RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCY8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022376

Ensembl transcript IDs: ENSMUST00000023007.7, ENSMUST00000228014.2

Found 385 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTCTCCCTCTCTCTCTCTCTGCATCTGTCTGTCTGTCTGTGTCTaGGTTTATGCCATGTGTGTACAAATGCCATTGGAGGCCAGAAGA +
Preference number: 1 (lower is better)
Translates to: LSPSLSLCICLSVCV*VYAMCVQMPLEARR
Trigger: TCTTCTGGCCTCCAATGGCATTTGTACACACATGGCATAAACTCAGACACAGACAGACAGACAGATGCAGAGAGAGAGAGAGGGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR GCA 90 bp TCTGTCTGTCTGTCTGTGTCTGAGTTTATGCCATGTGTGTACAAATaGCATTGGAGGCCAGAAGAAGGCATTGTATACCCCTGGAACTGG +
Preference number: 1 (lower is better)
Translates to: SVCLSVSEFMPCVYK*HWRPEEGIVYPWNW
Trigger: CCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGCATTTGTACACACATGGCATAAACTCAGACACAGACAGACAGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR GCA 90 bp CTCTCTCTCTCTCTGCATCTGTCTGTCTGTCTGTGTCTGAGTTTATaGCATGTGTGTACAAATGCCATTGGAGGCCAGAAGAAGGCATTG +
Preference number: 1 (lower is better)
Translates to: LSLSLHLSVCLCLSL*HVCTNAIGGQKKAL
Trigger: CAATGCCTTCTTCTGGCCTCCAATGGCATTTGTACACACATGGCATAAACTCAGACACAGACAGACAGACAGATGCAGAGAGAGAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACGGGGAGATGAAAGGGTaGAGCTTTCTGGGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDGEMKG*SFLGLL
Trigger: CAGGAGACCCAGAAAGCTCCACCCTTTCATCTCCCC...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR TCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACCGATACTCAGAGGGTTaGATGATGGATCCCAGGTCA +
Preference number: 2 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDRYSEG*MMDPRS
Trigger: TGACCTGGGATCCATCATTCAACCCTCTGAGTATCG...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 90 bp CACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATaGTGGAGTGGCCTCTTGACACAGTTCATTCCTTCTCTATGTCCC +
Preference number: 2 (lower is better)
Translates to: HMADVTLGVIETRFR*WSGLLTQFIPSLCP
Trigger: GGGACATAGAGAAGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR TCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTCTGTCTGTCTGTGTCTaGGTTTATGCCATGTGTGTA +
Preference number: 2 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLALSVCV*VYAMCV
Trigger: TACACACATGGCATAAACTCAGACACAGACAGACAG...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCGTGAGCTACCTGACATaGTGCTGGGAACCAGACATA +
Preference number: 2 (lower is better)
Translates to: FMREENVMQLPQGTSFSLVSYLT*CWEPDI
Trigger: TATGTCTGGTTCCCAGCACCATGTCAGGTAGCTCAC...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR TCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACCTCCTCTATATCAGCTaGATGAACGTACAGGGGTTA +
Preference number: 2 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDLLYIS*MNVQGL
Trigger: TAACCCCTGTACGTTCATTCAGCTGATATAGAGGAG...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR GCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTCTGTGTCTGAGTTTATaGCATGTGTGTACAAATGCC +
Preference number: 2 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLALCLSL*HVCTNA
Trigger: GGCATTTGTACACACATGGCATAAACTCAGACACAG...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACGGAGTTTGCACTTGCTaGCCCTTTTCTTCATATCAC +
Preference number: 2 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDGVCTC*PFSSYH
Trigger: GTGATATGAAGAAAAGGGCCAGCAAGTGCAAACTCC...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGAACTTGGTGGGATTCTTaGAACTTAGCCCCTTGCTAC +
Preference number: 2 (lower is better)
Translates to: GLCHMADVTLGVIETRFRTWWDS*NLAPCY
Trigger: GTAGCAAGGGGCTAAGTTCCAAGAATCCCACCAAGT...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR TCA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCCTGTCTGTCTGTGTCTaGGTTTATGCCATGTGTGTA +
Preference number: 2 (lower is better)
Translates to: LDTVLIQPRSICPGNGAALSVCV*VYAMCV
Trigger: TACACACATGGCATAAACTCAGACACAGACAGACAG...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR GCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGAAGGCTCAATGCAGGATaGTCCTCTATATCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: GLCHMADVTLGVIETRFRRLNAG*SSISAE
Trigger: TTCAGCTGATATAGAGGAGCATCCTGCATTGAGCCT...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGAGTATACCCCTGGAACTaGATTACAGACAGTTGTGAG +
Preference number: 2 (lower is better)
Translates to: GLCHMADVTLGVIETRFRVYPWN*ITDSCE
Trigger: CTCACAACTGTCTGTAATCCAGTTCCAGGGGTATAC...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCGTGTACAAATGCCATTaGAGGCCAGAAGAAGGCATT +
Preference number: 2 (lower is better)
Translates to: FMREENVMQLPQGTSFSLVYKCH*RPEEGI
Trigger: AATGCCTTCTTCTGGCCTCCAATGGCATTTGTACAC...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 90 bp ACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTaGACACAGTTCATTCCTTCTCTATGTCCCCTTACATCACAGAAC +
Preference number: 2 (lower is better)
Translates to: TLGVIETRFRLWSGL*TQFIPSLCPLTSQN
Trigger: GTTCTGTGATGTAAGGGGACATAGAGAAGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR GCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTCCATGTGTGTACAAATaGCATTGGAGGCCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSPCVYK*HWRPEE
Trigger: TTCTTCTGGCCTCCAATGGCATTTGTACACACATGG...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTCTAAGTCAGACTTTTaGCCTCATAGATCTTGTGTA +
Preference number: 2 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLSKSDF*PHRSCV
Trigger: TACACAAGATCTATGAGGCCAAAAGTCTGACTTAGA...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGGTGAGCTACCTGACATaGTGCTGGGAACCAGACATA +
Preference number: 2 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEVSYLT*CWEPDI
Trigger: TATGTCTGGTTCCCAGCACCATGTCAGGTAGCTCAC...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTGTGTACAAATGCCATTaGAGGCCAGAAGAAGGCATT +
Preference number: 2 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSVYKCH*RPEEGI
Trigger: AATGCCTTCTTCTGGCCTCCAATGGCATTTGTACAC...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR TCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGTGTGGAGTGGCCTCTTaGCACAGTTCATTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLCGVAS*HSSFLL
Trigger: GAGAAGGAATGAACTGTGTCAAGAGGCCACTCCACA...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR TCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGAAACGCGCCTACACCTaGTTTGGGCAATCCCTGAAT +
Preference number: 2 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLKRAYT*FGQSLN
Trigger: ATTCAGGGATTGCCCAAATCAGGTGTAGGCGCGTTT...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGTCGCCAGGATTTATCTaGGTCATGACACAGATTAGG +
Preference number: 2 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKESPGFI*VMTQIR
Trigger: CCTAATCTGTGTCATGACCCAGATAAATCCTGGCGA...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGGGAGTTTGCACTTGCTaGCCCTTTTCTTCATATCAC +
Preference number: 2 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEGVCTC*PFSSYH
Trigger: GTGATATGAAGAAAAGGGCCAGCAAGTGCAAACTCC...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGACAAGATTCAGATTGTaGAGTGGCCTCTTGACACAG +
Preference number: 2 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKETRFRL*SGLLTQ
Trigger: CTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGT...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR TCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGCCACAGTGCTGTGTCTaGCTCTTTGGTGTAGTTATG +
Preference number: 2 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLPQCCV*LFGVVM
Trigger: CATAACTACACCAAAGAGTCAGACACAGCACTGTGG...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR GCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGAGGCTCAATGCAGGATaGTCCTCTATATCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLRLNAG*SSISAE
Trigger: TTCAGCTGATATAGAGGAGCATCCTGCATTGAGCCT...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 90 bp AGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTaGTGTTTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCA +
Preference number: 2 (lower is better)
Translates to: SRNHRGHLLCDSIIG*CLDTVLIQPRSICP
Trigger: TGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAAACACAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR GCA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGCCATGTGTGTACAAATaGCATTGGAGGCCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWPCVYK*HWRPEE
Trigger: TTCTTCTGGCCTCCAATGGCATTTGTACACACATGG...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 90 bp CATGTTCTGGATAAAGTCTCTCAGCGACAACAAATCAATCTTTTATaGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGG +
Preference number: 2 (lower is better)
Translates to: HVLDKVSQRQQINLL*CFSCYTEWSLVKAW
Trigger: CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATTGATTTGTTGTCGCTGAGAGACTTTATCCAGAACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CCA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGTCTAAGTCAGACTTTTaGCCTCATAGATCTTGTGTA +
Preference number: 2 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWSKSDF*PHRSCV
Trigger: TACACAAGATCTATGAGGCCAAAAGTCTGACTTAGA...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR TCA 72 bp AAGACCTCCCCAACACAACACAAACGCGCCTACACCTaGTTTGGGCAATCCCTGAATCGAGACTCCTTTCCT +
Preference number: 3 (lower is better)
Translates to: KTSPTQHKRAYT*FGQSLNRDSFP
Trigger: AGGAAAGGAGTCTCGATTCAGGGATTGCCCAAATCAGGTGTAGGCGCGTTTGTGTTGTGTTGGGGAGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGAGGCCAGAAGAAGGCATaGTATACCCCTGGAACTGGA +
Preference number: 3 (lower is better)
Translates to: GLCHMADVTLGVIETRFRGQKKA*YTPGTG
Trigger: TCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCC...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR TCA 72 bp TGTGTTCCTAGGTGTGCAGGGTTTATGCCACATGGCTaGCGTCACACTGGGAGTGATAGAGACAAGATTCAG +
Preference number: 3 (lower is better)
Translates to: CVPRCAGFMPHG*RHTGSDRDKIQ
Trigger: CTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACCCTGCACACCTAGGAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CCA 72 bp TGGAGGCCAGAAGAAGGCATTGTATACCCCTGGAACTaGATTACAGACAGTTGTGAGCTACCTGACATGGTG +
Preference number: 3 (lower is better)
Translates to: WRPEEGIVYPWN*ITDSCELPDMV
Trigger: CACCATGTCAGGTAGCTCACAACTGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CCA 72 bp TGCCATTGGAGGCCAGAAGAAGGCATTGTATACCCCTaGAACTGGATTACAGACAGTTGTGAGCTACCTGAC +
Preference number: 3 (lower is better)
Translates to: CHWRPEEGIVYP*NWITDSCELPD
Trigger: GTCAGGTAGCTCACAACTGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTGGCCAGAAGAAGGCATaGTATACCCCTGGAACTGGA +
Preference number: 3 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSGQKKA*YTPGTG
Trigger: TCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCC...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCACGATACTCAGAGGGTaGAATGATGGATCCCAGGTC +
Preference number: 3 (lower is better)
Translates to: LDTVLIQPRSICPGNGAATILRG*NDGSQV
Trigger: GACCTGGGATCCATCATTCAACCCTCTGAGTATCGT...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR GCA 72 bp ACTGTTTTCTTTGTGTTCCTAGGTGTGCAGGGTTTATaGCACATGGCTGACGTCACACTGGGAGTGATAGAG +
Preference number: 3 (lower is better)
Translates to: TVFFVFLGVQGL*HMADVTLGVIE
Trigger: CTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACCCTGCACACCTAGGAACACAAAGAAAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCTAGGGAGTTTGCACTaGCTGGCCCTTTTCTTCATA +
Preference number: 3 (lower is better)
Translates to: FMREENVMQLPQGTSFSLLGSLH*LALFFI
Trigger: TATGAAGAAAAGGGCCAGCAAGTGCAAACTCCCTAG...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCTTGTGGAGTGGCCTCTaGACACAGTTCATTCCTTCT +
Preference number: 3 (lower is better)
Translates to: LDTVLIQPRSICPGNGAALWSGL*TQFIPS
Trigger: AGAAGGAATGAACTGTGTCAAGAGGCCACTCCACAA...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGACGATACTCAGAGGGTaGAATGATGGATCCCAGGTC +
Preference number: 3 (lower is better)
Translates to: VISDQETHREGHIAETIETILRG*NDGSQV
Trigger: GACCTGGGATCCATCATTCAACCCTCTGAGTATCGT...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR TCA 72 bp GAGCTTGAGAAAGACCCACTTGCTGTACATGCACTGTaGTCTCTGACCAGGAAACTCACAGAGAAGGACATA +
Preference number: 3 (lower is better)
Translates to: ELEKDPLAVHAL*SLTRKLTEKDI
Trigger: TATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCACAGTGCATGTACAGCAAGTGGGTCTTTCTCAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR GCA 72 bp CTGTCTGTGTCTGAGTTTATGCCATGTGTGTACAAATaGCATTGGAGGCCAGAAGAAGGCATTGTATACCCC +
Preference number: 3 (lower is better)
Translates to: LSVSEFMPCVYK*HWRPEEGIVYP
Trigger: GGGGTATACAATGCCTTCTTCTGGCCTCCAATGGCATTTGTACACACATGGCATAAACTCAGACACAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CCA 72 bp GTGTCTGAGTTTATGCCATGTGTGTACAAATGCCATTaGAGGCCAGAAGAAGGCATTGTATACCCCTGGAAC +
Preference number: 3 (lower is better)
Translates to: VSEFMPCVYKCH*RPEEGIVYPWN
