RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADCY10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026567

Ensembl transcript IDs: ENSMUST00000027852.15, ENSMUST00000111439.8, ENSMUST00000111440.8, ENSMUST00000148550.8, ENSMUST00000155216.8, ENSMUST00000193149.2

Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCCAGCTCTCCTGCCGCTACTGCAAAAGCCAGACCATCCGAACATaGCCTCTGCCCACTATGCTGCTCACACACACACATACACCCCTG +
Preference number: 1 (lower is better)
Translates to: TQLSCRYCKSQTIRT*PLPTMLLTHTHTPL
Trigger: CAGGGGTGTATGTGTGTGTGTGAGCAGCATAGTGGGCAGAGGTCATGTTCGGATGGTCTGGCTTTTGCAGTAGCGGCAGGAGAGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR CCA 90 bp GTTCCTAGGTTTGGCCCAGAAGGGTCTGTGGGAACCTGGGCATGCTaGCGGTGCAGAGAGGGCAATAACAGATCATGGGAAGACAGTGGT +
Preference number: 1 (lower is better)
Translates to: VPRFGPEGSVGTWAC*RCREGNNRSWEDSG
Trigger: ACCACTGTCTTCCCATGATCTGTTATTGCCCTCTCTGCACCGCCAGCATGCCCAGGTTCCCACAGACCCTTCTGGGCCAAACCTAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR CCA 90 bp CAGGCATCTGTTCCTAGGTTTGGCCCAGAAGGGTCTGTGGGAACCTaGGCATGCTGGCGGTGCAGAGAGGGCAATAACAGATCATGGGAA +
Preference number: 1 (lower is better)
Translates to: QASVPRFGPEGSVGT*ACWRCREGNNRSWE
Trigger: TTCCCATGATCTGTTATTGCCCTCTCTGCACCGCCAGCATGCCCAGGTTCCCACAGACCCTTCTGGGCCAAACCTAGGAACAGATGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR TCA 90 bp GCCACAAGGGTCTCCAAGGCCTTGAGTATCTCCACCCCACTGTCCTaGGCGTTCTCGGCCTGTTCTTCTATTTGCTTCTGCAAGTGGAGG +
Preference number: 1 (lower is better)
Translates to: ATRVSKALSISTPLS*AFSACSSICFCKWR
Trigger: CCTCCACTTGCAGAAGCAAATAGAAGAACAGGCCGAGAACGCTCAGGACAGTGGGGTGGAGATACTCAAGGCCTTGGAGACCCTTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 90 bp TGCTCCAACCCAGGGCTCCCCCTGAGGAAGGTCACTATTGCTTACTaGACTCTGCTTCTGCTGGGGCTGCAAGTCACTGCTCAATCCCTT +
Preference number: 1 (lower is better)
Translates to: CSNPGLPLRKVTIAY*TLLLLGLQVTAQSL
Trigger: AAGGGATTGAGCAGTGACTTGCAGCCCCAGCAGAAGCAGAGTTCAGTAAGCAATAGTGACCTTCCTCAGGGGGAGCCCTGGGTTGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR GCA 90 bp GATCCTCCACAGCAAGGAGAAGCAGGAAGCTTGCAGGTAAAGTTGTaGCAGTTTCTTCCCTGGCACCGAGCCCTCCTGGGTATGCTGGTT +
Preference number: 1 (lower is better)
Translates to: DPPQQGEAGSLQVKL*QFLPWHRALLGMLV
Trigger: AACCAGCATACCCAGGAGGGCTCGGTGCCAGGGAAGAAACTGGCACAACTTTACCTGCAAGCTTCCTGCTTCTCCTTGCTGTGGAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 90 bp AGGTTTGGCCCAGAAGGGTCTGTGGGAACCTGGGCATGCTGGCGGTaGAGAGAGGGCAATAACAGATCATGGGAAGACAGTGGTTCTTAC +
Preference number: 1 (lower is better)
Translates to: RFGPEGSVGTWACWR*REGNNRSWEDSGSY
Trigger: GTAAGAACCACTGTCTTCCCATGATCTGTTATTGCCCTCTCTGCACCGCCAGCATGCCCAGGTTCCCACAGACCCTTCTGGGCCAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR CCA 90 bp GGAGAAGCAGGAAGCTTGCAGGTAAAGTTGTGCCAGTTTCTTCCCTaGCACCGAGCCCTCCTGGGTATGCTGGTTCATGAAGTGGGAGAG +
Preference number: 1 (lower is better)
Translates to: GEAGSLQVKLCQFLP*HRALLGMLVHEVGE
Trigger: CTCTCCCACTTCATGAACCAGCATACCCAGGAGGGCTCGGTGCCAGGGAAGAAACTGGCACAACTTTACCTGCAAGCTTCCTGCTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 90 bp CACAGACCTTGTCCCGGATTTCCTGAGGCTGCATGGTACCAAGCGTaGTGTAGGTGGTGTTCCGGTTCTTCATTATGGCATTGGCAGCTG +
Preference number: 1 (lower is better)
Translates to: HRPCPGFPEAAWYQA*CRWCSGSSLWHWQL
Trigger: CAGCTGCCAATGCCATAATGAAGAACCGGAACACCACCTACATCACGCTTGGTACCATGCAGCCTCAGGAAATCCGGGACAAGGTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 90 bp GGGAGCAGAAGTCAAATATATCCACGGCACTTTCCAGCGCATGAGTaGTCTCATCGGGAGCCTTTTCCCCAGGGAAGCCGAAGACACAGA +
Preference number: 1 (lower is better)
Translates to: GSRSQIYPRHFPAHE*SHREPFPQGSRRHR
Trigger: TCTGTGTCTTCGGCTTCCCTGGGGAAAAGGCTCCCGATGAGATCACTCATGCGCTGGAAAGTGCCGTGGATATATTTGACTTCTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR TCA 90 bp ACCTGGGAGCAGAAGTCAAATATATCCACGGCACTTTCCAGCGCATaGGTGATCTCATCGGGAGCCTTTTCCCCAGGGAAGCCGAAGACA +
Preference number: 1 (lower is better)
Translates to: TWEQKSNISTALSSA*VISSGAFSPGKPKT
Trigger: TGTCTTCGGCTTCCCTGGGGAAAAGGCTCCCGATGAGATCACTCATGCGCTGGAAAGTGCCGTGGATATATTTGACTTCTGCTCCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR GCA 90 bp CTGTGTTCAGGAAGAAGTCACAGCTGTGCCCGTCTCCCATTAGTATaGAGACATAGGCCATCAGATGGTAGAGCCTCGGGTAGAAGACGG +
Preference number: 1 (lower is better)
Translates to: LCSGRSHSCARLPLV*RHRPSDGRASGRRR
Trigger: CCGTCTTCTACCCGAGGCTCTACCATCTGATGGCCTATGTCTGCATACTAATGGGAGACGGGCACAGCTGTGACTTCTTCCTGAACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 90 bp CATGTCTCACAGTGTGTCCAACGATCCCACAGAAGACAATCCCACTaGCAACACCGATGGAGACAGTACGGATTTTGTGGACCTGGGAGC +
Preference number: 1 (lower is better)
Translates to: HVSQCVQRSHRRQSH*QHRWRQYGFCGPGS
Trigger: GCTCCCAGGTCCACAAAATCCGTACTGTCTCCATCGGTGTTGCCAGTGGGATTGTCTTCTGTGGGATCGTTGGACACACTGTGAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR CCA 90 bp TTCTTCCCTGGCACCGAGCCCTCCTGGGTATGCTGGTTCATGAAGTaGGAGAGTCTGTTTTTCTCCACATGCATTTGGAAAGTCAGGGTG +
Preference number: 1 (lower is better)
Translates to: FFPGTEPSWVCWFMK*ESLFFSTCIWKVRV
Trigger: CACCCTGACTTTCCAAATGCATGTGGAGAAAAACAGACTCTCCCACTTCATGAACCAGCATACCCAGGAGGGCTCGGTGCCAGGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 90 bp CCATCTCACGGAGCTCCTCCTCTTCGCCGTAAGTTAACCCTTCCTTaGGCTTCAGGGCCAAAGAGCGATAATGAACCTCAAATGTTGGCA +
Preference number: 1 (lower is better)
Translates to: PSHGAPPLRRKLTLP*ASGPKSDNEPQMLA
Trigger: TGCCAACATTTGAGGTTCATTATCGCTCTTTGGCCCTGAAGCTCAAGGAAGGGTTAACTTACGGCGAAGAGGAGGAGCTCCGTGAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 90 bp CCAGTTTCTTCCCTGGCACCGAGCCCTCCTGGGTATGCTGGTTCATaGAGTGGGAGAGTCTGTTTTTCTCCACATGCATTTGGAAAGTCA +
Preference number: 1 (lower is better)
Translates to: PVSSLAPSPPGYAGS*SGRVCFSPHAFGKS
Trigger: TGACTTTCCAAATGCATGTGGAGAAAAACAGACTCTCCCACTTCATGAACCAGCATACCCAGGAGGGCTCGGTGCCAGGGAAGAAACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 90 bp TGTTGGGCCAGAGGCAGGATGACAATCTGGAGCAGTTCCTTACACTaGCAGGATTCCAGAGGGATGATGTCATTTGGAGACGATTTCATC +
Preference number: 1 (lower is better)
Translates to: CWARGRMTIWSSSLH*QDSRGMMSFGDDFI
Trigger: GATGAAATCGTCTCCAAATGACATCATCCCTCTGGAATCCTGCCAGTGTAAGGAACTGCTCCAGATTGTCATCCTGCCTCTGGCCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 90 bp TGTTGTTTTCTTCTAAGGCTACGAAATGTTGGGCCAGAGGCAGGATaGCAATCTGGAGCAGTTCCTTACACTGGCAGGATTCCAGAGGGA +
Preference number: 1 (lower is better)
Translates to: CCFLLRLRNVGPEAG*QSGAVPYTGRIPEG
Trigger: TCCCTCTGGAATCCTGCCAGTGTAAGGAACTGCTCCAGATTGTCATCCTGCCTCTGGCCCAACATTTCGTAGCCTTAGAAGAAAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 90 bp ACTGTTTGCGCCAAGATCTTCATAAACAGGGCTTCCAGTTGCTTCTaGTTTCTTATCTTGCTCATCCTGGACATCTCCCGGGAAACAGGG +
Preference number: 1 (lower is better)
Translates to: TVCAKIFINRASSCF*FLILLILDISRETG
Trigger: CCCTGTTTCCCGGGAGATGTCCAGGATGAGCAAGATAAGAAAGCAGAAGCAACTGGAAGCCCTGTTTATGAAGATCTTGGCGCAAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 90 bp ATCTCCAGGCTGCACTTAATCACCACCGTGATGATGTTCTTCAGTTaGTTTCGTTCCACTTTCCACAGGGCCAGCAAGGCATCACCTTTA +
Preference number: 1 (lower is better)
Translates to: ISRLHLITTVMMFFS*FRSTFHRASKASPL
Trigger: TAAAGGTGATGCCTTGCTGGCCCTGTGGAAAGTGGAACGAAAGCAACTGAAGAACATCATCACGGTGGTGATTAAGTGCAGCCTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR TCA 90 bp CTCAATTTCAATCATGCTCCGATCACAGAGCTGCCAGCAGTTTGGTaGCAAAATAACGTCGTTCATCTGAGCCATGTTCTGAGCAAGGCG +
Preference number: 1 (lower is better)
Translates to: LNFNHAPITELPAVW*QNNVVHLSHVLSKA
Trigger: CGCCTTGCTCAGAACATGGCTCAGATGAACGACGTTATTTTGTCACCAAACTGCTGGCAGCTCTGTGATCGGAGCATGATTGAAATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR GCA 90 bp TCTCTCACTGTTTGCGCCAAGATCTTCATAAACAGGGCTTCCAGTTaGTTCTGCTTTCTTATCTTGCTCATCCTGGACATCTCCCGGGAA +
Preference number: 1 (lower is better)
Translates to: SLTVCAKIFINRASS*FCFLILLILDISRE
Trigger: TTCCCGGGAGATGTCCAGGATGAGCAAGATAAGAAAGCAGAAGCAACTGGAAGCCCTGTTTATGAAGATCTTGGCGCAAACAGTGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 90 bp GCCATTGATCTCCTGTTAACTCGGAGGCTGAGTACCACCATTCCTTaGTCATGCTTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCT +
Preference number: 1 (lower is better)
Translates to: AIDLLLTRRLSTTIP*SCLANISPANSHVS
Trigger: AGACACATGGGAATTTGCTGGAGAAATGTTGGCTAAGCATGAGCAAGGAATGGTGGTACTCAGCCTCCGAGTTAACAGGAGATCAATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 90 bp CTGATCTTAGTCAGTGCAATAGCAACAGCCCTGTGGTTCTCATGCTaGGAGGCCAGATATTCGATTTCCATGAGTACCTGGCTTTTTCCA +
Preference number: 1 (lower is better)
Translates to: LILVSAIATALWFSC*EARYSISMSTWLFP
Trigger: TGGAAAAAGCCAGGTACTCATGGAAATCGAATATCTGGCCTCTCAGCATGAGAACCACAGGGCTGTTGCTATTGCACTGACTAAGATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR GCA 90 bp TGGGTATGCTGGTTCATGAAGTGGGAGAGTCTGTTTTTCTCCACATaGATTTGGAAAGTCAGGGTGAGCAGATTGCAGGGAAACATTCTG +
Preference number: 1 (lower is better)
Translates to: WVCWFMKWESLFFST*IWKVRVSRLQGNIL
Trigger: CAGAATGTTTCCCTGCAATCTGCTCACCCTGACTTTCCAAATGCATGTGGAGAAAAACAGACTCTCCCACTTCATGAACCAGCATACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 90 bp GATCTCCTGTTAACTCGGAGGCTGAGTACCACCATTCCTTGCTCATaGTTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCTCAGAAA +
Preference number: 1 (lower is better)
Translates to: DLLLTRRLSTTIPCS*LANISPANSHVSQK
Trigger: TTTCTGAGACACATGGGAATTTGCTGGAGAAATGTTGGCTAAGCATGAGCAAGGAATGGTGGTACTCAGCCTCCGAGTTAACAGGAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 90 bp ACGTCCCAGCAAAGGGTAGCCCTCATATCTGTTGCAGATGAGATATaGCATACCAAACATGACTTTCTCATTGAGGCCCAAACACTGATA +
Preference number: 1 (lower is better)
Translates to: TSQQRVALISVADEI*HTKHDFLIEAQTLI
Trigger: TATCAGTGTTTGGGCCTCAATGAGAAAGTCATGTTTGGTATGGCATATCTCATCTGCAACAGATATGAGGGCTACCCTTTGCTGGGACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR TCA 90 bp GAGATATCTCTTTTAGCGATGCTGGAGGTGACAAATTATTCAGCCTaGCACCACTCACAAGGTAACAGACTTCTTTCTGCCCCTCAGATA +
Preference number: 1 (lower is better)
Translates to: EISLLAMLEVTNYSA*HHSQGNRLLSAPQI
Trigger: TATCTGAGGGGCAGAAAGAAGTCTGTTACCTTGTGAGTGGTGTCAGGCTGAATAATTTGTCACCTCCAGCATCGCTAAAAGAGATATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 90 bp CAGCCCTGTGGTTCTCATGCTGAGAGGCCAGATATTCGATTTCCATaGGTACCTGGCTTTTTCCATATCCTGGTAATCCTTCATACATTA +
Preference number: 1 (lower is better)
Translates to: QPCGSHAERPDIRFP*VPGFFHILVILHTL
Trigger: TAATGTATGAAGGATTACCAGGATATGGAAAAAGCCAGGTACTCATGGAAATCGAATATCTGGCCTCTCAGCATGAGAACCACAGGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR TCA 90 bp AGATATGCCATACCAAACATGACTTTCTCATTGAGGCCCAAACACTaGTACACGGGTCCAGGATCTGCAACTCCTTTCATAACTTTCTTC +
Preference number: 1 (lower is better)
Translates to: RYAIPNMTFSLRPKH*YTGPGSATPFITFF
Trigger: GAAGAAAGTTATGAAAGGAGTTGCAGATCCTGGACCCGTGTATCAGTGTTTGGGCCTCAATGAGAAAGTCATGTTTGGTATGGCATATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR GCA 90 bp GATATGGAAGTGAAAAGTTGCATGTCATCTGTTGGCCTAACAGAGTaGTTGAACATGTTATTCCAGGTCACGTTTGTCTTTTGCTCAGTC +
Preference number: 1 (lower is better)
Translates to: DMEVKSCMSSVGLTE*LNMLFQVTFVFCSV
Trigger: GACTGAGCAAAAGACAAACGTGACCTGGAATAACATGTTCAAGCACTCTGTTAGGCCAACAGATGACATGCAACTTTTCACTTCCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 90 bp ATGTCCTCTTCTGTTACAGAAAGGTCCCACAACCATCCCAGCACCTaGACCAAATGTTTATATCTGCTTTTCAAGAAAAGAGGTTTACTC +
Preference number: 1 (lower is better)
Translates to: MSSSVTERSHNHPST*TKCLYLLFKKRGLL
Trigger: GAGTAAACCTCTTTTCTTGAAAAGCAGATATAAACATTTGGTCCAGGTGCTGGGATGGTTGTGGGACCTTTCTGTAACAGAAGAGGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 90 bp AGTATCTGTGGTTCTCATGCTGAGAGGCCAGATATTCGATTTCCATaGGTACCTGGCTTTTTCCATATCCTGGTAATCCTTCATACATTA +
Preference number: 1 (lower is better)
Translates to: SICGSHAERPDIRFP*VPGFFHILVILHTL
Trigger: TAATGTATGAAGGATTACCAGGATATGGAAAAAGCCAGGTACTCATGGAAATCGAATATCTGGCCTCTCAGCATGAGAACCACAGATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR GCA 90 bp CTCTCATCAGGTACTTGTTCTTTTGAACATCCTGAAGGGTTACCTTaGCTGATACAATTTTATCCCATGATGGAAGACTCAAGACTGTCT +
Preference number: 1 (lower is better)
Translates to: LSSGTCSFEHPEGLP*LIQFYPMMEDSRLS
Trigger: AGACAGTCTTGAGTCTTCCATCATGGGATAAAATTGTATCAGGCAAGGTAACCCTTCAGGATGTTCAAAAGAACAAGTACCTGATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 90 bp CATCAGATGGTAGAGCCTCGGGTAGAAGACGGGGCCGGTGGTATTTaGAGCCACAAGGGTCTCCAAGGCCTTGAGTATCTCCACCCCACT +
Preference number: 2 (lower is better)
Translates to: HQMVEPRVEDGAGGI*SHKGLQGLEYLHPT
Trigger: AGTGGGGTGGAGATACTCAAGGCCTTGGAGACCCTTGTGGCTCAAAATACCACCGGCCCCGTCTTCTACCCGAGGCTCTACCATCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TGGCCCAGTGTGTCGGCTGTATACGCCATGATCTCAATGGCCTCGCCTTTCAGGCTTTCTTCTGGTCCTTaGGCCACAGTTCGTAGGCTG +
Preference number: 2 (lower is better)
Translates to: WPSVSAVYAMISMASPFRLSSGP*ATVRRL
Trigger: CAGCCTACGAACTGTGGCTCAAGGACCAGAAGAAAG...CCTGAAAGGCGAGGCCATTGAGATCATGGCGTATACAGCCGACACACTGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTGAGCCACAAGGGTCTCCAAGGCCTTGAGTATCTCCACCCCACTGTCCTGAGCAGTTGTCTCCCAGGATaGGGTAGGCAGATGCCAGTT +
Preference number: 2 (lower is better)
Translates to: LSHKGLQGLEYLHPTVLSSCLPG*GRQMPV
Trigger: AACTGGCATCTGCCTACCTCATCCTGGGAGACAACT...GCTCAGGACAGTGGGGTGGAGATACTCAAGGCCTTGGAGACCCTTGTGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp TGGGCCGAGCCCCACAGGTCAAGCAAACAGCCAGGGGAGGTAAAGGCAGCTGTGGTTCCATCCACAAACTaGGCCTCATCGATGATGAAA +
Preference number: 2 (lower is better)
Translates to: WAEPHRSSKQPGEVKAAVVPSTN*ASSMMK
Trigger: TTTCATCATCGATGAGGCCCAGTTTGTGGATGGAAC...CACAGCTGCCTTTACCTCCCCTGGCTGTTTGCTTGACCTGTGGGGCTCGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR-3UTR CCA 90 bp ACAGCCAGGGGAGGTAAAGGCAGCTGTGCACAGCTAAAAGCAAGCCAGGCTTTGAGAAGACGGGGCCGGTaGTATTTTGAGCCACAAGGG +
Preference number: 2 (lower is better)
Translates to: TARGGKGSCAQLKASQALRRRGR*YFEPQG
Trigger: CCCTTGTGGCTCAAAATACCACCGGCCCCGTCTTCT...CAAAGCCTGGCTTGCTTTTAGCTGTGCACAGCTGCCTTTACCTCCCCTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR-3UTR TCA 90 bp GCCATGATCTCAATGGCCTCGCCTTTCAGGGGGAGGTTCAGGAGCTGCTCCATGCTGTGGTTCTCATGCTaGGAGGCCAGATATTCGATT +
Preference number: 2 (lower is better)
