RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCY5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022840

Ensembl transcript IDs: ENSMUST00000114913.3

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCGTCTCTaGGACGAGTGGAAGAGCAGCGCTAGTGAGTGCAGGATGCTCAGA +
Preference number: 1 (lower is better)
Translates to: PVGPASVREGTVQRL*DEWKSSASECRMLR
Trigger: TCTGAGCATCCTGCACTCACTAGCGCTGCTCTTCCACTCGTCTCAGAGACGCTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 90 bp TGCCAAGGGGAAACATCTTTGGTCAGCTCGGTGCTTGCAGGACGCTaGCACCCTGGGCCTAGGCCAAAAGCCATGCCCACCAGCAAAGGC +
Preference number: 1 (lower is better)
Translates to: CQGETSLVSSVLAGR*HPGPRPKAMPTSKG
Trigger: GCCTTTGCTGGTGGGCATGGCTTTTGGCCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR TCA 90 bp CAGAAACCCACTGGTGTTGGCAGGACATGTGGAGGGCTGGGGACTTaGGAACGGTGCGAGAGAAGCAGCCCCCAAACAGAGGTGAGGGCA +
Preference number: 1 (lower is better)
Translates to: QKPTGVGRTCGGLGT*ERCERSSPQTEVRA
Trigger: TGCCCTCACCTCTGTTTGGGGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGCCAACACCAGTGGGTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 90 bp CCCTTACAGGGCATTGTCTCTGTGCGTGGAGGTGTGGGGAGAGGATaGCACAGGCCACACGTCTCCCAGTTCCTGTCCCCCAAACGTTGT +
Preference number: 1 (lower is better)
Translates to: PLQGIVSVRGGVGRG*HRPHVSQFLSPKRC
Trigger: ACAACGTTTGGGGGACAGGAACTGGGAGACGTGTGGCCTGTGCCATCCTCTCCCCACACCTCCACGCACAGAGACAATGCCCTGTAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 90 bp CGGTGCTTGCAGGACGCTGGCACCCTGGGCCTAGGCCAAAAGCCATaGCCACCAGCAAAGGCAGAAGTTGCTTCTGAGTCAAAGTGGGAA +
Preference number: 1 (lower is better)
Translates to: RCLQDAGTLGLGQKP*PPAKAEVASESKWE
Trigger: TTCCCACTTTGACTCAGAAGCAACTTCTGCCTTTGCTGGTGGGCATGGCTTTTGGCCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 90 bp CTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCAGCTCGGTaGTTGCAGGACGCTGGCACCCTGGGCCTAGGCCAAAAGCCATGC +
Preference number: 1 (lower is better)
Translates to: LAESSAKGKHLWSAR*LQDAGTLGLGQKPC
Trigger: GCATGGCTTTTGGCCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 90 bp TTCAACTCGAGTCTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTaGTCAGCTCGGTGCTTGCAGGACGCTGGCACCCTGGGCCTAGGC +
Preference number: 1 (lower is better)
Translates to: FNSSLAESSAKGKHL*SARCLQDAGTLGLG
Trigger: GCCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTCGAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 90 bp GAAGGAAGAGCTGGCACTGCACGCTGTCACCAGTCACTGCTGGAGTaGGGAGGAGCCTCCATGGGGAAACACAGTATAAACTCAGCACAC +
Preference number: 1 (lower is better)
Translates to: EGRAGTARCHQSLLE*GGASMGKHSINSAH
Trigger: GTGTGCTGAGTTTATACTGTGTTTCCCCATGGAGGCTCCTCCCCACTCCAGCAGTGACTGGTGACAGCGTGCAGTGCCAGCTCTTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 90 bp TGCCATGCTGCACCACCAATGAAGGCTCCGGTAGCACCTCCACCATaGGGCAGCAGCACTTGTCAGAAAACTCAAGGTTCAACTCGAGTC +
Preference number: 1 (lower is better)
Translates to: CHAAPPMKAPVAPPP*GSSTCQKTQGSTRV
Trigger: GACTCGAGTTGAACCTTGAGTTTTCTGACAAGTGCTGCTGCCGCATGGTGGAGGTGCTACCGGAGCCTTCATTGGTGGTGCAGCATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 90 bp TCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACCCAGGATaGATAGATTGCATCCCCAGGTCACAGGGACCCTTTCCAAGACAG +
Preference number: 1 (lower is better)
Translates to: SGGGRQGYTLSLNPG*IDCIPRSQGPFPRQ
Trigger: CTGTCTTGGAAAGGGTCCCTGTGACCTGGGGATGCAATCTATCCATCCTGGGTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 90 bp GCGCTAGTGAGTGCAGGATGCTCAGACCTCCTGGGACAGGAGCAGTaGCTTGGCCTTCTTGTCCTGTTGGCATTCACTTACTTGGGAAAT +
Preference number: 1 (lower is better)
Translates to: ALVSAGCSDLLGQEQ*LGLLVLLAFTYLGN
Trigger: ATTTCCCAAGTAAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGTCTGAGCATCCTGCACTCACTAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR TCA 90 bp CACCTCACTTTTACTCTCGTGCTAGAGGGGAGAATAACTGCACCCTaGGAAGCAATGAGGAGATCTGGGCAGACAGTAAGGGTGCTGTTC +
Preference number: 1 (lower is better)
Translates to: HLTFTLVLEGRITAP*EAMRRSGQTVRVLF
Trigger: GAACAGCACCCTTACTGTCTGCCCAGATCTCCTCATTGCTTCTCAGGGTGCAGTTATTCTCCCCTCTAGCACGAGAGTAAAAGTGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 90 bp CTTGTCAGAAAACTCAAGGTTCAACTCGAGTCTAGCAGAGTCTTCTaGCAAGGGGAAACATCTTTGGTCAGCTCGGTGCTTGCAGGACGC +
Preference number: 1 (lower is better)
Translates to: LVRKLKVQLESSRVF*QGETSLVSSVLAGR
Trigger: GCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTCGAGTTGAACCTTGAGTTTTCTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 90 bp TATTTTCTTTTGCTCAGAGCCACTGCTCCTTGCCTGGTGTCCTCTTaGCTCCCTTGTCAACAGTCCTGTTTCCCTTACAGGGCATTGTCT +
Preference number: 1 (lower is better)
Translates to: YFLLLRATAPCLVSS*LPCQQSCFPYRALS
Trigger: AGACAATGCCCTGTAAGGGAAACAGGACTGTTGACAAGGGAGGCAAGAGGACACCAGGCAAGGAGCAGTGGCTCTGAGCAAAAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR TCA 90 bp AAAACAACACACAACCCTGCTCTGGCTGTGCCTAGAAGTCTGAAATaGGGGGAACACACACGTACACCAGTACACACACACACACACACA +
Preference number: 1 (lower is better)
Translates to: KTTHNPALAVPRSLK*GEHTRTPVHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTACTGGTGTACGTGTGTGTTCCCCTCATTTCAGACTTCTAGGCACAGCCAGAGCAGGGTTGTGTGTTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 90 bp ATGGGGAAACACAGTATAAACTCAGCACACACACTGTACTCTGGTTaGAAGCTAAACAGAAACCCACTGGTGTTGGCAGGACATGTGGAG +
Preference number: 1 (lower is better)
Translates to: MGKHSINSAHTLYSG*KLNRNPLVLAGHVE
Trigger: CTCCACATGTCCTGCCAACACCAGTGGGTTTCTGTTTAGCTTCCAACCAGAGTACAGTGTGTGTGCTGAGTTTATACTGTGTTTCCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 90 bp CTCCATGGGGAAACACAGTATAAACTCAGCACACACACTGTACTCTaGTTGGAAGCTAAACAGAAACCCACTGGTGTTGGCAGGACATGT +
Preference number: 1 (lower is better)
Translates to: LHGETQYKLSTHTVL*LEAKQKPTGVGRTC
Trigger: ACATGTCCTGCCAACACCAGTGGGTTTCTGTTTAGCTTCCAACCAGAGTACAGTGTGTGTGCTGAGTTTATACTGTGTTTCCCCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR GCA 90 bp TGGGGAGAGGATGGCACAGGCCACACGTCTCCCAGTTCCTGTCCCCCAAACGTTGGTCAGCTCGGTGCTTaGAGGACGCTGGCACCCTGG +
Preference number: 2 (lower is better)
Translates to: WGEDGTGHTSPSSCPPNVGQLGA*RTLAPW
Trigger: CCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACC...AACGTTTGGGGGACAGGAACTGGGAGACGTGTGGCCTGTGCCATCCTCTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CCA 90 bp AGCCCCCAAACAGAGGTGAGGGCAGTGCAGAACTCGGGAAGCGGCAGAGCACAGCTGTGCGTGGAGGTGTaGGGAGAGGATGGCACAGGC +
Preference number: 2 (lower is better)
Translates to: SPQTEVRAVQNSGSGRAQLCVEV*GEDGTG
Trigger: GCCTGTGCCATCCTCTCCCCACACCTCCACGCACAG...CTGTGCTCTGCCGCTTCCCGAGTTCTGCACTGCCCTCACCTCTGTTTGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR GCA 90 bp AGCCCCCAAACAGAGGTGAGGGCAGTGCAGAACTCGGGAAGCGGCAGAGCACAGCTTTGGTCAGCTCGGTaGTTGCAGGACGCTGGCACC +
Preference number: 2 (lower is better)
Translates to: SPQTEVRAVQNSGSGRAQLWSAR*LQDAGT
Trigger: GGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAG...CTGTGCTCTGCCGCTTCCCGAGTTCTGCACTGCCCTCACCTCTGTTTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CCA 90 bp GCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCCCACCTGTGTCTGGGGGTaGAAGGCAGGGCTATACCCT +
Preference number: 2 (lower is better)
Translates to: AGHVEGWGLENGAREAAPTCVWG*KAGLYP
Trigger: AGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGT...GGGGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR GCA 90 bp GCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCCCTGCCTGGTGTCCTCTTaGCTCCCTTGTCAACAGTCC +
Preference number: 2 (lower is better)
Translates to: AGHVEGWGLENGAREAAPCLVSS*LPCQQS
Trigger: GGACTGTTGACAAGGGAGGCAAGAGGACACCAGGCA...GGGGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 90 bp GCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCAGCTCGGTGCTaGCAGGACGCTGGCACCCTGGGCCTAGGCCAAAAGCCATGCCCA +
Preference number: 2 (lower is better)
Translates to: AESSAKGKHLWSARC*QDAGTLGLGQKPCP
Trigger: TGGGCATGGCTTTTGGCCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 90 bp ACAGAAACCCACTGGTGTTGGCAGGACATGTGGAGGGCTGGGGACTaGAGAACGGTGCGAGAGAAGCAGCCCCCAAACAGAGGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: TETHWCWQDMWRAGD*RTVREKQPPNRGEG
Trigger: GCCCTCACCTCTGTTTGGGGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGCCAACACCAGTGGGTTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CCA 90 bp GAGCTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCGTAAGGGGAAACATCTTTaGTCAGCTCGGTGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: ELQEPVGPASVREGTVQRKGKHL*SARCLQ
Trigger: CTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTT...ACGCTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR GCA 90 bp GAGTGCACACACCCCTTAGAGGGAAGGAAGAGCTGGCACTGCACGCTGTCACCAGTAGCACCTCCACCATaGGGCAGCAGCACTTGTCAG +
Preference number: 2 (lower is better)
Translates to: ECTHPLEGRKSWHCTLSPVAPPP*GSSTCQ
Trigger: CTGACAAGTGCTGCTGCCGCATGGTGGAGGTGCTAC...TGGTGACAGCGTGCAGTGCCAGCTCTTCCTTCCCTCTAAGGGGTGTGTGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CCA 90 bp ACACACACACGTACAGTACAGAGGAGCAGAAGTGCACTGCTGGGCACAGCTGCTCCTACCACCCCATCATaGCCAAGGCCTCCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: THTRTVQRSRSALLGTAAPTTPS*PRPPLR
Trigger: CCTGAGGGGAGGCCTTGGCCATGATGGGGTGGTAGG...AGCAGCTGTGCCCAGCAGTGCACTTCTGCTCCTCTGTACTGTACGTGTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CCA 90 bp GCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCCCGTGACCTCTCCACAGTaGAAAAGCAGACCCTTGAGT +
Preference number: 2 (lower is better)
Translates to: AGHVEGWGLENGAREAAPVTSPQ*KSRPLS
Trigger: ACTCAAGGGTCTGCTTTTCCACTGTGGAGAGGTCAC...GGGGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 90 bp GTTCAACTCGAGTCTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTaGGTCAGCTCGGTGCTTGCAGGACGCTGGCACCCTGGGCCTAGG +
Preference number: 2 (lower is better)
Translates to: VQLESSRVFCQGETS*VSSVLAGRWHPGPR
Trigger: CCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTCGAGTTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR GCA 90 bp GAGTGCACACACCCCTTAGAGGGAAGGAAGAGCTGGCACTGCACGCTGTCACCAGAGCTGGCACCTGGCTaGCACCTCACTTTTACTCTC +
Preference number: 2 (lower is better)
Translates to: ECTHPLEGRKSWHCTLSPELAPG*HLTFTL
Trigger: GAGAGTAAAAGTGAGGTGGCAGCCAGGTGCCAGCTC...TGGTGACAGCGTGCAGTGCCAGCTCTTCCTTCCCTCTAAGGGGTGTGTGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR GCA 90 bp GAGTGCACACACCCCTTAGAGGGAAGGAAGAGCTGGCACTGCACGCTGTCACCACTAGGCCAAAAGCCATaGCCACCAGCAAAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: ECTHPLEGRKSWHCTLSPLGQKP*PPAKAE