Trigger: GTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGCATTTGTACACACATGGCATAAACTCAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGGAGAATGTGATGCAGTaGCCCCAGGGAACTAGCTTC +
Preference number: 3 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMENVMQ*PQGTSF
Trigger: GAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGGAGACAAGATTCAGATaGTGGAGTGGCCTCTTGACA +
Preference number: 3 (lower is better)
Translates to: VISDQETHREGHIAETIEETRFR*WSGLLT
Trigger: TGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTC...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CCA 72 bp ACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTaGCCTCTTGACACAGTTCATTCCTTCTCTATGTCC +
Preference number: 3 (lower is better)
Translates to: TGSDRDKIQIVE*PLDTVHSFSMS
Trigger: GGACATAGAGAAGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGTTGAGAAAGACCCACTaGCTGTACATGCACTGTGAT +
Preference number: 3 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKELRKTH*LYMHCD
Trigger: ATCACAGTGCATGTACAGCAAGTGGGTCTTTCTCAA...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp GTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTCCTTCATATCTGTATTCCTaGCTGTCTGTGTTCATGAGA +
Preference number: 3 (lower is better)
Translates to: VIETRFRLWSGLLTQFIPSYLYS*LSVFMR
Trigger: TCTCATGAACACAGACAGCAAGGAATACAGATATGA...AGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGTGTGTACAAATGCCATaGGAGGCCAGAAGAAGGCAT +
Preference number: 3 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWCVQMP*EARRRH
Trigger: ATGCCTTCTTCTGGCCTCCAATGGCATTTGTACACA...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR-3UTR CAA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGCTAGGGAGTTTGCACTaGCTGGCCCTTTTCTTCATA +
Preference number: 3 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWLGSLH*LALFFI
Trigger: TATGAAGAAAAGGGCCAGCAAGTGCAAACTCCCTAG...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR TCA 72 bp CTCATGGTTCTGAAGCTGTTTTTCTTGCTAACTAGGTaGATTCTGGCACGTTTCAGCTTTCATATCTGTATT +
Preference number: 3 (lower is better)
Translates to: LMVLKLFFLLTR*ILARFSFHICI
Trigger: AATACAGATATGAAAGCTGAAACGTGCCAGAATTCACCTAGTTAGCAAGAAAAACAGCTTCAGAACCATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR TCA 72 bp ACGGAATGGTCATTAGTTAAAGCATGGGGTGTTTATTaGCTCATGGTTCTGAAGCTGTTTTTCTTGCTAACT +
Preference number: 3 (lower is better)
Translates to: TEWSLVKAWGVY*LMVLKLFFLLT
Trigger: AGTTAGCAAGAAAAACAGCTTCAGAACCATGAGTCAATAAACACCCCATGCTTTAACTAATGACCATTCCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR GCA 72 bp CAGCGACAACAAATCAATCTTTTATTGTGCTTTAGTTaGTACACGGAATGGTCATTAGTTAAAGCATGGGGT +
Preference number: 3 (lower is better)
Translates to: QRQQINLLLCFS*YTEWSLVKAWG
Trigger: ACCCCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATTGATTTGTTGTCGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR GCA 72 bp AAAGTCTCTCAGCGACAACAAATCAATCTTTTATTGTaGTTTAGTTGCTACACGGAATGGTCATTAGTTAAA +
Preference number: 3 (lower is better)
Translates to: KVSQRQQINLLL*FSCYTEWSLVK
Trigger: TTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATTGATTTGTTGTCGCTGAGAGACTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTTGCCACAGCAGCCGCTaGGGCCGAGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLACHSSR*GREPLP
Trigger: CGGGAGCGGCTCTCGGCCGCAGCGGCTGCTGTGGCA...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTCCGCCGCCGCCTCGGTaGCCGTGGATGAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLAPPPPR*PWMKRC
Trigger: GCAGCGCTTCATCCACGGGCACCGAGGCGGCGGCGG...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCCGCTGCCACTGGCACTaGCGCTCCCGCTGCGTTCCG +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLRCHWH*RSRCVP
Trigger: CGGAACGCAGCGGGAGCGGCAGTGCCAGTGGCAGCG...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACGTGCCACCGGTGTTGTaGGCTCGCTCTCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDVPPVL*ARSPGP
Trigger: GGGCCCCGGAGAGCGAGCGCACAACACCGGTGGCAC...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCGTGCCACCGGTGTTGTaGGCTCGCTCTCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LDTVLIQPRSICPGNGAAVPPVL*ARSPGP
Trigger: GGGCCCCGGAGAGCGAGCGCACAACACCGGTGGCAC...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTTCTCCAAGCGGAGCCTaGCCTCCACACACCTCCGGG +
Preference number: 4 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLASPSGA*PPHTSG
Trigger: CCCGGAGGTGTGTGGAGGCCAGGCTCCGCTTGGAGA...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCCCAAGATGGCCCAGGTaGGAGGCAGGGGAAGCATGC +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLPRWPR*EAGEAC
Trigger: GCATGCTTCCCCTGCCTCTCACCTGGGCCATCTTGG...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTCCGTGGATGAAGCGCTaGTCCGTGATGTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLAPWMKR*SVMCRT
Trigger: GGTGCGGCACATCACGGAGCAGCGCTTCATCCACGG...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCACCGCCGCCGCCTCGGTaGCCGTGGATGAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PTIGFLIVPPRMYPREFAPPPPR*PWMKRC
Trigger: GCAGCGCTTCATCCACGGGCACCGAGGCGGCGGCGG...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTAGCTGCGGCGCGTGGTaGTTGGGTCCACTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSSCGAW*LGPLPA
Trigger: TGCGGGCAGTGGACCCAATCACCACGCGCCGCAGCT...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGTGCCGCACCGCCGTCTaGCACAGCAGCCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKECRTAV*HSSRCG
Trigger: GCCGCAGCGGCTGCTGTGGCAGACGGCGGTGCGGCA...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCACGCTGCCACTGGCACTaGCGCTCCCGCTGCGTTCCG +
Preference number: 4 (lower is better)
Translates to: PTIGFLIVPPRMYPREFARCHWH*RSRCVP
Trigger: CGGAACGCAGCGGGAGCGGCAGTGCCAGTGGCAGCG...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCCCCATAGCCCAGGCCTaGTGCCAGAATCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLPIAQA*CQNLGG
Trigger: ACCACCCAGATTCTGGCAGCAGGCCTGGGCTATGGG...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACGTCTCCAGGAAGGCCTaGCGCTGGGCACGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDVSRKA*RWARSE
Trigger: TTCAGACCGTGCCCAGCGCCAGGCCTTCCTGGAGAC...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTAGCTGCGGCGCGTGGTaGTTGGGTCCACTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GVIETRFRLWSGLLTQFISCGAW*LGPLPA
Trigger: TGCGGGCAGTGGACCCAATCACCACGCGCCGCAGCT...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGACCAAGATGGCCCAGGTaGGAGGCAGGGGAAGCATGC +
Preference number: 4 (lower is better)
Translates to: GLCHMADVTLGVIETRFRPRWPR*EAGEAC
Trigger: GCATGCTTCCCCTGCCTCTCACCTGGGCCATCTTGG...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTACACCTGCCACCACTaGGCCATGGCTGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLYTCHH*AMADAD
Trigger: ATCGGCATCAGCCATGGCTCAGTGGTGGCAGGTGTA...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGTGCCACAGCAGCCGCTaGGGCCGAGAGCCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMCHSSR*GREPLP
Trigger: CGGGAGCGGCTCTCGGCCGCAGCGGCTGCTGTGGCA...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGACCGTGGATGAAGCGCTaGTCCGTGATGTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: GLCHMADVTLGVIETRFRPWMKR*SVMCRT
Trigger: GGTGCGGCACATCACGGAGCAGCGCTTCATCCACGG...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCACCGCCTCGGTGCCCGTaGATGAAGCGCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PTIGFLIVPPRMYPREFAPPRCP*MKRCSV
Trigger: CACGGAGCAGCGCTTCATCCACGGGCACCGAGGCGG...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCATCCTGACCAGCTCCTaGGCAGACAAGGTCGTAGAG +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLILTSS*ADKVVE
Trigger: CTCTACGACCTTGTCTGCTCAGGAGCTGGTCAGGAT...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACCCGGAAAGACTTTGGTaGCACCGGTGTTGTGCGCTC +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDPERLW*HRCCAL
Trigger: GAGCGCACAACACCGGTGGCACCAAAGTCTTTCCGG...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GCCATTGGAGGCCAGAAGAAGGCATTGTATACCCCTGGAACTGGATTACAGACACTTGCAGCAAAGATGTaGCCAGGCCGGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: AIGGQKKALYTPGTGLQTLAAKM*PGRPRW
Trigger: CCATCTTGGCCGGCCTGGGCACATCTTTGCTGCAAG...TGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCGGCCCAGACTGGACATaGAAAGCTTGTGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLGPDWT*KACARW
Trigger: CCATCTCGCACAAGCTTTGCATGTCCAGTCTGGGCC...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCCTGAGAGTAGAAGTCTaGGAACCCAGGGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLLRVEV*EPRDGG
Trigger: GCCTCCATCCCTGGGTTCGCAGACTTCTACTCTCAG...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACGGCCACTTACTCCCGTaGTGTCCATTCGGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDGHLLP*CPFGLP
Trigger: TGGCAAGCCGAATGGACAGCACGGGAGTAAGTGGCC...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTTCTCCAAGCGGAGCCTaGCCTCCACACACCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GVIETRFRLWSGLLTQFISPSGA*PPHTSG
Trigger: CCCGGAGGTGTGTGGAGGCCAGGCTCCGCTTGGAGA...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCGTCGAAAGGCAGCTCTaGGCTCCACGATCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLVERQL*APRSFC
Trigger: ACAGAAGGATCGTGGAGCCCAGAGCTGCCTTTCGAC...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACGGCGGGCCACATGGCTaGGTAAGATATTGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDGGPHG*VRYCAA
Trigger: TGCTGCGCAATATCTTACCCAGCCATGTGGCCCGCC...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTATTTCAACACAGCAATaGGCGTGGTCCCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSISTQQ*AWSRRG
Trigger: GCCCCGCCGGGACCACGCTCATTGCTGTGTTGAAAT...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCTACACCTGCCACCACTaGGCCATGGCTGATGCCGAT +
Preference number: 4 (lower is better)
Translates to: FMREENVMQLPQGTSFSLYTCHH*AMADAD
Trigger: ATCGGCATCAGCCATGGCTCAGTGGTGGCAGGTGTA...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTTCCTTGGGGGTAAGATaGATGGGTTGGGTTGGACTC +
Preference number: 4 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLASLGVR*MGWVGL
Trigger: GAGTCCAACCCAACCCATTCATCTTACCCCCAAGGA...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTGAGGCCAGGCTCAAGTaGAGGACTAAAAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLAEARLK*RTKRVS
Trigger: ACTCACCCTTTTAGTCCTGCACTTGAGCCTGGCCTC...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCTTGCAGCAAAGATGTaGCCAGGCCGGCCAAGATGG +
Preference number: 4 (lower is better)
Translates to: FMREENVMQLPQGTSFSLLAAKM*PGRPRW
Trigger: CCATCTTGGCCGGCCTGGGCACATCTTTGCTGCAAG...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GCCATTGGAGGCCAGAAGAAGGCATTGTATACCCCTGGAACTGGATTACAGACAGGCCCAGACTGGACATaGAAAGCTTGTGCGAGATGG +
Preference number: 4 (lower is better)
Translates to: AIGGQKKALYTPGTGLQTGPDWT*KACARW
Trigger: CCATCTCGCACAAGCTTTGCATGTCCAGTCTGGGCC...TGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGAGGCCACTTACTCCCGTaGTGTCCATTCGGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GLCHMADVTLGVIETRFRGHLLP*CPFGLP
Trigger: TGGCAAGCCGAATGGACAGCACGGGAGTAAGTGGCC...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGCCGCCTCGGTGCCCGTaGATGAAGCGCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMPPRCP*MKRCSV
Trigger: CACGGAGCAGCGCTTCATCCACGGGCACCGAGGCGG...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCCTTGAGAGGGTCCATTaGAGCCGAGGCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: LDTVLIQPRSICPGNGAALERVH*SRGQAQ
Trigger: TTGAGCCTGGCCTCGGCTCCAATGGACCCTCTCAAG...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCTTGAGAGGGTCCATTaGAGCCGAGGCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FMREENVMQLPQGTSFSLLERVH*SRGQAQ
Trigger: TTGAGCCTGGCCTCGGCTCCAATGGACCCTCTCAAG...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCTCTTTCTCCAGGAAGTaGCGGGCCACATGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LDTVLIQPRSICPGNGAASFSRK*RATWLG
Trigger: ACCCAGCCATGTGGCCCGCCACTTCCTGGAGAAAGA...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGCTAGCAGGATGCCCTTaGGAGGGTCCATTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIELAGCP*EGPLEP
Trigger: CGGCTCCAATGGACCCTCTCAAGGGCATCCTGCTAG...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCATCCTGACCAGCTCCTaGGCAGACAAGGTCGTAGAG +
Preference number: 4 (lower is better)
Translates to: FMREENVMQLPQGTSFSLILTSS*ADKVVE
Trigger: CTCTACGACCTTGTCTGCTCAGGAGCTGGTCAGGAT...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGATTTCAACACAGCAATaGGCGTGGTCCCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIEISTQQ*AWSRRG
Trigger: GCCCCGCCGGGACCACGCTCATTGCTGTGTTGAAAT...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGTGCCGCACCGCCGTCTaGCACAGCAGCCGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWCRTAV*HSSRCG
Trigger: GCCGCAGCGGCTGCTGTGGCAGACGGCGGTGCGGCA...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTGAGGCAGGGGAAGCATaGTGTAGGTGGCGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSEAGEA*CRWRRV