Translates to: AMISMASPFRGRFRSCSMLWFSC*EARYSI
Trigger: AATCGAATATCTGGCCTCTCAGCATGAGAACCACAG...CATGGAGCAGCTCCTGAACCTCCCCCTGAAAGGCGAGGCCATTGAGATCATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp CCACAGCAAGGAGAAGCAGGAAGCTTGCAGGTAAAGTTGTGCCAGTTTCTTCCCGGGCCAGAGGCAGGATaGCAATCTGGAGCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: PQQGEAGSLQVKLCQFLPGPEAG*QSGAVP
Trigger: AGGAACTGCTCCAGATTGTCATCCTGCCTCTGGCCC...GGGAAGAAACTGGCACAACTTTACCTGCAAGCTTCCTGCTTCTCCTTGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp GTGGTAGGGAATGAAGTCTACGTTTCTGCAGTGGTTGCACCGATGGGCACTTTCGGCACCGAGCCCTCCTaGGTATGCTGGTTCATGAAG +
Preference number: 2 (lower is better)
Translates to: VVGNEVYVSAVVAPMGTFGTEPS*VCWFMK
Trigger: CTTCATGAACCAGCATACCCAGGAGGGCTCGGTGCC...GAAAGTGCCCATCGGTGCAACCACTGCAGAAACGTAGACTTCATTCCCTACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp GTCCCACTCTTGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAGAGAAGACGGGGCCGGTaGTATTTTGAGCCACAAGGG +
Preference number: 2 (lower is better)
Translates to: VPLLKSGIPDSDAGVKSQRRRGR*YFEPQG
Trigger: CCCTTGTGGCTCAAAATACCACCGGCCCCGTCTTCT...CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTGAGCCACAAGGGTCTCCAAGGCCTTGAGTATCTCCACCCCACTGTCCTGAGCGTCCGCTCTGGAACTTaGGGATTCTGTTGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: LSHKGLQGLEYLHPTVLSVRSGT*GFCCLH
Trigger: ATGAAGACAACAGAATCCTCAAGTTCCAGAGCGGAC...GCTCAGGACAGTGGGGTGGAGATACTCAAGGCCTTGGAGACCCTTGTGGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp GCACTCAACCACCTCTCCTTCCATCTCACGGAGCTCCTCCTCTTCGCCGTAAGTGCTGATCTTAGTCAGTaGAATAGCAACAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: ALNHLSFHLTELLLFAVSADLSQ*NSNSPV
Trigger: CACAGGGCTGTTGCTATTGCACTGACTAAGATCAGC...ACTTACGGCGAAGAGGAGGAGCTCCGTGAGATGGAAGGAGAGGTGGTTGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR CAA 90 bp AGGGGAGGTAAAGGCAGCTGTGCACAGCTAAAAGCAAGCCAGGCTTaGGCCCTGACTGACTTAAGGGAAGAAATCCAGGCATCTGTTCCT +
Preference number: 2 (lower is better)
Translates to: RGGKGSCAQLKASQA*ALTDLREEIQASVP
Trigger: AGGAACAGATGCCTGGATTTCTTCCCTTAAGTCAGTCAGGGCCAAAGCCTGGCTTGCTTTTAGCTGTGCACAGCTGCCTTTACCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR CAA 90 bp GCCAGCCCTATCTTAACTCGAATGTCCAGGCCTTCTTCAGCCTCCTaGGCTTCAAACAAGCCATGGATCTCCAGGCTGCACTTAATCACC +
Preference number: 2 (lower is better)
Translates to: ASPILTRMSRPSSAS*ASNKPWISRLHLIT
Trigger: GGTGATTAAGTGCAGCCTGGAGATCCATGGCTTGTTTGAAGCCAAGGAGGCTGAAGAAGGCCTGGACATTCGAGTTAAGATAGGGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp CTCAATGGCCTCGCCTTTCAGGGGGAGGTTCAGGAGCTGCTCCATGACCAGTATCGGGAAACAGGGAACTaGACATGGAAGATGTCATTA +
Preference number: 2 (lower is better)
Translates to: LNGLAFQGEVQELLHDQYRETGN*TWKMSL
Trigger: TAATGACATCTTCCATGTTCAGTTCCCTGTTTCCCG...ATACTGGTCATGGAGCAGCTCCTGAACCTCCCCCTGAAAGGCGAGGCCATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTGAGCCACAAGGGTCTCCAAGGCCTTGAGTATCTCCACCCCACTGTCCTGAGCTTTCCTAGGGAGCTCTaGCTTAGAAAAGATGGCTTC +
Preference number: 2 (lower is better)
Translates to: LSHKGLQGLEYLHPTVLSFPREL*LRKDGF
Trigger: GAAGCCATCTTTTCTAAGTCAGAGCTCCCTAGGAAA...GCTCAGGACAGTGGGGTGGAGATACTCAAGGCCTTGGAGACCCTTGTGGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp ACAGCCAGGGGAGGTAAAGGCAGCTGTGCACAGCTAAAAGCAAGCCAGGCTTTGTTTGGAAAGTCAGGGTaGGCAGATTGCAGGGAAACA +
Preference number: 2 (lower is better)
Translates to: TARGGKGSCAQLKASQALFGKSG*ADCRET
Trigger: TGTTTCCCTGCAATCTGCTCACCCTGACTTTCCAAA...CAAAGCCTGGCTTGCTTTTAGCTGTGCACAGCTGCCTTTACCTCCCCTGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR-3UTR CCA 90 bp GTCCCACTCTTGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAGGGCAGGATGACAATCTaGAGCAGTTCCTTACACTGG +
Preference number: 2 (lower is better)
Translates to: VPLLKSGIPDSDAGVKSQGRMTI*SSSLHW
Trigger: CCAGTGTAAGGAACTGCTCCAGATTGTCATCCTGCC...CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp TTGAGCCACAAGGGTCTCCAAGGCCTTGAGTATCTCCACCCCACTGTCCTGAGCTTCTCCACATGCATTTaGAAAGTCAGGGTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: LSHKGLQGLEYLHPTVLSFSTCI*KVRVSR
Trigger: TCTGCTCACCCTGACTTTCCAAATGCATGTGGAGAA...GCTCAGGACAGTGGGGTGGAGATACTCAAGGCCTTGGAGACCCTTGTGGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp ATGACAATCTGGAGCAGTTCCTTACACTGGCAGGATTCCAGAGGGATGATGTCAGGCACCGAGCCCTCCTaGGTATGCTGGTTCATGAAG +
Preference number: 2 (lower is better)
Translates to: MTIWSSSLHWQDSRGMMSGTEPS*VCWFMK
Trigger: CTTCATGAACCAGCATACCCAGGAGGGCTCGGTGCC...TGACATCATCCCTCTGGAATCCTGCCAGTGTAAGGAACTGCTCCAGATTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp ATTTTCCTGCTCCAACCCAGGGCTCCCCCTGAGGAAGGTCACTATTGCTTACTGAGGAGGAGTCCGCTCTaGAACTTGAGGATTCTGTTG +
Preference number: 2 (lower is better)
Translates to: IFLLQPRAPPEEGHYCLLRRSPL*NLRILL
Trigger: CAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCT...CAGTAAGCAATAGTGACCTTCCTCAGGGGGAGCCCTGGGTTGGAGCAGGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR CAA 90 bp TATCTCCACCCCACTGTCCTGAGCGTTCTCGGCCTGTTCTTCTATTaGCTTCTGCAAGTGGAGGACTTGCCCTTCCATGTACCTAGAGAT +
Preference number: 2 (lower is better)
Translates to: YLHPTVLSVLGLFFY*LLQVEDLPFHVPRD
Trigger: ATCTCTAGGTACATGGAAGGGCAAGTCCTCCACTTGCAGAAGCAAATAGAAGAACAGGCCGAGAACGCTCAGGACAGTGGGGTGGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TCCAGGCATCTGTTCCTAGGTTTGGCCCAGAAGGGTCTGTGGGAACCTGGGCATACAAATTATTCAGCCTaGCACCACTCACAAGGTAAC +
Preference number: 2 (lower is better)
Translates to: SRHLFLGLAQKGLWEPGHTNYSA*HHSQGN
Trigger: GTTACCTTGTGAGTGGTGTCAGGCTGAATAATTTGT...ATGCCCAGGTTCCCACAGACCCTTCTGGGCCAAACCTAGGAACAGATGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR-3UTR TCA 90 bp GCACTCAACCACCTCTCCTTCCATCTCACGGAGCTCCTCCTCTTCGCCGTAAGTATCTGGAAGTCATTTTaGGTTTCCAGGGAAGTGTTC +
Preference number: 2 (lower is better)
Translates to: ALNHLSFHLTELLLFAVSIWKSF*VSREVF
Trigger: GAACACTTCCCTGGAAACTCAAAATGACTTCCAGAT...ACTTACGGCGAAGAGGAGGAGCTCCGTGAGATGGAAGGAGAGGTGGTTGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCTCAGAAAGCTCCAAGGCTGCAAAGACCAACATGGTaGTGTGGCCAGCAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: LANISPANSHVSQKAPRLQRPTW*CGQQPA
Trigger: GGCTGGCTGCTGGCCACATCACCATGTTGGTCTTTG...CAGCCTTGGAGCTTTCTGAGACACATGGGAATTTGCTGGAGAAATGTTGGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCTCAGAAAGCTCCAAGGCTGGCACTTTCCAGCGCATaGGTGATCTCATCGGGAGCC +
Preference number: 2 (lower is better)
Translates to: LANISPANSHVSQKAPRLALSSA*VISSGA
Trigger: GGCTCCCGATGAGATCACTCATGCGCTGGAAAGTGC...CAGCCTTGGAGCTTTCTGAGACACATGGGAATTTGCTGGAGAAATGTTGGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp GCCATGATCTCAATGGCCTCGCCTTTCAGGGGGAGGTTCAGGAGCTGCTCCATGCTTTTGCTCAGTCTCTaGTTGTTGAAAAAGGAGAAC +
Preference number: 2 (lower is better)
Translates to: AMISMASPFRGRFRSCSMLLLSL*LLKKEN
Trigger: GTTCTCCTTTTTCAACAAGCAGAGACTGAGCAAAAG...CATGGAGCAGCTCCTGAACCTCCCCCTGAAAGGCGAGGCCATTGAGATCATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp GATGTCCTCTTCTGTTACAGAAAGGTCCCACAACCATCCCAGCACCTGGACCAACTCCGATCACAGAGCTaGCAGCAGTTTGGTGACAAA +
Preference number: 2 (lower is better)
Translates to: DVLFCYRKVPQPSQHLDQLRSQS*QQFGDK
Trigger: TTTGTCACCAAACTGCTGGCAGCTCTGTGATCGGAG...TTGGTCCAGGTGCTGGGATGGTTGTGGGACCTTTCTGTAACAGAAGAGGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp GATGTCCTCTTCTGTTACAGAAAGGTCCCACAACCATCCCAGCACCTGGACCAATCCGGTTCTTCATTATaGCATTGGCAGCTGCACAGG +
Preference number: 2 (lower is better)
Translates to: DVLFCYRKVPQPSQHLDQSGSSL*HWQLHR
Trigger: CCTGTGCAGCTGCCAATGCCATAATGAAGAACCGGA...TTGGTCCAGGTGCTGGGATGGTTGTGGGACCTTTCTGTAACAGAAGAGGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp ACAGTAATACGGAATCCCGCAGCTTCCCTCTACCAGGTACGAGTCGAGCTCTCTCAGTGGTTGCACCGATaGGCACTTTCTTCCAAAAAG +
Preference number: 2 (lower is better)
Translates to: TVIRNPAASLYQVRVELSQWLHR*ALSSKK
Trigger: CTTTTTGGAAGAAAGTGCCCATCGGTGCAACCACTG...AGAGAGCTCGACTCGTACCTGGTAGAGGGAAGCTGCGGGATTCCGTATTACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp GTCCCACTCTTGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAGCAGTGGTTGCACCGATaGGCACTTTCTTCCAAAAAG +
Preference number: 2 (lower is better)
Translates to: VPLLKSGIPDSDAGVKSQQWLHR*ALSSKK
Trigger: CTTTTTGGAAGAAAGTGCCCATCGGTGCAACCACTG...CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp TCCAGGCATCTGTTCCTAGGTTTGGCCCAGAAGGGTCTGTGGGAACCTGGGCATAACCATCCCAGCACCTaGACCAAATGTTTATATCTG +
Preference number: 2 (lower is better)
Translates to: SRHLFLGLAQKGLWEPGHNHPST*TKCLYL
Trigger: CAGATATAAACATTTGGTCCAGGTGCTGGGATGGTT...ATGCCCAGGTTCCCACAGACCCTTCTGGGCCAAACCTAGGAACAGATGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR CAA 90 bp GATCTCCAGGCTGCACTTAATCACCACCGTGATGATGTTCTTCAGTaGCTTTCGTTCCACTTTCCACAGGGCCAGCAAGGCATCACCTTT +
Preference number: 2 (lower is better)
Translates to: DLQAALNHHRDDVLQ*LSFHFPQGQQGITF
Trigger: AAAGGTGATGCCTTGCTGGCCCTGTGGAAAGTGGAACGAAAGCAACTGAAGAACATCATCACGGTGGTGATTAAGTGCAGCCTGGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp GGCACTTTCTTCCAAAAAGCGGGCACATTTCAGATGCAAGACTTTCTTCTGGTCGGGTGGCCAGGGCCTTaGTCATCATCTTCATGTTCC +
Preference number: 2 (lower is better)
Translates to: GTFFQKAGTFQMQDFLLVGWPGP*SSSSCS
Trigger: GGAACATGAAGATGATGATCAAGGCCCTGGCCACCC...GACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCGCTTTTTGGAAGAAAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp ATGACAATCTGGAGCAGTTCCTTACACTGGCAGGATTCCAGAGGGATGATGTCAAGGGAAACATTCTGTTaGGCAGCTTCAGCGCCTTCC +
Preference number: 2 (lower is better)
Translates to: MTIWSSSLHWQDSRGMMSRETFC*AASAPS
Trigger: GGAAGGCGCTGAAGCTGCTCAACAGAATGTTTCCCT...TGACATCATCCCTCTGGAATCCTGCCAGTGTAAGGAACTGCTCCAGATTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp GATGTCCTCTTCTGTTACAGAAAGGTCCCACAACCATCCCAGCACCTGGACCAAAAGTTGTCCCACTCTTaGAGTCTGGCATACCAGACA +
Preference number: 2 (lower is better)
Translates to: DVLFCYRKVPQPSQHLDQKLSHS*SLAYQT
Trigger: TGTCTGGTATGCCAGACTTCAAGAGTGGGACAACTT...TTGGTCCAGGTGCTGGGATGGTTGTGGGACCTTTCTGTAACAGAAGAGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp CTGCTCCAACCCAGGGCTCCCCCTGAGGAAGGTCACTATTGCTTACTGAACTCTGAGGTTTACTCAGTCTaGAGAGAACCATCTGGTATT +
Preference number: 2 (lower is better)
Translates to: LLQPRAPPEEGHYCLLNSEVYSV*REPSGI
Trigger: AATACCAGATGGTTCTCTGCAGACTGAGTAAACCTC...AGAGTTCAGTAAGCAATAGTGACCTTCCTCAGGGGGAGCCCTGGGTTGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR-3UTR GCA 90 bp GTCCCACTCTTGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAGGCCTGTTCTTCTATTTaGTTCTGCAAGTGGAGGACT +
Preference number: 2 (lower is better)
Translates to: VPLLKSGIPDSDAGVKSQACSSI*FCKWRT
Trigger: AGTCCTCCACTTGCAGAAGCAAATAGAAGAACAGGC...CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp GTAGCCAGCGAGGTGGTGGTACAGGGAAAAGTCCAGGTAAGCCTTGATGATCTGTGCTGGTTCATGAAGTaGGAGAGTCTGTTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: VASEVVVQGKVQVSLDDLCWFMK*ESLFFS
Trigger: GGAGAAAAACAGACTCTCCCACTTCATGAACCAGCA...CAGATCATCAAGGCTTACCTGGACTTTTCCCTGTACCACCACCTCGCTGGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 90 bp AGTCTGTTTTTCTCCACATGCATTTGGAAAGTCAGGGTGAGCAGATaGCAGGGAAACATTCTGTTGAGCAGCTTCAGCGCCTTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: SLFFSTCIWKVRVSR*QGNILLSSFSAFLS
Trigger: GCTGAGGAAGGCGCTGAAGCTGCTCAACAGAATGTTTCCCTGCAATCTGCTCACCCTGACTTTCCAAATGCATGTGGAGAAAAACAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp AAGACAATCCCACTGGCAACACCGATGGAGACAGTACGGATTTTGTGGACCTGGCGGGAAACAGGGAACTaGACATGGAAGATGTCATTA +
Preference number: 2 (lower is better)
Translates to: KTIPLATPMETVRILWTWRETGN*TWKMSL
Trigger: TAATGACATCTTCCATGTTCAGTTCCCTGTTTCCCG...CCAGGTCCACAAAATCCGTACTGTCTCCATCGGTGTTGCCAGTGGGATTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp ACAGTAATACGGAATCCCGCAGCTTCCCTCTACCAGGTACGAGTCGAGCTCTCTCCTCAGATATGGAAGTaGAAAGTTGCATGTCATCTG +
Preference number: 2 (lower is better)
Translates to: TVIRNPAASLYQVRVELSPQIWK*KVACHL
Trigger: CAGATGACATGCAACTTTTCACTTCCATATCTGAGG...AGAGAGCTCGACTCGTACCTGGTAGAGGGAAGCTGCGGGATTCCGTATTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp GGCACTTTCTTCCAAAAAGCGGGCACATTTCAGATGCAAGACTTTCTTCTGGTCAGTTGTCTCCCAGGATaGGGTAGGCAGATGCCAGTT +
Preference number: 2 (lower is better)
Translates to: GTFFQKAGTFQMQDFLLVSCLPG*GRQMPV
Trigger: AACTGGCATCTGCCTACCTCATCCTGGGAGACAACT...GACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCGCTTTTTGGAAGAAAGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp CTGCTCCAACCCAGGGCTCCCCCTGAGGAAGGTCACTATTGCTTACTGAACTCTACATTAGAACTCGGCTaGAGTTCGTCATCAAAAAGT +
Preference number: 2 (lower is better)
Translates to: LLQPRAPPEEGHYCLLNSTLELG*SSSSKS
Trigger: ACTTTTTGATGACGAACTGCAGCCGAGTTCTAATGT...AGAGTTCAGTAAGCAATAGTGACCTTCCTCAGGGGGAGCCCTGGGTTGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR-3UTR CCA 90 bp CTGCAGAGAACCATCTGGTATTTGTTGGGATTCCGAAGAAGTGACCACATCCTGTCCGGTTCTTCATTATaGCATTGGCAGCTGCACAGG +
Preference number: 2 (lower is better)
Translates to: LQRTIWYLLGFRRSDHILSGSSL*HWQLHR
Trigger: CCTGTGCAGCTGCCAATGCCATAATGAAGAACCGGA...CAGGATGTGGTCACTTCTTCGGAATCCCAACAAATACCAGATGGTTCTCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp GATATCTCTTTTAGCGATGCTGGAGGTGACAAATTATTCAGCCTGACACCACTCACCAACATGGTGATGTaGCCAGCAGCCAGCCCTATC +
Preference number: 2 (lower is better)
Translates to: DISFSDAGGDKLFSLTPLTNMVM*PAASPI
Trigger: GATAGGGCTGGCTGCTGGCCACATCACCATGTTGGT...GAGTGGTGTCAGGCTGAATAATTTGTCACCTCCAGCATCGCTAAAAGAGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTACCTCGACAGAGGCTTaGCATTTGCAATCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLTSTEA*HLQSCA
Trigger: TGCACAGGATTGCAAATGTCAAGCCTCTGTCGAGGT...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
3UTR-3UTR TCA 90 bp TTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCTCAGAAAGCTCCAAGGCTGAAGTTAACCCTTCCTTaGGCTTCAGGGCCAAAGAGC +
Preference number: 2 (lower is better)
Translates to: LANISPANSHVSQKAPRLKLTLP*ASGPKS
Trigger: GCTCTTTGGCCCTGAAGCTCAAGGAAGGGTTAACTT...CAGCCTTGGAGCTTTCTGAGACACATGGGAATTTGCTGGAGAAATGTTGGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp GATGTCCTCTTCTGTTACAGAAAGGTCCCACAACCATCCCAGCACCTGGACCAAACCTTAACTGCTCTCTaGTCTGGAATCCTCTCAATT +