Trigger: TTCTGCCTTTGCTGGTGGGCATGGCTTTTGGCCTAG...TGGTGACAGCGTGCAGTGCCAGCTCTTCCTTCCCTCTAAGGGGTGTGTGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CCA 90 bp ACCTCCTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTTGGCATTCACTTGCTGTTCCAATCCTCTaGAGGCCAGGATGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: TSWDRSSALAFLSCWHSLAVPIL*RPGCWH
Trigger: GTGCCAGCATCCTGGCCTCCAGAGGATTGGAACAGC...AAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR GCA 90 bp ATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACCCATTTGCTCAGAGCCACTaGTCCTTGCCTGGTGTCCTC +
Preference number: 2 (lower is better)
Translates to: ILPVSGGGRQGYTLSLNPFAQSH*SLPGVL
Trigger: GAGGACACCAGGCAAGGAGCAGTGGCTCTGAGCAAA...TGGGTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR GCA 90 bp ATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACCCAAGCACAGGCCCTATCTaGCCATGGTGCACAAAAGCT +
Preference number: 2 (lower is better)
Translates to: ILPVSGGGRQGYTLSLNPSTGPI*PWCTKA
Trigger: AGCTTTTGTGCACCATGGGCAGATAGGGCCTGTGCT...TGGGTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR GCA 90 bp TACTCTGGTTGGAAGCTAAACAGAAACCCACTGGTGTTGGCAGGACATGTGGAGGGAGCAGAAGTGCACTaGTGGGCACAGCTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: YSGWKLNRNPLVLAGHVEGAEVH*WAQLLP
Trigger: AGGAAGCAGCTGTGCCCAGCAGTGCACTTCTGCTCC...CTCCACATGTCCTGCCAACACCAGTGGGTTTCTGTTTAGCTTCCAACCAGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 90 bp ACCAATGAAGGCTCCGGTAGCACCTCCACCATGCGGCAGCAGCACTaGTCAGAAAACTCAAGGTTCAACTCGAGTCTAGCAGAGTCTTCT +
Preference number: 2 (lower is better)
Translates to: TNEGSGSTSTMRQQH*SENSRFNSSLAESS
Trigger: AGAAGACTCTGCTAGACTCGAGTTGAACCTTGAGTTTTCTGACAAGTGCTGCTGCCGCATGGTGGAGGTGCTACCGGAGCCTTCATTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 90 bp TCAGACCTCCTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTaGGCATTCACTTACTTGGGAAATGGGATGTGTGTAAGGTGGAGT +
Preference number: 2 (lower is better)
Translates to: SDLLGQEQCLGLLVL*AFTYLGNGMCVRWS
Trigger: ACTCCACCTTACACACATCCCATTTCCCAAGTAAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR GCA 90 bp TGTCAACAGTCCTGTTTCCCTTACAGGGCATTGTCTCTGTGCGTGGAGGTGTGGTCTAGCAGAGTCTTCTaGCAAGGGGAAACATCTTTG +
Preference number: 2 (lower is better)
Translates to: CQQSCFPYRALSLCVEVWSSRVF*QGETSL
Trigger: CAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGA...CCACACCTCCACGCACAGAGACAATGCCCTGTAAGGGAAACAGGACTGTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR TCA 90 bp GTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGGAGGCAGAAGTTGCTTCTaGGTCAAAGTGGGAATTTTA +
Preference number: 2 (lower is better)
Translates to: VLFKFICGREGHSSKVLGGRSCF*VKVGIL
Trigger: TAAAATTCCCACTTTGACTCAGAAGCAACTTCTGCC...TCCAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 90 bp TGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTaGGAAAGTACAAAAACTATTTTCTCCTCAGGGCATTTAAGTGTC +
Preference number: 2 (lower is better)
Translates to: CSSLSVVEKVIPQRF*ESTKTIFSSGHLSV
Trigger: GACACTTAAATGCCCTGAGGAGAAAATAGTTTTTGTACTTTCCAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp GCCAAGGCCTCCCCTCAGGCCAGCCACCATGTGCCATaGTGCACCACCAATGAAGGCTCCGGTAGCACCTCC +
Preference number: 3 (lower is better)
Translates to: AKASPQASHHVP*CTTNEGSGSTS
Trigger: GGAGGTGCTACCGGAGCCTTCATTGGTGGTGCAGCATGGCACATGGTGGCTGGCCTGAGGGGAGGCCTTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CAA 90 bp AGCCCCCAAACAGAGGTGAGGGCAGTGCAGAACTCGGGAAGCGGCAGAGCACAGTGGTCAGCTCGGTGCTaGCAGGACGCTGGCACCCTG +
Preference number: 3 (lower is better)
Translates to: SPQTEVRAVQNSGSGRAQWSARC*QDAGTL
Trigger: CAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCA...CTGTGCTCTGCCGCTTCCCGAGTTCTGCACTGCCCTCACCTCTGTTTGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp AAGGCCTCCCCTCAGGCCAGCCACCATGTGCCATGCTaGACCACCAATGAAGGCTCCGGTAGCACCTCCACC +
Preference number: 3 (lower is better)
Translates to: KASPQASHHVPC*TTNEGSGSTST
Trigger: GGTGGAGGTGCTACCGGAGCCTTCATTGGTGGTGCAGCATGGCACATGGTGGCTGGCCTGAGGGGAGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR TCA 72 bp GAGAACGGTGCGAGAGAAGCAGCCCCCAAACAGAGGTaGGGGCAGTGCAGAACTCGGGAAGCGGCAGAGCAC +
Preference number: 3 (lower is better)
Translates to: ENGAREAAPKQR*GQCRTREAAEH
Trigger: GTGCTCTGCCGCTTCCCGAGTTCTGCACTGCCCTCACCTCTGTTTGGGGGCTGCTTCTCTCGCACCGTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp TCATGGCCAAGGCCTCCCCTCAGGCCAGCCACCATGTaGCATGCTGCACCACCAATGAAGGCTCCGGTAGCA +
Preference number: 3 (lower is better)
Translates to: SWPRPPLRPATM*HAAPPMKAPVA
Trigger: TGCTACCGGAGCCTTCATTGGTGGTGCAGCATGGCACATGGTGGCTGGCCTGAGGGGAGGCCTTGGCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp GAGACGAGTGGAAGAGCAGCGCTAGTGAGTGCAGGATaGTCAGACCTCCTGGGACAGGAGCAGTGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: ETSGRAALVSAG*SDLLGQEQCLG
Trigger: GCCAAGGCACTGCTCCTGTCCCAGGAGGTCTGAGCATCCTGCACTCACTAGCGCTGCTCTTCCACTCGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp GAAACATCTTTGGTCAGCTCGGTGCTTGCAGGACGCTaGCACCCTGGGCCTAGGCCAAAAGCCATGCCCACC +
Preference number: 3 (lower is better)
Translates to: ETSLVSSVLAGR*HPGPRPKAMPT
Trigger: GGTGGGCATGGCTTTTGGCCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp AGAAACCCACTGGTGTTGGCAGGACATGTGGAGGGCTaGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCCC +
Preference number: 3 (lower is better)
Translates to: RNPLVLAGHVEG*GLENGAREAAP
Trigger: GGGGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGCCAACACCAGTGGGTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CAA 90 bp GCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCCCCAAGGGGAAACATCTTaGGTCAGCTCGGTGCTTGCA +
Preference number: 3 (lower is better)
Translates to: AGHVEGWGLENGAREAAPQGETS*VSSVLA
Trigger: TGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTG...GGGGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp CAGGACGCTGGCACCCTGGGCCTAGGCCAAAAGCCATaGCCACCAGCAAAGGCAGAAGTTGCTTCTGAGTCA +
Preference number: 3 (lower is better)
Translates to: QDAGTLGLGQKP*PPAKAEVASES
Trigger: TGACTCAGAAGCAACTTCTGCCTTTGCTGGTGGGCATGGCTTTTGGCCTAGGCCCAGGGTGCCAGCGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp TCTTCTGCCAAGGGGAAACATCTTTGGTCAGCTCGGTaGTTGCAGGACGCTGGCACCCTGGGCCTAGGCCAA +
Preference number: 3 (lower is better)
Translates to: SSAKGKHLWSAR*LQDAGTLGLGQ
Trigger: TTGGCCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CAA 90 bp GCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCCCCAGCAAAGGCAGAAGTaGCTTCTGAGTCAAAGTGGG +
Preference number: 3 (lower is better)
Translates to: AGHVEGWGLENGAREAAPQQRQK*LLSQSG
Trigger: CCCACTTTGACTCAGAAGCAACTTCTGCCTTTGCTG...GGGGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp GCTGGCACTGCACGCTGTCACCAGTCACTGCTGGAGTaGGGAGGAGCCTCCATGGGGAAACACAGTATAAAC +
Preference number: 3 (lower is better)
Translates to: AGTARCHQSLLE*GGASMGKHSIN
Trigger: GTTTATACTGTGTTTCCCCATGGAGGCTCCTCCCCACTCCAGCAGTGACTGGTGACAGCGTGCAGTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp AGTCTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTaGTCAGCTCGGTGCTTGCAGGACGCTGGCACCCTG +
Preference number: 3 (lower is better)
Translates to: SLAESSAKGKHL*SARCLQDAGTL
Trigger: CAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp TTGCTCAGAGCCACTGCTCCTTGCCTGGTGTCCTCTTaGCTCCCTTGTCAACAGTCCTGTTTCCCTTACAGG +
Preference number: 3 (lower is better)
Translates to: LLRATAPCLVSS*LPCQQSCFPYR
Trigger: CCTGTAAGGGAAACAGGACTGTTGACAAGGGAGGCAAGAGGACACCAGGCAAGGAGCAGTGGCTCTGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp AGTGCAGGATGCTCAGACCTCCTGGGACAGGAGCAGTaGCTTGGCCTTCTTGTCCTGTTGGCATTCACTTAC +
Preference number: 3 (lower is better)
Translates to: SAGCSDLLGQEQ*LGLLVLLAFTY
Trigger: GTAAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGTCTGAGCATCCTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp TTGGGGCTGGTGAAGGACATCAGGGTAACATTGAGCTaGCACCTGGCTGCCACCTCACTTTTACTCTCGTGC +
Preference number: 3 (lower is better)
Translates to: LGLVKDIRVTLS*HLAATSLLLSC
Trigger: GCACGAGAGTAAAAGTGAGGTGGCAGCCAGGTGCCAGCTCAATGTTACCCTGATGTCCTTCACCAGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp GGAAGGCAGGGCTATACCCTTTCCCTAAACCCAGGATaGATAGATTGCATCCCCAGGTCACAGGGACCCTTT +
Preference number: 3 (lower is better)
Translates to: GRQGYTLSLNPG*IDCIPRSQGPF
Trigger: AAAGGGTCCCTGTGACCTGGGGATGCAATCTATCCATCCTGGGTTTAGGGAAAGGGTATAGCCCTGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CAA 90 bp ATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACCCAGGCCTTCTTGTCCTGTaGGCATTCACTTACTTGGGA +
Preference number: 3 (lower is better)
Translates to: ILPVSGGGRQGYTLSLNPGLLVL*AFTYLG
Trigger: TCCCAAGTAAGTGAATGCCAACAGGACAAGAAGGCC...TGGGTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR TCA 72 bp CAACACACAACCCTGCTCTGGCTGTGCCTAGAAGTCTaGAATGAGGGGAACACACACGTACACCAGTACACA +
Preference number: 3 (lower is better)
Translates to: QHTTLLWLCLEV*NEGNTHVHQYT
Trigger: TGTGTACTGGTGTACGTGTGTGTTCCCCTCATTTCAGACTTCTAGGCACAGCCAGAGCAGGGTTGTGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp CCACCAGCAAAGGCAGAAGTTGCTTCTGAGTCAAAGTaGGAATTTTACCAGCACAGCTGTGAGCCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: PPAKAEVASESK*EFYQHSCEPGA
Trigger: TGCTCCAGGCTCACAGCTGTGCTGGTAAAATTCCCACTTTGACTCAGAAGCAACTTCTGCCTTTGCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR TCA 72 bp TTTACTCTCGTGCTAGAGGGGAGAATAACTGCACCCTaGGAAGCAATGAGGAGATCTGGGCAGACAGTAAGG +
Preference number: 3 (lower is better)
Translates to: FTLVLEGRITAP*EAMRRSGQTVR
Trigger: CCTTACTGTCTGCCCAGATCTCCTCATTGCTTCTCAGGGTGCAGTTATTCTCCCCTCTAGCACGAGAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CAA 90 bp AAAATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACATACAAAAAGACAAGTaGGGGTTCCCACCTCCCTTC +
Preference number: 3 (lower is better)
Translates to: KILPVSGGGRQGYTLSLNIQKDK*GFPPPF
Trigger: GAAGGGAGGTGGGAACCCCAACTTGTCTTTTTGTAT...GTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CAA 90 bp GTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGGAGACAGGAGCAGTGCCTaGGCCTTCTTGTCCTGTTGG +
Preference number: 3 (lower is better)
Translates to: VLFKFICGREGHSSKVLGDRSSA*AFLSCW
Trigger: CCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTC...TCCAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp AAACTCAAGGTTCAACTCGAGTCTAGCAGAGTCTTCTaGCAAGGGGAAACATCTTTGGTCAGCTCGGTGCTT +
Preference number: 3 (lower is better)
Translates to: KLKVQLESSRVF*QGETSLVSSVL