Trigger: CACTCTTCGCCACCTACAGCATGCTTCCCCTGCCTC...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTAGCGATGGATGTAGATaGGGTGGAACTGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLASDGCR*GGTDAA
Trigger: TGCAGCATCAGTTCCACCGCATCTACATCCATCGCT...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCGACCAGACATCAAACTaGCATTTCCTCAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLDQTSN*HFLRPN
Trigger: GTTGGGCCTGAGGAAATGGCAGTTTGATGTCTGGTC...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTCCTGGGGCGTCGGTTGGATaGTGTAGAGTTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: VIETRFRLWSGLLTQFIPGASVG*CRVPRC
Trigger: GCAGCGAGGAACTCTACACCATCCAACCGACGCCCC...AGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCCCAGGACGACAAACCTaGGGAGCACAGACAGCACAA +
Preference number: 4 (lower is better)
Translates to: LDTVLIQPRSICPGNGAAPGRQT*GAQTAQ
Trigger: TTGTGCTGTCTGTGCTCCCCAGGTTTGTCGTCCTGG...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCGTCTCCTCAGGAACTTaGATCCGGCCACTTACTCCC +
Preference number: 4 (lower is better)
Translates to: LDTVLIQPRSICPGNGAAVSSGT*IRPLTP
Trigger: GGGAGTAAGTGGCCGGATCCAAGTTCCTGAGGAGAC...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCCTGTATTCATACACATaGATAGCACCACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLLYSYT*IAPPGP
Trigger: TGGCCCAGGTGGTGCTATTCATGTGTATGAATACAG...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCGCGCTGGGCACGGTCTaGAAGGTAACTGATGAAGAT +
Preference number: 4 (lower is better)
Translates to: FMREENVMQLPQGTSFSLALGTV*KVTDED
Trigger: ATCTTCATCAGTTACCTTTCAGACCGTGCCCAGCGC...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATCCTTGGGGGTAAGATaGATGGGTTGGGTTGGACTC +
Preference number: 4 (lower is better)
Translates to: GLCHMADVTLGVIETRFRSLGVR*MGWVGL
Trigger: GAGTCCAACCCAACCCATTCATCTTACCCCCAAGGA...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CCAGAAGTTACTAAGCACCCAATAACATCAAGGTTCTATTTACACATGCTCTTTCGCTGCTCCGTGATGTaGCGCACCGCCGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PEVTKHPITSRFYLHMLFRCSVM*RTAVCH
Trigger: GTGGCAGACGGCGGTGCGGCACATCACGGAGCAGCG...AAAGAGCATGTGTAAATAGAACCTTGATGTTATTGGGTGCTTAGTAACTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTGAGGCAGGGGAAGCATaGTGTAGGTGGCGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: GVIETRFRLWSGLLTQFIEAGEA*CRWRRV
Trigger: CACTCTTCGCCACCTACAGCATGCTTCCCCTGCCTC...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTGGCTGGGTAAGATATTaGGCAGCATGTTCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLAGWVRY*AACSRC
Trigger: ACAACGAGAACATGCTGCGCAATATCTTACCCAGCC...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTGTCGAAAGGCAGCTCTaGGCTCCACGATCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSVERQL*APRSFC
Trigger: ACAGAAGGATCGTGGAGCCCAGAGCTGCCTTTCGAC...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACATGAATGGGTTGGGTTaGACTCGTCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDMNGLG*TRPRRK
Trigger: CTTTCTCCTGGGACGAGTCCAACCCAACCCATTCAT...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGCTAGCAGGATGCCCTTaGGAGGGTCCATTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMLAGCP*EGPLEP
Trigger: CGGCTCCAATGGACCCTCTCAAGGGCATCCTGCTAG...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTGCGCTGGGCACGGTCTaGAAGGTAACTGATGAAGAT +
Preference number: 4 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSALGTV*KVTDED
Trigger: ATCTTCATCAGTTACCTTTCAGACCGTGCCCAGCGC...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GCCATTGGAGGCCAGAAGAAGGCATTGTATACCCCTGGAACTGGATTACAGACAGTGGCTTTAGAAATGTaGATCCTCCCAGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: AIGGQKKALYTPGTGLQTVALEM*ILPGIP
Trigger: AGGAATCCCTGGGAGGATTCACATTTCTAAAGCCAC...TGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGACGTTATAGTCACCATTaGGGCAATCCAGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GLCHMADVTLGVIETRFRRYSHH*GNPGWL
Trigger: AAGCCACCCTGGATTGCCTCAATGGTGACTATAACG...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGGGGCAGAGTGCAGCATaGTCAGGATGGAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIEGQSAA*SGWRTG
Trigger: TCCAGTTCTCCATCCTGATCATGCTGCACTCTGCCC...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTGGGCAGAGTGCAGCATaGTCAGGATGGAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: GVIETRFRLWSGLLTQFIGQSAA*SGWRTG
Trigger: TCCAGTTCTCCATCCTGATCATGCTGCACTCTGCCC...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGCCGGAAAGACTTTGGTaGCACCGGTGTTGTGCGCTC +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEPERLW*HRCCAL
Trigger: GAGCGCACAACACCGGTGGCACCAAAGTCTTTCCGG...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTGAGGCCAGGCTCAAGTaGAGGACTAAAAGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSEARLK*RTKRVS
Trigger: ACTCACCCTTTTAGTCCTGCACTTGAGCCTGGCCTC...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGCCCATAGCCCAGGCCTaGTGCCAGAATCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMPIAQA*CQNLGG
Trigger: ACCACCCAGATTCTGGCAGCAGGCCTGGGCTATGGG...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTAAAGCACGTAGCCTATaGCGTCGCCCAGAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GVIETRFRLWSGLLTQFIKARSL*RRPEAH
Trigger: ATGGGCTTCTGGGCGACGGCATAGGCTACGTGCTTT...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTCCTTCTGTGAATGTTaGTCCACTGTTTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLSFCEC*STVSPV
Trigger: GACAGGAGAAACAGTGGAGCAACATTCACAGAAGGA...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGCTGAGAGTAGAAGTCTaGGAACCCAGGGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIELRVEV*EPRDGG
Trigger: GCCTCCATCCCTGGGTTCGCAGACTTCTACTCTCAG...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGGCGGCGCGTGGTGATTaGGTCCACTGCCCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWAARGD*VHCPQG
Trigger: ACCCTGCGGGCAGTGGACCCAATCACCACGCGCCGC...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGCCTGCTGCCAGAATCTaGGTGGTCATAGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIEPAARI*VVIATQ
Trigger: TTGGGTGGCTATGACCACCCAGATTCTGGCAGCAGG...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGTCCTCAGGCCCAGACTaGACATGCAAAGCTTGTGCG +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIESSGPD*TCKACA
Trigger: CGCACAAGCTTTGCATGTCCAGTCTGGGCCTGAGGA...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCCACTCCGCAAGTCGATaGTATGCTCTATTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLHSASR*YALFSC
Trigger: ACAAGAGAATAGAGCATACCATCGACTTGCGGAGTG...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCAGTCTCCTCAGGAACTTaGATCCGGCCACTTACTCCC +
Preference number: 4 (lower is better)
Translates to: PTIGFLIVPPRMYPREFAVSSGT*IRPLTP
Trigger: GGGAGTAAGTGGCCGGATCCAAGTTCCTGAGGAGAC...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 72 bp CTGTCTGTGTTCATGAGAGAAGAGAATGTGATGCAGTaGCCCCAGGGAACTAGCTTCTCACTCCAACCATTG +
Preference number: 4 (lower is better)
Translates to: LSVFMREENVMQ*PQGTSFSLQPL
Trigger: CAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAACACAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTAATTGCTGTTCTCGTTaGGAAGTTGCTTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLANCCSR*EVASAF
Trigger: AAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATT...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCATCACTACCTCCGATTTaGGCCTCTGGCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: PTIGFLIVPPRMYPREFASLPPI*ASGPGN
Trigger: ATTTCCTGGGCCAGAGGCGCAAATCGGAGGTAGTGA...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGAAAGCACGTAGCCTATaGCGTCGCCCAGAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEKARSL*RRPEAH
Trigger: ATGGGCTTCTGGGCGACGGCATAGGCTACGTGCTTT...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACTCCTTCTGTGAATGTTaGTCCACTGTTTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDSFCEC*STVSPV
Trigger: GACAGGAGAAACAGTGGAGCAACATTCACAGAAGGA...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACACTTATAGTCTTCTaGTGTGGTGATGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDTLIVF*CGDEDQ
Trigger: CTGGTCCTCATCACCACAGCAGAAGACTATAAGTGT...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCAGTTGCTTCTGCCTTTaGCTGTTGAGAGACTGGACA +
Preference number: 4 (lower is better)
Translates to: FMREENVMQLPQGTSFSLSCFCL*LLRDWT
Trigger: TGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACT...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCAGTTGCTTCTGCCTTTaGCTGTTGAGAGACTGGACA +
Preference number: 4 (lower is better)
Translates to: LDTVLIQPRSICPGNGAASCFCL*LLRDWT
Trigger: TGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACT...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGAAATCGGATTTGTCAGTaGCTTCAGCTTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLCHMADVTLGVIETRFRNRICQ*LQLVLQ
Trigger: CTGGAGCACAAGCTGAAGGCACTGACAAATCCGATT...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGGGGGCGTCGGTTGGATaGTGTAGAGTTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLGASVG*CRVPRC
Trigger: GCAGCGAGGAACTCTACACCATCCAACCGACGCCCC...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGTCCTCAGGCCCAGACTaGACATGCAAAGCTTGTGCG +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKESSGPD*TCKACA
Trigger: CGCACAAGCTTTGCATGTCCAGTCTGGGCCTGAGGA...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GCCATTGGAGGCCAGAAGAAGGCATTGTATACCCCTGGAACTGGATTACAGACACACTCCGCAAGTCGATaGTATGCTCTATTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: AIGGQKKALYTPGTGLQTHSASR*YALFSC
Trigger: ACAAGAGAATAGAGCATACCATCGACTTGCGGAGTG...TGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGACATTGGTCATGTCGTTaGTCATTTCCAGGACGACAA +
Preference number: 4 (lower is better)
Translates to: GLCHMADVTLGVIETRFRHWSCR*SFPGRQ
Trigger: TTGTCGTCCTGGAAATGATCAACGACATGACCAATG...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACTCAGTGAGAATGGCTTaGTATGCTCTCTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDSVRMA*YALFST
Trigger: AGTTGAGAAGAGAGCATATCAAGCCATTCTCACTGA...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACTGCACAGACCAAGTTTaGCTTGAATACTTCATCCCT +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDCTDQV*LEYFIP
Trigger: AGGGATGAAGTATTCAAGTCAAACTTGGTCTGTGCA...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCATAGGCATCAGCCTTaGAGAAGGAAGCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: FMREENVMQLPQGTSFSLHRHQP*RRKQTL
Trigger: CAAAGTTTGCTTCCTTCTTCAAGGCTGATGCCTATG...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGCTCTGGGGACAGTCCTaGGACAGCCATGTATGTACT +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKELWGQS*DSHVCT
Trigger: AGTACATACATGGCTGTCTCAGGACTGTCCCCAGAG...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCAGACCAGACATCAAACTaGCATTTCCTCAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PTIGFLIVPPRMYPREFADQTSN*HFLRPN
Trigger: GTTGGGCCTGAGGAAATGGCAGTTTGATGTCTGGTC...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCTTCTCGTTGAGAAGTTaGTTCTGCCTTTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LDTVLIQPRSICPGNGAAFSLRS*FCLCLL
Trigger: CAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAA...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGCCAGGACGACAAACCTaGGGAGCACAGACAGCACAA +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMPGRQT*GAQTAQ
Trigger: TTGTGCTGTCTGTGCTCCCCAGGTTTGTCGTCCTGG...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGGCAGTGATGCTTCCTTaGTCCCCAGGAAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIEAVMLP*SPGNLL
Trigger: GAGAAGATTTCCTGGGGACCAAGGAAGCATCACTGC...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTCCTATGAATGGGTTGGGTTaGACTCGTCCCAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VIETRFRLWSGLLTQFIPMNGLG*TRPRRK
Trigger: CTTTCTCCTGGGACGAGTCCAACCCAACCCATTCAT...AGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 72 bp GTGTGTACAAATGCCATTGGAGGCCAGAAGAAGGCATaGTATACCCCTGGAACTGGATTACAGACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: VCTNAIGGQKKA*YTPGTGLQTVV
Trigger: CACAACTGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGCATTTGTACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 72 bp ATGGATCCCAGGTCAGATGTATACTTGGTGGGATTCTaGGAACTTAGCCCCTTGCTACTGTGTTTGATGGGA +
Preference number: 4 (lower is better)
Translates to: MDPRSDVYLVGF*ELSPLLLCLMG
Trigger: TCCCATCAAACACAGTAGCAAGGGGCTAAGTTCCAAGAATCCCACCAAGTATACATCTGACCTGGGATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTAGCTGTATCCTCCATTaGGGAAGAAATCCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSSCILH*GRNPSY
Trigger: GTAACTCGGATTTCTTCCTCAATGGAGGATACAGCT...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTCTGTATTCATACACATaGATAGCACCACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GVIETRFRLWSGLLTQFILYSYT*IAPPGP
Trigger: TGGCCCAGGTGGTGCTATTCATGTGTATGAATACAG...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGTGGCCAACACCCCAGTaGAGACAAAGTACTCTGGGT +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMWPTPQ*RQSTLG