Preference number: 2 (lower is better)
Translates to: DVLFCYRKVPQPSQHLDQTLTAL*SGILSI
Trigger: AATTGAGAGGATTCCAGATCAGAGAGCAGTTAAGGT...TTGGTCCAGGTGCTGGGATGGTTGTGGGACCTTTCTGTAACAGAAGAGGACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp GTCCCACTCTTGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAGATTTCCATGAGTACCTaGCTTTTTCCATATCCTGGT +
Preference number: 2 (lower is better)
Translates to: VPLLKSGIPDSDAGVKSQISMST*LFPYPG
Trigger: ACCAGGATATGGAAAAAGCCAGGTACTCATGGAAAT...CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 90 bp GTACAGGGAAAAGTCCAGGTAAGCCTTGATGATCTGGAAGTCATTTaGAGTTTCCAGGGAAGTGTTCATTTCCATCATCGCGGCCAGATG +
Preference number: 2 (lower is better)
Translates to: VQGKVQVSLDDLEVI*SFQGSVHFHHRGQM
Trigger: CATCTGGCCGCGATGATGGAAATGAACACTTCCCTGGAAACTCAAAATGACTTCCAGATCATCAAGGCTTACCTGGACTTTTCCCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 90 bp TTCAAGAAAAGAGGTTTACTCAGTCTGCAGAGAACCATCTGGTATTaGTTGGGATTCCGAAGAAGTGACCACATCCTGTGGGCTCGAGAG +
Preference number: 2 (lower is better)
Translates to: FKKRGLLSLQRTIWY*LGFRRSDHILWARE
Trigger: CTCTCGAGCCCACAGGATGTGGTCACTTCTTCGGAATCCCAACAAATACCAGATGGTTCTCTGCAGACTGAGTAAACCTCTTTTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 90 bp GAGATGCTTAGCTCTGTCGGAAAATTTGTTAAAGTTGTCCCACTCTaGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: EMLSSVGKFVKVVPL*KSGIPDSDAGVKSQ
Trigger: CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGACAACTTTAACAAATTTTCCGACAGAGCTAAGCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp GGCACTTTCTTCCAAAAAGCGGGCACATTTCAGATGCAAGACTTTCTTCTGGTCCTGTGGTTCTCATGCTaGGAGGCCAGATATTCGATT +
Preference number: 2 (lower is better)
Translates to: GTFFQKAGTFQMQDFLLVLWFSC*EARYSI
Trigger: AATCGAATATCTGGCCTCTCAGCATGAGAACCACAG...GACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCGCTTTTTGGAAGAAAGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp GGCACTTTCTTCCAAAAAGCGGGCACATTTCAGATGCAAGACTTTCTTCTGGTCGGGTATGCTGGTTCATaGAGTGGGAGAGTCTGTTTT +
Preference number: 2 (lower is better)
Translates to: GTFFQKAGTFQMQDFLLVGYAGS*SGRVCF
Trigger: AAAACAGACTCTCCCACTTCATGAACCAGCATACCC...GACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCGCTTTTTGGAAGAAAGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp TGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGCAGAGGCTTGACATTTaGAATCCTGTGCAGCTCCAA +
Preference number: 2 (lower is better)
Translates to: WLRKLAQTTLFFLILLLQQRLDI*NPVQLQ
Trigger: TTGGAGCTGCACAGGATTGCAAATGTCAAGCCTCTG...CTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
3UTR-3UTR GCA 90 bp GCAGAAGTCAAATATATCCACGGCACTTTCCAGCGCATGAGTGATCTCATCGGGGCTTCCAGTTGCTTCTaGTTTCTTATCTTGCTCATC +
Preference number: 2 (lower is better)
Translates to: AEVKYIHGTFQRMSDLIGASSCF*FLILLI
Trigger: GATGAGCAAGATAAGAAAGCAGAAGCAACTGGAAGC...CCCGATGAGATCACTCATGCGCTGGAAAGTGCCGTGGATATATTTGACTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp GGCACTTTCTTCCAAAAAGCGGGCACATTTCAGATGCAAGACTTTCTTCTGGTCCGGGCACATTTCAGATaGAAGACTTTCTTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: GTFFQKAGTFQMQDFLLVRAHFR*KTFFWS
Trigger: GGACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCG...GACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCGCTTTTTGGAAGAAAGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp TTCTTTCTGCCCCTCAGATATGGAAGTGAAAAGTTGCATGTCATCTGTTGGCCTGATCAGACTCCAGCATaGAGGCAAGCCTTAGGAAGT +
Preference number: 2 (lower is better)
Translates to: FFLPLRYGSEKLHVICWPDQTPA*RQALGS
Trigger: ACTTCCTAAGGCTTGCCTGCATGCTGGAGTCTGATC...AGGCCAACAGATGACATGCAACTTTTCACTTCCATATCTGAGGGGCAGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp AAGCATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCAGTCGCAGCTCACGATaGCCGGGTAGTACATCATCA +
Preference number: 2 (lower is better)
Translates to: KHDVQADEIEKCLAEDVLSRSSR*PGSTSS
Trigger: TGATGATGTACTACCCGGGCATCGTGAGCTGCGACT...GAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp GAGGTTTACTCAGTCTGCAGAGAACCATCTGGTATTTGTTGGGATTCCGAAGAAAGCAGTTCCTTACACTaGCAGGATTCCAGAGGGATG +
Preference number: 2 (lower is better)
Translates to: EVYSVCREPSGICWDSEESSSLH*QDSRGM
Trigger: CATCCCTCTGGAATCCTGCCAGTGTAAGGAACTGCT...TTCTTCGGAATCCCAACAAATACCAGATGGTTCTCTGCAGACTGAGTAAACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp GGCACTTTCTTCCAAAAAGCGGGCACATTTCAGATGCAAGACTTTCTTCTGGTCCTTCTTCAGCCTCCTTaGCTTCAAACAAGCCATGGA +
Preference number: 2 (lower is better)
Translates to: GTFFQKAGTFQMQDFLLVLLQPP*LQTSHG
Trigger: TCCATGGCTTGTTTGAAGCCAAGGAGGCTGAAGAAG...GACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCGCTTTTTGGAAGAAAGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR CAA 90 bp ATGCTGGTTCATGAAGTGGGAGAGTCTGTTTTTCTCCACATGCATTaGGAAAGTCAGGGTGAGCAGATTGCAGGGAAACATTCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: MLVHEVGESVFLHMH*ESQGEQIAGKHSVE
Trigger: CTCAACAGAATGTTTCCCTGCAATCTGCTCACCCTGACTTTCCAAATGCATGTGGAGAAAAACAGACTCTCCCACTTCATGAACCAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp GGCACTTTCTTCCAAAAAGCGGGCACATTTCAGATGCAAGACTTTCTTCTGGTCTCAGTCTCTGCTTGTTaGAAAAGGAGAACTCTGTGG +
Preference number: 2 (lower is better)
Translates to: GTFFQKAGTFQMQDFLLVSVSAC*KRRTLW
Trigger: CCACAGAGTTCTCCTTTTTCAACAAGCAGAGACTGA...GACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCGCTTTTTGGAAGAAAGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp GATGATCTGGAAGTCATTTTGAGTTTCCAGGGAAGTGTTCATTTCCATCATCGCAAGTTAACCCTTCCTTaGGCTTCAGGGCCAAAGAGC +
Preference number: 2 (lower is better)
Translates to: DDLEVILSFQGSVHFHHRKLTLP*ASGPKS
Trigger: GCTCTTTGGCCCTGAAGCTCAAGGAAGGGTTAACTT...GCGATGATGGAAATGAACACTTCCCTGGAAACTCAAAATGACTTCCAGATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTCTCCACATGCATTTGGAAAGTCAGGGTGAGCAGATTGCAGGGAAACATTCTGAATGGTGGTAGGGAATaGAGTCTACGTTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: FSTCIWKVRVSRLQGNILNGGRE*SLRFCS
Trigger: ACTGCAGAAACGTAGACTTCATTCCCTACCACCATT...CAGAATGTTTCCCTGCAATCTGCTCACCCTGACTTTCCAAATGCATGTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCTCAGAAAGCTCCAAGGCTGATGTCACCATCCTCTTaGCAGTGTCCATATCCAAAG +
Preference number: 2 (lower is better)
Translates to: LANISPANSHVSQKAPRLMSPSS*QCPYPK
Trigger: CTTTGGATATGGACACTGTCAAGAGGATGGTGACAT...CAGCCTTGGAGCTTTCTGAGACACATGGGAATTTGCTGGAGAAATGTTGGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTCTTTCTGCCCCTCAGATATGGAAGTGAAAAGTTGCATGTCATCTGTTGGCCTGGGTATGCTGGTTCATaGAGTGGGAGAGTCTGTTTT +
Preference number: 2 (lower is better)
Translates to: FFLPLRYGSEKLHVICWPGYAGS*SGRVCF
Trigger: AAAACAGACTCTCCCACTTCATGAACCAGCATACCC...AGGCCAACAGATGACATGCAACTTTTCACTTCCATATCTGAGGGGCAGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 90 bp CCTAACAGAGTGCTTGAACATGTTATTCCAGGTCACGTTTGTCTTTaGCTCAGTCTCTGCTTGTTGAAAAAGGAGAACTCTGTGGTGGTC +
Preference number: 2 (lower is better)
Translates to: PNRVLEHVIPGHVCL*LSLCLLKKENSVVV
Trigger: GACCACCACAGAGTTCTCCTTTTTCAACAAGCAGAGACTGAGCAAAAGACAAACGTGACCTGGAATAACATGTTCAAGCACTCTGTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TGTTCTTTTGAACATCCTGAAGGGTTACCTTGCCTGATACAATTTTATCCCATGCATCTCACCAGCATCTaGTGGGAAAGGCTCATGCTG +
Preference number: 2 (lower is better)
Translates to: CSFEHPEGLPCLIQFYPMHLTSI*WERLML
Trigger: CAGCATGAGCCTTTCCCATCAGATGCTGGTGAGATG...CATGGGATAAAATTGTATCAGGCAAGGTAACCCTTCAGGATGTTCAAAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTCTTCTATTTGCTTCTGCAAGTGGAGGACTTGCCCTTCCATGTACCTAGAGATAGGATTCCAGAGGGATaGTGTCATTTGGAGACGATT +
Preference number: 2 (lower is better)
Translates to: FFYLLLQVEDLPFHVPRDRIPEG*CHLETI
Trigger: AATCGTCTCCAAATGACATCATCCCTCTGGAATCCT...ATCTCTAGGTACATGGAAGGGCAAGTCCTCCACTTGCAGAAGCAAATAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCTCAGAAAGCTCCAAGGCTGAGCCAGAATAAAGCATaGTGTCCAAGCAGACGAAAT +
Preference number: 2 (lower is better)
Translates to: LANISPANSHVSQKAPRLSQNKA*CPSRRN
Trigger: ATTTCGTCTGCTTGGACATCATGCTTTATTCTGGCT...CAGCCTTGGAGCTTTCTGAGACACATGGGAATTTGCTGGAGAAATGTTGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp CATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCTTCGGATGGCTGAGCCTATaGCTTCTACTTTGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: HDVQADEIEKCLAEDVLFGWLSL*LLLCLA
Trigger: AGCAAGACAAAGTAGAAGTCATAGGCTCAGCCATCC...GAAGAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp TTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCTCAGAAAGCTCCAAGGCTGAACAGGGCTTCCAGTTaGTTCTGCTTTCTTATCTTG +
Preference number: 2 (lower is better)
Translates to: LANISPANSHVSQKAPRLNRASS*FCFLIL
Trigger: CAAGATAAGAAAGCAGAAGCAACTGGAAGCCCTGTT...CAGCCTTGGAGCTTTCTGAGACACATGGGAATTTGCTGGAGAAATGTTGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp CATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCTTCTTGCAGGTAAAGTTGTaGCAGTTTCTTCCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: HDVQADEIEKCLAEDVLFLQVKL*QFLPWH
Trigger: GTGCCAGGGAAGAAACTGGCACAACTTTACCTGCAA...GAAGAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp TTAAATCCTTGGGATGTCACCATCCTCTTGACAGTGTCCATATCCAAAGTGTTGTGCAAGACTTTCTTCTaGTCCTTGAGCCACAGTTCG +
Preference number: 2 (lower is better)
Translates to: LNPWDVTILLTVSISKVLCKTFF*SLSHSS
Trigger: CGAACTGTGGCTCAAGGACCAGAAGAAAGTCTTGCA...CAACACTTTGGATATGGACACTGTCAAGAGGATGGTGACATCCCAAGGATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp AAGCATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCACAGTACGGATTTTGTaGACCTGGGAGCAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: KHDVQADEIEKCLAEDVLTVRIL*TWEQKS
Trigger: TGACTTCTGCTCCCAGGTCCACAAAATCCGTACTGT...GAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp AAGCATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCTCAGTCTCTGCTTGTTaGAAAAGGAGAACTCTGTGG +
Preference number: 2 (lower is better)
Translates to: KHDVQADEIEKCLAEDVLSVSAC*KRRTLW
Trigger: CCACAGAGTTCTCCTTTTTCAACAAGCAGAGACTGA...GAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp CACTTTCTTCCAAAAAGCGGGCACATTTCAGATGCAAGACTTTCTTCTGGTCCTACAAATTATTCAGCCTaGCACCACTCACAAGGTAAC +
Preference number: 2 (lower is better)
Translates to: HFLPKSGHISDARLSSGPTNYSA*HHSQGN
Trigger: GTTACCTTGTGAGTGGTGTCAGGCTGAATAATTTGT...AGGACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCGCTTTTTGGAAGAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp AAGCATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCAATGGTGGTAGGGAATaGAGTCTACGTTTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: KHDVQADEIEKCLAEDVLNGGRE*SLRFCS
Trigger: ACTGCAGAAACGTAGACTTCATTCCCTACCACCATT...GAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp GATGATCTGGAAGTCATTTTGAGTTTCCAGGGAAGTGTTCATTTCCATCATCGCTCTGCTTTCTTATCTTaGTCATCCTGGACATCTCCC +
Preference number: 2 (lower is better)
Translates to: DDLEVILSFQGSVHFHHRSAFLS*SSWTSP
Trigger: GGGAGATGTCCAGGATGAGCAAGATAAGAAAGCAGA...GCGATGATGGAAATGAACACTTCCCTGGAAACTCAAAATGACTTCCAGATCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp GGCACTTTCTTCCAAAAAGCGGGCACATTTCAGATGCAAGACTTTCTTCTGGTCATGGAAGTGAAAAGTTaGATGTCATCTGTTGGCCTA +
Preference number: 2 (lower is better)
Translates to: GTFFQKAGTFQMQDFLLVMEVKS*MSSVGL
Trigger: TAGGCCAACAGATGACATGCAACTTTTCACTTCCAT...GACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCGCTTTTTGGAAGAAAGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp GACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCTTCTGTTACAGAAAGGTCCGGGCACATTTCAGATaGAAGACTTTCTTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: DEIEKCLAEDVLFCYRKVRAHFR*KTFFWS
Trigger: GGACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCG...GACCTTTCTGTAACAGAAGAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp CATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCTTCTCTTCTATTTGCTTCTaGAAGTGGAGGACTTGCCCT +
Preference number: 2 (lower is better)
Translates to: HDVQADEIEKCLAEDVLFSSICF*KWRTCP
Trigger: AGGGCAAGTCCTCCACTTGCAGAAGCAAATAGAAGA...GAAGAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp CATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCTTCGCCTGTTCTTCTATTTaGTTCTGCAAGTGGAGGACT +
Preference number: 2 (lower is better)
Translates to: HDVQADEIEKCLAEDVLFACSSI*FCKWRT
Trigger: AGTCCTCCACTTGCAGAAGCAAATAGAAGAACAGGC...GAAGAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp TTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCTCAGAAAGCTCCAAGGCTGATTTCCATGAGTACCTaGCTTTTTCCATATCCTGGT +
Preference number: 2 (lower is better)
Translates to: LANISPANSHVSQKAPRLISMST*LFPYPG
Trigger: ACCAGGATATGGAAAAAGCCAGGTACTCATGGAAAT...CAGCCTTGGAGCTTTCTGAGACACATGGGAATTTGCTGGAGAAATGTTGGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CCA 90 bp TGTTCTTTTGAACATCCTGAAGGGTTACCTTGCCTGATACAATTTTATCCCATGAGAAGACAATCCCACTaGCAACACCGATGGAGACAG +
Preference number: 2 (lower is better)
Translates to: CSFEHPEGLPCLIQFYPMRRQSH*QHRWRQ
Trigger: CTGTCTCCATCGGTGTTGCCAGTGGGATTGTCTTCT...CATGGGATAAAATTGTATCAGGCAAGGTAACCCTTCAGGATGTTCAAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR CAA 90 bp ATGGAAGTGAAAAGTTGCATGTCATCTGTTGGCCTAACAGAGTGCTaGAACATGTTATTCCAGGTCACGTTTGTCTTTTGCTCAGTCTCT +
Preference number: 2 (lower is better)
Translates to: MEVKSCMSSVGLTEC*NMLFQVTFVFCSVS
Trigger: AGAGACTGAGCAAAAGACAAACGTGACCTGGAATAACATGTTCAAGCACTCTGTTAGGCCAACAGATGACATGCAACTTTTCACTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCTCAGAAAGCTCCAAGGCTGTACTCCGGAAGCAATTaGAAACATTTGATTCCACTA +
Preference number: 2 (lower is better)
Translates to: LANISPANSHVSQKAPRLYSGSN*KHLIPL
Trigger: TAGTGGAATCAAATGTTTTCAATTGCTTCCGGAGTA...CAGCCTTGGAGCTTTCTGAGACACATGGGAATTTGCTGGAGAAATGTTGGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp CATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCTTCAACAGGGCTTCCAGTTaGTTCTGCTTTCTTATCTTG +
Preference number: 2 (lower is better)
Translates to: HDVQADEIEKCLAEDVLFNRASS*FCFLIL
Trigger: CAAGATAAGAAAGCAGAAGCAACTGGAAGCCCTGTT...GAAGAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp TTCTTCTATTTGCTTCTGCAAGTGGAGGACTTGCCCTTCCATGTACCTAGAGATCTTTTGCTCAGTCTCTaGTTGTTGAAAAAGGAGAAC +
Preference number: 2 (lower is better)