Trigger: AAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTCGAGTTGAACCTTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp ACACACACACACACGTACAGTACAGAGGAGCAGAAGTaGACTGCTGGGCACAGCTGCTTCCTAATAGAATTT +
Preference number: 3 (lower is better)
Translates to: THTHTYSTEEQK*TAGHSCFLIEF
Trigger: AAATTCTATTAGGAAGCAGCTGTGCCCAGCAGTGCACTTCTGCTCCTCTGTACTGTACGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp GCATTCACTTACTTGGGAAATGGGATGTGTGTAAGGTaGAGTTCGAAAGAGGGGCTAGTGTGGTACCCCAAA +
Preference number: 3 (lower is better)
Translates to: AFTYLGNGMCVR*SSKEGLVWYPK
Trigger: TTTGGGGTACCACACTAGCCCCTCTTTCGAACTCCACCTTACACACATCCCATTTCCCAAGTAAGTGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp AATAAATATTTTCTTTTGCTCAGAGCCACTGCTCCTTaGCTGGTGTCCTCTTGCCTCCCTTGTCAACAGTCC +
Preference number: 3 (lower is better)
Translates to: NKYFLLLRATAP*LVSSCLPCQQS
Trigger: GGACTGTTGACAAGGGAGGCAAGAGGACACCAGGCAAGGAGCAGTGGCTCTGAGCAAAAGAAAATATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR GCA 72 bp CACACACACGTACAGTACAGAGGAGCAGAAGTGCACTaGTGGGCACAGCTGCTTCCTAATAGAATTTACAAA +
Preference number: 3 (lower is better)
Translates to: HTHVQYRGAEVH*WAQLLPNRIYK
Trigger: TTTGTAAATTCTATTAGGAAGCAGCTGTGCCCAGCAGTGCACTTCTGCTCCTCTGTACTGTACGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp GAGAATAACTGCACCCTGAGAAGCAATGAGGAGATCTaGGCAGACAGTAAGGGTGCTGTTCAAGTTTATCTG +
Preference number: 3 (lower is better)
Translates to: ENNCTLRSNEEI*ADSKGAVQVYL
Trigger: CAGATAAACTTGAACAGCACCCTTACTGTCTGCCCAGATCTCCTCATTGCTTCTCAGGGTGCAGTTATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp CACAGTATAAACTCAGCACACACACTGTACTCTGGTTaGAAGCTAAACAGAAACCCACTGGTGTTGGCAGGA +
Preference number: 3 (lower is better)
Translates to: HSINSAHTLYSG*KLNRNPLVLAG
Trigger: TCCTGCCAACACCAGTGGGTTTCTGTTTAGCTTCCAACCAGAGTACAGTGTGTGTGCTGAGTTTATACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CCA 72 bp GAAACACAGTATAAACTCAGCACACACACTGTACTCTaGTTGGAAGCTAAACAGAAACCCACTGGTGTTGGC +
Preference number: 3 (lower is better)
Translates to: ETQYKLSTHTVL*LEAKQKPTGVG
Trigger: GCCAACACCAGTGGGTTTCTGTTTAGCTTCCAACCAGAGTACAGTGTGTGTGCTGAGTTTATACTGTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CAA 90 bp AAAATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACAATAAATATTTTCTTTaGCTCAGAGCCACTGCTCCT +
Preference number: 3 (lower is better)
Translates to: KILPVSGGGRQGYTLSLNNKYFL*LRATAP
Trigger: AGGAGCAGTGGCTCTGAGCAAAAGAAAATATTTATT...GTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR-3UTR CAA 90 bp GTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGGAAGTGGCATCCTCGTTTaGCTTGTGTGTCTTATAACA +
Preference number: 3 (lower is better)
Translates to: VLFKFICGREGHSSKVLGSGILV*LVCLIT
Trigger: TGTTATAAGACACACAAGCAAAACGAGGATGCCACT...TCCAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp GAGCTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCGTACACGGTCCACCAGATaGCCTCGGAGGCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: ELQEPVGPASVREGTVQRTRSTR*PRRRCV
Trigger: CACGCAGCGCCTCCGAGGGCATCTGGTGGACCGTGT...ACGCTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp ATTGAGCTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGTCGCCACCGCGCTCCTaGCAGGCGGACTTAGAGCGG +
Preference number: 4 (lower is better)
Translates to: IELQEPVGPASVREGTVQSPPRS*QADLER
Trigger: CCGCTCTAAGTCCGCCTGGCAGGAGCGCGGTGGCGA...CTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAGCTCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp CTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCGTCTCGGATGCGGCCCGCCTTaGCACCAGCTTCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: LQEPVGPASVREGTVQRLGCGPP*HQLPCG
Trigger: ACCACATGGAAGCTGGTGGCAAGGCGGGCCGCATCC...GAGACGCTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp TGGCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCCTGGCCAGGCGCTGCTaGTGTTGTGGGGTCACCGCT +
Preference number: 4 (lower is better)
Translates to: WQDMWRAGDLRTVREKQPLARRC*CCGVTA
Trigger: AGCGGTGACCCCACAACAGCAGCAGCGCCTGGCCAG...GGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp TGGCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCGGCGCTGCGTGGCTGTaGCAGCAACAGGCCCACTAC +
Preference number: 4 (lower is better)
Translates to: WQDMWRAGDLRTVREKQPGAAWL*QQQAHY
Trigger: GTAGTGGGCCTGTTGCTGCCACAGCCACGCAGCGCC...GGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp GTGAGTGCAGGATGCTCAGACCTCCTGGGACAGGAGCAGTGCCTTGGCCTTCTTCGGCTGGCCAGGCGCTaGTGCTGTTGTGGGGTCACC +
Preference number: 4 (lower is better)
Translates to: VSAGCSDLLGQEQCLGLLRLARR*CCCGVT
Trigger: GGTGACCCCACAACAGCAGCAGCGCCTGGCCAGCCG...AAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGTCTGAGCATCCTGCACTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp GCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCCCGCCACCTTGGTTGCATaGTCAGGGCACTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGHVEGWGLENGAREAAPATLVA*SGHWEV
Trigger: GACCTCCCAGTGCCCTGAGCATGCAACCAAGGTGGC...GGGGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GAGCTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCGTTGCTCCTGGCATCGATaGCCCGACCCAGAAACTCGT +
Preference number: 4 (lower is better)
Translates to: ELQEPVGPASVREGTVQRCSWHR*PDPETR
Trigger: ACGAGTTTCTGGGTCGGGCCATCGATGCCAGGAGCA...ACGCTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CTTGCCTACCACCCCATCATGGCCAAGGCCTCCCCTCAGGCCAGCCACCATGTGCTGGGAAGTTGCAGTTaGGCTGGGGGCTGCCACAGA +
Preference number: 4 (lower is better)
Translates to: LAYHPIMAKASPQASHHVLGSCS*AGGCHR
Trigger: TCTGTGGCAGCCCCCAGCCCAACTGCAACTTCCCAG...CACATGGTGGCTGGCCTGAGGGGAGGCCTTGGCCATGATGGGGTGGTAGGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp ATTGAGCTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCTGACGCCACAGAACTaGCTCCATCCTCCGACCCGT +
Preference number: 4 (lower is better)
Translates to: IELQEPVGPASVREGTVQLTPQN*LHPPTR
Trigger: ACGGGTCGGAGGATGGAGGCAGTTCTGTGGCGTCAG...CTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAGCTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp ATTGAGCTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCGCCCAGGCTGTAGTTaGAGGCCGACTCCATCACAT +
Preference number: 4 (lower is better)
Translates to: IELQEPVGPASVREGTVQRPGCS*RPTPSH
Trigger: ATGTGATGGAGTCGGCCTTCAACTACAGCCTGGGCG...CTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAGCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp CTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCGTCTCCCTTTGACACCTGGTTaGCGCCCAAGTGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LQEPVGPASVREGTVQRLPLTPG*RPSGCR
Trigger: TCTACAACCACTTGGGCGGCAACCAGGTGTCAAAGG...GAGACGCTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp ATTGAGCTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGAGTACTCTGGGAAGTTaGAGTTGGGCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IELQEPVGPASVREGTVQSTLGS*SWAGGC
Trigger: GCAGCCCCCAGCCCAACTGCAACTTCCCAGAGTACT...CTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAGCTCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp ATTGAGCTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCCAATGCAGCTGATCTaGAGGAACACGGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: IELQEPVGPASVREGTVQPMQLI*RNTEQA
Trigger: GGCCTGCTCCGTGTTCCTGCAGATCAGCTGCATTGG...CTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAGCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp TGGGGAGAGGATGGCACAGGCCACACGTCTCCCAGTTCCTGTCCCCCAAACGTTAGGCCCATGTGGTCCTaGTGGAACGCTGCACGGTTG +
Preference number: 4 (lower is better)
Translates to: WGEDGTGHTSPSSCPPNVRPMWS*WNAARL
Trigger: CAACCGTGCAGCGTTCCACCAGGACCACATGGGCCT...AACGTTTGGGGGACAGGAACTGGGAGACGTGTGGCCTGTGCCATCCTCTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp AGCCCCCAAACAGAGGTGAGGGCAGTGCAGAACTCGGGAAGCGGCAGAGCACAGCTGGGAGACCTCAGCTaGGTAGTGAGTGCACACACC +
Preference number: 4 (lower is better)
Translates to: SPQTEVRAVQNSGSGRAQLGDLS*VVSAHT
Trigger: GGTGTGTGCACTCACTACCCAGCTGAGGTCTCCCAG...CTGTGCTCTGCCGCTTCCCGAGTTCTGCACTGCCCTCACCTCTGTTTGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GAAACATCTTTGGTCAGCTCGGTGCTTGCAGGACGCTGGCACCCTGGGCCTAGGAAGTTGCAGTTGGGCTaGGGGCTGCCACAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ETSLVSSVLAGRWHPGPRKLQLG*GLPQKP
Trigger: GGGCTTCTGTGGCAGCCCCCAGCCCAACTGCAACTT...CCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp TGGCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCCCTTCAGCGCCACCTTaGTTGCATGCTCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: WQDMWRAGDLRTVREKQPPSAPP*LHAQGT
Trigger: AGTGCCCTGAGCATGCAACCAAGGTGGCGCTGAAGG...GGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp ATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACCCAGCCGGTCCCAGAGCCTaGCGCCACAGAACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: ILPVSGGGRQGYTLSLNPAGPRA*RHRTAS
Trigger: GGAGGCAGTTCTGTGGCGTCAGGCTCTGGGACCGGC...TGGGTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp TGGCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCGCTTTCCAATGCAGCTaGTCTGCAGGAACACGGAGC +
Preference number: 4 (lower is better)
Translates to: WQDMWRAGDLRTVREKQPAFQCS*SAGTRS
Trigger: GCTCCGTGTTCCTGCAGATCAGCTGCATTGGAAAGC...GGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp ATCATGGCCAAGGCCTCCCCTCAGGCCAGCCACCATGTGCCATGCTGCACCACCACTCAATGGCCAGCATaGGCACCAGCTTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: IMAKASPQASHHVPCCTTTQWPA*APAFQC
Trigger: GCATTGGAAAGCTGGTGCTCATGCTGGCCATTGAGT...GGTGGTGCAGCATGGCACATGGTGGCTGGCCTGAGGGGAGGCCTTGGCCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp AGCCCCCAAACAGAGGTGAGGGCAGTGCAGAACTCGGGAAGCGGCAGAGCACAGCTATGGCATTGGCGGTaGCCAGAAGGTCAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: SPQTEVRAVQNSGSGRAQLWHWR*PEGQRC
Trigger: ACAACGCTGACCTTCTGGTCACCGCCAATGCCATAG...CTGTGCTCTGCCGCTTCCCGAGTTCTGCACTGCCCTCACCTCTGTTTGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp TGTCAACAGTCCTGTTTCCCTTACAGGGCATTGTCTCTGTGCGTGGAGGTGTGGCTCGGAGGCGCTGCGTaGCTGTGGCAGCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: CQQSCFPYRALSLCVEVWLGGAA*LWQQQA
Trigger: GGCCTGTTGCTGCCACAGCCACGCAGCGCCTCCGAG...CCACACCTCCACGCACAGAGACAATGCCCTGTAAGGGAAACAGGACTGTTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp AGCCCCCAAACAGAGGTGAGGGCAGTGCAGAACTCGGGAAGCGGCAGAGCACAGGCGGATTGTGTCCGATaGAGTTGGTTCTCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: SPQTEVRAVQNSGSGRAQADCVR*SWFSGG
Trigger: ACCGCCAGAGAACCAACTCCATCGGACACAATCCGC...CTGTGCTCTGCCGCTTCCCGAGTTCTGCACTGCCCTCACCTCTGTTTGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCGTCTCGGGTGCTGTTCTTCTTaGATCGCACTATCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LQEPVGPASVREGTVQRLGCCSS*IALSSW