Trigger: ACCCAGAGTACTTTGTCTTCACTGGGGTGTTGGCCA...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023007.7
CDS-3UTR TCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGGTTCCTTCATCTCGTTaGTCTCCTCTTTGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIEVPSSR*SPLWPV
Trigger: TACAGGCCAAAGAGGAGATCAACGAGATGAAGGAAC...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGCTCTGGGGACAGTCCTaGGACAGCCATGTATGTACT +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMLWGQS*DSHVCT
Trigger: AGTACATACATGGCTGTCTCAGGACTGTCCCCAGAG...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATCCCTTCTTGTTCACTaGTGCCCTTCACATATATCT +
Preference number: 4 (lower is better)
Translates to: GLCHMADVTLGVIETRFRSLLVH*CPSHIS
Trigger: AGATATATGTGAAGGGCATCAGTGAACAAGAAGGGA...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGTCTGCCTTTGCCTGTTaGGAGACTGGACAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMSAFAC*ETGQGQ
Trigger: TTGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGA...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACTGGCCAACACCCCAGTaGAGACAAAGTAAATATTTA +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDWPTPQ*RQSKYL
Trigger: TAAATATTTACTTTGTCTTCACTGGGGTGTTGGCCA...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGAGCGATGGATGTAGATaGGGTGGAACTGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKESDGCR*GGTDAA
Trigger: TGCAGCATCAGTTCCACCGCATCTACATCCATCGCT...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCAAATCGGATTTGTCAGTaGCTTCAGCTTGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PTIGFLIVPPRMYPREFANRICQ*LQLVLQ
Trigger: CTGGAGCACAAGCTGAAGGCACTGACAAATCCGATT...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGCCTGCTGCCAGAATCTaGGTGGTCATAGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLPAARI*VVIATQ
Trigger: TTGGGTGGCTATGACCACCCAGATTCTGGCAGCAGG...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGCAGCAAGAAGGAACATaGCCATCAGCAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEQQEGT*PSAAVM
Trigger: CATCACTGCTGCTGATGGCCATGTTCCTTCTTGCTG...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp CCAGAAGTTACTAAGCACCCAATAACATCAAGGTTCTATTTACACATGCTCTTTTCTTTCTCCAGGAAGTaGCGGGCCACATGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PEVTKHPITSRFYLHMLFSFSRK*RATWLG
Trigger: ACCCAGCCATGTGGCCCGCCACTTCCTGGAGAAAGA...AAAGAGCATGTGTAAATAGAACCTTGATGTTATTGGGTGCTTAGTAACTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 72 bp TTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCACTaGCTGGCCCTTTTCTTCATATCACTTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LFLQECTLGSLH*LALFFISLFSL
Trigger: CAGGGAGAAAAGTGATATGAAGAAAAGGGCCAGCAAGTGCAAACTCCCTAGGGTACATTCTTGGAGGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGGTGGCTTTAGAAATGTaGATCCTCCCAGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEVALEM*ILPGIP
Trigger: AGGAATCCCTGGGAGGATTCACATTTCTAAAGCCAC...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGACTTCATCCCTCATTTaGGAATACTTGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIETSSLI*EYLCSR
Trigger: CCTGGAGCACAAGTATTCTCAAATGAGGGATGAAGT...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTACTTCATCCCTCATTTaGGAATACTTGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GVIETRFRLWSGLLTQFITSSLI*EYLCSR
Trigger: CCTGGAGCACAAGTATTCTCAAATGAGGGATGAAGT...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGGTTCCTTCATCTCGTTaGTCTCCTCTTTGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEVPSSR*SPLWPV
Trigger: TACAGGCCAAAGAGGAGATCAACGAGATGAAGGAAC...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGTCTGCCTTTGCCTGTTaGGAGACTGGACAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLSAFAC*ETGQGQ
Trigger: TTGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGA...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGTCACTACCTCCGATTTaGGCCTCTGGCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLSLPPI*ASGPGN
Trigger: ATTTCCTGGGCCAGAGGCGCAAATCGGAGGTAGTGA...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GCCATTGGAGGCCAGAAGAAGGCATTGTATACCCCTGGAACTGGATTACAGACACGCAAGTCGATGGTATaGTCTATTCTCTTGTTAATT +
Preference number: 4 (lower is better)
Translates to: AIGGQKKALYTPGTGLQTRKSMV*SILLLI
Trigger: AATTAACAAGAGAATAGAGCATACCATCGACTTGCG...TGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCAACACTTATAGTCTTCTaGTGTGGTGATGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PTIGFLIVPPRMYPREFATLIVF*CGDEDQ
Trigger: CTGGTCCTCATCACCACAGCAGAAGACTATAAGTGT...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGACATTTATCTTCACATTaGTGTTTCTCTGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: GLCHMADVTLGVIETRFRHLSSH*CFSGDS
Trigger: ACTGTCCCCAGAGAAACAGCAATGTGAAGATAAATG...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCATTTATCTTCACATTaGTGTTTCTCTGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: FMREENVMQLPQGTSFSLHLSSH*CFSGDS
Trigger: ACTGTCCCCAGAGAAACAGCAATGTGAAGATAAATG...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGTTCTCGTTGAGAAGTTaGTTCTGCCTTTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIEFSLRS*FCLCLL
Trigger: CAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAA...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GCCATTGGAGGCCAGAAGAAGGCATTGTATACCCCTGGAACTGGATTACAGACAAAAGCTTGTGCGAGATaGTTTGGAAGCAGATTTATT +
Preference number: 4 (lower is better)
Translates to: AIGGQKKALYTPGTGLQTKACAR*FGSRFI
Trigger: AATAAATCTGCTTCCAAACCATCTCGCACAAGCTTT...TGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACCCAAATGTCATACTGTaGTTTCTTAGCTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDPNVIL*FLSSNY
Trigger: GTAATTGGAGCTAAGAAACCACAGTATGACATTTGG...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 72 bp GTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTaGACACAGTTCATTCCTTCTCTATGTCCCCTTACA +
Preference number: 4 (lower is better)
Translates to: VIETRFRLWSGL*TQFIPSLCPLT
Trigger: TGTAAGGGGACATAGAGAAGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTCCTTCAGTGAGAATGGCTTaGTATGCTCTCTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: VIETRFRLWSGLLTQFIPSVRMA*YALFST
Trigger: AGTTGAGAAGAGAGCATATCAAGCCATTCTCACTGA...AGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTTGCACAGACCAAGTTTaGCTTGAATACTTCATCCCT +
Preference number: 4 (lower is better)
Translates to: GVIETRFRLWSGLLTQFICTDQV*LEYFIP
Trigger: AGGGATGAAGTATTCAAGTCAAACTTGGTCTGTGCA...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCGAAGGAAGCAAACTTTaGATTGCAGTGATAAACAGA +
Preference number: 4 (lower is better)
Translates to: FMREENVMQLPQGTSFSLEGSKL*IAVINR
Trigger: TCTGTTTATCACTGCAATTCAAAGTTTGCTTCCTTC...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGCATCAAAGTCAGCAATaGTCTCATTCAGCAAGCGCA +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEHQSQQ*SHSASA
Trigger: TGCGCTTGCTGAATGAGATCATTGCTGACTTTGATG...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTTCCCTTCTTGTTCACTaGTGCCCTTCACATATATCT +
Preference number: 4 (lower is better)
Translates to: GVIETRFRLWSGLLTQFISLLVH*CPSHIS
Trigger: AGATATATGTGAAGGGCATCAGTGAACAAGAAGGGA...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGAATTGCTGTTCTCGTTaGGAAGTTGCTTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIENCCSR*EVASAF
Trigger: AAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATT...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGGCTGTCCATTCGGCTTaGCAAGTTCACAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLAVHSA*QVHSFP
Trigger: GGGAAAACTGTGAACTTGGCAAGCCGAATGGACAGC...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGTTGAGAAGTTGCTTCTaGCTTTGCCTGTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKELRSCF*LCLLRD
Trigger: GTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAA...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGGAAGACAAAGTACTCTaGGTAGGAGCAGATATCTGT +
Preference number: 4 (lower is better)
Translates to: VISDQETHREGHIAETIEEDKVL*VGADIC
Trigger: ACAGATATCTGCTCCTACCCAGAGTACTTTGTCTTC...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023007.7
CDS-3UTR CCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGGCAGTGATGCTTCCTTaGTCCCCAGGAAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLAVMLP*SPGNLL
Trigger: GAGAAGATTTCCTGGGGACCAAGGAAGCATCACTGC...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CCAGAAGTTACTAAGCACCCAATAACATCAAGGTTCTATTTACACATGCTCTTTGTAGGGTTGGAAAAATaGCCCCTCGGTAGCTGTATC +
Preference number: 4 (lower is better)
Translates to: PEVTKHPITSRFYLHMLFVGLEK*PLGSCI
Trigger: GATACAGCTACCGAGGGGTCATTTTTCCAACCCTAC...AAAGAGCATGTGTAAATAGAACCTTGATGTTATTGGGTGCTTAGTAACTTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTCCTGTCTTTAAACATCAGTaGGAATGGCTTGATATGCTC +
Preference number: 4 (lower is better)
Translates to: VIETRFRLWSGLLTQFIPVFKHQ*EWLDML
Trigger: GAGCATATCAAGCCATTCTCACTGATGTTTAAAGAC...AGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCAATCTGTAAACACAGCTaGGGAATTGAAAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PTIGFLIVPPRMYPREFAICKHS*GIESQV
Trigger: AACCTGACTTTCAATTCCTCAGCTGTGTTTACAGAT...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023007.7
CDS-3UTR GCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTCGCAAGTCGATGGTATaGTCTATTCTCTTGTTAATT +
Preference number: 4 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSRKSMV*SILLLI
Trigger: AATTAACAAGAGAATAGAGCATACCATCGACTTGCG...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR GCA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGTTGAGAAGTTGCTTCTaGCTTTGCCTGTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMLRSCF*LCLLRD
Trigger: GTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAA...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp CCAGAAGTTACTAAGCACCCAATAACATCAAGGTTCTATTTACACATGCTCTTTCAGCAAGAAGGAACATaGCCATCAGCAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: PEVTKHPITSRFYLHMLFQQEGT*PSAAVM
Trigger: CATCACTGCTGCTGATGGCCATGTTCCTTCTTGCTG...AAAGAGCATGTGTAAATAGAACCTTGATGTTATTGGGTGCTTAGTAACTTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTCCAAATGTCATACTGTaGTTTCTTAGCTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSPNVIL*FLSSNY
Trigger: GTAATTGGAGCTAAGAAACCACAGTATGACATTTGG...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGGTCTTTAAACATCAGTaGGAATGGCTTGATATGCTC +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEVFKHQ*EWLDML
Trigger: GAGCATATCAAGCCATTCTCACTGATGTTTAAAGAC...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CCAGAAGTTACTAAGCACCCAATAACATCAAGGTTCTATTTACACATGCTCTTTAGCTGTATCCTCCATTaGGGAAGAAATCCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: PEVTKHPITSRFYLHMLFSCILH*GRNPSY
Trigger: GTAACTCGGATTTCTTCCTCAATGGAGGATACAGCT...AAAGAGCATGTGTAAATAGAACCTTGATGTTATTGGGTGCTTAGTAACTTCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGAGACCAAGTTTGACTTaGATACTTCATCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKERPSLT*ILHPSF
Trigger: AAATGAGGGATGAAGTATTCAAGTCAAACTTGGTCT...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGGGAGAAAGTATGTTTTaGTTTTCCCTTCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEGESMF*FSLLVH
Trigger: GTGAACAAGAAGGGAAAATCAAAACATACTTTCTCC...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 72 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTaGCTGTCTGTGTTCATGAGAGAAGAGAATGTGATG +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYS*LSVFMREENVM
Trigger: CATCACATTCTCTTCTCTCATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGCATTGGTCATGTCGTTaGTCATTTCCAGGACGACAA +
Preference number: 4 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWHWSCR*SFPGRQ
Trigger: TTGTCGTCCTGGAAATGATCAACGACATGACCAATG...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGCATAGGCATCAGCCTTaGAGAAGGAAGCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWHRHQP*RRKQTL
Trigger: CAAAGTTTGCTTCCTTCTTCAAGGCTGATGCCTATG...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CCA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGAAAGCTTGTGCGAGATaGTTTGGAAGCAGATTTATT +
Preference number: 4 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMKACAR*FGSRFI
Trigger: AATAAATCTGCTTCCAAACCATCTCGCACAAGCTTT...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 72 bp CATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTaGTGTTTAGATACTGTTCTTATACAGCCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: HRGHLLCDSIIG*CLDTVLIQPRS
Trigger: GCTTCTAGGCTGTATAAGAACAGTATCTAAACACAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 72 bp CAGAGAAGGACATATAGCAGAAACCATAGAGGACATTaGCTCTGTGACTCAATCATAGGTTTGTGTTTAGAT +
Preference number: 4 (lower is better)
Translates to: QRRTYSRNHRGH*LCDSIIGLCLD
Trigger: ATCTAAACACAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGTCCTTCTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGAGACCAAGTTTGACTTaGATACTTCATCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLRPSLT*ILHPSF