Translates to: FFYLLLQVEDLPFHVPRDLLLSL*LLKKEN
Trigger: GTTCTCCTTTTTCAACAAGCAGAGACTGAGCAAAAG...ATCTCTAGGTACATGGAAGGGCAAGTCCTCCACTTGCAGAAGCAAATAGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 90 bp AAGGTAACAGACTTCTTTCTGCCCCTCAGATATGGAAGTGAAAAGTaGCATGTCATCTGTTGGCCTAACAGAGTGCTTGAACATGTTATT +
Preference number: 2 (lower is better)
Translates to: KVTDFFLPLRYGSEK*HVICWPNRVLEHVI
Trigger: AATAACATGTTCAAGCACTCTGTTAGGCCAACAGATGACATGCAACTTTTCACTTCCATATCTGAGGGGCAGAAAGAAGTCTGTTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp AACTTGTATTTCCTAGGGAGCTCTGACTTAGAAAAGATGGCTTCCTCTTCGTCAGATATTCGATTTCCATaGGTACCTGGCTTTTTCCAT +
Preference number: 2 (lower is better)
Translates to: NLYFLGSSDLEKMASSSSDIRFP*VPGFFH
Trigger: ATGGAAAAAGCCAGGTACTCATGGAAATCGAATATC...TGACGAAGAGGAAGCCATCTTTTCTAAGTCAGAGCTCCCTAGGAAATACAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp AAGCATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCGATATTCGATTTCCATaGGTACCTGGCTTTTTCCAT +
Preference number: 2 (lower is better)
Translates to: KHDVQADEIEKCLAEDVLDIRFP*VPGFFH
Trigger: ATGGAAAAAGCCAGGTACTCATGGAAATCGAATATC...GAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TGTTCTTTTGAACATCCTGAAGGGTTACCTTGCCTGATACAATTTTATCCCATGTTTCCTAGGGAGCTCTaGCTTAGAAAAGATGGCTTC +
Preference number: 2 (lower is better)
Translates to: CSFEHPEGLPCLIQFYPMFPREL*LRKDGF
Trigger: GAAGCCATCTTTTCTAAGTCAGAGCTCCCTAGGAAA...CATGGGATAAAATTGTATCAGGCAAGGTAACCCTTCAGGATGTTCAAAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR GCA 90 bp TCTTTTGAACATCCTGAAGGGTTACCTTGCCTGATACAATTTTATCCCATGATGGCTTCCAGTTGCTTCTaGTTTCTTATCTTGCTCATC +
Preference number: 2 (lower is better)
Translates to: SFEHPEGLPCLIQFYPMMASSCF*FLILLI
Trigger: GATGAGCAAGATAAGAAAGCAGAAGCAACTGGAAGC...CATCATGGGATAAAATTGTATCAGGCAAGGTAACCCTTCAGGATGTTCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR TCA 90 bp TGTTCTTTTGAACATCCTGAAGGGTTACCTTGCCTGATACAATTTTATCCCATGGTCTTGACTCTATTTTaGAGATTGGTCTGTCGTTCT +
Preference number: 2 (lower is better)
Translates to: CSFEHPEGLPCLIQFYPMVLTLF*RLVCRS
Trigger: AGAACGACAGACCAATCTTCAAAATAGAGTCAAGAC...CATGGGATAAAATTGTATCAGGCAAGGTAACCCTTCAGGATGTTCAAAAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp GCCATGATCTCAATGGCCTCGCCTTTCAGGGGGAGGTTCAGGAGCTGCTCCATGTTCCTCAGCATCTTCTaGGCGAGGACCATCTGCCCC +
Preference number: 3 (lower is better)
Translates to: AMISMASPFRGRFRSCSMFLSIF*ARTICP
Trigger: GGGGCAGATGGTCCTCGCCAAGAAGATGCTGAGGAA...CATGGAGCAGCTCCTGAACCTCCCCCTGAAAGGCGAGGCCATTGAGATCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp GTTCCTAGGTTTGGCCCAGAAGGGTCTGTGGGAACCTaGGCATGCTGGCGGTGCAGAGAGGGCAATAACAGA +
Preference number: 3 (lower is better)
Translates to: VPRFGPEGSVGT*ACWRCREGNNR
Trigger: TCTGTTATTGCCCTCTCTGCACCGCCAGCATGCCCAGGTTCCCACAGACCCTTCTGGGCCAAACCTAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR TCA 72 bp CCAGGGCTCCCCCTGAGGAAGGTCACTATTGCTTACTaGACTCTGCTTCTGCTGGGGCTGCAAGTCACTGCT +
Preference number: 3 (lower is better)
Translates to: PGLPLRKVTIAY*TLLLLGLQVTA
Trigger: AGCAGTGACTTGCAGCCCCAGCAGAAGCAGAGTTCAGTAAGCAATAGTGACCTTCCTCAGGGGGAGCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR GCA 72 bp CAGCAAGGAGAAGCAGGAAGCTTGCAGGTAAAGTTGTaGCAGTTTCTTCCCTGGCACCGAGCCCTCCTGGGT +
Preference number: 3 (lower is better)
Translates to: QQGEAGSLQVKL*QFLPWHRALLG
Trigger: ACCCAGGAGGGCTCGGTGCCAGGGAAGAAACTGGCACAACTTTACCTGCAAGCTTCCTGCTTCTCCTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 72 bp CCAGAAGGGTCTGTGGGAACCTGGGCATGCTGGCGGTaGAGAGAGGGCAATAACAGATCATGGGAAGACAGT +
Preference number: 3 (lower is better)
Translates to: PEGSVGTWACWR*REGNNRSWEDS
Trigger: ACTGTCTTCCCATGATCTGTTATTGCCCTCTCTGCACCGCCAGCATGCCCAGGTTCCCACAGACCCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR GCA 72 bp CTCCAACCCAGGGCTCCCCCTGAGGAAGGTCACTATTaGTTACTGAACTCTGCTTCTGCTGGGGCTGCAAGT +
Preference number: 3 (lower is better)
Translates to: LQPRAPPEEGHY*LLNSASAGAAS
Trigger: ACTTGCAGCCCCAGCAGAAGCAGAGTTCAGTAAGCAATAGTGACCTTCCTCAGGGGGAGCCCTGGGTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR GCA 72 bp AAAGCCAGACCATCCGAACATGACCTCTGCCCACTATaGTGCTCACACACACACATACACCCCTGGAGCCCC +
Preference number: 3 (lower is better)
Translates to: KARPSEHDLCPL*CSHTHIHPWSP
Trigger: GGGGCTCCAGGGGTGTATGTGTGTGTGTGAGCAGCATAGTGGGCAGAGGTCATGTTCGGATGGTCTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR CCA 72 bp TTTGGCCCAGAAGGGTCTGTGGGAACCTGGGCATGCTaGCGGTGCAGAGAGGGCAATAACAGATCATGGGAA +
Preference number: 3 (lower is better)
Translates to: FGPEGSVGTWAC*RCREGNNRSWE
Trigger: TTCCCATGATCTGTTATTGCCCTCTCTGCACCGCCAGCATGCCCAGGTTCCCACAGACCCTTCTGGGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR-3UTR CAA 90 bp TGGGCCGAGCCCCACAGGTCAAGCAAACAGCCAGGGGAGGTAAAGGCAGCTGTGCTCAGTCTCTGCTTGTaGAAAAAGGAGAACTCTGTG +
Preference number: 3 (lower is better)
Translates to: WAEPHRSSKQPGEVKAAVLSLCL*KKENSV
Trigger: CACAGAGTTCTCCTTTTTCAACAAGCAGAGACTGAG...CACAGCTGCCTTTACCTCCCCTGGCTGTTTGCTTGACCTGTGGGGCTCGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR GCA 72 bp GCCACAGTTCGTAGGCTGTCTTCTGCATTATGGGTCTaGAGAACCGAAGGATCCGGCACTCAACCACCTCTC +
Preference number: 3 (lower is better)
Translates to: ATVRRLSSALWV*RTEGSGTQPPL
Trigger: GAGAGGTGGTTGAGTGCCGGATCCTTCGGTTCTGCAGACCCATAATGCAGAAGACAGCCTACGAACTGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 72 bp GCCAGTTTCTTCCCTGGCACCGAGCCCTCCTGGGTATaGTGGTTCATGAAGTGGGAGAGTCTGTTTTTCTCC +
Preference number: 3 (lower is better)
Translates to: ASFFPGTEPSWV*WFMKWESLFFS
Trigger: GGAGAAAAACAGACTCTCCCACTTCATGAACCAGCATACCCAGGAGGGCTCGGTGCCAGGGAAGAAACTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 72 bp TTACTGAACTCTGCTTCTGCTGGGGCTGCAAGTCACTaGTCAATCCCTTGCTCAGGGACACCAGAACCCCTC +
Preference number: 3 (lower is better)
Translates to: LLNSASAGAASH*SIPCSGTPEPL
Trigger: GAGGGGTTCTGGTGTCCCTGAGCAAGGGATTGAGCAGTGACTTGCAGCCCCAGCAGAAGCAGAGTTCAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR-3UTR CAA 90 bp TGGGCCGAGCCCCACAGGTCAAGCAAACAGCCAGGGGAGGTAAAGGCAGCTGTGCGTCTTGACTCTATTTaGAAGATTGGTCTGTCGTTC +
Preference number: 3 (lower is better)
Translates to: WAEPHRSSKQPGEVKAAVRLDSI*KIGLSF
Trigger: GAACGACAGACCAATCTTCAAAATAGAGTCAAGACG...CACAGCTGCCTTTACCTCCCCTGGCTGTTTGCTTGACCTGTGGGGCTCGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR TCA 72 bp GTCTCCAAGGCCTTGAGTATCTCCACCCCACTGTCCTaGGCGTTCTCGGCCTGTTCTTCTATTTGCTTCTGC +
Preference number: 3 (lower is better)
Translates to: VSKALSISTPLS*AFSACSSICFC
Trigger: GCAGAAGCAAATAGAAGAACAGGCCGAGAACGCTCAGGACAGTGGGGTGGAGATACTCAAGGCCTTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 72 bp TCCTGCCGCTACTGCAAAAGCCAGACCATCCGAACATaGCCTCTGCCCACTATGCTGCTCACACACACACAT +
Preference number: 3 (lower is better)
Translates to: SCRYCKSQTIRT*PLPTMLLTHTH
Trigger: ATGTGTGTGTGTGAGCAGCATAGTGGGCAGAGGTCATGTTCGGATGGTCTGGCTTTTGCAGTAGCGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR CCA 72 bp AGTTGTGCCAGTTTCTTCCCTGGCACCGAGCCCTCCTaGGTATGCTGGTTCATGAAGTGGGAGAGTCTGTTT +
Preference number: 3 (lower is better)
Translates to: SCASFFPGTEPS*VCWFMKWESLF
Trigger: AAACAGACTCTCCCACTTCATGAACCAGCATACCCAGGAGGGCTCGGTGCCAGGGAAGAAACTGGCACAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp GGAAGCTTGCAGGTAAAGTTGTGCCAGTTTCTTCCCTaGCACCGAGCCCTCCTGGGTATGCTGGTTCATGAA +
Preference number: 3 (lower is better)
Translates to: GSLQVKLCQFLP*HRALLGMLVHE
Trigger: TTCATGAACCAGCATACCCAGGAGGGCTCGGTGCCAGGGAAGAAACTGGCACAACTTTACCTGCAAGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp CGATCCCACAGAAGACAATCCCACTGGCAACACCGATaGAGACAGTACGGATTTTGTGGACCTGGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: RSHRRQSHWQHR*RQYGFCGPGSR
Trigger: TCTGCTCCCAGGTCCACAAAATCCGTACTGTCTCCATCGGTGTTGCCAGTGGGATTGTCTTCTGTGGGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp GCCATGATCTCAATGGCCTCGCCTTTCAGGGGGAGGTTCAGGAGCTGCTCCATGTATTCCAGGTCACGTTaGTCTTTTGCTCAGTCTCTG +
Preference number: 3 (lower is better)
Translates to: AMISMASPFRGRFRSCSMYSRSR*SFAQSL
Trigger: CAGAGACTGAGCAAAAGACAAACGTGACCTGGAATA...CATGGAGCAGCTCCTGAACCTCCCCCTGAAAGGCGAGGCCATTGAGATCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp GTCCCACTCTTGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAGCTGCAAGTGGAGGACTaGCCCTTCCATGTACCTAGA +
Preference number: 3 (lower is better)
Translates to: VPLLKSGIPDSDAGVKSQLQVED*PFHVPR
Trigger: TCTAGGTACATGGAAGGGCAAGTCCTCCACTTGCAG...CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 72 bp TCCCTGGCACCGAGCCCTCCTGGGTATGCTGGTTCATaGAGTGGGAGAGTCTGTTTTTCTCCACATGCATTT +
Preference number: 3 (lower is better)
Translates to: SLAPSPPGYAGS*SGRVCFSPHAF
Trigger: AAATGCATGTGGAGAAAAACAGACTCTCCCACTTCATGAACCAGCATACCCAGGAGGGCTCGGTGCCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 72 bp CAGCGCATCTCACCAGCATCTGATGGGAAAGGCTCATaGTGTCCAGCTGGACCAGAGATATCTCTTTTAGCG +
Preference number: 3 (lower is better)
Translates to: QRISPASDGKGS*CPAGPEISLLA
Trigger: CGCTAAAAGAGATATCTCTGGTCCAGCTGGACAGCATGAGCCTTTCCCATCAGATGCTGGTGAGATGCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 72 bp TCACTATTGCTTACTGAACTCTGCTTCTGCTGGGGCTaGAAGTCACTGCTCAATCCCTTGCTCAGGGACACC +
Preference number: 3 (lower is better)
Translates to: SLLLTELCFCWG*KSLLNPLLRDT
Trigger: GGTGTCCCTGAGCAAGGGATTGAGCAGTGACTTGCAGCCCCAGCAGAAGCAGAGTTCAGTAAGCAATAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR CCA 72 bp GGAAGGTCACTATTGCTTACTGAACTCTGCTTCTGCTaGGGCTGCAAGTCACTGCTCAATCCCTTGCTCAGG +
Preference number: 3 (lower is better)
Translates to: GRSLLLTELCFC*GCKSLLNPLLR
Trigger: CCTGAGCAAGGGATTGAGCAGTGACTTGCAGCCCCAGCAGAAGCAGAGTTCAGTAAGCAATAGTGACCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR-3UTR CAA 90 bp TCCGAACATGACCTCTGCCCACTATGCTGCTCACACACACACATACACCCCTGGTTCTGCTTTCTTATCTaGCTCATCCTGGACATCTCC +
Preference number: 3 (lower is better)
Translates to: SEHDLCPLCCSHTHIHPWFCFLI*LILDIS
Trigger: GGAGATGTCCAGGATGAGCAAGATAAGAAAGCAGAA...CCAGGGGTGTATGTGTGTGTGTGAGCAGCATAGTGGGCAGAGGTCATGTTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR-3UTR CAA 90 bp CTCAATGGCCTCGCCTTTCAGGGGGAGGTTCAGGAGCTGCTCCATGACCAGTATTATGGAAGTGAAAAGTaGCATGTCATCTGTTGGCCT +
Preference number: 3 (lower is better)
Translates to: LNGLAFQGEVQELLHDQYYGSEK*HVICWP
Trigger: AGGCCAACAGATGACATGCAACTTTTCACTTCCATA...ATACTGGTCATGGAGCAGCTCCTGAACCTCCCCCTGAAAGGCGAGGCCATTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp ACAGTAATACGGAATCCCGCAGCTTCCCTCTACCAGGTACGAGTCGAGCTCTCTAGATTCTCGGGGAACTaGTATTTCCTAGGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: TVIRNPAASLYQVRVELSRFSGN*YFLGSS
Trigger: AGAGCTCCCTAGGAAATACAAGTTCCCCGAGAATCT...AGAGAGCTCGACTCGTACCTGGTAGAGGGAAGCTGCGGGATTCCGTATTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp GCACTCAACCACCTCTCCTTCCATCTCACGGAGCTCCTCCTCTTCGCCGTAAGTGATCTGGAAGTCATTTaGAGTTTCCAGGGAAGTGTT +
Preference number: 3 (lower is better)
Translates to: ALNHLSFHLTELLLFAVSDLEVI*SFQGSV
Trigger: AACACTTCCCTGGAAACTCAAAATGACTTCCAGATC...ACTTACGGCGAAGAGGAGGAGCTCCGTGAGATGGAAGGAGAGGTGGTTGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp GTCCCACTCTTGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAGGAGTACCACCATTCCTaGCTCATGCTTAGCCAACAT +
Preference number: 3 (lower is better)
Translates to: VPLLKSGIPDSDAGVKSQEYHHS*LMLSQH
Trigger: ATGTTGGCTAAGCATGAGCAAGGAATGGTGGTACTC...CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 72 bp TGTCCCGGATTTCCTGAGGCTGCATGGTACCAAGCGTaGTGTAGGTGGTGTTCCGGTTCTTCATTATGGCAT +
Preference number: 3 (lower is better)
Translates to: CPGFPEAAWYQA*CRWCSGSSLWH
Trigger: ATGCCATAATGAAGAACCGGAACACCACCTACATCACGCTTGGTACCATGCAGCCTCAGGAAATCCGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 72 bp GGAGCTCCTCCTCTTCGCCGTAAGTTAACCCTTCCTTaGGCTTCAGGGCCAAAGAGCGATAATGAACCTCAA +
Preference number: 3 (lower is better)
Translates to: GAPPLRRKLTLP*ASGPKSDNEPQ
Trigger: TTGAGGTTCATTATCGCTCTTTGGCCCTGAAGCTCAAGGAAGGGTTAACTTACGGCGAAGAGGAGGAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 72 bp TCTGAACATTTTCCTGCTCCAACCCAGGGCTCCCCCTaGGGAAGGTCACTATTGCTTACTGAACTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: SEHFPAPTQGSP*GRSLLLTELCF
Trigger: GAAGCAGAGTTCAGTAAGCAATAGTGACCTTCCTCAGGGGGAGCCCTGGGTTGGAGCAGGAAAATGTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR TCA 72 bp CAGAAGTCAAATATATCCACGGCACTTTCCAGCGCATaGGTGATCTCATCGGGAGCCTTTTCCCCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: QKSNISTALSSA*VISSGAFSPGK
Trigger: CTTCCCTGGGGAAAAGGCTCCCGATGAGATCACTCATGCGCTGGAAAGTGCCGTGGATATATTTGACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR GCA 72 bp TCAATGGCCTCGCCTTTCAGGGGGAGGTTCAGGAGCTaGTCCATGACCAGTATTTCATATTTGAACCACACG +
Preference number: 3 (lower is better)
Translates to: SMASPFRGRFRS*SMTSISYLNHT
Trigger: CGTGTGGTTCAAATATGAAATACTGGTCATGGAGCAGCTCCTGAACCTCCCCCTGAAAGGCGAGGCCATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp CAGTGTGTCCAACGATCCCACAGAAGACAATCCCACTaGCAACACCGATGGAGACAGTACGGATTTTGTGGA +
Preference number: 3 (lower is better)
Translates to: QCVQRSHRRQSH*QHRWRQYGFCG
Trigger: TCCACAAAATCCGTACTGTCTCCATCGGTGTTGCCAGTGGGATTGTCTTCTGTGGGATCGTTGGACACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGACCTCGACAGAGGCTaGACATTTGCAATCCTGTGC +
Preference number: 3 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLDLDRG*TFAILC
Trigger: GCACAGGATTGCAAATGTCAAGCCTCTGTCGAGGTC...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
3UTR-3UTR CAA 90 bp ATGGGCATAGAGCGGATGAGCTTCTCTATGAAGGCCCAGGAGGTTCCATCCACAGATGTCACCATCCTCTaGACAGTGTCCATATCCAAA +
Preference number: 3 (lower is better)
Translates to: MGIERMSFSMKAQEVPSTDVTIL*TVSISK
Trigger: TTTGGATATGGACACTGTCAAGAGGATGGTGACATC...TGTGGATGGAACCTCCTGGGCCTTCATAGAGAAGCTCATCCGCTCTATGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp TCCAGGCATCTGTTCCTAGGTTTGGCCCAGAAGGGTCTGTGGGAACCTGGGCATAACTTGAGGATTCTGTaGTCTTCATTGTGGTGTATG +
Preference number: 3 (lower is better)
Translates to: SRHLFLGLAQKGLWEPGHNLRIL*SSLWCM