Trigger: CCAGGAAGATAGTGCGATCCAAGAAGAACAGCACCC...GAGACGCTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCGTCTCCGACGCCCTCATTGTTaGCCTCTAGCTCTACATAGA +
Preference number: 4 (lower is better)
Translates to: LQEPVGPASVREGTVQRLRRPHC*PLALHR
Trigger: TCTATGTAGAGCTAGAGGCCAACAATGAGGGCGTCG...GAGACGCTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 72 bp TCTGCCAAGGGGAAACATCTTTGGTCAGCTCGGTGCTaGCAGGACGCTGGCACCCTGGGCCTAGGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SAKGKHLWSARC*QDAGTLGLGQK
Trigger: CTTTTGGCCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp TGGAGCACAGGCCCTATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGCGTTGTCGAAGAGTGTaGCGCCGGGCACCTCCACGA +
Preference number: 4 (lower is better)
Translates to: WSTGPICPWCTKAVPILWRCRRV*RRAPPR
Trigger: TCGTGGAGGTGCCCGGCGTCACACTCTTCGACAACG...CCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATAGGGCCTGTGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp ATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACCCATGCCCTCGGAGGCGCTaGGTGGCTGTGGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: ILPVSGGGRQGYTLSLNPCPRRR*VAVAAT
Trigger: TGTTGCTGCCACAGCCACGCAGCGCCTCCGAGGGCA...TGGGTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp ATTGAGCTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCAGCTGGGTAGTGAGTaGACACACCCACAATGTTGG +
Preference number: 4 (lower is better)
Translates to: IELQEPVGPASVREGTVQQLGSE*THPQCW
Trigger: CCAACATTGTGGGTGTGTGCACTCACTACCCAGCTG...CTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAGCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp ATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACCCAGCGCTGCTGCTGTTGTaGGGTCACCGCTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: ILPVSGGGRQGYTLSLNPALLLL*GHRSPR
Trigger: TCTGGGGGAGCGGTGACCCCACAACAGCAGCAGCGC...TGGGTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp ACCTCCTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTTGGCATTCACTTCAGGCCAGGCCCATGTaGTCCTGGTGGAACGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSWDRSSALAFLSCWHSLQARPM*SWWNAA
Trigger: TGCAGCGTTCCACCAGGACCACATGGGCCTGGCCTG...AAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp TGGGGAGAGGATGGCACAGGCCACACGTCTCCCAGTTCCTGTCCCCCAAACGTTCCACCAGCTTCCATGTaGTTGGCCAGAGTGACATCG +
Preference number: 4 (lower is better)
Translates to: WGEDGTGHTSPSSCPPNVPPASM*LARVTS
Trigger: CGATGTCACTCTGGCCAACCACATGGAAGCTGGTGG...AACGTTTGGGGGACAGGAACTGGGAGACGTGTGGCCTGTGCCATCCTCTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CCATGCTGCACCACCAATGAAGGCTCCGGTAGCACCTCCACCATGCGGCAGCAGCCTCCTTCTCTTCTGTaGCCTGCAGTTTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PCCTTNEGSGSTSTMRQQPPSLL*PAVSRG
Trigger: TCCTCTGGAAACTGCAGGCCACAGAAGAGAAGGAGG...CTGCTGCCGCATGGTGGAGGTGCTACCGGAGCCTTCATTGGTGGTGCAGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GAGTGCACACACCCCTTAGAGGGAAGGAAGAGCTGGCACTGCACGCTGTCACCACCAGCTGGTATGTGTTaGCGGCCAGCACCTGGTACA +
Preference number: 4 (lower is better)
Translates to: ECTHPLEGRKSWHCTLSPPAGMC*RPAPGT
Trigger: TGTACCAGGTGCTGGCCGCCAACACATACCAGCTGG...TGGTGACAGCGTGCAGTGCCAGCTCTTCCTTCCCTCTAAGGGGTGTGTGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp TGTCAACAGTCCTGTTTCCCTTACAGGGCATTGTCTCTGTGCGTGGAGGTGTGGCCAGCACCACTGCAATaGGCGCATAGCAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CQQSCFPYRALSLCVEVWPAPLQ*AHSRPG
Trigger: GCCTGGCCTGCTATGCGCTCATTGCAGTGGTGCTGG...CCACACCTCCACGCACAGAGACAATGCCCTGTAAGGGAAACAGGACTGTTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp ACACACACACGTACAGTACAGAGGAGCAGAAGTGCACTGCTGGGCACAGCTGCTGACGGCCAGCACCACTaGAATGAGCGCATAGCAGGC +
Preference number: 4 (lower is better)
Translates to: THTRTVQRSRSALLGTAADGQHH*NERIAG
Trigger: GCCTGCTATGCGCTCATTGCAGTGGTGCTGGCCGTC...AGCAGCTGTGCCCAGCAGTGCACTTCTGCTCCTCTGTACTGTACGTGTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp TGGCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCGACCACACGTCGAATTaGCACTTTCTGAGACCAAGG +
Preference number: 4 (lower is better)
Translates to: WQDMWRAGDLRTVREKQPDHTSN*HFLRPR
Trigger: CCTTGGTCTCAGAAAGTGGCAATTCGACGTGTGGTC...GGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp TATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGAGGCCAGGATGCTGAGTTGGGCTGGGGGCTaGCACAGAAGCCCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: YLPMVHKSCSNPLEARMLSWAGG*HRSPAR
Trigger: ACGAGCAGGGCTTCTGTGGCAGCCCCCAGCCCAACT...CAGCATCCTGGCCTCCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp ACCTCCTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTTGGCATTCACTTCAGCGCCACCTTGGTTaGATGCTCAGGGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: TSWDRSSALAFLSCWHSLQRHLG*MLRALG
Trigger: TCCCAGTGCCCTGAGCATGCAACCAAGGTGGCGCTG...AAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CTTGCCTACCACCCCATCATGGCCAAGGCCTCCCCTCAGGCCAGCCACCATGTGTCATCTTGGCGATCATaGCCTTCTCTTCTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: LAYHPIMAKASPQASHHVSSWRS*PSLLSA
Trigger: AGCGGAAAGAAGAGAAGGCCATGATCGCCAAGATGA...CACATGGTGGCTGGCCTGAGGGGAGGCCTTGGCCATGATGGGGTGGTAGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp AGCCCCCAAACAGAGGTGAGGGCAGTGCAGAACTCGGGAAGCGGCAGAGCACAGGCAATAGCCTTGATGTaGGTCTTGCCTGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SPQTEVRAVQNSGSGRAQAIALM*VLPALS
Trigger: TGACAAGGCAGGCAAGACCCACATCAAGGCTATTGC...CTGTGCTCTGCCGCTTCCCGAGTTCTGCACTGCCCTCACCTCTGTTTGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CCATGCTGCACCACCAATGAAGGCTCCGGTAGCACCTCCACCATGCGGCAGCAGTTGGCGGCCAGCACCTaGTACATATCTGTAGTAACC +
Preference number: 4 (lower is better)
Translates to: PCCTTNEGSGSTSTMRQQLAAST*YISVVT
Trigger: GGTTACTACAGATATGTACCAGGTGCTGGCCGCCAA...CTGCTGCCGCATGGTGGAGGTGCTACCGGAGCCTTCATTGGTGGTGCAGCATGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp ATCATGGCCAAGGCCTCCCCTCAGGCCAGCCACCATGTGCCATGCTGCACCACCTGTAGATGGTATAGATaGAGAACACGGTCCACCAGA +
Preference number: 4 (lower is better)
Translates to: IMAKASPQASHHVPCCTTCRWYR*RTRSTR
Trigger: TCTGGTGGACCGTGTTCTTCATCTATACCATCTACA...GGTGGTGCAGCATGGCACATGGTGGCTGGCCTGAGGGGAGGCCTTGGCCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp ATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACCCAGCTTGCGAGCCCCAATaGCTCCAGCCACTACAGGTC +
Preference number: 4 (lower is better)
Translates to: ILPVSGGGRQGYTLSLNPACEPQ*LQPLQV
Trigger: GACCTGTAGTGGCTGGAGTCATTGGGGCTCGCAAGC...TGGGTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp TCTCGTGCTAGAGGGGAGAATAACTGCACCCTGAGAAGCAATGAGGAGATCTGGCGTGGGGGTAGCCATTaGCGCGGGAATCGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SRARGENNCTLRSNEEIWRGGSH*RGNRLL
Trigger: GAGAAGCCGATTCCCGCGCCAATGGCTACCCCCACG...CCAGATCTCCTCATTGCTTCTCAGGGTGCAGTTATTCTCCCCTCTAGCACGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GAAACATCTTTGGTCAGCTCGGTGCTTGCAGGACGCTGGCACCCTGGGCCTAGGTCTTCTTTCCGCTTCTaGGTACAGCTCAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ETSLVSSVLAGRWHPGPRSSFRF*VQLRMR
Trigger: CCTCATCCTGAGCTGTACCCAGAAGCGGAAAGAAGA...CCTAGGCCCAGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 72 bp GAGTCTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTaGGTCAGCTCGGTGCTTGCAGGACGCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: ESSRVFCQGETS*VSSVLAGRWHP
Trigger: AGGGTGCCAGCGTCCTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 72 bp CTCCCTTGTCAACAGTCCTGTTTCCCTTACAGGGCATaGTCTCTGTGCGTGGAGGTGTGGGGAGAGGATGGC +
Preference number: 4 (lower is better)
Translates to: LPCQQSCFPYRA*SLCVEVWGEDG
Trigger: GCCATCCTCTCCCCACACCTCCACGCACAGAGACAATGCCCTGTAAGGGAAACAGGACTGTTGACAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp CTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCAGCTCGGTGCTTGCAGCTAAGTCGGGCTCCCTaGAGGTCAGGAGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: LAESSAKGKHLWSARCLQLSRAP*RSGGTC
Trigger: GCAAGTTCCTCCTGACCTTCAGGGAGCCCGACTTAG...CTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp ATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACCCACATAGGTGGAGTCGTTaGGGCCAGAGGCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: ILPVSGGGRQGYTLSLNPHRWSR*GQRQPC
Trigger: ACATGGCTGCCTCTGGCCTCAACGACTCCACCTATG...TGGGTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp TGGAGCACAGGCCCTATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGTCCTGGGAGTTGGTGTaGAGAGAGATGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: WSTGPICPWCTKAVPILWSWELV*REMAKW
Trigger: CCACTTGGCCATCTCTCTGCACACCAACTCCCAGGA...CCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATAGGGCCTGTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp TGGGGAGAGGATGGCACAGGCCACACGTCTCCCAGTTCCTGTCCCCCAAACGTTTTCTCTTCTGTGGCCTaGAGTTTCCAGAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: WGEDGTGHTSPSSCPPNVFSSVA*SFQRKS
Trigger: TGACTTCCTCTGGAAACTGCAGGCCACAGAAGAGAA...AACGTTTGGGGGACAGGAACTGGGAGACGTGTGGCCTGTGCCATCCTCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CTCCACCATGCGGCAGCAGCACTTGTCAGAAAACTCAAGGTTCAACTCGAGTCTCCCATGTGGTCCTGGTaGAACGCTGCACGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LHHAAAALVRKLKVQLESPMWSW*NAARLQ
Trigger: CTGCAACCGTGCAGCGTTCCACCAGGACCACATGGG...AGACTCGAGTTGAACCTTGAGTTTTCTGACAAGTGCTGCTGCCGCATGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CTATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGAGGCCAGGATGCTTTCTCCCGCTGGGAATaGAGCCGAGCCTGGATACAC +
Preference number: 4 (lower is better)
Translates to: LSAHGAQKLFQSSGGQDAFSRWE*SRAWIH
Trigger: GTGTATCCAGGCTCGGCTCCATTCCCAGCGGGAGAA...AGCATCCTGGCCTCCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp TACTCTGGTTGGAAGCTAAACAGAAACCCACTGGTGTTGGCAGGACATGTGGAGTGCTGGTTCTCCCGCTaGGAATGGAGCCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YSGWKLNRNPLVLAGHVECWFSR*EWSRAW
Trigger: CCAGGCTCGGCTCCATTCCCAGCGGGAGAACCAGCA...CTCCACATGTCCTGCCAACACCAGTGGGTTTCTGTTTAGCTTCCAACCAGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GTGAGTGCAGGATGCTCAGACCTCCTGGGACAGGAGCAGTGCCTTGGCCTTCTTTCTGGCGGTTCATCTTaGCGATCATGGCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VSAGCSDLLGQEQCLGLLSGGSS*RSWPSL
Trigger: AAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGA...AAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGTCTGAGCATCCTGCACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp TGGAGCACAGGCCCTATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGGTGTCTGCAGGGGAGTaGGGAAAAGCTTCACACAGG +