Trigger: AAATGAGGGATGAAGTATTCAAGTCAAACTTGGTCT...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp CCAGAAGTTACTAAGCACCCAATAACATCAAGGTTCTATTTACACATGCTCTTTGGAGAAAGTATGTTTTaGTTTTCCCTTCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PEVTKHPITSRFYLHMLFGESMF*FSLLVH
Trigger: GTGAACAAGAAGGGAAAATCAAAACATACTTTCTCC...AAAGAGCATGTGTAAATAGAACCTTGATGTTATTGGGTGCTTAGTAACTTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR TCA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGGAAGGAAGCAAACTTTaGATTGCAGTGATAAACAGA +
Preference number: 4 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWEGSKL*IAVINR
Trigger: TCTGTTTATCACTGCAATTCAAAGTTTGCTTCCTTC...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
3UTR CAA 72 bp GATAAAGTCTCTCAGCGACAACAAATCAATCTTTTATaGTGCTTTAGTTGCTACACGGAATGGTCATTAGTT +
Preference number: 4 (lower is better)
Translates to: DKVSQRQQINLL*CFSCYTEWSLV
Trigger: AACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATTGATTTGTTGTCGCTGAGAGACTTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp CGCTGCTCCGTGATGTGCCGCACCGCCGTCTGCCACAGCAGCCGCTaGGGCCGAGAGCCGCTCCCGTCGTCGCCGGCCGGGGGCGTCGGT +
Preference number: 5 (lower is better)
Translates to: RCSVMCRTAVCHSSR*GREPLPSSPAGGVG
Trigger: ACCGACGCCCCCGGCCGGCGACGACGGGAGCGGCTCTCGGCCGCAGCGGCTGCTGTGGCAGACGGCGGTGCGGCACATCACGGAGCAGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp GAGACCCCGCCGCCGCCGCCGCCTCGGTGCCCGTGGATGAAGCGCTaGTCCGTGATGTGCCGCACCGCCGTCTGCCACAGCAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: ETPPPPPPRCPWMKR*SVMCRTAVCHSSRC
Trigger: GCAGCGGCTGCTGTGGCAGACGGCGGTGCGGCACATCACGGAGCAGCGCTTCATCCACGGGCACCGAGGCGGCGGCGGCGGCGGGGTCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp GGGTTCGAGGCTTTGCGGGAGACCCCGCCGCCGCCGCCGCCTCGGTaGCCGTGGATGAAGCGCTGCTCCGTGATGTGCCGCACCGCCGTC +
Preference number: 5 (lower is better)
Translates to: GFEALRETPPPPPPR*PWMKRCSVMCRTAV
Trigger: GACGGCGGTGCGGCACATCACGGAGCAGCGCTTCATCCACGGGCACCGAGGCGGCGGCGGCGGCGGGGTCTCCCGCAAAGCCTCGAACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 90 bp GAGGCTTTGCGGGAGACCCCGCCGCCGCCGCCGCCTCGGTGCCCGTaGATGAAGCGCTGCTCCGTGATGTGCCGCACCGCCGTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: EALRETPPPPPPRCP*MKRCSVMCRTAVCH
Trigger: GTGGCAGACGGCGGTGCGGCACATCACGGAGCAGCGCTTCATCCACGGGCACCGAGGCGGCGGCGGCGGCGGGGTCTCCCGCAAAGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp TGCCCGTGGATGAAGCGCTGCTCCGTGATGTGCCGCACCGCCGTCTaGCACAGCAGCCGCTGCGGCCGAGAGCCGCTCCCGTCGTCGCCG +
Preference number: 5 (lower is better)
Translates to: CPWMKRCSVMCRTAV*HSSRCGREPLPSSP
Trigger: CGGCGACGACGGGAGCGGCTCTCGGCCGCAGCGGCTGCTGTGGCAGACGGCGGTGCGGCACATCACGGAGCAGCGCTTCATCCACGGGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 90 bp CGCTGCCACTGGCACTGCCGCTCCCGCTGCGTTCCGGAAAGACTTTaGTGCCACCGGTGTTGTGCGCTCGCTCTCCGGGGCCCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: RCHWHCRSRCVPERL*CHRCCALALRGPEN
Trigger: ATTCTCTGGGCCCCGGAGAGCGAGCGCACAACACCGGTGGCACCAAAGTCTTTCCGGAACGCAGCGGGAGCGGCAGTGCCAGTGGCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp TGCCACTGGCACTGCCGCTCCCGCTGCGTTCCGGAAAGACTTTGGTaGCACCGGTGTTGTGCGCTCGCTCTCCGGGGCCCAGAGAATAGA +
Preference number: 5 (lower is better)
Translates to: CHWHCRSRCVPERLW*HRCCALALRGPENR
Trigger: TCTATTCTCTGGGCCCCGGAGAGCGAGCGCACAACACCGGTGGCACCAAAGTCTTTCCGGAACGCAGCGGGAGCGGCAGTGCCAGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp AAGCACGTAGCCTATGCCGTCGCCCAGAAGCCCATAGCCCAGGCCTaGTGCCAGAATCTGGGTGGTCATAGCCACCCAAGTGACCACGCC +
Preference number: 5 (lower is better)
Translates to: KHVAYAVAQKPIAQA*CQNLGGHSHPSDHA
Trigger: GGCGTGGTCACTTGGGTGGCTATGACCACCCAGATTCTGGCAGCAGGCCTGGGCTATGGGCTTCTGGGCGACGGCATAGGCTACGTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACTTGGTGCCACCGGTGTaGTGCGCTCGCTCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDLVPPV*CARSPG
Trigger: CCCCGGAGAGCGAGCGCACAACACCGGTGGCACCAA...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 90 bp TGCGCAGCATGTTCTCGTTGTGTTCCCTCAGTTCCTTCATCTCGTTaGTCTCCTCTTTGGCCTGTACGCGCCACAGGAAATCCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: CAACSRCVPSVPSSR*SPLWPVRATGNPGG
Trigger: CCCGCCTGGATTTCCTGTGGCGCGTACAGGCCAAAGAGGAGATCAACGAGATGAAGGAACTGAGGGAACACAACGAGAACATGCTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp TTGAGAGACTGGACAAGGCCAAGGACAACCGCAGCCAGAGAGTATTaGCCGGGAAGTCTCCTTGGGGGTAAGATGAATGGGTTGGGTTGG +
Preference number: 5 (lower is better)
Translates to: LRDWTRPRTTAAREY*PGSLLGGKMNGLGW
Trigger: CCAACCCAACCCATTCATCTTACCCCCAAGGAGACTTCCCGGGCAATACTCTCTGGCTGCGGTTGTCCTTGGCCTTGTCCAGTCTCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 90 bp CCACGATGTTGTCGAAAGGCAGCTCTGGGCTCCACGATCCTTCTGTaGATGTTGCTCCACTGTTTCTCCTGTCAGAGCAGCTCACCGACT +
Preference number: 5 (lower is better)
Translates to: PRCCRKAALGSTILL*MLLHCFSCQSSSPT
Trigger: AGTCGGTGAGCTGCTCTGACAGGAGAAACAGTGGAGCAACATTCACAGAAGGATCGTGGAGCCCAGAGCTGCCTTTCGACAACATCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTCCTTTGGTGCCACCGGTGTaGTGCGCTCGCTCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: VIETRFRLWSGLLTQFIPLVPPV*CARSPG
Trigger: CCCCGGAGAGCGAGCGCACAACACCGGTGGCACCAA...AGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTGACCACGCCGCTGTATaGCAGGTAAGTGTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLADHAAV*QVSVGG
Trigger: ACCTCCCACACTTACCTGCAATACAGCGGCGTGGTC...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp AGGATGCCCTTGAGAGGGTCCATTGGAGCCGAGGCCAGGCTCAAGTaGAGGACTAAAAGGGTGAGTTTGGTTAGTACATCCAACACGTTC +
Preference number: 5 (lower is better)
Translates to: RMPLRGSIGAEARLK*RTKRVSLVSTSNTF
Trigger: GAACGTGTTGGATGTACTAACCAAACTCACCCTTTTAGTCCTGCACTTGAGCCTGGCCTCGGCTCCAATGGACCCTCTCAAGGGCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp GTTGTCGAAAGGCAGCTCTGGGCTCCACGATCCTTCTGTGAATGTTaGTCCACTGTTTCTCCTGTCAGAGCAGCTCACCGACTCCTTAAC +
Preference number: 5 (lower is better)
Translates to: VVERQLWAPRSFCEC*STVSPVRAAHRLLN
Trigger: GTTAAGGAGTCGGTGAGCTGCTCTGACAGGAGAAACAGTGGAGCAACATTCACAGAAGGATCGTGGAGCCCAGAGCTGCCTTTCGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTCCTGGCCGGGGGCGTCGGTaGGATGGTGTAGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VIETRFRLWSGLLTQFIPGRGRR*DGVEFL
Trigger: GAGGAACTCTACACCATCCAACCGACGCCCCCGGCC...AGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGGGCCGGGGGCGTCGGTaGGATGGTGTAGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VISDQETHREGHIAETIEGRGRR*DGVEFL
Trigger: GAGGAACTCTACACCATCCAACCGACGCCCCCGGCC...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTCTGGCAAAGAGTTCGTaGAGCATCCTGACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLALAKSS*SILTSS
Trigger: GGAGCTGGTCAGGATGCTCAACGAACTCTTTGCCAG...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GCCATTGGAGGCCAGAAGAAGGCATTGTATACCCCTGGAACTGGATTACAGACAGGTCTCCTCAGGAACTaGGATCCGGCCACTTACTCC +
Preference number: 5 (lower is better)
Translates to: AIGGQKKALYTPGTGLQTGLLRN*DPATYS
Trigger: GGAGTAAGTGGCCGGATCCAAGTTCCTGAGGAGACC...TGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 90 bp GGAACTGATGCTGCAGGTGCTCATCCTCCACATTGGTCATGTCGTTaGTCATTTCCAGGACGACAAACCTGGGGAGCACAGACAGCACAA +
Preference number: 5 (lower is better)
Translates to: GTDAAGAHPPHWSCR*SFPGRQTWGAQTAQ
Trigger: TTGTGCTGTCTGTGCTCCCCAGGTTTGTCGTCCTGGAAATGATCAACGACATGACCAATGTGGAGGATGAGCACCTGCAGCATCAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp TGTCTTTCTCCAGGAAGTGGCGGGCCACATGGCTGGGTAAGATATTaGGCAGCATGTTCTCGTTGTGTTCCCTCAGTTCCTTCATCTCGT +
Preference number: 5 (lower is better)
Translates to: CLSPGSGGPHGWVRY*AACSRCVPSVPSSR
Trigger: ACGAGATGAAGGAACTGAGGGAACACAACGAGAACATGCTGCGCAATATCTTACCCAGCCATGTGGCCCGCCACTTCCTGGAGAAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp ATGATGCCCGAATTGCTGTTCTCGTTGAGAAGTTGCTTCTGCCTTTaGCTGTTGAGAGACTGGACAAGGCCAAGGACAACCGCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: MMPELLFSLRSCFCL*LLRDWTRPRTTAAR
Trigger: TCTGGCTGCGGTTGTCCTTGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATTCGGGCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 90 bp CCTCATTGTCTCTGTCTTTCTCCAGGAAGTGGCGGGCCACATGGCTaGGTAAGATATTGCGCAGCATGTTCTCGTTGTGTTCCCTCAGTT +
Preference number: 5 (lower is better)
Translates to: PHCLCLSPGSGGPHG*VRYCAACSRCVPSV
Trigger: AACTGAGGGAACACAACGAGAACATGCTGCGCAATATCTTACCCAGCCATGTGGCCCGCCACTTCCTGGAGAAAGACAGAGACAATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTCCTAGCAGGATGCCCTaGAGAGGGTCCATTGGAGCC +
Preference number: 5 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSPSRMP*RGSIGA
Trigger: GGCTCCAATGGACCCTCTCAAGGGCATCCTGCTAGG...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCGACCACGCCGCTGTATaGCAGGTAAGTGTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LDTVLIQPRSICPGNGAADHAAV*QVSVGG
Trigger: ACCTCCCACACTTACCTGCAATACAGCGGCGTGGTC...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTGATGAATGGGTTGGGTaGGACTCGTCCCAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLADEWVG*DSSQEK
Trigger: TTTCTCCTGGGACGAGTCCAACCCAACCCATTCATC...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GCCATTGGAGGCCAGAAGAAGGCATTGTATACCCCTGGAACTGGATTACAGACAGGTAAGATGAATGGGTaGGGTTGGACTCGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: AIGGQKKALYTPGTGLQTGKMNG*GWTRPR
Trigger: CCTGGGACGAGTCCAACCCAACCCATTCATCTTACC...TGTCTGTAATCCAGTTCCAGGGGTATACAATGCCTTCTTCTGGCCTCCAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp CTCTTGATGATGCCCGAATTGCTGTTCTCGTTGAGAAGTTGCTTCTaGCTTTGCCTGTTGAGAGACTGGACAAGGCCAAGGACAACCGCA +
Preference number: 5 (lower is better)
Translates to: LLMMPELLFSLRSCF*LCLLRDWTRPRTTA
Trigger: TGCGGTTGTCCTTGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATTCGGGCATCATCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 90 bp AGCCAGAGTATTCTGTTTGCCCACGATGTTGTCGAAAGGCAGCTCTaGGCTCCACGATCCTTCTGTGAATGTTGCTCCACTGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SQSILFAHDVVERQL*APRSFCECCSTVSP
Trigger: AGGAGAAACAGTGGAGCAACATTCACAGAAGGATCGTGGAGCCCAGAGCTGCCTTTCGACAACATCGTGGGCAAACAGAATACTCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTTACTTGAAGGGTGACTaGCAGCAAAGATGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLAYLKGD*QQRCAQ
Trigger: CTGGGCACATCTTTGCTGCAAGTCACCCTTCAAGTA...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp TTCATGAGAGAAGAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCTCCAGATCCCGAGACTaGAAGGAGTTGCGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: FMREENVMQLPQGTSFSLSRSRD*KELRRV
Trigger: AACCCTACGCAACTCCTTCAAGTCTCGGGATCTGGA...GAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTCTTCTCTCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTTCGTTGATCTCCTCTTaGGCCTGTACGCGCCACAGG +
Preference number: 5 (lower is better)
Translates to: GVIETRFRLWSGLLTQFISLISS*ACTRHR
Trigger: CCTGTGGCGCGTACAGGCCAAAGAGGAGATCAACGA...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTCCTTCGTTGATCTCCTCTTaGGCCTGTACGCGCCACAGG +
Preference number: 5 (lower is better)
Translates to: VIETRFRLWSGLLTQFIPSLISS*ACTRHR
Trigger: CCTGTGGCGCGTACAGGCCAAAGAGGAGATCAACGA...AGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCCGCAGCATGTTCTCGTaGTGTTCCCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LDTVLIQPRSICPGNGAARSMFS*CSLSSF
Trigger: GAAGGAACTGAGGGAACACAACGAGAACATGCTGCG...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp ATCTTCTCCACTGTGGTTCAGGTTGTCATAACTCAGAAAGAGACCTaGGTAGATGGTCTCTGTGAGCAGGGCGTAGATGGCGATCATGAT +
Preference number: 5 (lower is better)
Translates to: IFSTVVQVVITQKET*VDGLCEQGVDGDHD
Trigger: ATCATGATCGCCATCTACGCCCTGCTCACAGAGACCATCTACGCAGGTCTCTTTCTGAGTTATGACAACCTGAACCACAGTGGAGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp ACATTCTACTCCCTGGTTGTTCATTTCTGTCTGAGAGTAGAAGTCTaGGAACCCAGGGATGGAGGCGAACATCACTCCAACAGCATCGTA +
Preference number: 5 (lower is better)
Translates to: TFYSLVVHFCLRVEV*EPRDGGEHHSNSIV
Trigger: TACGATGCTGTTGGAGTGATGTTCGCCTCCATCCCTGGGTTCGCAGACTTCTACTCTCAGACAGAAATGAACAACCAGGGAGTAGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 90 bp TGCCATTTCCTCAGGCCCAACACACCACATAGCACAGAACCTGAATaGATTCCAATTCGCATGTCAACATCGTGCTTCGTTCTGGATCTC +
Preference number: 5 (lower is better)
Translates to: CHFLRPNTPHSTEPE*IPIRMSTSCFVLDL
Trigger: GAGATCCAGAACGAAGCACGATGTTGACATGCGAATTGGAATCCATTCAGGTTCTGTGCTATGTGGTGTGTTGGGCCTGAGGAAATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GAGAATGTGATGCAGTTGCCCCAGGGAACTAGCTTCTCACTCCAACCATTGGCTTGCTCATCCTCCACATaGGTCATGTCGTTGATCATT +
Preference number: 5 (lower is better)
Translates to: ENVMQLPQGTSFSLQPLACSSST*VMSLII
Trigger: AATGATCAACGACATGACCAATGTGGAGGATGAGCA...AGCCAATGGTTGGAGTGAGAAGCTAGTTCCCTGGGGCAACTGCATCACATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGCTGGCAAAGAGTTCGTaGAGCATCCTGACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VISDQETHREGHIAETIELAKSS*SILTSS
Trigger: GGAGCTGGTCAGGATGCTCAACGAACTCTTTGCCAG...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGAAGCAGTGATGCTTCCTaGGTCCCCAGGAAATCTTCT +