Trigger: CATACACCACAATGAAGACAACAGAATCCTCAAGTT...ATGCCCAGGTTCCCACAGACCCTTCTGGGCCAAACCTAGGAACAGATGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR TCA 72 bp CTTCTAAGGCTACGAAATGTTGGGCCAGAGGCAGGATaGCAATCTGGAGCAGTTCCTTACACTGGCAGGATT +
Preference number: 3 (lower is better)
Translates to: LLRLRNVGPEAG*QSGAVPYTGRI
Trigger: AATCCTGCCAGTGTAAGGAACTGCTCCAGATTGTCATCCTGCCTCTGGCCCAACATTTCGTAGCCTTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 72 bp GTCAGTGCAATAGCAACAGCCCTGTGGTTCTCATGCTaGGAGGCCAGATATTCGATTTCCATGAGTACCTGG +
Preference number: 3 (lower is better)
Translates to: VSAIATALWFSC*EARYSISMSTW
Trigger: CCAGGTACTCATGGAAATCGAATATCTGGCCTCTCAGCATGAGAACCACAGGGCTGTTGCTATTGCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR CCA 72 bp AGAGGCAGGATGACAATCTGGAGCAGTTCCTTACACTaGCAGGATTCCAGAGGGATGATGTCATTTGGAGAC +
Preference number: 3 (lower is better)
Translates to: RGRMTIWSSSLH*QDSRGMMSFGD
Trigger: GTCTCCAAATGACATCATCCCTCTGGAATCCTGCCAGTGTAAGGAACTGCTCCAGATTGTCATCCTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp TATTTGTTGGGATTCCGAAGAAGTGACCACATCCTGTaGGCTCGAGAGCCTAACTCAATGGCCAAGTCCAGA +
Preference number: 3 (lower is better)
Translates to: YLLGFRRSDHIL*AREPNSMAKSR
Trigger: TCTGGACTTGGCCATTGAGTTAGGCTCTCGAGCCCACAGGATGTGGTCACTTCTTCGGAATCCCAACAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp GCAACACCGATGGAGACAGTACGGATTTTGTGGACCTaGGAGCAGAAGTCAAATATATCCACGGCACTTTCC +
Preference number: 3 (lower is better)
Translates to: ATPMETVRILWT*EQKSNISTALS
Trigger: GGAAAGTGCCGTGGATATATTTGACTTCTGCTCCCAGGTCCACAAAATCCGTACTGTCTCCATCGGTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp CCACAGCAAGGAGAAGCAGGAAGCTTGCAGGTAAAGTTGTGCCAGTTTCTTCCCCTCAGTCTCTGCTTGTaGAAAAAGGAGAACTCTGTG +
Preference number: 3 (lower is better)
Translates to: PQQGEAGSLQVKLCQFLPLSLCL*KKENSV
Trigger: CACAGAGTTCTCCTTTTTCAACAAGCAGAGACTGAG...GGGAAGAAACTGGCACAACTTTACCTGCAAGCTTCCTGCTTCTCCTTGCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp TTAGCCAACATTTCTCCAGCAAATTCCCATGTGTCTCAGAAAGCTCCAAGGCTGCCTTCTTCAGCCTCCTaGGCTTCAAACAAGCCATGG +
Preference number: 3 (lower is better)
Translates to: LANISPANSHVSQKAPRLPSSAS*ASNKPW
Trigger: CCATGGCTTGTTTGAAGCCAAGGAGGCTGAAGAAGG...CAGCCTTGGAGCTTTCTGAGACACATGGGAATTTGCTGGAGAAATGTTGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR GCA 72 bp CTCCTGTTAACTCGGAGGCTGAGTACCACCATTCCTTaGTCATGCTTAGCCAACATTTCTCCAGCAAATTCC +
Preference number: 3 (lower is better)
Translates to: LLLTRRLSTTIP*SCLANISPANS
Trigger: GGAATTTGCTGGAGAAATGTTGGCTAAGCATGAGCAAGGAATGGTGGTACTCAGCCTCCGAGTTAACAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp CTTCCAGTTGCTTCTGCTTTCTTATCTTGCTCATCCTaGACATCTCCCGGGAAACAGGGAACTGAACATGGA +
Preference number: 3 (lower is better)
Translates to: LPVASAFLSCSS*TSPGKQGTEHG
Trigger: TCCATGTTCAGTTCCCTGTTTCCCGGGAGATGTCCAGGATGAGCAAGATAAGAAAGCAGAAGCAACTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp GGAATGAAGTCTACGTTTCTGCAGTGGTTGCACCGATaGGCACTTTCTTCCAAAAAGCGGGCACATTTCAGA +
Preference number: 3 (lower is better)
Translates to: GMKSTFLQWLHR*ALSSKKRAHFR
Trigger: TCTGAAATGTGCCCGCTTTTTGGAAGAAAGTGCCCATCGGTGCAACCACTGCAGAAACGTAGACTTCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp GTTTACTCAGTCTGCAGAGAACCATCTGGTATTTGTTaGGATTCCGAAGAAGTGACCACATCCTGTGGGCTC +
Preference number: 3 (lower is better)
Translates to: VYSVCREPSGIC*DSEEVTTSCGL
Trigger: GAGCCCACAGGATGTGGTCACTTCTTCGGAATCCCAACAAATACCAGATGGTTCTCTGCAGACTGAGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp ATGACAATCTGGAGCAGTTCCTTACACTGGCAGGATTCCAGAGGGATGATGTCAGGTCACGTTTGTCTTTaGCTCAGTCTCTGCTTGTTG +
Preference number: 3 (lower is better)
Translates to: MTIWSSSLHWQDSRGMMSGHVCL*LSLCLL
Trigger: CAACAAGCAGAGACTGAGCAAAAGACAAACGTGACC...TGACATCATCCCTCTGGAATCCTGCCAGTGTAAGGAACTGCTCCAGATTGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp ACAGTAATACGGAATCCCGCAGCTTCCCTCTACCAGGTACGAGTCGAGCTCTCTCTACTCCGGAAGCAATaGAAAACATTTGATTCCACT +
Preference number: 3 (lower is better)
Translates to: TVIRNPAASLYQVRVELSLLRKQ*KTFDST
Trigger: AGTGGAATCAAATGTTTTCAATTGCTTCCGGAGTAG...AGAGAGCTCGACTCGTACCTGGTAGAGGGAAGCTGCGGGATTCCGTATTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp GATGTCCTCTTCTGTTACAGAAAGGTCCCACAACCATCCCAGCACCTGGACCAACAGGTACTTGTTCTTTaGAACATCCTGAAGGGTTAC +
Preference number: 3 (lower is better)
Translates to: DVLFCYRKVPQPSQHLDQQVLVL*NILKGY
Trigger: GTAACCCTTCAGGATGTTCAAAAGAACAAGTACCTG...TTGGTCCAGGTGCTGGGATGGTTGTGGGACCTTTCTGTAACAGAAGAGGACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp TTCCTCAGCATCTTCTTGGCGAGGACCATCTGCCCCATGTTAAAACAGACCTCATATGGAAGTGAAAAGTaGCATGTCATCTGTTGGCCT +
Preference number: 3 (lower is better)
Translates to: FLSIFLARTICPMLKQTSYGSEK*HVICWP
Trigger: AGGCCAACAGATGACATGCAACTTTTCACTTCCATA...TGAGGTCTGTTTTAACATGGGGCAGATGGTCCTCGCCAAGAAGATGCTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 72 bp AATCATGCTCCGATCACAGAGCTGCCAGCAGTTTGGTaGCAAAATAACGTCGTTCATCTGAGCCATGTTCTG +
Preference number: 3 (lower is better)
Translates to: NHAPITELPAVW*QNNVVHLSHVL
Trigger: CAGAACATGGCTCAGATGAACGACGTTATTTTGTCACCAAACTGCTGGCAGCTCTGTGATCGGAGCATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR GCA 72 bp TTAACTCGGAGGCTGAGTACCACCATTCCTTGCTCATaGTTAGCCAACATTTCTCCAGCAAATTCCCATGTG +
Preference number: 3 (lower is better)
Translates to: LTRRLSTTIPCS*LANISPANSHV
Trigger: CACATGGGAATTTGCTGGAGAAATGTTGGCTAAGCATGAGCAAGGAATGGTGGTACTCAGCCTCCGAGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 72 bp ATTGAGGCCCAAACACTGATACACGGGTCCAGGATCTaGAACTCCTTTCATAACTTTCTTCGGAAGCTCCTT +
Preference number: 3 (lower is better)
Translates to: IEAQTLIHGSRI*NSFHNFLRKLL
Trigger: AAGGAGCTTCCGAAGAAAGTTATGAAAGGAGTTGCAGATCCTGGACCCGTGTATCAGTGTTTGGGCCTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR CCA 72 bp AAGGCTTTGTTGTTTTCTTCTAAGGCTACGAAATGTTaGGCCAGAGGCAGGATGACAATCTGGAGCAGTTCC +
Preference number: 3 (lower is better)
Translates to: KALLFSSKATKC*ARGRMTIWSSS
Trigger: GGAACTGCTCCAGATTGTCATCCTGCCTCTGGCCCAACATTTCGTAGCCTTAGAAGAAAACAACAAAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp GAGGTTTACTCAGTCTGCAGAGAACCATCTGGTATTTGTTGGGATTCCGAAGAAAGTTCACAAACACAATaGTCACAGGGCGAAGCTCAG +
Preference number: 3 (lower is better)
Translates to: EVYSVCREPSGICWDSEESSQTQ*SQGEAQ
Trigger: CTGAGCTTCGCCCTGTGACAATTGTGTTTGTGAACT...TTCTTCGGAATCCCAACAAATACCAGATGGTTCTCTGCAGACTGAGTAAACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR TCA 72 bp CTTTTAGCGATGCTGGAGGTGACAAATTATTCAGCCTaGCACCACTCACAAGGTAACAGACTTCTTTCTGCC +
Preference number: 3 (lower is better)
Translates to: LLAMLEVTNYSA*HHSQGNRLLSA
Trigger: GGCAGAAAGAAGTCTGTTACCTTGTGAGTGGTGTCAGGCTGAATAATTTGTCACCTCCAGCATCGCTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 72 bp GTTATTCCAGGTCACGTTTGTCTTTTGCTCAGTCTCTaGTTGTTGAAAAAGGAGAACTCTGTGGTGGTCGAG +
Preference number: 3 (lower is better)
Translates to: VIPGHVCLLLSL*LLKKENSVVVE
Trigger: CTCGACCACCACAGAGTTCTCCTTTTTCAACAAGCAGAGACTGAGCAAAAGACAAACGTGACCTGGAATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp TTCTTCTATTTGCTTCTGCAAGTGGAGGACTTGCCCTTCCATGTACCTAGAGATTATTCCAGGTCACGTTaGTCTTTTGCTCAGTCTCTG +
Preference number: 3 (lower is better)
Translates to: FFYLLLQVEDLPFHVPRDYSRSR*SFAQSL
Trigger: CAGAGACTGAGCAAAAGACAAACGTGACCTGGAATA...ATCTCTAGGTACATGGAAGGGCAAGTCCTCCACTTGCAGAAGCAAATAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp CATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCTTCGGCCTAACAGAGTGCTaGAACATGTTATTCCAGGTC +
Preference number: 3 (lower is better)
Translates to: HDVQADEIEKCLAEDVLFGLTEC*NMLFQV
Trigger: GACCTGGAATAACATGTTCAAGCACTCTGTTAGGCC...GAAGAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR GCA 72 bp ATCCTCTCAATTTCAATCATGCTCCGATCACAGAGCTaGCAGCAGTTTGGTGACAAAATAACGTCGTTCATC +
Preference number: 3 (lower is better)
Translates to: ILSISIMLRSQS*QQFGDKITSFI
Trigger: GATGAACGACGTTATTTTGTCACCAAACTGCTGGCAGCTCTGTGATCGGAGCATGATTGAAATTGAGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR GCA 72 bp CAAAGGGTAGCCCTCATATCTGTTGCAGATGAGATATaGCATACCAAACATGACTTTCTCATTGAGGCCCAA +
Preference number: 3 (lower is better)
Translates to: QRVALISVADEI*HTKHDFLIEAQ
Trigger: TTGGGCCTCAATGAGAAAGTCATGTTTGGTATGGCATATCTCATCTGCAACAGATATGAGGGCTACCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp CACTTTCTTCCAAAAAGCGGGCACATTTCAGATGCAAGACTTTCTTCTGGTCCTCGTCTTGACTCTATTTaGAAGATTGGTCTGTCGTTC +
Preference number: 3 (lower is better)
Translates to: HFLPKSGHISDARLSSGPRLDSI*KIGLSF
Trigger: GAACGACAGACCAATCTTCAAAATAGAGTCAAGACG...AGGACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCGCTTTTTGGAAGAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR TCA 72 bp GAGATTCTCGGGGAACTTGTATTTCCTAGGGAGCTCTaGCTTAGAAAAGATGGCTTCCTCTTCGTCAATTTT +
Preference number: 3 (lower is better)
Translates to: EILGELVFPREL*LRKDGFLFVNF
Trigger: AAAATTGACGAAGAGGAAGCCATCTTTTCTAAGTCAGAGCTCCCTAGGAAATACAAGTTCCCCGAGAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp GAAAAGATGGCTTCCTCTTCGTCAATTTTAAATCCTTaGGATGTCACCATCCTCTTGACAGTGTCCATATCC +
Preference number: 3 (lower is better)
Translates to: EKMASSSSILNP*DVTILLTVSIS
Trigger: GGATATGGACACTGTCAAGAGGATGGTGACATCCCAAGGATTTAAAATTGACGAAGAGGAAGCCATCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp AAGAAAAGAGGTTTACTCAGTCTGCAGAGAACCATCTaGTATTTGTTGGGATTCCGAAGAAGTGACCACATC +
Preference number: 3 (lower is better)
Translates to: KKRGLLSLQRTI*YLLGFRRSDHI
Trigger: GATGTGGTCACTTCTTCGGAATCCCAACAAATACCAGATGGTTCTCTGCAGACTGAGTAAACCTCTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp TTAAATCCTTGGGATGTCACCATCCTCTTGACAGTGTCCATATCCAAAGTGTTGAAACAGGGCTTCCAGTaGCTTCTGCTTTCTTATCTT +
Preference number: 3 (lower is better)
Translates to: LNPWDVTILLTVSISKVLKQGFQ*LLLSYL
Trigger: AAGATAAGAAAGCAGAAGCAACTGGAAGCCCTGTTT...CAACACTTTGGATATGGACACTGTCAAGAGGATGGTGACATCCCAAGGATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp TCTTTTGAACATCCTGAAGGGTTACCTTGCCTGATACAATTTTATCCCATGATGGGTCACGTTTGTCTTTaGCTCAGTCTCTGCTTGTTG +
Preference number: 3 (lower is better)
Translates to: SFEHPEGLPCLIQFYPMMGHVCL*LSLCLL
Trigger: CAACAAGCAGAGACTGAGCAAAAGACAAACGTGACC...CATCATGGGATAAAATTGTATCAGGCAAGGTAACCCTTCAGGATGTTCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp TGTTCTTTTGAACATCCTGAAGGGTTACCTTGCCTGATACAATTTTATCCCATGAACATGAAGACCTTATaGATCTGGCCTCGGAAGACC +
Preference number: 3 (lower is better)
Translates to: CSFEHPEGLPCLIQFYPMNMKTL*IWPRKT
Trigger: GGTCTTCCGAGGCCAGATCAATAAGGTCTTCATGTT...CATGGGATAAAATTGTATCAGGCAAGGTAACCCTTCAGGATGTTCAAAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
3UTR GCA 72 bp GTGAAAAGTTGCATGTCATCTGTTGGCCTAACAGAGTaGTTGAACATGTTATTCCAGGTCACGTTTGTCTTT +
Preference number: 3 (lower is better)
Translates to: VKSCMSSVGLTE*LNMLFQVTFVF
Trigger: AAAGACAAACGTGACCTGGAATAACATGTTCAAGCACTCTGTTAGGCCAACAGATGACATGCAACTTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp CTCAGATATGGAAGTGAAAAGTTGCATGTCATCTGTTaGCCTAACAGAGTGCTTGAACATGTTATTCCAGGT +
Preference number: 3 (lower is better)
Translates to: LRYGSEKLHVIC*PNRVLEHVIPG
Trigger: ACCTGGAATAACATGTTCAAGCACTCTGTTAGGCCAACAGATGACATGCAACTTTTCACTTCCATATCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CCA 72 bp TCTGTTACAGAAAGGTCCCACAACCATCCCAGCACCTaGACCAAATGTTTATATCTGCTTTTCAAGAAAAGA +
Preference number: 3 (lower is better)
Translates to: SVTERSHNHPST*TKCLYLLFKKR
Trigger: TCTTTTCTTGAAAAGCAGATATAAACATTTGGTCCAGGTGCTGGGATGGTTGTGGGACCTTTCTGTAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR-3UTR CAA 90 bp CATGATGTCCAAGCAGACGAAATAGAAAAATGCCTTGCTGAAGATGTCCTCTTCATTCTGTTGTCTTCATaGTGGTGTATGAATTCCAAG +
Preference number: 3 (lower is better)
Translates to: HDVQADEIEKCLAEDVLFILLSS*WCMNSK
Trigger: CTTGGAATTCATACACCACAATGAAGACAACAGAAT...GAAGAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTCTGCTTGGACATCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp GTGAGGTGCCTGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTGGGCCGGTGGTATTTTaGGCCACAAGGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VRCLWGTTMAPEAGTDNFGPVVF*ATRVSK
Trigger: CTTGGAGACCCTTGTGGCTCAAAATACCACCGGCCC...AAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACAGGCACCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GTGAGGTGCCTGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTGGGTGGCCAGGGCCTTaGTCATCATCTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: VRCLWGTTMAPEAGTDNFGWPGP*SSSSCS
Trigger: GGAACATGAAGATGATGATCAAGGCCCTGGCCACCC...AAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACAGGCACCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GACAGCGATGCAGGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATCAAAGACCAACATGGTaGTGTGGCCAGCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: DSDAGVKSQEESALELEDQRPTW*CGQQPA
Trigger: GGCTGGCTGCTGGCCACATCACCATGTTGGTCTTTG...ATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCCTGCATCGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000193149.2
3UTR CAA 72 bp GTAGAGCCTCGGGTAGAAGACGGGGCCGGTGGTATTTaGAGCCACAAGGGTCTCCAAGGCCTTGAGTATCTC +
Preference number: 4 (lower is better)
Translates to: VEPRVEDGAGGI*SHKGLQGLEYL
Trigger: GAGATACTCAAGGCCTTGGAGACCCTTGTGGCTCAAAATACCACCGGCCCCGTCTTCTACCCGAGGCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp GCAGGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCCAAAGACCAACATGGTaGTGTGGCCAGCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGVKSQEESALELEDSVVQRPTW*CGQQPA
Trigger: GGCTGGCTGCTGGCCACATCACCATGTTGGTCTTTG...GACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000193149.2
CDS-3UTR TCA 90 bp GCAGGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCTGCTGCCATCGTAGGTaGCAGAGTCGCAGCTCACGA +
Preference number: 4 (lower is better)
Translates to: AGVKSQEESALELEDSVVCCHRR*QSRSSR
Trigger: TCGTGAGCTGCGACTCTGTCACCTACGATGGCAGCA...GACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR GCA 90 bp GTGAGGTGCCTGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTCGGGCACATTTCAGATaGAAGACTTTCTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VRCLWGTTMAPEAGTDNFRAHFR*KTFFWS