Preference number: 4 (lower is better)
Translates to: WSTGPICPWCTKAVPILWVSAGE*GKASHR
Trigger: CCTGTGTGAAGCTTTTCCCCACTCCCCTGCAGACAC...CCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATAGGGCCTGTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GTGAGTGCAGGATGCTCAGACCTCCTGGGACAGGAGCAGTGCCTTGGCCTTCTTTGCTGTCCATACGGCTaGCCACATTCACTGTATTGC +
Preference number: 4 (lower is better)
Translates to: VSAGCSDLLGQEQCLGLLCCPYG*PHSLYC
Trigger: GCAATACAGTGAATGTGGCCAGCCGTATGGACAGCA...AAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGTCTGAGCATCCTGCACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp AAGGTTCAACTCGAGTCTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCCCCCGGCACTCCAGCTaGTATGTGTTGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KVQLESSRVFCQGETSLVPRHSS*YVLAAS
Trigger: GCTGGCCGCCAACACATACCAGCTGGAGTGCCGGGG...GACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTCGAGTTGAACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 72 bp CAGGATGCTCAGACCTCCTGGGACAGGAGCAGTGCCTaGGCCTTCTTGTCCTGTTGGCATTCACTTACTTGG +
Preference number: 4 (lower is better)
Translates to: QDAQTSWDRSSA*AFLSCWHSLTW
Trigger: CCAAGTAAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGTCTGAGCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp CTATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGAGGCCAGGATGCTCAATGCTGTGCTCCTTaGGGTAGGCATTGCGATCGC +
Preference number: 4 (lower is better)
Translates to: LSAHGAQKLFQSSGGQDAQCCAP*GRHCDR
Trigger: GCGATCGCAATGCCTACCTCAAGGAGCACAGCATTG...AGCATCCTGGCCTCCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp TATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGAGGCCAGGATGCTGGCAGCACGCTGTAGGTaGAGTACTCTGGGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: YLPMVHKSCSNPLEARMLAARCR*STLGSC
Trigger: GCAACTTCCCAGAGTACTTCACCTACAGCGTGCTGC...CAGCATCCTGGCCTCCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp ACACACACACGTACAGTACAGAGGAGCAGAAGTGCACTGCTGGGCACAGCTGCTAGGTCAGGAGGAACTTaGGGACGTGTTCAGATCGCA +
Preference number: 4 (lower is better)
Translates to: THTRTVQRSRSALLGTAARSGGT*GRVQIA
Trigger: TGCGATCTGAACACGTCCGCAAGTTCCTCCTGACCT...AGCAGCTGTGCCCAGCAGTGCACTTCTGCTCCTCTGTACTGTACGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp TCTCGTGCTAGAGGGGAGAATAACTGCACCCTGAGAAGCAATGAGGAGATCTGGGATGTTGTGCTCCTCTaGCAGGCAGCCCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: SRARGENNCTLRSNEEIWDVVLL*QAAHQV
Trigger: AACCTGGTGGGCTGCCTGGCAGAGGAGCACAACATC...CCAGATCTCCTCATTGCTTCTCAGGGTGCAGTTATTCTCCCCTCTAGCACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CCTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTTGGCATTCACTTACTTTGGTGTGCAGAGAGATaGCCAAGTGGAGAGCCGACA +
Preference number: 4 (lower is better)
Translates to: PGTGAVPWPSCPVGIHLLWCAER*PSGEPT
Trigger: TGTCGGCTCTCCACTTGGCCATCTCTCTGCACACCA...AAGTAAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CCTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTTGGCATTCACTTACTTCCCGGACCAACGAGATaGCCTCGATCATGTCCATTC +
Preference number: 4 (lower is better)
Translates to: PGTGAVPWPSCPVGIHLLPGPTR*PRSCPF
Trigger: GAATGGACATGATCGAGGCCATCTCGTTGGTCCGGG...AAGTAAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp CTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCAGCTCGGTGCTTGCAGGTCCACTTCATCCTCTaGGTTCGCACTTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LAESSAKGKHLWSARCLQVHFIL*VRTFLG
Trigger: GCCCAGGAAAGTGCGAACCCAGAGGATGAAGTGGAC...CTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp AAAATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACCGTGGAAAGCCAGCATaGCCAGGCACACAAGCACCA +
Preference number: 4 (lower is better)
Translates to: KILPVSGGGRQGYTLSLNRGKPA*PGTQAP
Trigger: TGGTGCTTGTGTGCCTGGTCATGCTGGCTTTCCACG...GTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp CTCCACCATGCGGCAGCAGCACTTGTCAGAAAACTCAAGGTTCAACTCGAGTCTTGTACTCTCCCGCTGTaGATTCCCACGCGCATGTTC +
Preference number: 4 (lower is better)
Translates to: LHHAAAALVRKLKVQLESCTLPL*IPTRMF
Trigger: GAACATGCGCGTGGGAATTCACAGCGGGAGAGTACA...AGACTCGAGTTGAACCTTGAGTTTTCTGACAAGTGCTGCTGCCGCATGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp GGGTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGGCACCGCAGCCCTCATaGGCACAGGCAGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GCCSSLSVVEKVIPQRFLAPQPS*AQAAGC
Trigger: ACACCCTGCTGCCTGTGCGCATGAGGGCTGCGGTGC...CAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGGACACCGCGCCAACGGCTaGCCAGGCGCTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VLFKFICGREGHSSKVLGHRANG*PGAAAV
Trigger: AACAGCAGCAGCGCCTGGCCAGCCGTTGGCGCGGTG...TCCAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp ACACACACACGTACAGTACAGAGGAGCAGAAGTGCACTGCTGGGCACAGCTGCTTGTTTCAGCAGAAACTaGTCCTGGGAGTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: THTRTVQRSRSALLGTAACFSRN*SWELVC
Trigger: GCACACCAACTCCCAGGACCAGTTTCTGCTGAAACA...AGCAGCTGTGCCCAGCAGTGCACTTCTGCTCCTCTGTACTGTACGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 72 bp TGTTTCTTGGGGCTGGTGAAGGACATCAGGGTAACATaGAGCTGGCACCTGGCTGCCACCTCACTTTTACTC +
Preference number: 4 (lower is better)
Translates to: CFLGLVKDIRVT*SWHLAATSLLL
Trigger: GAGTAAAAGTGAGGTGGCAGCCAGGTGCCAGCTCAATGTTACCCTGATGTCCTTCACCAGCCCCAAGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp GTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGGAACAGAAGCACCCCGCTaGGCACCGCAGCCCTCATGC +
Preference number: 4 (lower is better)
Translates to: VLFKFICGREGHSSKVLGTEAPR*APQPSC
Trigger: GCATGAGGGCTGCGGTGCTCAGCGGGGTGCTTCTGT...TCCAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp TGTCAACAGTCCTGTTTCCCTTACAGGGCATTGTCTCTGTGCGTGGAGGTGTGGTGGTGCAGGAGAAGATaGGGACATTGGAGACAAGCT +
Preference number: 4 (lower is better)
Translates to: CQQSCFPYRALSLCVEVWWCRRR*GHWRQA
Trigger: AGCTTGTCTCCAATGTCCTCATCTTCTCCTGCACCA...CCACACCTCCACGCACAGAGACAATGCCCTGTAAGGGAAACAGGACTGTTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp ACCTCCTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTTGGCATTCACTTTCTGGACAAAGCAGATaGAGAGGAAAACAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: TSWDRSSALAFLSCWHSLSGQSR*RGKQAR
Trigger: CCTCGCTTGTTTTCCTCTTCATCTGCTTTGTCCAGA...AAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp TCTCGTGCTAGAGGGGAGAATAACTGCACCCTGAGAAGCAATGAGGAGATCTGGGGTAGAAACTCAGCATaGACAGGGAGTGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: SRARGENNCTLRSNEEIWGRNSA*TGSGAQ
Trigger: TTGTGCCCCACTCCCTGTTCATGCTGAGTTTCTACC...CCAGATCTCCTCATTGCTTCTCAGGGTGCAGTTATTCTCCCCTCTAGCACGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp CTCCACCATGCGGCAGCAGCACTTGTCAGAAAACTCAAGGTTCAACTCGAGTCTGGGGAGGCCCTCCATTaGGGAAGTAAGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: LHHAAAALVRKLKVQLESGEALH*GSKSSS
Trigger: AGATGATGACTTACTTCCTCAATGGAGGGCCTCCCC...AGACTCGAGTTGAACCTTGAGTTTTCTGACAAGTGCTGCTGCCGCATGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GGGTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGCACTCCCGGGTCTCCTaGAAGGCCTGTCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GCCSSLSVVEKVIPQRFLHSRVS*KACLWE
Trigger: CTCCCAGAGACAGGCCTTCCAGGAGACCCGGGAGTG...CAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp AAGGTTCAACTCGAGTCTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCAGACGCTCCTGTTGCTaGTTCTCCCGCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: KVQLESSRVFCQGETSLVRRSCC*FSRWEW
Trigger: CCATTCCCAGCGGGAGAACCAGCAACAGGAGCGTCT...GACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTCGAGTTGAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp TACTCTGGTTGGAAGCTAAACAGAAACCCACTGGTGTTGGCAGGACATGTGGAGTTAGAGCGGAATATCTaGAGCAAGGCCAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: YSGWKLNRNPLVLAGHVELERNI*SKARQQ
Trigger: CTGCTGCCTGGCCTTGCTGCAGATATTCCGCTCTAA...CTCCACATGTCCTGCCAACACCAGTGGGTTTCTGTTTAGCTTCCAACCAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GGGTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGAACAGGCCCACTACCTaGACGGCCAGCACCACTGCA +
Preference number: 4 (lower is better)
Translates to: GCCSSLSVVEKVIPQRFLNRPTT*TASTTA
Trigger: TGCAGTGGTGCTGGCCGTCCAGGTAGTGGGCCTGTT...CAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp TCTCGTGCTAGAGGGGAGAATAACTGCACCCTGAGAAGCAATGAGGAGATCTGGTGTGTCCGATGGAGTTaGTTCTCTGGCGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: SRARGENNCTLRSNEEIWCVRWS*FSGGSS
Trigger: AGATGAACCGCCAGAGAACCAACTCCATCGGACACA...CCAGATCTCCTCATTGCTTCTCAGGGTGCAGTTATTCTCCCCTCTAGCACGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 72 bp GGGTTCCCACCTCCCTTCCCCAGTGGCATCCTCGTTTaGCTTGTGTGTCTTATAACACGCATACAACTAGCA +
Preference number: 4 (lower is better)
Translates to: GFPPPFPSGILV*LVCLITRIQLA
Trigger: TGCTAGTTGTATGCGTGTTATAAGACACACAAGCAAAACGAGGATGCCACTGGGGAAGGGAGGTGGGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 72 bp CTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTaGGCATTCACTTACTTGGGAAATGGGATGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LGQEQCLGLLVL*AFTYLGNGMCV
Trigger: TACACACATCCCATTTCCCAAGTAAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR TCA 90 bp AAGGTTCAACTCGAGTCTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCCCTCCTGCTTGGCGTTaGTGTCTGCTTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: KVQLESSRVFCQGETSLVPPAWR*CLLSSP
Trigger: TGGAGATGAAAGCAGACATCAACGCCAAGCAGGAGG...GACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTCGAGTTGAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp TATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGAGGCCAGGATGCTGGGTCATCCACCTGCTTaGAGTACTTCTTCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: YLPMVHKSCSNPLEARMLGHPPA*STSSLS
Trigger: ACTTAGAGAAGAAGTACTCCAAGCAGGTGGATGACC...CAGCATCCTGGCCTCCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp CTCCACCATGCGGCAGCAGCACTTGTCAGAAAACTCAAGGTTCAACTCGAGTCTAACATCATATCCTCCTaGTTGGCGTTGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LHHAAAALVRKLKVQLESNIISS*LALMSA
Trigger: AGCAGACATCAACGCCAAGCAGGAGGATATGATGTT...AGACTCGAGTTGAACCTTGAGTTTTCTGACAAGTGCTGCTGCCGCATGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp AAGGTTCAACTCGAGTCTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCCTGCTTTCATCTCCATaGCAACATGACGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KVQLESSRVFCQGETSLVLLSSP*QHDGEG