Preference number: 5 (lower is better)
Translates to: GLCHMADVTLGVIETRFRSSDAS*VPRKSS
Trigger: AGAAGATTTCCTGGGGACCAAGGAAGCATCACTGCT...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CTCAGATCTCTGGCCTCCAGTAACTTAAACCATTCTCTCTCTCTCTCTCTCTCTCGCAGCATGTTCTCGTaGTGTTCCCTCAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LRSLASSNLNHSLSLSLSRSMFS*CSLSSF
Trigger: GAAGGAACTGAGGGAACACAACGAGAACATGCTGCG...AGAGAGAGAGAGAGAGAGAGAATGGTTTAAGTTACTGGAGGCCAGAGATCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGGGTCTCCTCAGGAACTaGGATCCGGCCACTTACTCC +
Preference number: 5 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEGLLRN*DPATYS
Trigger: GGAGTAAGTGGCCGGATCCAAGTTCCTGAGGAGACC...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTGGTAAGATGAATGGGTaGGGTTGGACTCGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: GVIETRFRLWSGLLTQFIGKMNG*GWTRPR
Trigger: CCTGGGACGAGTCCAACCCAACCCATTCATCTTACC...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp TCAAGCTTGTTTGCTATGTCCACATCCCAAGACCAGACATCAAACTaGCATTTCCTCAGGCCCAACACACCACATAGCACAGAACCTGAA +
Preference number: 5 (lower is better)
Translates to: SSLFAMSTSQDQTSN*HFLRPNTPHSTEPE
Trigger: TTCAGGTTCTGTGCTATGTGGTGTGTTGGGCCTGAGGAAATGGCAGTTTGATGTCTGGTCTTGGGATGTGGACATAGCAAACAAGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp GAGAAGTCAGCCAGGGCACACAAATGTCCCCATTTATCTTCACATTaGTGTTTCTCTGGGGACAGTCCTGAGACAGCCATGTATGTACTA +
Preference number: 5 (lower is better)
Translates to: EKSARAHKCPHLSSH*CFSGDSPETAMYVL
Trigger: TAGTACATACATGGCTGTCTCAGGACTGTCCCCAGAGAAACAGCAATGTGAAGATAAATGGGGACATTTGTGTGCCCTGGCTGACTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 90 bp GGTTGTTCATTTCTGTCTGAGAGTAGAAGTCTGCGAACCCAGGGATaGAGGCGAACATCACTCCAACAGCATCGTAGGATTGAGAATACA +
Preference number: 5 (lower is better)
Translates to: GCSFLSESRSLRTQG*RRTSLQQHRRIENT
Trigger: TGTATTCTCAATCCTACGATGCTGTTGGAGTGATGTTCGCCTCCATCCCTGGGTTCGCAGACTTCTACTCTCAGACAGAAATGAACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGCCTAGCAGGATGCCCTaGAGAGGGTCCATTGGAGCC +
Preference number: 5 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLPSRMP*RGSIGA
Trigger: GGCTCCAATGGACCCTCTCAAGGGCATCCTGCTAGG...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCAAGGTCGTAGAGAGGTaGGTAAATCCTTTGACATCT +
Preference number: 5 (lower is better)
Translates to: ADVTLGVIETRFRLWSGLKVVER*VNPLTS
Trigger: AGATGTCAAAGGATTTACCAACCTCTCTACGACCTT...GAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGAGAATACAGCTCCTCATaGTCTCTGTCTTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GLCHMADVTLGVIETRFREYSSS*SLSFSR
Trigger: CCTGGAGAAAGACAGAGACAATGAGGAGCTGTATTC...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTGATGAATGGGTTGGGTaGGACTCGTCCCAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GVIETRFRLWSGLLTQFIDEWVG*DSSQEK
Trigger: TTTCTCCTGGGACGAGTCCAACCCAACCCATTCATC...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp AGAAATGTGAATCCTCCCAGGGATTCCTCCAGACTCAAGCTTGTTTaGTATGTCCACATCCCAAGACCAGACATCAAACTGCCATTTCCT +
Preference number: 5 (lower is better)
Translates to: RNVNPPRDSSRLKLV*YVHIPRPDIKLPFP
Trigger: AGGAAATGGCAGTTTGATGTCTGGTCTTGGGATGTGGACATAGCAAACAAGCTTGAGTCTGGAGGAATCCCTGGGAGGATTCACATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp ATATGCTCTCTTCTCAACTTATCGCCACTCCGCAAGTCGATGGTATaGTCTATTCTCTTGTTAATTTCCTCAGGCCCAGACTGGACATGC +
Preference number: 5 (lower is better)
Translates to: ICSLLNLSPLRKSMV*SILLLISSGPDWTC
Trigger: GCATGTCCAGTCTGGGCCTGAGGAAATTAACAAGAGAATAGAGCATACCATCGACTTGCGGAGTGGCGATAAGTTGAGAAGAGAGCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTTACTTGAAGGGTGACTaGCAGCAAAGATGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GVIETRFRLWSGLLTQFIYLKGD*QQRCAQ
Trigger: CTGGGCACATCTTTGCTGCAAGTCACCCTTCAAGTA...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACATCAGTGAGAATGGCTaGATATGCTCTCTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDISENG*ICSLLN
Trigger: GTTGAGAAGAGAGCATATCAAGCCATTCTCACTGAT...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACTTCAAGGGTATCGACTaGTCAAAATCACACCACAGA +
Preference number: 5 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDFKGID*SKSHHR
Trigger: TCTGTGGTGTGATTTTGACAAGTCGATACCCTTGAA...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023007.7
CDS-3UTR CAA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACAACACAGCTGAGGAATaGAAAGTCAGGTTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDNTAEE*KVRFFK
Trigger: CTTGAAGAACCTGACTTTCAATTCCTCAGCTGTGTT...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023007.7
CDS-3UTR CAA 90 bp GTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTCCTTGGCTGGGTAAGATATaGCGCAGCATGTTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: VIETRFRLWSGLLTQFIPWLGKI*RSMFSL
Trigger: CAACGAGAACATGCTGCGCAATATCTTACCCAGCCA...AGGAATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CGTCACACTGGGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACATGCTTGTTGATCTCTaGTATGCTTTCAGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: RHTGSDRDKIQIVEWPLDMLVDL*YAFSQS
Trigger: GCTCTGACTGAAAGCATACAAGAGATCAACAAGCAT...GTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCCCAGTGTGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCAAAGTTGCTTCTGCCTTaGCCTGTTGAGAGACTGGAC +
Preference number: 5 (lower is better)
Translates to: PTIGFLIVPPRMYPREFAKLLLP*PVERLD
Trigger: GTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACTT...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGAGCAGTGATGCTTCCTaGGTCCCCAGGAAATCTTCT +
Preference number: 5 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKESSDAS*VPRKSS
Trigger: AGAAGATTTCCTGGGGACCAAGGAAGCATCACTGCT...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGTGTGTACTCCAGCTGTaGTCCATGGTAGAACACAGC +
Preference number: 5 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKECVLQL*SMVEHS
Trigger: GCTGTGTTCTACCATGGACAACAGCTGGAGTACACA...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGGAATACAGCTCCTCATaGTCTCTGTCTTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VISDQETHREGHIAETIEEYSSS*SLSFSR
Trigger: CCTGGAGAAAGACAGAGACAATGAGGAGCTGTATTC...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp TTAGATACTGTTCTTATACAGCCTAGAAGCATTTGCCCAGGGAATGGTGCCGCCATGCTTGTTGATCTCTaGTATGCTTTCAGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: LDTVLIQPRSICPGNGAAMLVDL*YAFSQS
Trigger: GCTCTGACTGAAAGCATACAAGAGATCAACAAGCAT...GGCGGCACCATTCCCTGGGCAAATGCTTCTAGGCTGTATAAGAACAGTATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGTTTATGCCACATGGCTGACGTCACACTGGGAGTGATAGAGACAAGATTCAGATTTGATTTTCCCTTCTaGTTCACTGATGCCCTTCAC +
Preference number: 5 (lower is better)
Translates to: GLCHMADVTLGVIETRFRFDFPF*FTDALH
Trigger: GTGAAGGGCATCAGTGAACAAGAAGGGAAAATCAAA...TCTGAATCTTGTCTCTATCACTCCCAGTGTGACGTCAGCCATGTGGCATAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGTTCTGCCTTTGCCTGTaGAGAGACTGGACAAGGCCA +
Preference number: 5 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMFCLCL*RDWTRP
Trigger: TGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAA...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 90 bp CATTTGAGAATACTTGTGCTCCAGGCTGGAGTCTTTAAACATCAGTaGGAATGGCTTGATATGCTCTCTTCTCAACTTATCGCCACTCCG +
Preference number: 5 (lower is better)
Translates to: HLRILVLQAGVFKHQ*EWLDMLSSQLIATP
Trigger: CGGAGTGGCGATAAGTTGAGAAGAGAGCATATCAAGCCATTCTCACTGATGTTTAAAGACTCCAGCCTGGAGCACAAGTATTCTCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGTCCAGATCCCGAGACTaGAAGGAGTTGCGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLSRSRD*KELRRV
Trigger: AACCCTACGCAACTCCTTCAAGTCTCGGGATCTGGA...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGTTCTGCCTTTGCCTGTaGAGAGACTGGACAAGGCCA +
Preference number: 5 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLFCLCL*RDWTRP
Trigger: TGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAA...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGACATTGGTCATGTCGTaGATCATTTCCAGGACGACA +
Preference number: 5 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKETLVMS*IISRTT
Trigger: TGTCGTCCTGGAAATGATCAACGACATGACCAATGT...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGCAGACTCAAGCTTGTTaGCTATGTCCACATCCCAAG +
Preference number: 5 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMQTQAC*LCPHPK
Trigger: CTTGGGATGTGGACATAGCAAACAAGCTTGAGTCTG...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTATCAGTGAGAATGGCTaGATATGCTCTCTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: GVIETRFRLWSGLLTQFIISENG*ICSLLN
Trigger: GTTGAGAAGAGAGCATATCAAGCCATTCTCACTGAT...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGAGTGATAGAGACAAGATTCAGATTGTGGAGTGGCCTCTTGACACAGTTCATTTACTTCATCCCTCATTaGAGAATACTTGTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GVIETRFRLWSGLLTQFIYFIPH*RILVLQ
Trigger: CTGGAGCACAAGTATTCTCAAATGAGGGATGAAGTA...AATGAACTGTGTCAAGAGGCCACTCCACAATCTGAATCTTGTCTCTATCACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCAAACAGCATCGTAGGATaGAGAATACAGCTCCTCATT +
Preference number: 5 (lower is better)
Translates to: PTIGFLIVPPRMYPREFANSIVG*RIQLLI
Trigger: AATGAGGAGCTGTATTCTCAATCCTACGATGCTGTT...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 90 bp GAAGACAAAGTACTCTGGGTAGGAGCAGATATCTGTAAACACAGCTaGGGAATTGAAAGTCAGGTTCTTCAAGGGTATCGACTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: EDKVLWVGADICKHS*GIESQVLQGYRLVK
Trigger: TTTGACAAGTCGATACCCTTGAAGAACCTGACTTTCAATTCCTCAGCTGTGTTTACAGATATCTGCTCCTACCCAGAGTACTTTGTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023007.7
CDS-3UTR CAA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGAGAAATCCGAGTTACTaGGGGCACAGTCAAGGTGTA +
Preference number: 5 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLRNPSY*GHSQGV
Trigger: TACACCTTGACTGTGCCCCAAGTAACTCGGATTTCT...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GTGATCTCTGACCAGGAAACTCACAGAGAAGGACATATAGCAGAAACCATAGAGCTTGTGCGAGATGGTTaGGAAGCAGATTTATTGAAT +
Preference number: 5 (lower is better)
Translates to: VISDQETHREGHIAETIELVRDG*EADLLN
Trigger: ATTCAATAAATCTGCTTCCAAACCATCTCGCACAAG...CTCTATGGTTTCTGCTATATGTCCTTCTCTGTGAGTTTCCTGGTCAGAGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGTACTTCATCCCTCATTaGAGAATACTTGTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEYFIPH*RILVLQ
Trigger: CTGGAGCACAAGTATTCTCAAATGAGGGATGAAGTA...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CCAACCATTGGCTTTCTAATTGTTCCTCCAAGAATGTACCCTAGGGAGTTTGCACAGACCAAGTTTGACTaGAATACTTCATCCCTCATT +
Preference number: 5 (lower is better)
Translates to: PTIGFLIVPPRMYPREFAQTKFD*NTSSLI
Trigger: AATGAGGGATGAAGTATTCAAGTCAAACTTGGTCTG...TGCAAACTCCCTAGGGTACATTCTTGGAGGAACAATTAGAAAGCCAATGGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CCAGAAGTTACTAAGCACCCAATAACATCAAGGTTCTATTTACACATGCTCTTTTGTGTACTCCAGCTGTaGTCCATGGTAGAACACAGC +
Preference number: 5 (lower is better)
Translates to: PEVTKHPITSRFYLHMLFCVLQL*SMVEHS
Trigger: GCTGTGTTCTACCATGGACAACAGCTGGAGTACACA...AAAGAGCATGTGTAAATAGAACCTTGATGTTATTGGGTGCTTAGTAACTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp GGTTTATTTCAGTTACAGGTTAGAATCCACCATTGGAGAAAGTCAGGGAAGGAGTTTGATTTTCCCTTCTaGTTCACTGATGCCCTTCAC +
Preference number: 5 (lower is better)
Translates to: GLFQLQVRIHHWRKSGKEFDFPF*FTDALH
Trigger: GTGAAGGGCATCAGTGAACAAGAAGGGAAAATCAAA...CTCCTTCCCTGACTTTCTCCAATGGTGGATTCTAACCTGTAACTGAAATAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 90 bp GTATGCTCTATTCTCTTGTTAATTTCCTCAGGCCCAGACTGGACATaGAAAGCTTGTGCGAGATGGTTTGGAAGCAGATTTATTGAATTT +
Preference number: 5 (lower is better)
Translates to: VCSILLLISSGPDWT*KACARWFGSRFIEF
Trigger: AAATTCAATAAATCTGCTTCCAAACCATCTCGCACAAGCTTTGCATGTCCAGTCTGGGCCTGAGGAAATTAACAAGAGAATAGAGCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp ACATATAGCAGAAACCATAGAGGACATTTGCTCTGTGACTCAATCATAGGTTTGTGCTCATCCTCCACATaGGTCATGTCGTTGATCATT +
Preference number: 5 (lower is better)
Translates to: TYSRNHRGHLLCDSIIGLCSSST*VMSLII
Trigger: AATGATCAACGACATGACCAATGTGGAGGATGAGCA...CAAACCTATGATTGAGTCACAGAGCAAATGTCCTCTATGGTTTCTGCTATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGAAGGTCGTAGAGAGGTaGGTAAATCCTTTGACATCT +
Preference number: 5 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMKVVER*VNPLTS
Trigger: AGATGTCAAAGGATTTACCAACCTCTCTACGACCTT...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp AATTCTGGCACGTTTCAGCTTTCATATCTGTATTCCTTGCTGTCTGTGTTCATGACAAACCTGATAGTTTaGATCATGCTGAGGCCCATT +
Preference number: 5 (lower is better)
Translates to: NSGTFQLSYLYSLLSVFMTNLIV*IMLRPI
Trigger: AATGGGCCTCAGCATGATCAAAACTATCAGGTTTGT...CATGAACACAGACAGCAAGGAATACAGATATGAAAGCTGAAACGTGCCAGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CCAGAAGTTACTAAGCACCCAATAACATCAAGGTTCTATTTACACATGCTCTTTCAGACTCAAGCTTGTTaGCTATGTCCACATCCCAAG +
Preference number: 5 (lower is better)