Trigger: GGACCAGAAGAAAGTCTTGCATCTGAAATGTGCCCG...AAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACAGGCACCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp GACAGCGATGCAGGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATACCAACATGGTGATGTaGCCAGCAGCCAGCCCTATC +
Preference number: 4 (lower is better)
Translates to: DSDAGVKSQEESALELEDTNMVM*PAASPI
Trigger: GATAGGGCTGGCTGCTGGCCACATCACCATGTTGGT...ATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCCTGCATCGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000193149.2
CDS-3UTR TCA 90 bp TGGCCCAGTGTGTCGGCTGTATACGCCATGATCTCAATGGCCTCGCCTTTCAGGAATCTCCGTAGACGATaGGGTCTGGTAAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: WPSVSAVYAMISMASPFRNLRRR*GLVSEQ
Trigger: CTGCTCACTTACCAGACCTCATCGTCTACGGAGATT...CCTGAAAGGCGAGGCCATTGAGATCATGGCGTATACAGCCGACACACTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp GATGTCCTCTTCTGTTACAGAAAGGTCCCACAACCATCCCAGCACCTGGACCAAGCACTTTCCAGCGCATaGGTGATCTCATCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DVLFCYRKVPQPSQHLDQALSSA*VISSGA
Trigger: GGCTCCCGATGAGATCACTCATGCGCTGGAAAGTGC...TTGGTCCAGGTGCTGGGATGGTTGTGGGACCTTTCTGTAACAGAAGAGGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR TCA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAGGGATTCCGAAGAAGTaGCCACATCCTGTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLGIPKK*PHPVGS
Trigger: CGAGCCCACAGGATGTGGTCACTTCTTCGGAATCCC...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GACAGAGTCGCAGCTCACGATGCCCGGGTAGTACATCATCATCCTGGCAGCAATTGTACATGGCCGTGCTaGACTTCTCAGTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: DRVAAHDARVVHHHPGSNCTWPC*TSQSLQ
Trigger: CTGCAATGACTGAGAAGTTCAGCACGGCCATGTACA...ATTGCTGCCAGGATGATGATGTACTACCCGGGCATCGTGAGCTGCGACTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
CDS-3UTR CCA 90 bp CCAGACAGCGATGCAGGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGCTTCAAACAAGCCATaGATCTCCAGGCTGCACTTA +
Preference number: 4 (lower is better)
Translates to: PDSDAGVKSQEESALELEASNKP*ISRLHL
Trigger: TAAGTGCAGCCTGGAGATCCATGGCTTGTTTGAAGC...CTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCCTGCATCGCTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000193149.2
CDS-3UTR CCA 90 bp GATGCAGGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTACCAACATGGTGATGTaGCCAGCAGCCAGCCCTATC +
Preference number: 4 (lower is better)
Translates to: DAGVKSQEESALELEDSVTNMVM*PAASPI
Trigger: GATAGGGCTGGCTGCTGGCCACATCACCATGTTGGT...AACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCCTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000193149.2
3UTR CAA 72 bp CCCACTGTCCTGAGCGTTCTCGGCCTGTTCTTCTATTaGCTTCTGCAAGTGGAGGACTTGCCCTTCCATGTA +
Preference number: 4 (lower is better)
Translates to: PTVLSVLGLFFY*LLQVEDLPFHV
Trigger: TACATGGAAGGGCAAGTCCTCCACTTGCAGAAGCAAATAGAAGAACAGGCCGAGAACGCTCAGGACAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp TGGCCCAGTGTGTCGGCTGTATACGCCATGATCTCAATGGCCTCGCCTTTCAGGATCAAAACATTTTACTaGCGGCCGTTCCGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: WPSVSAVYAMISMASPFRIKTFY*RPFRRE
Trigger: TTCTCTCCGGAACGGCCGTCAGTAAAATGTTTTGAT...CCTGAAAGGCGAGGCCATTGAGATCATGGCGTATACAGCCGACACACTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp TGGCCCAGTGTGTCGGCTGTATACGCCATGATCTCAATGGCCTCGCCTTTCAGGCTGCCAGCAGTTTGGTaGCAAAATAACGTCGTTCAT +
Preference number: 4 (lower is better)
Translates to: WPSVSAVYAMISMASPFRLPAVW*QNNVVH
Trigger: ATGAACGACGTTATTTTGTCACCAAACTGCTGGCAG...CCTGAAAGGCGAGGCCATTGAGATCATGGCGTATACAGCCGACACACTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR TCA 90 bp CTGCTCCAACCCAGGGCTCCCCCTGAGGAAGGTCACTATTGCTTACTGAACTCTGGATGGCTGAGCCTATaGCTTCTACTTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLQPRAPPEEGHYCLLNSGWLSL*LLLCLA
Trigger: AGCAAGACAAAGTAGAAGTCATAGGCTCAGCCATCC...AGAGTTCAGTAAGCAATAGTGACCTTCCTCAGGGGGAGCCCTGGGTTGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR TCA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTTGCTGCCATCGTAGGTaGCAGAGTCGCAGCTCACGA +
Preference number: 4 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLCCHRR*QSRSSR
Trigger: TCGTGAGCTGCGACTCTGTCACCTACGATGGCAGCA...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAAGGGAAACATTCTGTTaGGCAGCTTCAGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLRETFC*AASAPS
Trigger: GGAAGGCGCTGAAGCTGCTCAACAGAATGTTTCCCT...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAAGTCGCAGCTCACGATaGCCGGGTAGTACATCATCA +
Preference number: 4 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLSRSSR*PGSTSS
Trigger: TGATGATGTACTACCCGGGCATCGTGAGCTGCGACT...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp GTGAGGTGCCTGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTACATTAGAACTCGGCTaGAGTTCGTCATCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: VRCLWGTTMAPEAGTDNFTLELG*SSSSKS
Trigger: ACTTTTTGATGACGAACTGCAGCCGAGTTCTAATGT...AAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACAGGCACCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp GTGAGGTGCCTGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTCTTTTGCTCAGTCTCTaGTTGTTGAAAAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: VRCLWGTTMAPEAGTDNFLLLSL*LLKKEN
Trigger: GTTCTCCTTTTTCAACAAGCAGAGACTGAGCAAAAG...AAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACAGGCACCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp ACAGCCAGGGGAGGTAAAGGCAGCTGTGCACAGCTAAAAGCAAGCCAGGCTTTGGCTTCAAACAAGCCATaGATCTCCAGGCTGCACTTA +
Preference number: 4 (lower is better)
Translates to: TARGGKGSCAQLKASQALASNKP*ISRLHL
Trigger: TAAGTGCAGCCTGGAGATCCATGGCTTGTTTGAAGC...CAAAGCCTGGCTTGCTTTTAGCTGTGCACAGCTGCCTTTACCTCCCCTGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR CCA 90 bp GTCCCACTCTTGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAGAGAAGACAATCCCACTaGCAACACCGATGGAGACAG +
Preference number: 4 (lower is better)
Translates to: VPLLKSGIPDSDAGVKSQRRQSH*QHRWRQ
Trigger: CTGTCTCCATCGGTGTTGCCAGTGGGATTGTCTTCT...CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR CCA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGGGCACCGAGCCCTCCTaGGTATGCTGGTTCATGAAG +
Preference number: 4 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLGTEPS*VCWFMK
Trigger: CTTCATGAACCAGCATACCCAGGAGGGCTCGGTGCC...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp AGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCTTCATTGTGGTGTACATGGCCGTGCTaGACTTCTCAGTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: SPRRSPLWNLRILLSSLWCTWPC*TSQSLQ
Trigger: CTGCAATGACTGAGAAGTTCAGCACGGCCATGTACA...CCACAATGAAGACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
ENSMUST00000193149.2
CDS-3UTR GCA 90 bp GATGCAGGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTCTCCGATCACAGAGCTaGCAGCAGTTTGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: DAGVKSQEESALELEDSVLRSQS*QQFGDK
Trigger: TTTGTCACCAAACTGCTGGCAGCTCTGTGATCGGAG...AACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCCTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000193149.2
CDS-3UTR GCA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAGATCAGACTCCAGCATaGAGGCAAGCCTTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLDQTPA*RQALGS
Trigger: ACTTCCTAAGGCTTGCCTGCATGCTGGAGTCTGATC...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp GTCCCACTCTTGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAGCTTCTTCAGCCTCCTTaGCTTCAAACAAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: VPLLKSGIPDSDAGVKSQLLQPP*LQTSHG
Trigger: TCCATGGCTTGTTTGAAGCCAAGGAGGCTGAAGAAG...CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR CCA 90 bp CTCAATGGCCTCGCCTTTCAGGGGGAGGTTCAGGAGCTGCTCCATGACCAGTATCGGATTTTGTGGACCTaGGAGCAGAAGTCAAATATA +
Preference number: 4 (lower is better)
Translates to: LNGLAFQGEVQELLHDQYRILWT*EQKSNI
Trigger: TATATTTGACTTCTGCTCCCAGGTCCACAAAATCCG...ATACTGGTCATGGAGCAGCTCCTGAACCTCCCCCTGAAAGGCGAGGCCATTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
3UTR CAA 72 bp ATCTTAACTCGAATGTCCAGGCCTTCTTCAGCCTCCTaGGCTTCAAACAAGCCATGGATCTCCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ILTRMSRPSSAS*ASNKPWISRLH
Trigger: GTGCAGCCTGGAGATCCATGGCTTGTTTGAAGCCAAGGAGGCTGAAGAAGGCCTGGACATTCGAGTTAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp AGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCTTCATTGTGGAGTGAGCAGCTATCTTaGCGATTGCCCTGTCTTGTA +
Preference number: 4 (lower is better)
Translates to: SPRRSPLWNLRILLSSLWSEQLS*RLPCLV
Trigger: TACAAGACAGGGCAATCGTCAAGATAGCTGCTCACT...CCACAATGAAGACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp ATTTTCCTGCTCCAACCCAGGGCTCCCCCTGAGGAAGGTCACTATTGCTTACTGATCAAAACATTTTACTaGCGGCCGTTCCGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: IFLLQPRAPPEEGHYCLLIKTFY*RPFRRE
Trigger: TTCTCTCCGGAACGGCCGTCAGTAAAATGTTTTGAT...CAGTAAGCAATAGTGACCTTCCTCAGGGGGAGCCCTGGGTTGGAGCAGGAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR TCA 90 bp ATTTTCCTGCTCCAACCCAGGGCTCCCCCTGAGGAAGGTCACTATTGCTTACTGCACTTATGTAGTAGTTaGGGATCTCCACGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: IFLLQPRAPPEEGHYCLLHLCSS*GSPRAV
Trigger: AACAGCTCGTGGAGATCCTCAACTACTACATAAGTG...CAGTAAGCAATAGTGACCTTCCTCAGGGGGAGCCCTGGGTTGGAGCAGGAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR TCA 90 bp GAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACCAAAGACCAACATGGTaGTGTGGCCAGCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: EAGTDNFILSNLAASDLDQRPTW*CGQQPA
Trigger: GGCTGGCTGCTGGCCACATCACCATGTTGGTCTTTG...GTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp ATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGCACTTTCCAGCGCATaGGTGATCTCATCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: MAPEAGTDNFILSNLAASALSSA*VISSGA
Trigger: GGCTCCCGATGAGATCACTCATGCGCTGGAAAGTGC...TGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTCATCTCACCAGCATCTaGTGGGAAAGGCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLHLTSI*WERLML
Trigger: CAGCATGAGCCTTTCCCATCAGATGCTGGTGAGATG...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACGGGCCAGAGGCAGGATaGCAATCTGGAGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: EAGTDNFILSNLAASDLDGPEAG*QSGAVP
Trigger: AGGAACTGCTCCAGATTGTCATCCTGCCTCTGGCCC...GTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp AGCGATGCAGGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTACGTCACTTTCTCATTaGGGCCCAAACACTGATACA +
Preference number: 4 (lower is better)
Translates to: SDAGVKSQEESALELEDSTSLSH*GPNTDT
Trigger: TGTATCAGTGTTTGGGCCTCAATGAGAAAGTGACGT...AGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCCTGCATCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR TCA 90 bp CCAGACAGCGATGCAGGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGTTCTTAACTGCTCTCTaGTCTGGAATCCTCTCAATT +
Preference number: 4 (lower is better)
Translates to: PDSDAGVKSQEESALELEFLTAL*SGILSI
Trigger: AATTGAGAGGATTCCAGATCAGAGAGCAGTTAAGAA...CTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCCTGCATCGCTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193149.2
CDS-3UTR CCA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAACAGTACGGATTTTGTaGACCTGGGAGCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLTVRIL*TWEQKS
Trigger: TGACTTCTGCTCCCAGGTCCACAAAATCCGTACTGT...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp CCACAGCAAGGAGAAGCAGGAAGCTTGCAGGTAAAGTTGTGCCAGTTTCTTCCCCACTGGCAACACCGATaGAGACAGTACGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: PQQGEAGSLQVKLCQFLPHWQHR*RQYGFC
Trigger: ACAAAATCCGTACTGTCTCCATCGGTGTTGCCAGTG...GGGAAGAAACTGGCACAACTTTACCTGCAAGCTTCCTGCTTCTCCTTGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR CCA 90 bp GGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCCAGTGGTTGCACCGATaGGCACTTTCTTCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: GAPPWLRKLAQTTLFFLIQWLHR*ALSSKK
Trigger: CTTTTTGGAAGAAAGTGCCCATCGGTGCAACCACTG...GATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp TGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGAGAAGACGGGGCCGGTaGTATTTTGAGCCACAAGGG +
Preference number: 4 (lower is better)
Translates to: WLRKLAQTTLFFLILLLQRRRGR*YFEPQG
Trigger: CCCTTGTGGCTCAAAATACCACCGGCCCCGTCTTCT...CTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
3UTR CAA 72 bp TTCTCCACATGCATTTGGAAAGTCAGGGTGAGCAGATaGCAGGGAAACATTCTGTTGAGCAGCTTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: FSTCIWKVRVSR*QGNILLSSFSA
Trigger: GGCGCTGAAGCTGCTCAACAGAATGTTTCCCTGCAATCTGCTCACCCTGACTTTCCAAATGCATGTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp GTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCTTCATTAATCTCCGTAGACGATaGGGTCTGGTAAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VKSQEESALELEDSVVFINLRRR*GLVSEQ
Trigger: CTGCTCACTTACCAGACCTCATCGTCTACGGAGATT...AATGAAGACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp GTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCTTCATTTGTACATGGCCGTGCTaGACTTCTCAGTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: VKSQEESALELEDSVVFICTWPC*TSQSLQ
Trigger: CTGCAATGACTGAGAAGTTCAGCACGGCCATGTACA...AATGAAGACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
ENSMUST00000193149.2
CDS-3UTR TCA 90 bp AGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCTTCATTGTGGCTGCCAGCAGTTTGGTaGCAAAATAACGTCGTTCAT +
Preference number: 4 (lower is better)
Translates to: SPRRSPLWNLRILLSSLWLPAVW*QNNVVH
Trigger: ATGAACGACGTTATTTTGTCACCAAACTGCTGGCAG...CCACAATGAAGACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000193149.2
CDS-3UTR TCA 90 bp GTCCCACTCTTGAAGTCTGGCATACCAGACAGCGATGCAGGAGTAAAGTCCCAGACCTTAACTGCTCTCTaGTCTGGAATCCTCTCAATT +
Preference number: 4 (lower is better)
Translates to: VPLLKSGIPDSDAGVKSQTLTAL*SGILSI
Trigger: AATTGAGAGGATTCCAGATCAGAGAGCAGTTAAGGT...CTGGGACTTTACTCCTGCATCGCTGTCTGGTATGCCAGACTTCAAGAGTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR TCA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTAAGTTAACCCTTCCTTaGGCTTCAGGGCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLKLTLP*ASGPKS