Trigger: TCCTTCCCCGTCATGTTGCCATGGAGATGAAAGCAG...GACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTCGAGTTGAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR GCA 90 bp GGGTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGGATGTGGGTCTTGCCTaGCTTGTCATAGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GCCSSLSVVEKVIPQRFLDVGLA*LVIGGV
Trigger: GACTCCACCTATGACAAGGCAGGCAAGACCCACATC...CAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GGGTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGAGCATGAACAGGGAGTaGGGCACAATGGTGATCTGG +
Preference number: 4 (lower is better)
Translates to: GCCSSLSVVEKVIPQRFLSMNRE*GTMVIW
Trigger: CCAGATCACCATTGTGCCCCACTCCCTGTTCATGCT...CAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CCA 90 bp GGGTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGATGGAGTTGGTTCTCTaGCGGTTCATCTTGGCGATC +
Preference number: 4 (lower is better)
Translates to: GCCSSLSVVEKVIPQRFLMELVL*RFILAI
Trigger: GATCGCCAAGATGAACCGCCAGAGAACCAACTCCAT...CAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
3UTR CAA 72 bp TGCCTTGGCCTTCTTGTCCTGTTGGCATTCACTTACTaGGGAAATGGGATGTGTGTAAGGTGGAGTTCGAAA +
Preference number: 4 (lower is better)
Translates to: CLGLLVLLAFTY*GNGMCVRWSSK
Trigger: TTTCGAACTCCACCTTACACACATCCCATTTCCCAAGTAAGTGAATGCCAACAGGACAAGAAGGCCAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 90 bp GACGCTCCTCCAGGCCCAGCTCCACCGAGCGGGGGCGCACCTCTGTaGCACCTGCGGCCGCTGCGGCCGCCGCCGAACTGCCGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: DAPPGPAPPSGGAPL*HLRPLRPPPNCRCR
Trigger: GCGGCAGCGGCAGTTCGGCGGCGGCCGCAGCGGCCGCAGGTGGCACAGAGGTGCGCCCCCGCTCGGTGGAGCTGGGCCTGGAGGAGCGTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 90 bp CGCTGCCGCCTGCTGCCGCGACCGCCGTCGTCGCCACCGCGCTCCTaGCAGGCGGACTTAGAGCGGAAGCTGAAGCCGAAGCCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: RCRLLPRPPSSPPRS*QADLERKLKPKPPA
Trigger: GGCTGGGGGCTTCGGCTTCAGCTTCCGCTCTAAGTCCGCCTGGCAGGAGCGCGGTGGCGACGACGGCGGTCGCGGCAGCAGGCGGCAGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS TCA 90 bp CAGGCAGCAGGCGCCCAACGACAGCACCGCGCCGGTCCCAGAGCCTaGCGCCACAGAACTGCCTCCATCCTCCGACCCGTCTCCATCCTC +
Preference number: 5 (lower is better)
Translates to: QAAGAQRQHRAGPRA*RHRTASILRPVSIL
Trigger: GAGGATGGAGACGGGTCGGAGGATGGAGGCAGTTCTGTGGCGTCAGGCTCTGGGACCGGCGCGGTGCTGTCGTTGGGCGCCTGCTGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 90 bp TCTTCGTCGTCATCGCCACCGCGCCAACGGCTGGCCAGGCGCTGCTaGTGTTGTGGGGTCACCGCTCCCCCAGATCTCTTGGTGGAGCCG +
Preference number: 5 (lower is better)
Translates to: SSSSSPPRQRLARRC*CCGVTAPPDLLVEP
Trigger: CGGCTCCACCAAGAGATCTGGGGGAGCGGTGACCCCACAACAGCAGCAGCGCCTGGCCAGCCGTTGGCGCGGTGGCGATGACGACGAAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 90 bp GGGTCTTCGTCGTCATCGCCACCGCGCCAACGGCTGGCCAGGCGCTaGTGCTGTTGTGGGGTCACCGCTCCCCCAGATCTCTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GSSSSSPPRQRLARR*CCCGVTAPPDLLVE
Trigger: CTCCACCAAGAGATCTGGGGGAGCGGTGACCCCACAACAGCAGCAGCGCCTGGCCAGCCGTTGGCGCGGTGGCGATGACGACGAAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 90 bp CGCTTAGTGGAGGGTCTTCGTCGTCATCGCCACCGCGCCAACGGCTaGCCAGGCGCTGCTGCTGTTGTGGGGTCACCGCTCCCCCAGATC +
Preference number: 5 (lower is better)
Translates to: RLVEGLRRHRHRANG*PGAAAVVGSPLPQI
Trigger: GATCTGGGGGAGCGGTGACCCCACAACAGCAGCAGCGCCTGGCCAGCCGTTGGCGCGGTGGCGATGACGACGAAGACCCTCCACTAAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS TCA 90 bp TGTGCAGAGAGATGGCCAAGTGGAGAGCCGACAGAAGCACCCCGCTaGGCACCGCAGCCCTCATGCGCACAGGCAGCAGGGTGTAGATGG +
Preference number: 5 (lower is better)
Translates to: CAERWPSGEPTEAPR*APQPSCAQAAGCRW
Trigger: CCATCTACACCCTGCTGCCTGTGCGCATGAGGGCTGCGGTGCTCAGCGGGGTGCTTCTGTCGGCTCTCCACTTGGCCATCTCTCTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 90 bp TGGCTGTGGCAGCAACAGGCCCACTACCTGGACGGCCAGCACCACTaGAATGAGCGCATAGCAGGCCAGGCCCATGTGGTCCTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: WLWQQQAHYLDGQHH*NERIAGQAHVVLVE
Trigger: TTCCACCAGGACCACATGGGCCTGGCCTGCTATGCGCTCATTGCAGTGGTGCTGGCCGTCCAGGTAGTGGGCCTGTTGCTGCCACAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp CTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCAGCTCGGTGCTTGCAGTGGTGGAGCCGCGGGTaGATCCCCCGGGGGCGTGGG +
Preference number: 5 (lower is better)
Translates to: LAESSAKGKHLWSARCLQWWSRG*IPRGRG
Trigger: CCCACGCCCCCGGGGGATCAACCCGCGGCTCCACCA...CTGCAAGCACCGAGCTGACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 90 bp AGACGCTCCAGTTTGTCCGACGGGAACTTCTTAGAGCGGAATATCTaGAGCAAGGCCAGGCAGCAGGCGCCCAACGACAGCACCGCGCCG +
Preference number: 5 (lower is better)
Translates to: RRSSLSDGNFLERNI*SKARQQAPNDSTAP
Trigger: CGGCGCGGTGCTGTCGTTGGGCGCCTGCTGCCTGGCCTTGCTGCAGATATTCCGCTCTAAGAAGTTCCCGTCGGACAAACTGGAGCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp GCAGGACATGTGGAGGGCTGGGGACTTGAGAACGGTGCGAGAGAAGCAGCCCCCAACTGGTCCTGGGAGTaGGTGTGCAGAGAGATGGCC +
Preference number: 5 (lower is better)
Translates to: AGHVEGWGLENGAREAAPNWSWE*VCREMA
Trigger: GGCCATCTCTCTGCACACCAACTCCCAGGACCAGTT...GGGGGCTGCTTCTCTCGCACCGTTCTCAAGTCCCCAGCCCTCCACATGTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 90 bp AATGAGCGCATAGCAGGCCAGGCCCATGTGGTCCTGGTGGAACGCTaGACGGTTGCAGAGCACGGCCATGATAAGGATCACGCCCACAGC +
Preference number: 5 (lower is better)
Translates to: NERIAGQAHVVLVER*TVAEHGHDKDHAHS
Trigger: GCTGTGGGCGTGATCCTTATCATGGCCGTGCTCTGCAACCGTGCAGCGTTCCACCAGGACCACATGGGCCTGGCCTGCTATGCGCTCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 90 bp AGCAGAAACTGGTCCTGGGAGTTGGTGTGCAGAGAGATGGCCAAGTaGAGAGCCGACAGAAGCACCCCGCTGAGCACCGCAGCCCTCATG +
Preference number: 5 (lower is better)
Translates to: SRNWSWELVCREMAK*RADRSTPLSTAALM
Trigger: CATGAGGGCTGCGGTGCTCAGCGGGGTGCTTCTGTCGGCTCTCCACTTGGCCATCTCTCTGCACACCAACTCCCAGGACCAGTTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp TATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGAGGCCAGGATGCTGCAGGCGCTGCTGCTGTaGTGGGGTCACCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: YLPMVHKSCSNPLEARMLQALLL*WGHRSP
Trigger: GGGGGAGCGGTGACCCCACAACAGCAGCAGCGCCTG...CAGCATCCTGGCCTCCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp ATCATGGCCAAGGCCTCCCCTCAGGCCAGCCACCATGTGCCATGCTGCACCACCAAGGTCAGGAGGAACTaGCGGACGTGTTCAGATCGC +
Preference number: 5 (lower is better)
Translates to: IMAKASPQASHHVPCCTTKVRRN*RTCSDR
Trigger: GCGATCTGAACACGTCCGCAAGTTCCTCCTGACCTT...GGTGGTGCAGCATGGCACATGGTGGCTGGCCTGAGGGGAGGCCTTGGCCATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp ATCATGGCCAAGGCCTCCCCTCAGGCCAGCCACCATGTGCCATGCTGCACCACCCACTGGGAGGTCCCGTaGTTGCTGAAGTCTATGGCA +
Preference number: 5 (lower is better)
Translates to: IMAKASPQASHHVPCCTTHWEVP*LLKSMA
Trigger: TGCCATAGACTTCAGCAACAACGGGACCTCCCAGTG...GGTGGTGCAGCATGGCACATGGTGGCTGGCCTGAGGGGAGGCCTTGGCCATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp GAGCTCCAGGAACCTGTAGGACCGGCCTCTGTGAGGGAGGGGACCGTGCAGCGTAAGTCTGCAATAGCCTaGATGTGGGTCTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: ELQEPVGPASVREGTVQRKSAIA*MWVLPA
Trigger: GGCAGGCAAGACCCACATCAAGGCTATTGCAGACTT...ACGCTGCACGGTCCCCTCCCTCACAGAGGCCGGTCCTACAGGTTCCTGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp ATCATGGCCAAGGCCTCCCCTCAGGCCAGCCACCATGTGCCATGCTGCACCACCCACACACCCACAATGTaGGTGCAGGAGAAGATGAGG +
Preference number: 5 (lower is better)
Translates to: IMAKASPQASHHVPCCTTHTPTM*VQEKMR
Trigger: CCTCATCTTCTCCTGCACCAACATTGTGGGTGTGTG...GGTGGTGCAGCATGGCACATGGTGGCTGGCCTGAGGGGAGGCCTTGGCCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp GAGTGCACACACCCCTTAGAGGGAAGGAAGAGCTGGCACTGCACGCTGTCACCATCCAGCTGGTATGTGTaGGCGGCCAGCACCTGGTAC +
Preference number: 5 (lower is better)
Translates to: ECTHPLEGRKSWHCTLSPSSWYV*AASTWY
Trigger: GTACCAGGTGCTGGCCGCCAACACATACCAGCTGGA...TGGTGACAGCGTGCAGTGCCAGCTCTTCCTTCCCTCTAAGGGGTGTGTGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 90 bp AGGGGCGCTCGGCTCCCCAGTGAGGCGGATTGTGTCCGATGGAGTTaGTTCTCTGGCGGTTCATCTTGGCGATCATGGCCTTCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: RGARLPSEADCVRWS*FSGGSSWRSWPSLL
Trigger: AAGAAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAGAACCAACTCCATCGGACACAATCCGCCTCACTGGGGAGCCGAGCGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 90 bp TGTAGAAGGGGCGCTCGGCTCCCCAGTGAGGCGGATTGTGTCCGATaGAGTTGGTTCTCTGGCGGTTCATCTTGGCGATCATGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: CRRGARLPSEADCVR*SWFSGGSSWRSWPS
Trigger: AGAAGGCCATGATCGCCAAGATGAACCGCCAGAGAACCAACTCCATCGGACACAATCCGCCTCACTGGGGAGCCGAGCGCCCCTTCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 90 bp TGCGGACGTGTTCAGATCGCAGTCTGTCGATGCTCCTGGCATCGATaGCCCGACCCAGAAACTCGTCCACTTCATCCTCTGGGTTCGCAC +
Preference number: 5 (lower is better)
Translates to: CGRVQIAVCRCSWHR*PDPETRPLHPLGSH
Trigger: GTGCGAACCCAGAGGATGAAGTGGACGAGTTTCTGGGTCGGGCCATCGATGCCAGGAGCATCGACAGACTGCGATCTGAACACGTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp AAAGAGTGCACACACCCCTTAGAGGGAAGGAAGAGCTGGCACTGCACGCTGTCACAGGAGACGCTCCTGTaGCTGGTTCTCCCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: KECTHPLEGRKSWHCTLSQETLL*LVLPLG
Trigger: TCCCAGCGGGAGAACCAGCAACAGGAGCGTCTCCTG...TGACAGCGTGCAGTGCCAGCTCTTCCTTCCCTCTAAGGGGTGTGTGCACTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 90 bp CTCGTCGCCCAGGCTGTAGTTGAAGGCCGACTCCATCACATGACATaGGTTGACCTGGTTCACCGTGATGTTGTGCTCCTCTGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LVAQAVVEGRLHHMT*VDLVHRDVVLLCQA
Trigger: TGCCTGGCAGAGGAGCACAACATCACGGTGAACCAGGTCAACGCATGTCATGTGATGGAGTCGGCCTTCAACTACAGCCTGGGCGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 90 bp TTGGAGACAAGCTGTTTCAGCAGAAACTGGTCCTGGGAGTTGGTGTaGAGAGAGATGGCCAAGTGGAGAGCCGACAGAAGCACCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LETSCFSRNWSWELV*REMAKWRADRSTPL
Trigger: CAGCGGGGTGCTTCTGTCGGCTCTCCACTTGGCCATCTCTCTGCACACCAACTCCCAGGACCAGTTTCTGCTGAAACAGCTTGTCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp CCATGCTGCACCACCAATGAAGGCTCCGGTAGCACCTCCACCATGCGGCAGCAGGAGAAGATGAGGACATaGGAGACAAGCTGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: PCCTTNEGSGSTSTMRQQEKMRT*ETSCFS
Trigger: GCTGAAACAGCTTGTCTCCAATGTCCTCATCTTCTC...CTGCTGCCGCATGGTGGAGGTGCTACCGGAGCCTTCATTGGTGGTGCAGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp ACACACACACGTACAGTACAGAGGAGCAGAAGTGCACTGCTGGGCACAGCTGCTAAGTACTCTGGGAAGTaGCAGTTGGGCTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: THTRTVQRSRSALLGTAAKYSGK*QLGWGL
Trigger: CAGCCCCCAGCCCAACTGCAACTTCCCAGAGTACTT...AGCAGCTGTGCCCAGCAGTGCACTTCTGCTCCTCTGTACTGTACGTGTGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp TGTCAACAGTCCTGTTTCCCTTACAGGGCATTGTCTCTGTGCGTGGAGGTGTGGACCTTCAGCGCCACCTaGGTTGCATGCTCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: CQQSCFPYRALSLCVEVWTFSAT*VACSGH
