAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCAAACTGAGCAGCATTGGAACACTACACATTCTAATATGACAAAGATTGGTGACTGGTCAGTCAATTaGGAAAACGACTTTTCATTT | + |
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Preference number: 3 (lower is better) Translates to: SQTEQHWNTTHSNMTKIGDWSVN*ENDFSF Trigger: AAATGAAAAGTCGTTTTCCAAATTGACTGACCAGTC...ACCAATCTTTGTCATATTAGAATGTGTAGTGTTCCAATGCTGCTCAGTTTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR TCA 72 bp | AAGATAGTACTCATACATATGAAGATGGGGTTTAAATaGTTTATCAGTCAAACTGAGCAGCATTGGAACACT | + |
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Preference number: 3 (lower is better) Translates to: KIVLIHMKMGFK*FISQTEQHWNT Trigger: AGTGTTCCAATGCTGCTCAGTTTGACTGATAAATCATTTAAACCCCATCTTCATATGTATGAGTACTATCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR TCA 90 bp | CAATGCATGAGGGCAAGGGTAGGAAGGAGGGTCTCCAGAAAATCCACAAAGAACGAGTCCGGCGGCAGGTaGACAGGAGACACTGCTATG | + |
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Preference number: 4 (lower is better) Translates to: QCMRARVGRRVSRKSTKNESGGR*TGDTAM Trigger: CATAGCAGTGTCTCCTGTTCACCTGCCGCCGGACTC...GTTCTTTGTGGATTTTCTGGAGACCCTCCTTCCTACCCTTGCCCTCATGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR GCA 90 bp | TACAGAGGAGCTAGACTTGCCCCCAGATTCTCAGACCTGAGGCAACTCTCAAATCAGCAGGGCCAGCCTTaGTCCGCTACACATGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: YRGARLAPRFSDLRQLSNQQGQP*SATHGH Trigger: ATGACCATGTGTAGCGGAGCAAGGCTGGCCCTGCTG...ATTTGAGAGTTGCCTCAGGTCTGAGAATCTGGGGGCAAGTCTAGCTCCTCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR TCA 90 bp | CTAAAACAATGCATGAGGGCAAGGGTAGGAAGGAGGGTCTCCAGAAAATCCACAGGCTGTAGCTATCTGTaGAGATGCCGTCCGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LKQCMRARVGRRVSRKSTGCSYL*RCRPSG Trigger: GCCACTCGGACGGCATCTTCACAGATAGCTACAGCC...TGTGGATTTTCTGGAGACCCTCCTTCCTACCCTTGCCCTCATGCATTGTTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR CCA 90 bp | CTAAAACAATGCATGAGGGCAAGGGTAGGAAGGAGGGTCTCCAGAAAATCCACAACTGCAGGTACTTCCTaGCGGACAGCTGGTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LKQCMRARVGRRVSRKSTTAGTS*RTAGPR Trigger: TCTTGGACCAGCTGTCCGCCAGGAAGTACCTGCAGT...TGTGGATTTTCTGGAGACCCTCCTTCCTACCCTTGCCCTCATGCATTGTTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR CCA 90 bp | TGCCTAAAATTTGGGAGGCTGGCTGGTTTGTTGCTGCTTGATCTGGTTAGTAGGACTGCAGGTACTTCCTaGCGGACAGCTGGTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: CLKFGRLAGLLLLDLVSRTAGTS*RTAGPR Trigger: TCTTGGACCAGCTGTCCGCCAGGAAGTACCTGCAGT...CCTACTAACCAGATCAAGCAGCAACAAACCAGCCAGCCTCCCAAATTTTAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR GCA 90 bp | TGTTTGGAAAGAACACGAGTGATGACTGGTCAGTCAATTTGGAAAACGACTTTTCAGCAGGGCCAGCCTTaGTCCGCTACACATGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: CLERTRVMTGQSIWKTTFQQGQP*SATHGH Trigger: ATGACCATGTGTAGCGGAGCAAGGCTGGCCCTGCTG...AAAAGTCGTTTTCCAAATTGACTGACCAGTCATCACTCGTGTTCTTTCCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR TCA 90 bp | GTACAAATGGCCATTATTGGTATCTTCAAGACGGTTGTGGATAAAAATACTATCGAGTCCGGCGGCAGGTaGACAGGAGACACTGCTATG | + |
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Preference number: 4 (lower is better) Translates to: VQMAIIGIFKTVVDKNTIESGGR*TGDTAM Trigger: CATAGCAGTGTCTCCTGTTCACCTGCCGCCGGACTC...GATAGTATTTTTATCCACAACCGTCTTGAAGATACCAATAATGGCCATTTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR GCA 90 bp | CTAAAACAATGCATGAGGGCAAGGGTAGGAAGGAGGGTCTCCAGAAAATCCACACAGGAGACACTGCTATaGATTATTATCCCATACACC | + |