Trigger: GCTCTTTGGCCCTGAAGCTCAAGGAAGGGTTAACTT...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCAATGGTGGTAGGGAATaGAGTCTACGTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GAPPWLRKLAQTTLFFLINGGRE*SLRFCS
Trigger: ACTGCAGAAACGTAGACTTCATTCCCTACCACCATT...GATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTAGTTGTCTCCCAGGATaGGGTAGGCAGATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLSCLPG*GRQMPV
Trigger: AACTGGCATCTGCCTACCTCATCCTGGGAGACAACT...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp ATGACAATCTGGAGCAGTTCCTTACACTGGCAGGATTCCAGAGGGATGATGTCACTCCGATCACAGAGCTaGCAGCAGTTTGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: MTIWSSSLHWQDSRGMMSLRSQS*QQFGDK
Trigger: TTTGTCACCAAACTGCTGGCAGCTCTGTGATCGGAG...TGACATCATCCCTCTGGAATCCTGCCAGTGTAAGGAACTGCTCCAGATTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR GCA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTACACGGGTCCAGGATCTaGAACTCCTTTCATAACTTT +
Preference number: 4 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLHGSRI*NSFHNF
Trigger: AAAGTTATGAAAGGAGTTGCAGATCCTGGACCCGTG...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp CTCCATGACCAGTATTTCATATTTGAACCACACGCCCTGGTAGCCAGCGAGGTGCACGGGTCCAGGATCTaGAACTCCTTTCATAACTTT +
Preference number: 4 (lower is better)
Translates to: LHDQYFIFEPHALVASEVHGSRI*NSFHNF
Trigger: AAAGTTATGAAAGGAGTTGCAGATCCTGGACCCGTG...CACCTCGCTGGCTACCAGGGCGTGTGGTTCAAATATGAAATACTGGTCATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR GCA 90 bp GGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCCTTCGTGTCACGAGATaGTTAGCTCTGTCGGAAAAT +
Preference number: 4 (lower is better)
Translates to: GAPPWLRKLAQTTLFFLILRVTR*LALSEN
Trigger: ATTTTCCGACAGAGCTAAGCATCTCGTGACACGAAG...GATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp GGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCCGTCTCCCATTAGTATaGAGACATAGGCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: GAPPWLRKLAQTTLFFLIRLPLV*RHRPSD
Trigger: ATCTGATGGCCTATGTCTGCATACTAATGGGAGACG...GATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGAACCAACATGGTGATGTaGCCAGCAGCCAGCCCTATC +
Preference number: 4 (lower is better)
Translates to: AGTDNFILSNLAASDLDRTNMVM*PAASPI
Trigger: GATAGGGCTGGCTGCTGGCCACATCACCATGTTGGT...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTAGAAGACAATCCCACTaGCAACACCGATGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLRRQSH*QHRWRQ
Trigger: CTGTCTCCATCGGTGTTGCCAGTGGGATTGTCTTCT...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTTCCGGTTCTTCATTATaGCATTGGCAGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLSGSSL*HWQLHR
Trigger: CCTGTGCAGCTGCCAATGCCATAATGAAGAACCGGA...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTATGCTGGTTCATGAAGTaGGAGAGTCTGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLCWFMK*ESLFFS
Trigger: GGAGAAAAACAGACTCTCCCACTTCATGAACCAGCA...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTAGGAGGAGTCCGCTCTaGAACTTGAGGATTCTGTTG +
Preference number: 4 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLRRSPL*NLRILL
Trigger: CAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCT...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
3UTR CAA 72 bp ATAAACAGGGCTTCCAGTTGCTTCTGCTTTCTTATCTaGCTCATCCTGGACATCTCCCGGGAAACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: INRASSCFCFLI*LILDISRETGN
Trigger: GTTCCCTGTTTCCCGGGAGATGTCCAGGATGAGCAAGATAAGAAAGCAGAAGCAACTGGAAGCCCTGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 72 bp GGCCTGTTCTTCTATTTGCTTCTGCAAGTGGAGGACTaGCCCTTCCATGTACCTAGAGATCCCTTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: GLFFYLLLQVED*PFHVPRDPFVV
Trigger: TACTACGAAGGGATCTCTAGGTACATGGAAGGGCAAGTCCTCCACTTGCAGAAGCAAATAGAAGAACAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGAGTGAGCAGCTATCTTaGCGATTGCCCTGTCTTGTA +
Preference number: 4 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLSEQLS*RLPCLV
Trigger: TACAAGACAGGGCAATCGTCAAGATAGCTGCTCACT...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTTGTACATGGCCGTGCTaGACTTCTCAGTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLCTWPC*TSQSLQ
Trigger: CTGCAATGACTGAGAAGTTCAGCACGGCCATGTACA...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp TTCCTCAGCATCTTCTTGGCGAGGACCATCTGCCCCATGTTAAAACAGACCTCACACTTATGTAGTAGTTaGGGATCTCCACGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FLSIFLARTICPMLKQTSHLCSS*GSPRAV
Trigger: AACAGCTCGTGGAGATCCTCAACTACTACATAAGTG...TGAGGTCTGTTTTAACATGGGGCAGATGGTCCTCGCCAAGAAGATGCTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp AAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCTTCATTGTGCACTTATGTAGTAGTTaGGGATCTCCACGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KSQEESALELEDSVVFIVHLCSS*GSPRAV
Trigger: AACAGCTCGTGGAGATCCTCAACTACTACATAAGTG...CACAATGAAGACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
ENSMUST00000193149.2
CDS-3UTR TCA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGGCAATGTTGACCTTCTaGCCGATGACTGTGTACTCA +
Preference number: 4 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLAMLTF*PMTVYS
Trigger: TGAGTACACAGTCATCGGTCAGAAGGTCAACATTGC...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGACTTTCTTCTGGTCCTTaGGCCACAGTTCGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGTDNFILSNLAASDLDRLSSGP*ATVRRL
Trigger: CAGCCTACGAACTGTGGCTCAAGGACCAGAAGAAAG...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGGCTGATCTTAGTCAGTaGAATAGCAACAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLADLSQ*NSNSPV
Trigger: CACAGGGCTGTTGCTATTGCACTGACTAAGATCAGC...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp GGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCAACAGGGCTTCCAGTTaGTTCTGCTTTCTTATCTTG +
Preference number: 4 (lower is better)
Translates to: GAPPWLRKLAQTTLFFLINRASS*FCFLIL
Trigger: CAAGATAAGAAAGCAGAAGCAACTGGAAGCCCTGTT...GATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTTCAAACAAGCCATaGATCTCCAGGCTGCACTTA +
Preference number: 4 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLASNKP*ISRLHL
Trigger: TAAGTGCAGCCTGGAGATCCATGGCTTGTTTGAAGC...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp TGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGAGCAGTTCCTTACACTaGCAGGATTCCAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: WLRKLAQTTLFFLILLLQSSSLH*QDSRGM
Trigger: CATCCCTCTGGAATCCTGCCAGTGTAAGGAACTGCT...CTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGAAATCTCCGTAGACGATaGGGTCTGGTAAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AGTDNFILSNLAASDLDRNLRRR*GLVSEQ
Trigger: CTGCTCACTTACCAGACCTCATCGTCTACGGAGATT...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGATCAAAACATTTTACTaGCGGCCGTTCCGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLIKTFY*RPFRRE
Trigger: TTCTCTCCGGAACGGCCGTCAGTAAAATGTTTTGAT...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTGCCAGCAGTTTGGTaGCAAAATAACGTCGTTCAT +
Preference number: 4 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLLPAVW*QNNVVH
Trigger: ATGAACGACGTTATTTTGTCACCAAACTGCTGGCAG...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCGGATGGCTGAGCCTATaGCTTCTACTTTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTGWLSL*LLLCLA
Trigger: AGCAAGACAAAGTAGAAGTCATAGGCTCAGCCATCC...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCCTGTGGTTCTCATGCTaGGAGGCCAGATATTCGATT +
Preference number: 4 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTLWFSC*EARYSI
Trigger: AATCGAATATCTGGCCTCTCAGCATGAGAACCACAG...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCGTCTTGACTCTATTTTaGAGATTGGTCTGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: GAPPWLRKLAQTTLFFLIVLTLF*RLVCRS
Trigger: AGAACGACAGACCAATCTTCAAAATAGAGTCAAGAC...GATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGTCAGTCTCTGCTTGTTaGAAAAGGAGAACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLSVSAC*KRRTLW
Trigger: CCACAGAGTTCTCCTTTTTCAACAAGCAGAGACTGA...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp TGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGCCAGTATTTCATATTTaGACCACACGCCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: WLRKLAQTTLFFLILLLQPVFHI*TTRPGS
Trigger: GCTACCAGGGCGTGTGGTTCAAATATGAAATACTGG...CTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTGTCCGCTCTGGAACTTaGGGATTCTGTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLVRSGT*GFCCLH
Trigger: ATGAAGACAACAGAATCCTCAAGTTCCAGAGCGGAC...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp ACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTAAGTTGTCCCACTCTTaGAGTCTGGCATACCAGACA +
Preference number: 4 (lower is better)
Translates to: TTMAPEAGTDNFILSNLAKLSHS*SLAYQT
Trigger: TGTCTGGTATGCCAGACTTCAAGAGTGGGACAACTT...AGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGACTCCGATCACAGAGCTaGCAGCAGTTTGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: AGTDNFILSNLAASDLDRLRSQS*QQFGDK
Trigger: TTTGTCACCAAACTGCTGGCAGCTCTGTGATCGGAG...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp TTAAATCCTTGGGATGTCACCATCCTCTTGACAGTGTCCATATCCAAAGTGTTGAGTCGCAGCTCACGATaGCCGGGTAGTACATCATCA +
Preference number: 4 (lower is better)
Translates to: LNPWDVTILLTVSISKVLSRSSR*PGSTSS
Trigger: TGATGATGTACTACCCGGGCATCGTGAGCTGCGACT...CAACACTTTGGATATGGACACTGTCAAGAGGATGGTGACATCCCAAGGATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR GCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTTTGCAGGTAAAGTTGTaGCAGTTTCTTCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLLQVKL*QFLPWH
Trigger: GTGCCAGGGAAGAAACTGGCACAACTTTACCTGCAA...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAGACGAAATAGAAAAATaGCTTGCTGAAGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLDEIEK*LAEDVL
Trigger: GAGGACATCTTCAGCAAGGCATTTTTCTATTTCGTC...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCTTCTTCAGCCTCCTTaGCTTCAAACAAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLLLQPP*LQTSHG
Trigger: TCCATGGCTTGTTTGAAGCCAAGGAGGCTGAAGAAG...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp TTTTCAGCAATTCTTCACAGTAATACGGAATCCCGCAGCTTCCCTCTACCAGGTACAGTACGGATTTTGTaGACCTGGGAGCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: FSAILHSNTESRSFPLPGTVRIL*TWEQKS
Trigger: TGACTTCTGCTCCCAGGTCCACAAAATCCGTACTGT...ACCTGGTAGAGGGAAGCTGCGGGATTCCGTATTACTGTGAAGAATTGCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR CCA 90 bp TGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGCACTGGCAACACCGATaGAGACAGTACGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: WLRKLAQTTLFFLILLLQHWQHR*RQYGFC
Trigger: ACAAAATCCGTACTGTCTCCATCGGTGTTGCCAGTG...CTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGTTCCATCCACAAACTaGGCCTCATCGATGATGAAA +
Preference number: 4 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLVPSTN*ASSMMK
Trigger: TTTCATCATCGATGAGGCCCAGTTTGTGGATGGAAC...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp TGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGTGCAAGACTTTCTTCTaGTCCTTGAGCCACAGTTCG +
Preference number: 4 (lower is better)
Translates to: WLRKLAQTTLFFLILLLQCKTFF*SLSHSS
Trigger: CGAACTGTGGCTCAAGGACCAGAAGAAAGTCTTGCA...CTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp ATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGGCAGGATGACAATCTaGAGCAGTTCCTTACACTGG +
Preference number: 4 (lower is better)
Translates to: MAPEAGTDNFILSNLAASGRMTI*SSSLHW
Trigger: CCAGTGTAAGGAACTGCTCCAGATTGTCATCCTGCC...TGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGAAAGGCTACGAAATGTTaGGCCAGAGGCAGGATGACA +
Preference number: 4 (lower is better)
Translates to: AGTDNFILSNLAASDLDRKATKC*ARGRMT
Trigger: TGTCATCCTGCCTCTGGCCCAACATTTCGTAGCCTT...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGTTCTCCACATGCATTTaGAAAGTCAGGGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLFSTCI*KVRVSR
Trigger: TCTGCTCACCCTGACTTTCCAAATGCATGTGGAGAA...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
3UTR CAA 72 bp AGAGGTTTACTCAGTCTGCAGAGAACCATCTGGTATTaGTTGGGATTCCGAAGAAGTGACCACATCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RGLLSLQRTIWY*LGFRRSDHILW
Trigger: CCACAGGATGTGGTCACTTCTTCGGAATCCCAACAAATACCAGATGGTTCTCTGCAGACTGAGTAAACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 72 bp TCTCCTGTTAACTCGGAGGCTGAGTACCACCATTCCTaGCTCATGCTTAGCCAACATTTCTCCAGCAAATTC +
Preference number: 4 (lower is better)
Translates to: SPVNSEAEYHHS*LMLSQHFSSKF
Trigger: GAATTTGCTGGAGAAATGTTGGCTAAGCATGAGCAAGGAATGGTGGTACTCAGCCTCCGAGTTAACAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 72 bp AGGAAGGAGCAGCCCTTATCAAACATGAAGACCTTATaGATCTGGCCTCGGAAGACCTTCAAGACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: RKEQPLSNMKTL*IWPRKTFKTEV
Trigger: CACTTCTGTCTTGAAGGTCTTCCGAGGCCAGATCAATAAGGTCTTCATGTTTGATAAGGGCTGCTCCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp GGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTACTCCGGAAGCAATTaGAAACATTTGATTCCACTA +
Preference number: 4 (lower is better)
Translates to: GAPPWLRKLAQTTLFFLIYSGSN*KHLIPL
Trigger: TAGTGGAATCAAATGTTTTCAATTGCTTCCGGAGTA...GATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTTTCCTAGGGAGCTCTaGCTTAGAAAAGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTFPREL*LRKDGF
Trigger: GAAGCCATCTTTTCTAAGTCAGAGCTCCCTAGGAAA...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCAGGATTCCAGAGGGATaGTGTCATTTGGAGACGATT +
Preference number: 4 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTRIPEG*CHLETI
Trigger: AATCGTCTCCAAATGACATCATCCCTCTGGAATCCT...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGATTTGGAAAGTCAGGGTaGGCAGATTGCAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: AGTDNFILSNLAASDLDRFGKSG*ADCRET
Trigger: TGTTTCCCTGCAATCTGCTCACCCTGACTTTCCAAA...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGAGGGTATGCTGGTTCATaGAGTGGGAGAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: AGTDNFILSNLAASDLDRGYAGS*SGRVCF
Trigger: AAAACAGACTCTCCCACTTCATGAACCAGCATACCC...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGATCTGGAAGTCATTTTaGGTTTCCAGGGAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLIWKSF*VSREVF