Trigger: GTGCCCTGAGCATGCAACCAAGGTGGCGCTGAAGGT...CCACACCTCCACGCACAGAGACAATGCCCTGTAAGGGAAACAGGACTGTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 90 bp GGACATTGGAGACAAGCTGTTTCAGCAGAAACTGGTCCTGGGAGTTaGTGTGCAGAGAGATGGCCAAGTGGAGAGCCGACAGAAGCACCC +
Preference number: 5 (lower is better)
Translates to: GHWRQAVSAETGPGS*CAERWPSGEPTEAP
Trigger: GGGTGCTTCTGTCGGCTCTCCACTTGGCCATCTCTCTGCACACCAACTCCCAGGACCAGTTTCTGCTGAAACAGCTTGTCTCCAATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS TCA 90 bp GGTCATCCACCTGCTTGGAGTACTTCTTCTCTAAGTCGGGCTCCCTaGAGGTCAGGAGGAACTTGCGGACGTGTTCAGATCGCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: GHPPAWSTSSLSRAP*RSGGTCGRVQIAVC
Trigger: ACAGACTGCGATCTGAACACGTCCGCAAGTTCCTCCTGACCTTCAGGGAGCCCGACTTAGAGAAGAAGTACTCCAAGCAGGTGGATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 90 bp GAGGCGGATTGTGTCCGATGGAGTTGGTTCTCTGGCGGTTCATCTTaGCGATCATGGCCTTCTCTTCTTTCCGCTTCTGGGTACAGCTCA +
Preference number: 5 (lower is better)
Translates to: EADCVRWSWFSGGSS*RSWPSLLSASGYSS
Trigger: TGAGCTGTACCCAGAAGCGGAAAGAAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAGAACCAACTCCATCGGACACAATCCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 90 bp CGACCCAGAAACTCGTCCACTTCATCCTCTGGGTTCGCACTTTCCTaGGCATTCTTGTCCTTGGGGTCCTCAAAGCCCATCCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: RPRNSSTSSSGFALS*AFLSLGSSKPILFI
Trigger: GATGAAGAGGATGGGCTTTGAGGACCCCAAGGACAAGAATGCCCAGGAAAGTGCGAACCCAGAGGATGAAGTGGACGAGTTTCTGGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp TATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGAGGCCAGGATGCTGCTCTGGCGGTTCATCTaGGCGATCATGGCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: YLPMVHKSCSNPLEARMLLWRFI*AIMAFS
Trigger: AGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAG...CAGCATCCTGGCCTCCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp ACCTCCTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTTGGCATTCACTTCTTTCCTGGGCATTCTaGTCCTTGGGGTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: TSWDRSSALAFLSCWHSLLSWAF*SLGSSK
Trigger: CTTTGAGGACCCCAAGGACAAGAATGCCCAGGAAAG...AAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp ACCTCCTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTTGGCATTCACTTTGGGAGGTCCCGTTGTaGCTGAAGTCTATGGCATTG +
Preference number: 5 (lower is better)
Translates to: TSWDRSSALAFLSCWHSLWEVPL*LKSMAL
Trigger: CAATGCCATAGACTTCAGCAACAACGGGACCTCCCA...AAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 90 bp CAGGAGAAGATGAGGACATTGGAGACAAGCTGTTTCAGCAGAAACTaGTCCTGGGAGTTGGTGTGCAGAGAGATGGCCAAGTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: QEKMRTLETSCFSRN*SWELVCREMAKWRA
Trigger: GGCTCTCCACTTGGCCATCTCTCTGCACACCAACTCCCAGGACCAGTTTCTGCTGAAACAGCTTGTCTCCAATGTCCTCATCTTCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS TCA 90 bp CTGGGTAGTGAGTGCACACACCCACAATGTTGGTGCAGGAGAAGATaGGGACATTGGAGACAAGCTGTTTCAGCAGAAACTGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LGSECTHPQCWCRRR*GHWRQAVSAETGPG
Trigger: CCCAGGACCAGTTTCTGCTGAAACAGCTTGTCTCCAATGTCCTCATCTTCTCCTGCACCAACATTGTGGGTGTGTGCACTCACTACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 90 bp CACATGACATGCGTTGACCTGGTTCACCGTGATGTTGTGCTCCTCTaGCAGGCAGCCCACCAGGTTCTTAGAGTTGCACATGAACATGTT +
Preference number: 5 (lower is better)
Translates to: HMTCVDLVHRDVVLL*QAAHQVLRVAHEHV
Trigger: AACATGTTCATGTGCAACTCTAAGAACCTGGTGGGCTGCCTGGCAGAGGAGCACAACATCACGGTGAACCAGGTCAACGCATGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 90 bp AAGATGAGGACATTGGAGACAAGCTGTTTCAGCAGAAACTGGTCCTaGGAGTTGGTGTGCAGAGAGATGGCCAAGTGGAGAGCCGACAGA +
Preference number: 5 (lower is better)
Translates to: KMRTLETSCFSRNWS*ELVCREMAKWRADR
Trigger: TCTGTCGGCTCTCCACTTGGCCATCTCTCTGCACACCAACTCCCAGGACCAGTTTCTGCTGAAACAGCTTGTCTCCAATGTCCTCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp CTATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGAGGCCAGGATGCTTACAGACGCTCCAGTTaGTCCGACGGGAACTTCTTA +
Preference number: 5 (lower is better)
Translates to: LSAHGAQKLFQSSGGQDAYRRSS*SDGNFL
Trigger: TAAGAAGTTCCCGTCGGACAAACTGGAGCGTCTGTA...AGCATCCTGGCCTCCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp CTATCTGCCCATGGTGCACAAAAGCTGTTCCAATCCTCTGGAGGCCAGGATGCTAGACCACACGTCGAATaGCCACTTTCTGAGACCAAG +
Preference number: 5 (lower is better)
Translates to: LSAHGAQKLFQSSGGQDARPHVE*PLSETK
Trigger: CTTGGTCTCAGAAAGTGGCAATTCGACGTGTGGTCT...AGCATCCTGGCCTCCAGAGGATTGGAACAGCTTTTGTGCACCATGGGCAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp GGGTGCTGTTCAAGTTTATCTGTGGTAGAGAAGGTCATTCCTCAAAGGTTCTTGTCAGCGCCACCTTGGTaGCATGCTCAGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: GCCSSLSVVEKVIPQRFLSAPPW*HAQGTG
Trigger: CCCAGTGCCCTGAGCATGCAACCAAGGTGGCGCTGA...CAAGAACCTTTGAGGAATGACCTTCTCTACCACAGATAAACTTGAACAGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp TCTCGTGCTAGAGGGGAGAATAACTGCACCCTGAGAAGCAATGAGGAGATCTGGGTGCTGCCTATGGTCTaGATCTTTTCCAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SRARGENNCTLRSNEEIWVLPMV*IFSSCL
Trigger: CAGGCAGCTGGAAAAGATCAAGACCATAGGCAGCAC...CCAGATCTCCTCATTGCTTCTCAGGGTGCAGTTATTCTCCCCTCTAGCACGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp CCTGGGACAGGAGCAGTGCCTTGGCCTTCTTGTCCTGTTGGCATTCACTTACTTATCATATCCTCCTGCTaGGCGTTGATGTCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: PGTGAVPWPSCPVGIHLLIISSC*ALMSAF
Trigger: GAAAGCAGACATCAACGCCAAGCAGGAGGATATGAT...AAGTAAGTGAATGCCAACAGGACAAGAAGGCCAAGGCACTGCTCCTGTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp AAAATCTTACCTGTGTCTGGGGGTGGAAGGCAGGGCTATACCCTTTCCCTAAACTTGTGTCCGATGGAGTaGGTTCTCTGGCGGTTCATC +
Preference number: 5 (lower is better)
Translates to: KILPVSGGGRQGYTLSLNLCPME*VLWRFI
Trigger: GATGAACCGCCAGAGAACCAACTCCATCGGACACAA...GTTTAGGGAAAGGGTATAGCCCTGCCTTCCACCCCCAGACACAGGTAAGATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp AAGGTTCAACTCGAGTCTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCTCCTCTTCATCTCCTTaGACACCTGGTTGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: KVQLESSRVFCQGETSLVSSSSP*TPGCRP
Trigger: TGGGCGGCAACCAGGTGTCAAAGGAGATGAAGAGGA...GACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTCGAGTTGAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp AAGGTTCAACTCGAGTCTAGCAGAGTCTTCTGCCAAGGGGAAACATCTTTGGTCAGGGTGCTGTTCTTCTaGGATCGCACTATCTTCCTG +
Preference number: 5 (lower is better)
Translates to: KVQLESSRVFCQGETSLVRVLFF*DRTIFL
Trigger: CAGGAAGATAGTGCGATCCAAGAAGAACAGCACCCT...GACCAAAGATGTTTCCCCTTGGCAGAAGACTCTGCTAGACTCGAGTTGAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp CTCCACCATGCGGCAGCAGCACTTGTCAGAAAACTCAAGGTTCAACTCGAGTCTTTGCACATGAACATGTaGACAAAAGCCGAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: LHHAAAALVRKLKVQLESLHMNM*TKAERN
Trigger: GTTCCTCTCGGCTTTTGTCAACATGTTCATGTGCAA...AGACTCGAGTTGAACCTTGAGTTTTCTGACAAGTGCTGCTGCCGCATGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS-3UTR CAA 90 bp TCTCGTGCTAGAGGGGAGAATAACTGCACCCTGAGAAGCAATGAGGAGATCTGGATTGATGTACTTCATTaGGTCCATCAGCTTCATAGC +
Preference number: 5 (lower is better)
Translates to: SRARGENNCTLRSNEEIWIDVLH*VHQLHS
Trigger: GCTATGAAGCTGATGGACCAAATGAAGTACATCAAT...CCAGATCTCCTCATTGCTTCTCAGGGTGCAGTTATTCTCCCCTCTAGCACGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp CCAAGCGGCGCGATGCTCCGGGCCTCCCCGGGGCGCTaGCGACGCCGCTGTCTGTGCAGCGTAGCCCGGGGG +
Preference number: 6 (lower is better)
Translates to: PSGAMLRASPGR*RRRCLCSVARG
Trigger: CCCCCGGGCTACGCTGCACAGACAGCGGCGTCGCCAGCGCCCCGGGGAGGCCCGGAGCATCGCGCCGCTTGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS TCA 72 bp GGCGCCCAACGACAGCACCGCGCCGGTCCCAGAGCCTaGCGCCACAGAACTGCCTCCATCCTCCGACCCGTC +
Preference number: 6 (lower is better)
Translates to: GAQRQHRAGPRA*RHRTASILRPV
Trigger: GACGGGTCGGAGGATGGAGGCAGTTCTGTGGCGTCAGGCTCTGGGACCGGCGCGGTGCTGTCGTTGGGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp CTGCTGCCGCGACCGCCGTCGTCGCCACCGCGCTCCTaGCAGGCGGACTTAGAGCGGAAGCTGAAGCCGAAG +
Preference number: 6 (lower is better)
Translates to: LLPRPPSSPPRS*QADLERKLKPK
Trigger: CTTCGGCTTCAGCTTCCGCTCTAAGTCCGCCTGGCAGGAGCGCGGTGGCGACGACGGCGGTCGCGGCAGCAG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 90 bp GTCGTCATCGCCACCGCGCCAACGGCTGGCCAGGCGCTGCTGCTGTaGTGGGGTCACCGCTCCCCCAGATCTCTTGGTGGAGCCGCGGGT +
Preference number: 6 (lower is better)
Translates to: VVIATAPTAGQALLL*WGHRSPRSLGGAAG
Trigger: ACCCGCGGCTCCACCAAGAGATCTGGGGGAGCGGTGACCCCACAACAGCAGCAGCGCCTGGCCAGCCGTTGGCGCGGTGGCGATGACGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp TCGTCATCGCCACCGCGCCAACGGCTGGCCAGGCGCTaGTGCTGTTGTGGGGTCACCGCTCCCCCAGATCTC +
Preference number: 6 (lower is better)
Translates to: SSSPPRQRLARR*CCCGVTAPPDL
Trigger: GAGATCTGGGGGAGCGGTGACCCCACAACAGCAGCAGCGCCTGGCCAGCCGTTGGCGCGGTGGCGATGACGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp ACCGCGCCAACGGCTGGCCAGGCGCTGCTGCTGTTGTaGGGTCACCGCTCCCCCAGATCTCTTGGTGGAGCC +
Preference number: 6 (lower is better)
Translates to: TAPTAGQALLLL*GHRSPRSLGGA
Trigger: GGCTCCACCAAGAGATCTGGGGGAGCGGTGACCCCACAACAGCAGCAGCGCCTGGCCAGCCGTTGGCGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp GAGGGTCTTCGTCGTCATCGCCACCGCGCCAACGGCTaGCCAGGCGCTGCTGCTGTTGTGGGGTCACCGCTC +
Preference number: 6 (lower is better)
Translates to: EGLRRHRHRANG*PGAAAVVGSPL
Trigger: GAGCGGTGACCCCACAACAGCAGCAGCGCCTGGCCAGCCGTTGGCGCGGTGGCGATGACGACGAAGACCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 72 bp GCCACCGCGCCAACGGCTGGCCAGGCGCTGCTGCTGTaGTGGGGTCACCGCTCCCCCAGATCTCTTGGTGGA +
Preference number: 6 (lower is better)
Translates to: ATAPTAGQALLL*WGHRSPRSLGG
Trigger: TCCACCAAGAGATCTGGGGGAGCGGTGACCCCACAACAGCAGCAGCGCCTGGCCAGCCGTTGGCGCGGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp TCATCGCCACCGCGCCAACGGCTGGCCAGGCGCTGCTaGTGTTGTGGGGTCACCGCTCCCCCAGATCTCTTG +
Preference number: 6 (lower is better)
Translates to: SSPPRQRLARRC*CCGVTAPPDLL
Trigger: CAAGAGATCTGGGGGAGCGGTGACCCCACAACAGCAGCAGCGCCTGGCCAGCCGTTGGCGCGGTGGCGATGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS TCA 72 bp AGATGGCCAAGTGGAGAGCCGACAGAAGCACCCCGCTaGGCACCGCAGCCCTCATGCGCACAGGCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: RWPSGEPTEAPR*APQPSCAQAAG
Trigger: CCCTGCTGCCTGTGCGCATGAGGGCTGCGGTGCTCAGCGGGGTGCTTCTGTCGGCTCTCCACTTGGCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp CAGCAACAGGCCCACTACCTGGACGGCCAGCACCACTaGAATGAGCGCATAGCAGGCCAGGCCCATGTGGTC +
Preference number: 6 (lower is better)