Translates to: PEVTKHPITSRFYLHMLFQTQAC*LCPHPK
Trigger: CTTGGGATGTGGACATAGCAAACAAGCTTGAGTCTG...AAAGAGCATGTGTAAATAGAACCTTGATGTTATTGGGTGCTTAGTAACTTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGTGGCTGGGTAAGATATaGCGCAGCATGTTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWWLGKI*RSMFSL
Trigger: CAACGAGAACATGCTGCGCAATATCTTACCCAGCCA...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 90 bp AACTGGATAGTCATAGGCATCAGCCTTGAAGAAGGAAGCAAACTTTaGATTGCAGTGATAAACAGAAGAACGATAAATGCACAGACCAAG +
Preference number: 5 (lower is better)
Translates to: NWIVIGISLEEGSKL*IAVINRRTINAQTK
Trigger: CTTGGTCTGTGCATTTATCGTTCTTCTGTTTATCACTGCAATTCAAAGTTTGCTTCCTTCTTCAAGGCTGATGCCTATGACTATCCAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGACATTGGTCATGTCGTaGATCATTTCCAGGACGACA +
Preference number: 5 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWTLVMS*IISRTT
Trigger: TGTCGTCCTGGAAATGATCAACGACATGACCAATGT...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp CCAGAAGTTACTAAGCACCCAATAACATCAAGGTTCTATTTACACATGCTCTTTACAAACCTGATAGTTTaGATCATGCTGAGGCCCATT +
Preference number: 5 (lower is better)
Translates to: PEVTKHPITSRFYLHMLFTNLIV*IMLRPI
Trigger: AATGGGCCTCAGCATGATCAAAACTATCAGGTTTGT...AAAGAGCATGTGTAAATAGAACCTTGATGTTATTGGGTGCTTAGTAACTTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGTATGGCAAATCGGATTaGTCAGTGCCTTCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWYGKSD*SVPSAC
Trigger: ACAAGCTGAAGGCACTGACAAATCCGATTTGCCATA...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 90 bp AATTGCAGTGATAAACAGAAGAACGATAAATGCACAGACCAAGTTTaGCTTGAATACTTCATCCCTCATTTGAGAATACTTGTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: NCSDKQKNDKCTDQV*LEYFIPHLRILVLQ
Trigger: CTGGAGCACAAGTATTCTCAAATGAGGGATGAAGTATTCAAGTCAAACTTGGTCTGTGCATTTATCGTTCTTCTGTTTATCACTGCAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGAACAGCATCGTAGGATaGAGAATACAGCTCCTCATT +
Preference number: 5 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWNSIVG*RIQLLI
Trigger: AATGAGGAGCTGTATTCTCAATCCTACGATGCTGTT...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS-3UTR CAA 90 bp AATCTTTTATTGTGCTTTAGTTGCTACACGGAATGGTCATTAGTTAAAGCATGGCAGACCAAGTTTGACTaGAATACTTCATCCCTCATT +
Preference number: 5 (lower is better)
Translates to: NLLLCFSCYTEWSLVKAWQTKFD*NTSSLI
Trigger: AATGAGGGATGAAGTATTCAAGTCAAACTTGGTCTG...CCATGCTTTAACTAATGACCATTCCGTGTAGCAACTAAAGCACAATAAAAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp GTGATGTGCCGCACCGCCGTCTGCCACAGCAGCCGCTaGGGCCGAGAGCCGCTCCCGTCGTCGCCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: VMCRTAVCHSSR*GREPLPSSPAG
Trigger: CCCGGCCGGCGACGACGGGAGCGGCTCTCGGCCGCAGCGGCTGCTGTGGCAGACGGCGGTGCGGCACATCAC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 72 bp CGGGAGACCCCGCCGCCGCCGCCGCCTCGGTGCCCGTaGATGAAGCGCTGCTCCGTGATGTGCCGCACCGCC +
Preference number: 6 (lower is better)
Translates to: RETPPPPPPRCP*MKRCSVMCRTA
Trigger: GGCGGTGCGGCACATCACGGAGCAGCGCTTCATCCACGGGCACCGAGGCGGCGGCGGCGGCGGGGTCTCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp GCTTTGCGGGAGACCCCGCCGCCGCCGCCGCCTCGGTaGCCGTGGATGAAGCGCTGCTCCGTGATGTGCCGC +
Preference number: 6 (lower is better)
Translates to: ALRETPPPPPPR*PWMKRCSVMCR
Trigger: GCGGCACATCACGGAGCAGCGCTTCATCCACGGGCACCGAGGCGGCGGCGGCGGCGGGGTCTCCCGCAAAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp GGTGATTGGGTCCACTGCCCGCAGGGTTCGAGGCTTTaGGGGAGACCCCGCCGCCGCCGCCGCCTCGGTGCC +
Preference number: 6 (lower is better)
Translates to: GDWVHCPQGSRL*GRPRRRRRLGA
Trigger: GGCACCGAGGCGGCGGCGGCGGCGGGGTCTCCCGCAAAGCCTCGAACCCTGCGGGCAGTGGACCCAATCACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp ATGAAGCGCTGCTCCGTGATGTGCCGCACCGCCGTCTaGCACAGCAGCCGCTGCGGCCGAGAGCCGCTCCCG +
Preference number: 6 (lower is better)
Translates to: MKRCSVMCRTAV*HSSRCGREPLP
Trigger: CGGGAGCGGCTCTCGGCCGCAGCGGCTGCTGTGGCAGACGGCGGTGCGGCACATCACGGAGCAGCGCTTCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp CCTCGGTGCCCGTGGATGAAGCGCTGCTCCGTGATGTaGCGCACCGCCGTCTGCCACAGCAGCCGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: PRCPWMKRCSVM*RTAVCHSSRCG
Trigger: GCCGCAGCGGCTGCTGTGGCAGACGGCGGTGCGGCACATCACGGAGCAGCGCTTCATCCACGGGCACCGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp AGCCCAAGTCGCCCCCGCCCCCGCTGCCACTGGCACTaGCGCTCCCGCTGCGTTCCGGAAAGACTTTGGTGC +
Preference number: 6 (lower is better)
Translates to: SPSRPRPRCHWH*RSRCVPERLWC
Trigger: GCACCAAAGTCTTTCCGGAACGCAGCGGGAGCGGCAGTGCCAGTGGCAGCGGGGGCGGGGGCGACTTGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp CAAGGTGTAGGAAGCCCAAGTCGCCCCCGCCCCCGCTaGCACTGGCACTGCCGCTCCCGCTGCGTTCCGGAA +
Preference number: 6 (lower is better)
Translates to: QGVGSPSRPRPR*HWHCRSRCVPE
Trigger: TTCCGGAACGCAGCGGGAGCGGCAGTGCCAGTGGCAGCGGGGGCGGGGGCGACTTGGGCTTCCTACACCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp CTGCGGCCGAGAGCCGCTCCCGTCGTCGCCGGCCGGGGGCGTCGGTaGGATGGTGTAGAGTTCCTCGCTGCCACTAAGGCAGTGCACATC +
Preference number: 6 (lower is better)
Translates to: LRPRAAPVVAGRGRR*DGVEFLAATKAVHI
Trigger: GATGTGCACTGCCTTAGTGGCAGCGAGGAACTCTACACCATCCAACCGACGCCCCCGGCCGGCGACGACGGGAGCGGCTCTCGGCCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp CACTGCCGCTCCCGCTGCGTTCCGGAAAGACTTTGGTaGCACCGGTGTTGTGCGCTCGCTCTCCGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: HCRSRCVPERLW*HRCCALALRGP
Trigger: TGGGCCCCGGAGAGCGAGCGCACAACACCGGTGGCACCAAAGTCTTTCCGGAACGCAGCGGGAGCGGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 72 bp TGGCACTGCCGCTCCCGCTGCGTTCCGGAAAGACTTTaGTGCCACCGGTGTTGTGCGCTCGCTCTCCGGGGC +
Preference number: 6 (lower is better)
Translates to: WHCRSRCVPERL*CHRCCALALRG
Trigger: GCCCCGGAGAGCGAGCGCACAACACCGGTGGCACCAAAGTCTTTCCGGAACGCAGCGGGAGCGGCAGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp AGAGCCGCTCCCGTCGTCGCCGGCCGGGGGCGTCGGTaGGATGGTGTAGAGTTCCTCGCTGCCACTAAGGCA +
Preference number: 6 (lower is better)
Translates to: RAAPVVAGRGRR*DGVEFLAATKA
Trigger: TGCCTTAGTGGCAGCGAGGAACTCTACACCATCCAACCGACGCCCCCGGCCGGCGACGACGGGAGCGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp CTGGCACTGCCGCTCCCGCTGCGTTCCGGAAAGACTTaGGTGCCACCGGTGTTGTGCGCTCGCTCTCCGGGG +
Preference number: 6 (lower is better)
Translates to: LALPLPLRSGKT*VPPVLCARSPG
Trigger: CCCCGGAGAGCGAGCGCACAACACCGGTGGCACCAAAGTCTTTCCGGAACGCAGCGGGAGCGGCAGTGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 72 bp GGCAGCACCGAGTCGCTAGACAGCTGCGGCGCGTGGTaGTTGGGTCCACTGCCCGCAGGGTTCGAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: GSTESLDSCGAW*LGPLPAGFEAL
Trigger: CAAAGCCTCGAACCCTGCGGGCAGTGGACCCAATCACCACGCGCCGCAGCTGTCTAGCGACTCGGTGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp GCCTATGCCGTCGCCCAGAAGCCCATAGCCCAGGCCTaGTGCCAGAATCTGGGTGGTCATAGCCACCCAAGT +
Preference number: 6 (lower is better)
Translates to: AYAVAQKPIAQA*CQNLGGHSHPS
Trigger: ACTTGGGTGGCTATGACCACCCAGATTCTGGCAGCAGGCCTGGGCTATGGGCTTCTGGGCGACGGCATAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp CAGATCACCACCTCGATGCCAGTGAAAAAGCCTAGCAGGATGCCCTaGAGAGGGTCCATTGGAGCCGAGGCCAGGCTCAAGTGCAGGACT +
Preference number: 6 (lower is better)
Translates to: QITTSMPVKKPSRMP*RGSIGAEARLKCRT
Trigger: AGTCCTGCACTTGAGCCTGGCCTCGGCTCCAATGGACCCTCTCAAGGGCATCCTGCTAGGCTTTTTCACTGGCATCGAGGTGGTGATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 72 bp GTTTTGATCATGCTGAGGCCCATTTCAACACAGCAATaGGCGTGGTCCCGGCGGGGCTCAGGCAGTCCAGAC +
Preference number: 6 (lower is better)
Translates to: VLIMLRPISTQQ*AWSRRGSGSPD
Trigger: GTCTGGACTGCCTGAGCCCCGCCGGGACCACGCTCATTGCTGTGTTGAAATGGGCCTCAGCATGATCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp CAGAATCTGGGTGGTCATAGCCACCCAAGTGACCACGCCGCTGTATaGCAGGTAAGTGTGGGAGGTGTTGTCCTTCCTGACCACCACGAG +
Preference number: 6 (lower is better)
Translates to: QNLGGHSHPSDHAAV*QVSVGGVVLPDHHE
Trigger: CTCGTGGTGGTCAGGAAGGACAACACCTCCCACACTTACCTGCAATACAGCGGCGTGGTCACTTGGGTGGCTATGACCACCCAGATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp GGCAAAGCCCTGGTCCTTCAGGATAAGGTAGGTCTCCTCAGGAACTaGGATCCGGCCACTTACTCCCGTGCTGTCCATTCGGCTTGCCAA +
Preference number: 6 (lower is better)
Translates to: GKALVLQDKVGLLRN*DPATYSRAVHSACQ
Trigger: TTGGCAAGCCGAATGGACAGCACGGGAGTAAGTGGCCGGATCCAAGTTCCTGAGGAGACCTACCTTATCCTGAAGGACCAGGGCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp TACCTCCGATTTGCGCCTCTGGCCCAGGAAATAGCGTaGGTAGAGGCGCTCCAGATCCCGAGACTTGAAGGA +
Preference number: 6 (lower is better)
Translates to: YLRFAPLAQEIA*VEALQIPRLEG
Trigger: TCCTTCAAGTCTCGGGATCTGGAGCGCCTCTACCAACGCTATTTCCTGGGCCAGAGGCGCAAATCGGAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp GGTGGTCATAGCCACCCAAGTGACCACGCCGCTGTATaGCAGGTAAGTGTGGGAGGTGTTGTCCTTCCTGAC +
Preference number: 6 (lower is better)
Translates to: GGHSHPSDHAAV*QVSVGGVVLPD
Trigger: GTCAGGAAGGACAACACCTCCCACACTTACCTGCAATACAGCGGCGTGGTCACTTGGGTGGCTATGACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp CCAGGAAGTGGCGGGCCACATGGCTGGGTAAGATATTaGGCAGCATGTTCTCGTTGTGTTCCCTCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: PGSGGPHGWVRY*AACSRCVPSVP
Trigger: AGGAACTGAGGGAACACAACGAGAACATGCTGCGCAATATCTTACCCAGCCATGTGGCCCGCCACTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp CTGGTCCTTCAGGATAAGGTAGGTCTCCTCAGGAACTaGGATCCGGCCACTTACTCCCGTGCTGTCCATTCG +
Preference number: 6 (lower is better)
Translates to: LVLQDKVGLLRN*DPATYSRAVHS
Trigger: CGAATGGACAGCACGGGAGTAAGTGGCCGGATCCAAGTTCCTGAGGAGACCTACCTTATCCTGAAGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp TTCTCGTTGTGTTCCCTCAGTTCCTTCATCTCGTTGATCTCCTCTTaGGCCTGTACGCGCCACAGGAAATCCAGGCGGGCTGTGTACTCC +
Preference number: 6 (lower is better)
Translates to: FSLCSLSSFISLISS*ACTRHRKSRRAVYS
Trigger: GGAGTACACAGCCCGCCTGGATTTCCTGTGGCGCGTACAGGCCAAAGAGGAGATCAACGAGATGAAGGAACTGAGGGAACACAACGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp TTGCGCAGCATGTTCTCGTTGTGTTCCCTCAGTTCCTTCATCTCGTaGATCTCCTCTTTGGCCTGTACGCGCCACAGGAAATCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: LRSMFSLCSLSSFIS*ISSLACTRHRKSRR
Trigger: CCGCCTGGATTTCCTGTGGCGCGTACAGGCCAAAGAGGAGATCAACGAGATGAAGGAACTGAGGGAACACAACGAGAACATGCTGCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 72 bp GCTGCAGGTGCTCATCCTCCACATTGGTCATGTCGTTaGTCATTTCCAGGACGACAAACCTGGGGAGCACAG +
Preference number: 6 (lower is better)
Translates to: AAGAHPPHWSCR*SFPGRQTWGAQ
Trigger: CTGTGCTCCCCAGGTTTGTCGTCCTGGAAATGATCAACGACATGACCAATGTGGAGGATGAGCACCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 72 bp GAGAGTATTGCCCGGGAAGTCTCCTTGGGGGTAAGATaGATGGGTTGGGTTGGACTCGTCCCAGGAGAAAGT +
Preference number: 6 (lower is better)
Translates to: ESIAREVSLGVR*MGWVGLVPGES
Trigger: ACTTTCTCCTGGGACGAGTCCAACCCAACCCATTCATCTTACCCCCAAGGAGACTTCCCGGGCAATACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp TCTCCTCAGGAACTTGGATCCGGCCACTTACTCCCGTaGTGTCCATTCGGCTTGCCAAGTTCACAGTTTTCC +
Preference number: 6 (lower is better)
Translates to: SPQELGSGHLLP*CPFGLPSSQFS
Trigger: GGAAAACTGTGAACTTGGCAAGCCGAATGGACAGCACGGGAGTAAGTGGCCGGATCCAAGTTCCTGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp GTTAGGGCAGCCAGAGTATTCTGTTTGCCCACGATGTaGTCGAAAGGCAGCTCTGGGCTCCACGATCCTTCT +
Preference number: 6 (lower is better)
Translates to: VRAARVFCLPTM*SKGSSGLHDPS
Trigger: AGAAGGATCGTGGAGCCCAGAGCTGCCTTTCGACAACATCGTGGGCAAACAGAATACTCTGGCTGCCCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp CTGTCTTTCTCCAGGAAGTGGCGGGCCACATGGCTGGGTAAGATATaGCGCAGCATGTTCTCGTTGTGTTCCCTCAGTTCCTTCATCTCG +
Preference number: 6 (lower is better)
Translates to: LSFSRKWRATWLGKI*RSMFSLCSLSSFIS
Trigger: CGAGATGAAGGAACTGAGGGAACACAACGAGAACATGCTGCGCAATATCTTACCCAGCCATGTGGCCCGCCACTTCCTGGAGAAAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp GATGATGCCCGAATTGCTGTTCTCGTTGAGAAGTTGCTTCTGCCTTaGCCTGTTGAGAGACTGGACAAGGCCAAGGACAACCGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: DDARIAVLVEKLLLP*PVERLDKAKDNRSQ
Trigger: CTGGCTGCGGTTGTCCTTGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATTCGGGCATCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 72 bp TTGATGGAAAAGACCGCTAGCCTGGGTATGAGTACTTaGAGGGTGACTTGCAGCAAAGATGTGCCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: LMEKTASLGMST*RVTCSKDVPRP
Trigger: CGGCCTGGGCACATCTTTGCTGCAAGTCACCCTTCAAGTACTCATACCCAGGCTAGCGGTCTTTTCCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 72 bp CTCTGTCTTTCTCCAGGAAGTGGCGGGCCACATGGCTaGGTAAGATATTGCGCAGCATGTTCTCGTTGTGTT +
Preference number: 6 (lower is better)
Translates to: LCLSPGSGGPHG*VRYCAACSRCV
Trigger: AACACAACGAGAACATGCTGCGCAATATCTTACCCAGCCATGTGGCCCGCCACTTCCTGGAGAAAGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp TGCTGCAGGTGCTCATCCTCCACATTGGTCATGTCGTaGATCATTTCCAGGACGACAAACCTGGGGAGCACA +
Preference number: 6 (lower is better)
Translates to: CCRCSSSTLVMS*IISRTTNLGST
Trigger: TGTGCTCCCCAGGTTTGTCGTCCTGGAAATGATCAACGACATGACCAATGTGGAGGATGAGCACCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp TGCCCGGGAAGTCTCCTTGGGGGTAAGATGAATGGGTaGGGTTGGACTCGTCCCAGGAGAAAGTATGTTTTG +