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Preference number: 4 (lower is better) Translates to: LKQCMRARVGRRVSRKSTQETLL*IIIPYT Trigger: GGTGTATGGGATAATAATGCATAGCAGTGTCTCCTG...TGTGGATTTTCTGGAGACCCTCCTTCCTACCCTTGCCCTCATGCATTGTTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR TCA 90 bp | GTACAAATGGCCATTATTGGTATCTTCAAGACGGTTGTGGATAAAAATACTATCGGCTGTAGCTATCTGTaGAGATGCCGTCCGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VQMAIIGIFKTVVDKNTIGCSYL*RCRPSG Trigger: GCCACTCGGACGGCATCTTCACAGATAGCTACAGCC...GATAGTATTTTTATCCACAACCGTCTTGAAGATACCAATAATGGCCATTTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| 3UTR CAA 72 bp | CCTCAGAATTCCCCTGGAGCAGGGCATCATTGTTTTTaGTACAAATGGCCATTATTGGTATCTTCAAGACGG | + |
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Preference number: 4 (lower is better) Translates to: PQNSPGAGHHCF*YKWPLLVSSRR Trigger: CCGTCTTGAAGATACCAATAATGGCCATTTGTACAAAAAACAATGATGCCCTGCTCCAGGGGAATTCTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR GCA 90 bp | AGTCAAACTGAGCAGCATTGGAACACTACACATTCTAATATGACAAAGATTGGTCAGGAGACACTGCTATaGATTATTATCCCATACACC | + |
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Preference number: 4 (lower is better) Translates to: SQTEQHWNTTHSNMTKIGQETLL*IIIPYT Trigger: GGTGTATGGGATAATAATGCATAGCAGTGTCTCCTG...ACCAATCTTTGTCATATTAGAATGTGTAGTGTTCCAATGCTGCTCAGTTTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR GCA 90 bp | TTTCACAACATGAAAAGCATGAACAGCACTGGAGAAAAACACATTGTACTTTGCGTGAACAGGAGACACTaGTATGCATTATTATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: FHNMKSMNSTGEKHIVLCVNRRH*YALLSH Trigger: ATGGGATAATAATGCATAGCAGTGTCTCCTGTTCAC...GCAAAGTACAATGTGTTTTTCTCCAGTGCTGTTCATGCTTTTCATGTTGTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS CCA 90 bp | ATAGGCTTCGTTAAGGATTTCGTGGGCGACATCTCTCCTGTCCGCTaGATAGTAAAGGGCGTAAGCGTCACGCAGCGCGGAGGCGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: IGFVKDFVGDISPVR*IVKGVSVTQRGGGA Trigger: AGCCCCGCCTCCGCGCTGCGTGACGCTTACGCCCTTTACTATCCAGCGGACAGGAGAGATGTCGCCCACGAAATCCTTAACGAAGCCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS GCA 90 bp | CCAGGGAAGCTGAGTCCGGCGGCAGGTGAACAGGAGACACTGCTATaGATTATTATCCCATACACCAGCAGGGCCAGCCTTGCTCCGCTA | + |
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Preference number: 5 (lower is better) Translates to: PGKLSPAAGEQETLL*IIIPYTSRASLAPL Trigger: TAGCGGAGCAAGGCTGGCCCTGCTGGTGTATGGGATAATAATGCATAGCAGTGTCTCCTGTTCACCTGCCGCCGGACTCAGCTTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 ENSMUST00000234663.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCCCAGCAGGGCCAGCCTaGCTCCGCTACACATGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LLAFSVCNVICGSIHPPTPAGPA*LRYTWS Trigger: TGACCATGTGTAGCGGAGCAAGGCTGGCCCTGCTGG...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS TCA 90 bp | CTCGTCTTCTGGTCTGATCCCAGGGAAGCTGAGTCCGGCGGCAGGTaGACAGGAGACACTGCTATGCATTATTATCCCATACACCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LVFWSDPREAESGGR*TGDTAMHYYPIHQQ Trigger: CTGCTGGTGTATGGGATAATAATGCATAGCAGTGTCTCCTGTTCACCTGCCGCCGGACTCAGCTTCCCTGGGATCAGACCAGAAGACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 ENSMUST00000234663.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCCCAGTCATAGAAGTCTaGCAGCGGGTTTCCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LLAFSVCNVICGSIHPPTPVIEV*QRVSVL Trigger: CAGGACGGAAACCCGCTGCAAGACTTCTATGACTGG...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTGCTTTCTCTGTTTGCAATGTGATCTGCGGCAGCATCCATCCACCCACCGCTATTCGGCGTCCTTaGTTTTTAACCCTCTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: LLAFSVCNVICGSIHPPTAIRRP*FLTLCL Trigger: TAAACAGAGGGTTAAAAACAAAGGACGCCGAATAGC...GGTGGGTGGATGGATGCTGCCGCAGATCACATTGCAAACAGAGAAAGCAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR CAA 90 bp | GTACAAATGGCCATTATTGGTATCTTCAAGACGGTTGTGGATAAAAATACTATCCCAGCAGGGCCAGCCTaGCTCCGCTACACATGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VQMAIIGIFKTVVDKNTIPAGPA*LRYTWS Trigger: TGACCATGTGTAGCGGAGCAAGGCTGGCCCTGCTGG...GATAGTATTTTTATCCACAACCGTCTTGAAGATACCAATAATGGCCATTTGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR CAA 90 bp | TACAGAGGAGCTAGACTTGCCCCCAGATTCTCAGACCTGAGGCAACTCTCAAATGCTATTCGGCGTCCTTaGTTTTTAACCCTCTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: YRGARLAPRFSDLRQLSNAIRRP*FLTLCL Trigger: TAAACAGAGGGTTAAAAACAAAGGACGCCGAATAGC...ATTTGAGAGTTGCCTCAGGTCTGAGAATCTGGGGGCAAGTCTAGCTCCTCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR CAA 90 bp | TGTTTGGAAAGAACACGAGTGATGACTGGTCAGTCAATTTGGAAAACGACTTTTCCAGTCATAGAAGTCTaGCAGCGGGTTTCCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: CLERTRVMTGQSIWKTTFPVIEV*QRVSVL Trigger: CAGGACGGAAACCCGCTGCAAGACTTCTATGACTGG...AAAAGTCGTTTTCCAAATTGACTGACCAGTCATCACTCGTGTTCTTTCCAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS-3UTR CAA 90 bp | TTTCACAACATGAAAAGCATGAACAGCACTGGAGAAAAACACATTGTACTTTGCTTTCTTGACAGCCATTaGTTTTCGGTAGCGGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: FHNMKSMNSTGEKHIVLCFLDSH*FSVAAV Trigger: TACAGCCGCTACCGAAAACAAATGGCTGTCAAGAAA...GCAAAGTACAATGTGTTTTTCTCCAGTGCTGTTCATGCTTTTCATGTTGTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS GCA 72 bp | CCTAGGTTCTCCCCCGCGCCCCTGGCCACGACCGACTaGAGGTACTTCCTGGCGGACAGCTGGTCCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: PRFSPAPLATTD*RYFLADSWSKT Trigger: AGTCTTGGACCAGCTGTCCGCCAGGAAGTACCTGCAGTCGGTCGTGGCCAGGGGCGCGGGGGAGAACCTAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS CAA 90 bp | GGAGGCGGGGCTCCCCACGCCGGGAGGGTCCCAGTCATAGAAGTCTaGCAGCGGGTTTCCGTCCTGGTCGTAAGCCTCGTCTTCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GGGAPHAGRVPVIEV*QRVSVLVVSLVFWS Trigger: AGACCAGAAGACGAGGCTTACGACCAGGACGGAAACCCGCTGCAAGACTTCTATGACTGGGACCCTCCCGGCGTGGGGAGCCCCGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 ENSMUST00000234663.2 |
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| CDS CAA 72 bp | GCTCCCCACGCCGGGAGGGTCCCAGTCATAGAAGTCTaGCAGCGGGTTTCCGTCCTGGTCGTAAGCCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: APHAGRVPVIEV*QRVSVLVVSLV Trigger: GACGAGGCTTACGACCAGGACGGAAACCCGCTGCAAGACTTCTATGACTGGGACCCTCCCGGCGTGGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 ENSMUST00000234663.2 |
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| CDS CCA 72 bp | CCGCGCCCCTGGCCACGACCGACTGCAGGTACTTCCTaGCGGACAGCTGGTCCAAGACTTTTCGATAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PRPWPRPTAGTS*RTAGPRLFDRL Trigger: AAGCCTATCGAAAAGTCTTGGACCAGCTGTCCGCCAGGAAGTACCTGCAGTCGGTCGTGGCCAGGGGCGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS CCA 72 bp | GTTAAGGATTTCGTGGGCGACATCTCTCCTGTCCGCTaGATAGTAAAGGGCGTAAGCGTCACGCAGCGCGGA | + |
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Preference number: 6 (lower is better) Translates to: VKDFVGDISPVR*IVKGVSVTQRG Trigger: TCCGCGCTGCGTGACGCTTACGCCCTTTACTATCCAGCGGACAGGAGAGATGTCGCCCACGAAATCCTTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 |
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| CDS GCA 72 bp | CTGAGTCCGGCGGCAGGTGAACAGGAGACACTGCTATaGATTATTATCCCATACACCAGCAGGGCCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LSPAAGEQETLL*IIIPYTSRASL Trigger: AAGGCTGGCCCTGCTGGTGTATGGGATAATAATGCATAGCAGTGTCTCCTGTTCACCTGCCGCCGGACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 ENSMUST00000234663.2 |
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| CDS TCA 72 bp | TGGTCTGATCCCAGGGAAGCTGAGTCCGGCGGCAGGTaGACAGGAGACACTGCTATGCATTATTATCCCATA | + |
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Preference number: 6 (lower is better) Translates to: WSDPREAESGGR*TGDTAMHYYPI Trigger: TATGGGATAATAATGCATAGCAGTGTCTCCTGTTCACCTGCCGCCGGACTCAGCTTCCCTGGGATCAGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064775.8 ENSMUST00000234081.2 ENSMUST00000234663.2 |
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