Translates to: QQQAHYLDGQHH*NERIAGQAHVV
Trigger: GACCACATGGGCCTGGCCTGCTATGCGCTCATTGCAGTGGTGCTGGCCGTCCAGGTAGTGGGCCTGTTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp GACAGCAGGAGACGCTCCTGTTGCTGGTTCTCCCGCTaGGAATGGAGCCGAGCCTGGATACACTCCCGGGTC +
Preference number: 6 (lower is better)
Translates to: DSRRRSCCWFSR*EWSRAWIHSRV
Trigger: GACCCGGGAGTGTATCCAGGCTCGGCTCCATTCCCAGCGGGAGAACCAGCAACAGGAGCGTCTCCTGCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 72 bp GCCAGGCCCATGTGGTCCTGGTGGAACGCTGCACGGTaGCAGAGCACGGCCATGATAAGGATCACGCCCACA +
Preference number: 6 (lower is better)
Translates to: ARPMWSWWNAAR*QSTAMIRITPT
Trigger: TGTGGGCGTGATCCTTATCATGGCCGTGCTCTGCAACCGTGCAGCGTTCCACCAGGACCACATGGGCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp GCCAGCATGAGCACCAGCTTTCCAATGCAGCTGATCTaGAGGAACACGGAGCAGGCCAGCAGGCTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ASMSTSFPMQLI*RNTEQASRLSS
Trigger: GCTGCTCAGCCTGCTGGCCTGCTCCGTGTTCCTGCAGATCAGCTGCATTGGAAAGCTGGTGCTCATGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp GGCGCTCGGCTCCCCAGTGAGGCGGATTGTGTCCGATaGAGTTGGTTCTCTGGCGGTTCATCTTGGCGATCA +
Preference number: 6 (lower is better)
Translates to: GARLPSEADCVR*SWFSGGSSWRS
Trigger: TGATCGCCAAGATGAACCGCCAGAGAACCAACTCCATCGGACACAATCCGCCTCACTGGGGAGCCGAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp ATAGCAGGCCAGGCCCATGTGGTCCTGGTGGAACGCTaGACGGTTGCAGAGCACGGCCATGATAAGGATCAC +
Preference number: 6 (lower is better)
Translates to: IAGQAHVVLVER*TVAEHGHDKDH
Trigger: GTGATCCTTATCATGGCCGTGCTCTGCAACCGTGCAGCGTTCCACCAGGACCACATGGGCCTGGCCTGCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp CGGCTCCCCAGTGAGGCGGATTGTGTCCGATGGAGTTaGTTCTCTGGCGGTTCATCTTGGCGATCATGGCCT +
Preference number: 6 (lower is better)
Translates to: RLPSEADCVRWS*FSGGSSWRSWP
Trigger: AGGCCATGATCGCCAAGATGAACCGCCAGAGAACCAACTCCATCGGACACAATCCGCCTCACTGGGGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp AGTTTGTCCGACGGGAACTTCTTAGAGCGGAATATCTaGAGCAAGGCCAGGCAGCAGGCGCCCAACGACAGC +
Preference number: 6 (lower is better)
Translates to: SLSDGNFLERNI*SKARQQAPNDS
Trigger: GCTGTCGTTGGGCGCCTGCTGCCTGGCCTTGCTGCAGATATTCCGCTCTAAGAAGTTCCCGTCGGACAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp CAAAGCCCATCCTCTTCATCTCCTTTGACACCTGGTTaGCGCCCAAGTGGTTGTAGAAGGGGCGCTCGGCTC +
Preference number: 6 (lower is better)
Translates to: QSPSSSSPLTPG*RPSGCRRGARL
Trigger: GAGCCGAGCGCCCCTTCTACAACCACTTGGGCGGCAACCAGGTGTCAAAGGAGATGAAGAGGATGGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp GGAACTTGCGGACGTGTTCAGATCGCAGTCTGTCGATaGTCCTGGCATCGATGGCCCGACCCAGAAACTCGT +
Preference number: 6 (lower is better)
Translates to: GTCGRVQIAVCR*SWHRWPDPETR
Trigger: ACGAGTTTCTGGGTCGGGCCATCGATGCCAGGAGCATCGACAGACTGCGATCTGAACACGTCCGCAAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp GGTCTCCTGGAAGGCCTGTCTCTGGGAGACCTCAGCTaGGTAGTGAGTGCACACACCCACAATGTTGGTGCA +
Preference number: 6 (lower is better)
Translates to: GLLEGLSLGDLS*VVSAHTHNVGA
Trigger: TGCACCAACATTGTGGGTGTGTGCACTCACTACCCAGCTGAGGTCTCCCAGAGACAGGCCTTCCAGGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 72 bp AAGTCTATGGCATTGGCGGTGACCAGAAGGTCAGCGTaGTCGAAGAGTGTGACGCCGGGCACCTCCACGATG +
Preference number: 6 (lower is better)
Translates to: KSMALAVTRRSA*SKSVTPGTSTM
Trigger: CATCGTGGAGGTGCCCGGCGTCACACTCTTCGACAACGCTGACCTTCTGGTCACCGCCAATGCCATAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 90 bp CATTCTTGTCCTTGGGGTCCTCAAAGCCCATCCTCTTCATCTCCTTaGACACCTGGTTGCCGCCCAAGTGGTTGTAGAAGGGGCGCTCGG +
Preference number: 6 (lower is better)
Translates to: HSCPWGPQSPSSSSP*TPGCRPSGCRRGAR
Trigger: CCGAGCGCCCCTTCTACAACCACTTGGGCGGCAACCAGGTGTCAAAGGAGATGAAGAGGATGGGCTTTGAGGACCCCAAGGACAAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 90 bp AACACCAGGGTGATGGTGAATACCCCGACCAGGGTGCTGTTCTTCTaGGATCGCACTATCTTCCTGGAGAGTGTCTGCAGGGGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: NTRVMVNTPTRVLFF*DRTIFLESVCRGVG
Trigger: CCCCACTCCCCTGCAGACACTCTCCAGGAAGATAGTGCGATCCAAGAAGAACAGCACCCTGGTCGGGGTATTCACCATCACCCTGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp GATGGCCCGACCCAGAAACTCGTCCACTTCATCCTCTaGGTTCGCACTTTCCTGGGCATTCTTGTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: DGPTQKLVHFIL*VRTFLGILVLG
Trigger: CCCAAGGACAAGAATGCCCAGGAAAGTGCGAACCCAGAGGATGAAGTGGACGAGTTTCTGGGTCGGGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp GTTCAGATCGCAGTCTGTCGATGCTCCTGGCATCGATaGCCCGACCCAGAAACTCGTCCACTTCATCCTCTG +
Preference number: 6 (lower is better)
Translates to: VQIAVCRCSWHR*PDPETRPLHPL
Trigger: CAGAGGATGAAGTGGACGAGTTTCTGGGTCGGGCCATCGATGCCAGGAGCATCGACAGACTGCGATCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp AGCTGTTTCAGCAGAAACTGGTCCTGGGAGTTGGTGTaGAGAGAGATGGCCAAGTGGAGAGCCGACAGAAGC +
Preference number: 6 (lower is better)
Translates to: SCFSRNWSWELV*REMAKWRADRS
Trigger: GCTTCTGTCGGCTCTCCACTTGGCCATCTCTCTGCACACCAACTCCCAGGACCAGTTTCTGCTGAAACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp TGCGTTGACCTGGTTCACCGTGATGTTGTGCTCCTCTaGCAGGCAGCCCACCAGGTTCTTAGAGTTGCACAT +
Preference number: 6 (lower is better)
Translates to: CVDLVHRDVVLL*QAAHQVLRVAH
Trigger: ATGTGCAACTCTAAGAACCTGGTGGGCTGCCTGGCAGAGGAGCACAACATCACGGTGAACCAGGTCAACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp AGCGAAGTCTGCAATAGCCTTGATGTGGGTCTTGCCTaGCTTGTCATAGGTGGAGTCGTTGAGGCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: SEVCNSLDVGLA*LVIGGVVEARG
Trigger: GCCTCTGGCCTCAACGACTCCACCTATGACAAGGCAGGCAAGACCCACATCAAGGCTATTGCAGACTTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 72 bp GAGACAAGCTGTTTCAGCAGAAACTGGTCCTGGGAGTaGGTGTGCAGAGAGATGGCCAAGTGGAGAGCCGAC +
Preference number: 6 (lower is better)
Translates to: ETSCFSRNWSWE*VCREMAKWRAD
Trigger: GTCGGCTCTCCACTTGGCCATCTCTCTGCACACCAACTCCCAGGACCAGTTTCTGCTGAAACAGCTTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 90 bp AGGACATTGGAGACAAGCTGTTTCAGCAGAAACTGGTCCTGGGAGTaGGTGTGCAGAGAGATGGCCAAGTGGAGAGCCGACAGAAGCACC +
Preference number: 6 (lower is better)
Translates to: RTLETSCFSRNWSWE*VCREMAKWRADRST
Trigger: GGTGCTTCTGTCGGCTCTCCACTTGGCCATCTCTCTGCACACCAACTCCCAGGACCAGTTTCTGCTGAAACAGCTTGTCTCCAATGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS TCA 72 bp CCTGCTTGGAGTACTTCTTCTCTAAGTCGGGCTCCCTaGAGGTCAGGAGGAACTTGCGGACGTGTTCAGATC +
Preference number: 6 (lower is better)
Translates to: PAWSTSSLSRAP*RSGGTCGRVQI
Trigger: GATCTGAACACGTCCGCAAGTTCCTCCTGACCTTCAGGGAGCCCGACTTAGAGAAGAAGTACTCCAAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp CAGGCTGTAGTTGAAGGCCGACTCCATCACATGACATaGGTTGACCTGGTTCACCGTGATGTTGTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: QAVVEGRLHHMT*VDLVHRDVVLL
Trigger: GAGGAGCACAACATCACGGTGAACCAGGTCAACGCATGTCATGTGATGGAGTCGGCCTTCAACTACAGCCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp AGACAAGCTGTTTCAGCAGAAACTGGTCCTGGGAGTTaGTGTGCAGAGAGATGGCCAAGTGGAGAGCCGACA +
Preference number: 6 (lower is better)
Translates to: RQAVSAETGPGS*CAERWPSGEPT
Trigger: TGTCGGCTCTCCACTTGGCCATCTCTCTGCACACCAACTCCCAGGACCAGTTTCTGCTGAAACAGCTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp AACTCGTCCACTTCATCCTCTGGGTTCGCACTTTCCTaGGCATTCTTGTCCTTGGGGTCCTCAAAGCCCATC +
Preference number: 6 (lower is better)
Translates to: NSSTSSSGFALS*AFLSLGSSKPI
Trigger: GATGGGCTTTGAGGACCCCAAGGACAAGAATGCCCAGGAAAGTGCGAACCCAGAGGATGAAGTGGACGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 72 bp GTGATGGTGAATACCCCGACCAGGGTGCTGTTCTTCTaGGATCGCACTATCTTCCTGGAGAGTGTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VMVNTPTRVLFF*DRTIFLESVCR
Trigger: CCTGCAGACACTCTCCAGGAAGATAGTGCGATCCAAGAAGAACAGCACCCTGGTCGGGGTATTCACCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 90 bp TCTGCCAGGCAGCCCACCAGGTTCTTAGAGTTGCACATGAACATGTaGACAAAAGCCGAGAGGAACACCAGGGTGATGGTGAATACCCCG +
Preference number: 6 (lower is better)
Translates to: SARQPTRFLELHMNM*TKAERNTRVMVNTP
Trigger: CGGGGTATTCACCATCACCCTGGTGTTCCTCTCGGCTTTTGTCAACATGTTCATGTGCAACTCTAAGAACCTGGTGGGCTGCCTGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp TGGAGTTGGTTCTCTGGCGGTTCATCTTGGCGATCATaGCCTTCTCTTCTTTCCGCTTCTGGGTACAGCTCA +
Preference number: 6 (lower is better)
Translates to: WSWFSGGSSWRS*PSLLSASGYSS
Trigger: TGAGCTGTACCCAGAAGCGGAAAGAAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAGAACCAACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 72 bp TTGTGTCCGATGGAGTTGGTTCTCTGGCGGTTCATCTaGGCGATCATGGCCTTCTCTTCTTTCCGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: LCPMELVLWRFI*AIMAFSSFRFW
Trigger: CCAGAAGCGGAAAGAAGAGAAGGCCATGATCGCCAAGATGAACCGCCAGAGAACCAACTCCATCGGACACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 72 bp TCCTCTGGGTTCGCACTTTCCTGGGCATTCTTGTCCTaGGGGTCCTCAAAGCCCATCCTCTTCATCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SSGFALSWAFLS*GSSKPILFISF
Trigger: AAAGGAGATGAAGAGGATGGGCTTTGAGGACCCCAAGGACAAGAATGCCCAGGAAAGTGCGAACCCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 90 bp AACTCGTCCACTTCATCCTCTGGGTTCGCACTTTCCTGGGCATTCTaGTCCTTGGGGTCCTCAAAGCCCATCCTCTTCATCTCCTTTGAC +
Preference number: 6 (lower is better)
Translates to: NSSTSSSGFALSWAF*SLGSSKPILFISFD
Trigger: GTCAAAGGAGATGAAGAGGATGGGCTTTGAGGACCCCAAGGACAAGAATGCCCAGGAAAGTGCGAACCCAGAGGATGAAGTGGACGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp ATGAGGACATTGGAGACAAGCTGTTTCAGCAGAAACTaGTCCTGGGAGTTGGTGTGCAGAGAGATGGCCAAG +
Preference number: 6 (lower is better)
Translates to: MRTLETSCFSRN*SWELVCREMAK
Trigger: CTTGGCCATCTCTCTGCACACCAACTCCCAGGACCAGTTTCTGCTGAAACAGCTTGTCTCCAATGTCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CCA 72 bp ATCGCACTATCTTCCTGGAGAGTGTCTGCAGGGGAGTaGGGAAAAGCTTCACACAGGCATAGATCACAGACA +
Preference number: 6 (lower is better)
Translates to: IALSSWRVSAGE*GKASHRHRSQT
Trigger: TGTCTGTGATCTATGCCTGTGTGAAGCTTTTCCCCACTCCCCTGCAGACACTCTCCAGGAAGATAGTGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS CAA 72 bp CAGCCCACCAGGTTCTTAGAGTTGCACATGAACATGTaGACAAAAGCCGAGAGGAACACCAGGGTGATGGTG +
Preference number: 6 (lower is better)
Translates to: QPTRFLELHMNM*TKAERNTRVMV
Trigger: CACCATCACCCTGGTGTTCCTCTCGGCTTTTGTCAACATGTTCATGTGCAACTCTAAGAACCTGGTGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3
CDS GCA 72 bp GTACTTCATTTGGTCCATCAGCTTCATAGCGAAGTCTaGAATAGCCTTGATGTGGGTCTTGCCTGCCTTGTC +
Preference number: 6 (lower is better)
Translates to: VLHLVHQLHSEV*NSLDVGLACLV
Trigger: GACAAGGCAGGCAAGACCCACATCAAGGCTATTGCAGACTTCGCTATGAAGCTGATGGACCAAATGAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114913.3