Preference number: 6 (lower is better)
Translates to: CPGSLLGGKMNG*GWTRPRRKYVL
Trigger: CAAAACATACTTTCTCCTGGGACGAGTCCAACCCAACCCATTCATCTTACCCCCAAGGAGACTTCCCGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp CCCGAATTGCTGTTCTCGTTGAGAAGTTGCTTCTGCCTTTGCCTGTaGAGAGACTGGACAAGGCCAAGGACAACCGCAGCCAGAGAGTAT +
Preference number: 6 (lower is better)
Translates to: PELLFSLRSCFCLCL*RDWTRPRTTAAREY
Trigger: ATACTCTCTGGCTGCGGTTGTCCTTGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp ATTGGAGCCGAGGCCAGGCTCAAGTGCAGGACTAAAAGGGTGAGTTaGGTTAGTACATCCAACACGTTCATCACTACCTCCGATTTGCGC +
Preference number: 6 (lower is better)
Translates to: IGAEARLKCRTKRVS*VSTSNTFITTSDLR
Trigger: GCGCAAATCGGAGGTAGTGATGAACGTGTTGGATGTACTAACCAAACTCACCCTTTTAGTCCTGCACTTGAGCCTGGCCTCGGCTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 72 bp GAAACACAGCACAGGTCACCATGGCCAACACCCCAGTaGAGACAAAGTACTCTGGGTAGGAGCAGATATCTG +
Preference number: 6 (lower is better)
Translates to: ETQHRSPWPTPQ*RQSTLGRSRYL
Trigger: CAGATATCTGCTCCTACCCAGAGTACTTTGTCTTCACTGGGGTGTTGGCCATGGTGACCTGTGCTGTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023007.7
CDS GCA 72 bp TTAGTACATCCAACACGTTCATCACTACCTCCGATTTaGGCCTCTGGCCCAGGAAATAGCGTTGGTAGAGGC +
Preference number: 6 (lower is better)
Translates to: LVHPTRSSLPPI*ASGPGNSVGRG
Trigger: GCCTCTACCAACGCTATTTCCTGGGCCAGAGGCGCAAATCGGAGGTAGTGATGAACGTGTTGGATGTACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp ACTGTGGTTCAGGTTGTCATAACTCAGAAAGAGACCTaGGTAGATGGTCTCTGTGAGCAGGGCGTAGATGGC +
Preference number: 6 (lower is better)
Translates to: TVVQVVITQKET*VDGLCEQGVDG
Trigger: GCCATCTACGCCCTGCTCACAGAGACCATCTACGCAGGTCTCTTTCTGAGTTATGACAACCTGAACCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp GCCAGGGCACACAAATGTCCCCATTTATCTTCACATTaGTGTTTCTCTGGGGACAGTCCTGAGACAGCCATG +
Preference number: 6 (lower is better)
Translates to: ARAHKCPHLSSH*CFSGDSPETAM
Trigger: CATGGCTGTCTCAGGACTGTCCCCAGAGAAACAGCAATGTGAAGATAAATGGGGACATTTGTGTGCCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp ATGCCCGAATTGCTGTTCTCGTTGAGAAGTTGCTTCTaGCTTTGCCTGTTGAGAGACTGGACAAGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: MPELLFSLRSCF*LCLLRDWTRPR
Trigger: CCTTGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATTCGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp ATACACATGAATAGCACCACCTGGGCCAGGACCTGGTaGATGGAAAAGACCGCTAGCCTGGGTATGAGTACT +
Preference number: 6 (lower is better)
Translates to: IHMNSTTWARTW*MEKTASLGMST
Trigger: AGTACTCATACCCAGGCTAGCGGTCTTTTCCATCAACCAGGTCCTGGCCCAGGTGGTGCTATTCATGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp GTAATGGCTCTTGATGATGCCCGAATTGCTGTTCTCGTTGAGAAGTaGCTTCTGCCTTTGCCTGTTGAGAGACTGGACAAGGCCAAGGAC +
Preference number: 6 (lower is better)
Translates to: VMALDDARIAVLVEK*LLPLPVERLDKAKD
Trigger: GTCCTTGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATTCGGGCATCATCAAGAGCCATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 72 bp TGTTCTCGTTGTGTTCCCTCAGTTCCTTCATCTCGTTaGTCTCCTCTTTGGCCTGTACGCGCCACAGGAAAT +
Preference number: 6 (lower is better)
Translates to: CSRCVPSVPSSR*SPLWPVRATGN
Trigger: ATTTCCTGTGGCGCGTACAGGCCAAAGAGGAGATCAACGAGATGAAGGAACTGAGGGAACACAACGAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp GAATTGCTGTTCTCGTTGAGAAGTTGCTTCTGCCTTTaGCTGTTGAGAGACTGGACAAGGCCAAGGACAACC +
Preference number: 6 (lower is better)
Translates to: ELLFSLRSCFCL*LLRDWTRPRTT
Trigger: GGTTGTCCTTGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 72 bp TTTCTGTCTGAGAGTAGAAGTCTGCGAACCCAGGGATaGAGGCGAACATCACTCCAACAGCATCGTAGGATT +
Preference number: 6 (lower is better)
Translates to: FLSESRSLRTQG*RRTSLQQHRRI
Trigger: AATCCTACGATGCTGTTGGAGTGATGTTCGCCTCCATCCCTGGGTTCGCAGACTTCTACTCTCAGACAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp GAGGCCAGGCTCAAGTGCAGGACTAAAAGGGTGAGTTaGGTTAGTACATCCAACACGTTCATCACTACCTCC +
Preference number: 6 (lower is better)
Translates to: EARLKCRTKRVS*VSTSNTFITTS
Trigger: GGAGGTAGTGATGAACGTGTTGGATGTACTAACCAAACTCACCCTTTTAGTCCTGCACTTGAGCCTGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp CGAATTGCTGTTCTCGTTGAGAAGTTGCTTCTGCCTTaGCCTGTTGAGAGACTGGACAAGGCCAAGGACAAC +
Preference number: 6 (lower is better)
Translates to: RIAVLVEKLLLP*PVERLDKAKDN
Trigger: GTTGTCCTTGGCCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATTCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp CTCAACTTATCGCCACTCCGCAAGTCGATGGTATGCTCTATTCTCTaGTTAATTTCCTCAGGCCCAGACTGGACATGCAAAGCTTGTGCG +
Preference number: 6 (lower is better)
Translates to: LNLSPLRKSMVCSIL*LISSGPDWTCKACA
Trigger: CGCACAAGCTTTGCATGTCCAGTCTGGGCCTGAGGAAATTAACAAGAGAATAGAGCATACCATCGACTTGCGGAGTGGCGATAAGTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp TTTGCTATGTCCACATCCCAAGACCAGACATCAAACTaGCATTTCCTCAGGCCCAACACACCACATAGCACA +
Preference number: 6 (lower is better)
Translates to: FAMSTSQDQTSN*HFLRPNTPHST
Trigger: TGTGCTATGTGGTGTGTTGGGCCTGAGGAAATGGCAGTTTGATGTCTGGTCTTGGGATGTGGACATAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp AATCCTCCCAGGGATTCCTCCAGACTCAAGCTTGTTTaGTATGTCCACATCCCAAGACCAGACATCAAACTG +
Preference number: 6 (lower is better)
Translates to: NPPRDSSRLKLV*YVHIPRPDIKL
Trigger: CAGTTTGATGTCTGGTCTTGGGATGTGGACATAGCAAACAAGCTTGAGTCTGGAGGAATCCCTGGGAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp TTGATGATGCCCGAATTGCTGTTCTCGTTGAGAAGTTaGTTCTGCCTTTGCCTGTTGAGAGACTGGACAAGG +
Preference number: 6 (lower is better)
Translates to: LMMPELLFSLRS*FCLCLLRDWTR
Trigger: CCTTGTCCAGTCTCTCAACAGGCAAAGGCAGAAGCAACTTCTCAACGAGAACAGCAATTCGGGCATCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 72 bp CTCAGGCCCAACACACCACATAGCACAGAACCTGAATaGATTCCAATTCGCATGTCAACATCGTGCTTCGTT +
Preference number: 6 (lower is better)
Translates to: LRPNTPHSTEPE*IPIRMSTSCFV
Trigger: AACGAAGCACGATGTTGACATGCGAATTGGAATCCATTCAGGTTCTGTGCTATGTGGTGTGTTGGGCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp GAATCCTCCCAGGGATTCCTCCAGACTCAAGCTTGTTaGCTATGTCCACATCCCAAGACCAGACATCAAACT +
Preference number: 6 (lower is better)
Translates to: ESSQGFLQTQAC*LCPHPKTRHQT
Trigger: AGTTTGATGTCTGGTCTTGGGATGTGGACATAGCAAACAAGCTTGAGTCTGGAGGAATCCCTGGGAGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp ATTGAATTTCTTGTTAGGGCAGCCAGAGTATTCTGTTaGCCCACGATGTTGTCGAAAGGCAGCTCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: IEFLVRAARVFC*PTMLSKGSSGL
Trigger: GAGCCCAGAGCTGCCTTTCGACAACATCGTGGGCAAACAGAATACTCTGGCTGCCCTAACAAGAAATTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp TCGCCACTCCGCAAGTCGATGGTATGCTCTATTCTCTaGTTAATTTCCTCAGGCCCAGACTGGACATGCAAA +
Preference number: 6 (lower is better)
Translates to: SPLRKSMVCSIL*LISSGPDWTCK
Trigger: TTTGCATGTCCAGTCTGGGCCTGAGGAAATTAACAAGAGAATAGAGCATACCATCGACTTGCGGAGTGGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp ACATGGCTGGGTAAGATATTGCGCAGCATGTTCTCGTaGTGTTCCCTCAGTTCCTTCATCTCGTTGATCTCC +
Preference number: 6 (lower is better)
Translates to: TWLGKILRSMFS*CSLSSFISLIS
Trigger: GGAGATCAACGAGATGAAGGAACTGAGGGAACACAACGAGAACATGCTGCGCAATATCTTACCCAGCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp TACTTGTGCTCCAGGCTGGAGTCTTTAAACATCAGTGAGAATGGCTaGATATGCTCTCTTCTCAACTTATCGCCACTCCGCAAGTCGATG +
Preference number: 6 (lower is better)
Translates to: YLCSRLESLNISENG*ICSLLNLSPLRKSM
Trigger: CATCGACTTGCGGAGTGGCGATAAGTTGAGAAGAGAGCATATCAAGCCATTCTCACTGATGTTTAAAGACTCCAGCCTGGAGCACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp CTTCTCAACTTATCGCCACTCCGCAAGTCGATGGTATaGTCTATTCTCTTGTTAATTTCCTCAGGCCCAGAC +
Preference number: 6 (lower is better)
Translates to: LLNLSPLRKSMV*SILLLISSGPD
Trigger: GTCTGGGCCTGAGGAAATTAACAAGAGAATAGAGCATACCATCGACTTGCGGAGTGGCGATAAGTTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp TCCAGGCTGGAGTCTTTAAACATCAGTGAGAATGGCTaGATATGCTCTCTTCTCAACTTATCGCCACTCCGC +
Preference number: 6 (lower is better)
Translates to: SRLESLNISENG*ICSLLNLSPLR
Trigger: GCGGAGTGGCGATAAGTTGAGAAGAGAGCATATCAAGCCATTCTCACTGATGTTTAAAGACTCCAGCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp GCCACCACTGAGCCATGGCTGATGCCGATTCGGAGTTCAAAATTGTaGAATGAATGCTTGTTGATCTCTTGTATGCTTTCAGTCAGAGCA +
Preference number: 6 (lower is better)
Translates to: ATTEPWLMPIRSSKL*NECLLISCMLSVRA
Trigger: TGCTCTGACTGAAAGCATACAAGAGATCAACAAGCATTCATTCAACAATTTTGAACTCCGAATCGGCATCAGCCATGGCTCAGTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp GCAAAGCTTGTGCGAGATGGTTTGGAAGCAGATTTATTGAATTTCTaGTTAGGGCAGCCAGAGTATTCTGTTTGCCCACGATGTTGTCGA +
Preference number: 6 (lower is better)
Translates to: AKLVRDGLEADLLNF*LGQPEYSVCPRCCR
Trigger: TCGACAACATCGTGGGCAAACAGAATACTCTGGCTGCCCTAACAAGAAATTCAATAAATCTGCTTCCAAACCATCTCGCACAAGCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 72 bp GTACTCTGGGTAGGAGCAGATATCTGTAAACACAGCTaGGGAATTGAAAGTCAGGTTCTTCAAGGGTATCGA +
Preference number: 6 (lower is better)
Translates to: VLWVGADICKHS*GIESQVLQGYR
Trigger: TCGATACCCTTGAAGAACCTGACTTTCAATTCCTCAGCTGTGTTTACAGATATCTGCTCCTACCCAGAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023007.7
CDS GCA 72 bp ATTCTCTTGTTAATTTCCTCAGGCCCAGACTGGACATaGAAAGCTTGTGCGAGATGGTTTGGAAGCAGATTT +
Preference number: 6 (lower is better)
Translates to: ILLLISSGPDWT*KACARWFGSRF
Trigger: AAATCTGCTTCCAAACCATCTCGCACAAGCTTTGCATGTCCAGTCTGGGCCTGAGGAAATTAACAAGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CCA 72 bp TCAGGCCCAGACTGGACATGCAAAGCTTGTGCGAGATaGTTTGGAAGCAGATTTATTGAATTTCTTGTTAGG +
Preference number: 6 (lower is better)
Translates to: SGPDWTCKACAR*FGSRFIEFLVR
Trigger: CCTAACAAGAAATTCAATAAATCTGCTTCCAAACCATCTCGCACAAGCTTTGCATGTCCAGTCTGGGCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp AACACAGCTGAGGAATTGAAAGTCAGGTTCTTCAAGGGTATCGACTaGTCAAAATCACACCACAGAATATTTAGGACAGCTCCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: NTAEELKVRFFKGID*SKSHHRIFRTAPRK
Trigger: CTTCCTGGGAGCTGTCCTAAATATTCTGTGGTGTGATTTTGACAAGTCGATACCCTTGAAGAACCTGACTTTCAATTCCTCAGCTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023007.7
CDS CAA 90 bp TGGCTGATGCCGATTCGGAGTTCAAAATTGTTGAATGAATGCTTGTaGATCTCTTGTATGCTTTCAGTCAGAGCAAGAGAGAAGTCAGCC +
Preference number: 6 (lower is better)
Translates to: WLMPIRSSKLLNECL*ISCMLSVRAREKSA
Trigger: GGCTGACTTCTCTCTTGCTCTGACTGAAAGCATACAAGAGATCAACAAGCATTCATTCAACAATTTTGAACTCCGAATCGGCATCAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp GAACCTGAATGGATTCCAATTCGCATGTCAACATCGTaGTTCGTTCTGGATCTCACAAACCTGATAGTTTTG +
Preference number: 6 (lower is better)
Translates to: EPEWIPIRMSTS*FVLDLTNLIVL
Trigger: CAAAACTATCAGGTTTGTGAGATCCAGAACGAAGCACGATGTTGACATGCGAATTGGAATCCATTCAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 90 bp CCATGGCTGATGCCGATTCGGAGTTCAAAATTGTTGAATGAATGCTaGTTGATCTCTTGTATGCTTTCAGTCAGAGCAAGAGAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: PWLMPIRSSKLLNEC*LISCMLSVRAREKS
Trigger: TGACTTCTCTCTTGCTCTGACTGAAAGCATACAAGAGATCAACAAGCATTCATTCAACAATTTTGAACTCCGAATCGGCATCAGCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 72 bp ATACTTGTGCTCCAGGCTGGAGTCTTTAAACATCAGTaGGAATGGCTTGATATGCTCTCTTCTCAACTTATC +
Preference number: 6 (lower is better)
Translates to: ILVLQAGVFKHQ*EWLDMLSSQLI
Trigger: GATAAGTTGAGAAGAGAGCATATCAAGCCATTCTCACTGATGTTTAAAGACTCCAGCCTGGAGCACAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS GCA 72 bp CAAGGTCGTAGAGAGGTTGGTAAATCCTTTGACATCTaGAAAAAGAATACTGACGTTCTCATAGCGATGGAT +
Preference number: 6 (lower is better)
Translates to: QGRREVGKSFDI*KKNTDVLIAMD
Trigger: ATCCATCGCTATGAGAACGTCAGTATTCTTTTTGCAGATGTCAAAGGATTTACCAACCTCTCTACGACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp GAGCCATGGCTGATGCCGATTCGGAGTTCAAAATTGTaGAATGAATGCTTGTTGATCTCTTGTATGCTTTCA +
Preference number: 6 (lower is better)
Translates to: EPWLMPIRSSKL*NECLLISCMLS
Trigger: TGAAAGCATACAAGAGATCAACAAGCATTCATTCAACAATTTTGAACTCCGAATCGGCATCAGCCATGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS TCA 72 bp ATGGCTGATGCCGATTCGGAGTTCAAAATTGTTGAATaGATGCTTGTTGATCTCTTGTATGCTTTCAGTCAG +
Preference number: 6 (lower is better)
Translates to: MADADSEFKIVE*MLVDLLYAFSQ
Trigger: CTGACTGAAAGCATACAAGAGATCAACAAGCATTCATTCAACAATTTTGAACTCCGAATCGGCATCAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2
CDS CAA 72 bp GAGGAATTGAAAGTCAGGTTCTTCAAGGGTATCGACTaGTCAAAATCACACCACAGAATATTTAGGACAGCT +
Preference number: 6 (lower is better)
Translates to: EELKVRFFKGID*SKSHHRIFRTA
Trigger: AGCTGTCCTAAATATTCTGTGGTGTGATTTTGACAAGTCGATACCCTTGAAGAACCTGACTTTCAATTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023007.7
CDS TCA 72 bp GTCATAGGCATCAGCCTTGAAGAAGGAAGCAAACTTTaGATTGCAGTGATAAACAGAAGAACGATAAATGCA +
Preference number: 6 (lower is better)
Translates to: VIGISLEEGSKL*IAVINRRTINA
Trigger: TGCATTTATCGTTCTTCTGTTTATCACTGCAATTCAAAGTTTGCTTCCTTCTTCAAGGCTGATGCCTATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023007.7
ENSMUST00000228014.2