Trigger: GAACACTTCCCTGGAAACTCAAAATGACTTCCAGAT...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp ACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTATGGCCAAGTCCAGATaGCCCATTAAGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: TTMAPEAGTDNFILSNLAMAKSR*PIKNLM
Trigger: CATCAAGTTCTTAATGGGTCATCTGGACTTGGCCAT...AGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp CTGCAGAGAACCATCTGGTATTTGTTGGGATTCCGAAGAAGTGACCACATCCTGGAAGCTAACCTTAACTaGTCTCTGATCTGGAATCCT +
Preference number: 4 (lower is better)
Translates to: LQRTIWYLLGFRRSDHILEANLN*SLIWNP
Trigger: AGGATTCCAGATCAGAGAGCAGTTAAGGTTAGCTTC...CAGGATGTGGTCACTTCTTCGGAATCCCAACAAATACCAGATGGTTCTCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR GCA 90 bp TTAAATCCTTGGGATGTCACCATCCTCTTGACAGTGTCCATATCCAAAGTGTTGGATCAGACTCCAGCATaGAGGCAAGCCTTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LNPWDVTILLTVSISKVLDQTPA*RQALGS
Trigger: ACTTCCTAAGGCTTGCCTGCATGCTGGAGTCTGATC...CAACACTTTGGATATGGACACTGTCAAGAGGATGGTGACATCCCAAGGATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR GCA 90 bp GGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCTTCTGCTTGTCATCGATCTaGTTCAAAATGATTTCCATC +
Preference number: 4 (lower is better)
Translates to: GVKSQEESALELEDSVVFCLSSI*FKMISI
Trigger: GATGGAAATCATTTTGAAGCAGATCGATGACAAGCA...GAAGACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR GCA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCTGCTTTCTTATCTTaGTCATCCTGGACATCTCCC +
Preference number: 4 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTSAFLS*SSWTSP
Trigger: GGGAGATGTCCAGGATGAGCAAGATAAGAAAGCAGA...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTGCCTGTTCTTCTATTTaGTTCTGCAAGTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLACSSI*FCKWRT
Trigger: AGTCCTCCACTTGCAGAAGCAAATAGAAGAACAGGC...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCCTCTGACCTCCCTTaGCTGATACAATTTTATCCC +
Preference number: 4 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTSSDLP*LIQFYP
Trigger: GGGATAAAATTGTATCAGGCAAGGGAGGTCAGAGGA...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp TGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGAAACCATTGAAAAGTTaGGGGGACAGAACCAACTCC +
Preference number: 4 (lower is better)
Translates to: WLRKLAQTTLFFLILLLQKPLKS*GDRTNS
Trigger: GGAGTTGGTTCTGTCCCCCCAACTTTTCAATGGTTT...CTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
3UTR CAA 72 bp CCAGGTCACGTTTGTCTTTTGCTCAGTCTCTGCTTGTaGAAAAAGGAGAACTCTGTGGTGGTCGAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PGHVCLLLSLCL*KKENSVVVEVF
Trigger: AAAAACCTCGACCACCACAGAGTTCTCCTTTTTCAACAAGCAGAGACTGAGCAAAAGACAAACGTGACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 72 bp CATGAAGTGGGAGAGTCTGTTTTTCTCCACATGCATTaGGAAAGTCAGGGTGAGCAGATTGCAGGGAAACAT +
Preference number: 4 (lower is better)
Translates to: HEVGESVFLHMH*ESQGEQIAGKH
Trigger: ATGTTTCCCTGCAATCTGCTCACCCTGACTTTCCAAATGCATGTGGAGAAAAACAGACTCTCCCACTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp GAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACCACTTATGTAGTAGTTaGGGATCTCCACGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: EAGTDNFILSNLAASDLDHLCSS*GSPRAV
Trigger: AACAGCTCGTGGAGATCCTCAACTACTACATAAGTG...GTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCACCTTAACTGCTCTCTaGTCTGGAATCCTCTCAATT +
Preference number: 4 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTTLTAL*SGILSI
Trigger: AATTGAGAGGATTCCAGATCAGAGAGCAGTTAAGGT...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp ATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCACGGGAAACAGGGAACTaGACATGGAAGATGTCATTA +
Preference number: 4 (lower is better)
Translates to: MAPEAGTDNFILSNLAASRETGN*TWKMSL
Trigger: TAATGACATCTTCCATGTTCAGTTCCCTGTTTCCCG...TGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp TGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACAAATTATTCAGCCTaGCACCACTCACAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: WLRKLAQTTLFFLILLLQTNYSA*HHSQGN
Trigger: GTTACCTTGTGAGTGGTGTCAGGCTGAATAATTTGT...CTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGAATGTCACCATCCTCTTaGCAGTGTCCATATCCAAAG +
Preference number: 4 (lower is better)
Translates to: AGTDNFILSNLAASDLDRMSPSS*QCPYPK
Trigger: CTTTGGATATGGACACTGTCAAGAGGATGGTGACAT...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCGAAGCTAACCTTAACTaGTCTCTGATCTGGAATCCT +
Preference number: 4 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTEANLN*SLIWNP
Trigger: AGGATTCCAGATCAGAGAGCAGTTAAGGTTAGCTTC...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTGCTTCCAGTTGCTTCTaGTTTCTTATCTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLASSCF*FLILLI
Trigger: GATGAGCAAGATAAGAAAGCAGAAGCAACTGGAAGC...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp ACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGAGGTTTACTCAGTCTaGAGAGAACCATCTGGTATT +
Preference number: 4 (lower is better)
Translates to: TTMAPEAGTDNFILSNLAEVYSV*REPSGI
Trigger: AATACCAGATGGTTCTCTGCAGACTGAGTAAACCTC...AGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp GAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACTCTTCTATTTGCTTCTaGAAGTGGAGGACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: EAGTDNFILSNLAASDLDSSICF*KWRTCP
Trigger: AGGGCAAGTCCTCCACTTGCAGAAGCAAATAGAAGA...GTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp AAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCTTCATTGTGTCAAATGTTCTTAACTaGTCTCTGATCTGGAATCCT +
Preference number: 4 (lower is better)
Translates to: KSQEESALELEDSVVFIVSNVLN*SLIWNP
Trigger: AGGATTCCAGATCAGAGAGCAGTTAAGAACATTTGA...CACAATGAAGACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193149.2
CDS-3UTR CCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCGGATTTTGTGGACCTaGGAGCAGAAGTCAAATATA +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLRILWT*EQKSNI
Trigger: TATATTTGACTTCTGCTCCCAGGTCCACAAAATCCG...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGACTGCAGAGAACCATCTaGTATTTGTTGGGATTCCGA +
Preference number: 4 (lower is better)
Translates to: AGTDNFILSNLAASDLDRLQRTI*YLLGFR
Trigger: TCGGAATCCCAACAAATACCAGATGGTTCTCTGCAG...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp ACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTAACCATCCCAGCACCTaGACCAAATGTTTATATCTG +
Preference number: 4 (lower is better)
Translates to: TTMAPEAGTDNFILSNLANHPST*TKCLYL
Trigger: CAGATATAAACATTTGGTCCAGGTGCTGGGATGGTT...AGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
3UTR CAA 72 bp GACTTCTTTCTGCCCCTCAGATATGGAAGTGAAAAGTaGCATGTCATCTGTTGGCCTAACAGAGTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: DFFLPLRYGSEK*HVICWPNRVLE
Trigger: TTCAAGCACTCTGTTAGGCCAACAGATGACATGCAACTTTTCACTTCCATATCTGAGGGGCAGAAAGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTCGATCTGCTTCAAAATaGTTTCCATCACGTACTTTT +
Preference number: 4 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLRSASK*FPSRTF
Trigger: AAAAGTACGTGATGGAAATCATTTTGAAGCAGATCG...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CTCATCCAACAGCGTCTTGACTCTATTTTGAAGATTGGTCTGTCGTTCTTTGTAGCAATGTTGACCTTCTaGCCGATGACTGTGTACTCA +
Preference number: 4 (lower is better)
Translates to: LIQQRLDSILKIGLSFFVAMLTF*PMTVYS
Trigger: TGAGTACACAGTCATCGGTCAGAAGGTCAACATTGC...TACAAAGAACGACAGACCAATCTTCAAAATAGAGTCAAGACGCTGTTGGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR TCA 90 bp ACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTCATATCTGTTGCAGATaGGATATGCCATACCAAACA +
Preference number: 4 (lower is better)
Translates to: TTMAPEAGTDNFILSNLAHICCR*DMPYQT
Trigger: TGTTTGGTATGGCATATCTCATCTGCAACAGATATG...AGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCGATATTCGATTTCCATaGGTACCTGGCTTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTDIRFP*VPGFFH
Trigger: ATGGAAAAAGCCAGGTACTCATGGAAATCGAATATC...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGACCTCAGATATGGAAGTaGAAAGTTGCATGTCATCTG +
Preference number: 4 (lower is better)
Translates to: AGTDNFILSNLAASDLDRPQIWK*KVACHL
Trigger: CAGATGACATGCAACTTTTCACTTCCATATCTGAGG...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTGCATATTCAAAGGTCTaGCTCCAAGAATCTTCATTC +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLAYSKV*LQESSF
Trigger: GAATGAAGATTCTTGGAGTCAGACCTTTGAATATGC...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR TCA 90 bp ATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAAGCCAGAATAAAGCATaGTGTCCAAGCAGACGAAAT +
Preference number: 4 (lower is better)
Translates to: MAPEAGTDNFILSNLAASSQNKA*CPSRRN
Trigger: ATTTCGTCTGCTTGGACATCATGCTTTATTCTGGCT...TGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCATGGAAGTGAAAAGTTaGATGTCATCTGTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTMEVKS*MSSVGL
Trigger: TAGGCCAACAGATGACATGCAACTTTTCACTTCCAT...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
3UTR CAA 72 bp TCCCTTATTTCTGTGATGCTGAGATTCTCGGGGAACTaGTATTTCCTAGGGAGCTCTGACTTAGAAAAGATG +
Preference number: 4 (lower is better)
Translates to: SLISVMLRFSGN*YFLGSSDLEKM
Trigger: CATCTTTTCTAAGTCAGAGCTCCCTAGGAAATACAAGTTCCCCGAGAATCTCAGCATCACAGAAATAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 72 bp AAAGTCCAGGTAAGCCTTGATGATCTGGAAGTCATTTaGAGTTTCCAGGGAAGTGTTCATTTCCATCATCGC +
Preference number: 4 (lower is better)
Translates to: KVQVSLDDLEVI*SFQGSVHFHHR
Trigger: GCGATGATGGAAATGAACACTTCCCTGGAAACTCAAAATGACTTCCAGATCATCAAGGCTTACCTGGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR TCA 90 bp TTCTCCACATGCATTTGGAAAGTCAGGGTGAGCAGATTGCAGGGAAACATTCTGCGATCTGCTTCAAAATaGTTTCCATCACGTACTTTT +
Preference number: 4 (lower is better)
Translates to: FSTCIWKVRVSRLQGNILRSASK*FPSRTF
Trigger: AAAAGTACGTGATGGAAATCATTTTGAAGCAGATCG...CAGAATGTTTCCCTGCAATCTGCTCACCCTGACTTTCCAAATGCATGTGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR TCA 90 bp ACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTTACAATTTTATCCCATaGTGGAAGACTCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: TTMAPEAGTDNFILSNLAYNFIP*WKTQDC
Trigger: ACAGTCTTGAGTCTTCCATCATGGGATAAAATTGTA...AGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR GCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTTGCTTGTCATCGATCTaGTTCAAAATGATTTCCATC +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLCLSSI*FKMISI
Trigger: GATGGAAATCATTTTGAAGCAGATCGATGACAAGCA...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp ATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAATTTCCATGAGTACCTaGCTTTTTCCATATCCTGGT +
Preference number: 4 (lower is better)
Translates to: MAPEAGTDNFILSNLAASISMST*LFPYPG
Trigger: ACCAGGATATGGAAAAAGCCAGGTACTCATGGAAAT...TGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CCA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTTCAATTTTAAATCCTTaGGATGTCACCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLSILNP*DVTILL
Trigger: CAAGAGGATGGTGACATCCCAAGGATTTAAAATTGA...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
3UTR CAA 72 bp GTGCTTGAACATGTTATTCCAGGTCACGTTTGTCTTTaGCTCAGTCTCTGCTTGTTGAAAAAGGAGAACTCT +
Preference number: 4 (lower is better)
Translates to: VLEHVIPGHVCL*LSLCLLKKENS
Trigger: AGAGTTCTCCTTTTTCAACAAGCAGAGACTGAGCAAAAGACAAACGTGACCTGGAATAACATGTTCAAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
3UTR CAA 72 bp AGAAAAGATGGCTTCCTCTTCGTCAATTTTAAATCCTaGGGATGTCACCATCCTCTTGACAGTGTCCATATC +
Preference number: 4 (lower is better)
Translates to: RKDGFLFVNFKS*GCHHPLDSVHI
Trigger: GATATGGACACTGTCAAGAGGATGGTGACATCCCAAGGATTTAAAATTGACGAAGAGGAAGCCATCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000155216.8
CDS-3UTR CAA 90 bp GTGAGGTGCCTGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTTTCCTCAGCATCTTCTaGGCGAGGACCATCTGCCCC +
Preference number: 5 (lower is better)
Translates to: VRCLWGTTMAPEAGTDNFFLSIF*ARTICP
Trigger: GGGGCAGATGGTCCTCGCCAAGAAGATGCTGAGGAA...AAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACAGGCACCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GTGAGGTGCCTGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTAAAGTTGTCCCACTCTaGAAGTCTGGCATACCAGAC +
Preference number: 5 (lower is better)
Translates to: VRCLWGTTMAPEAGTDNFKVVPL*KSGIPD
Trigger: GTCTGGTATGCCAGACTTCAAGAGTGGGACAACTTT...AAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACAGGCACCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCAGGGTCTCCAAGGCCTaGAGTATCTCCACCCCACTG +
Preference number: 5 (lower is better)
Translates to: GAPPWLRKLAQTTLFFLIRVSKA*SISTPL
Trigger: CAGTGGGGTGGAGATACTCAAGGCCTTGGAGACCCT...GATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GATGCAGGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTCCTTCTTCAGCCTCCTaGGCTTCAAACAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: DAGVKSQEESALELEDSVPSSAS*ASNKPW
Trigger: CCATGGCTTGTTTGAAGCCAAGGAGGCTGAAGAAGG...AACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCCTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000148550.8
ENSMUST00000193149.2
CDS GCA 90 bp ATCTCCAGGCTGCACTTAATCACCACCGTGATGATGTTCTTCAGTTaGTTTCGTTCCACTTTCCACAGGGCCAGCAAGGCATCACCTGCA +
Preference number: 5 (lower is better)
Translates to: ISRLHLITTVMMFFS*FRSTFHRASKASPA
Trigger: TGCAGGTGATGCCTTGCTGGCCCTGTGGAAAGTGGAACGAAAGCAACTGAAGAACATCATCACGGTGGTGATTAAGTGCAGCCTGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000027852.15
ENSMUST00000111439.8
ENSMUST00000111440.8
ENSMUST00000148550.8
ENSMUST00000193149.2
CDS-3UTR CAA 90 bp GGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCGGCCTGTTCTTCTATTaGCTTCTGCAAGTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: GAPPWLRKLAQTTLFFLIGLFFY*LLQVED
Trigger: GTCCTCCACTTGCAGAAGCAAATAGAAGAACAGGCC...GATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp CTGCAGAGAACCATCTGGTATTTGTTGGGATTCCGAAGAAGTGACCACATCCTGCCTTCTTCAGCCTCCTaGGCTTCAAACAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: LQRTIWYLLGFRRSDHILPSSAS*ASNKPW
Trigger: CCATGGCTTGTTTGAAGCCAAGGAGGCTGAAGAAGG...CAGGATGTGGTCACTTCTTCGGAATCCCAACAAATACCAGATGGTTCTCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR CAA 90 bp GGAGTAAAGTCCCAGGAGGAGTCCGCTCTGGAACTTGAGGATTCTGTTGTCTTCAGTTCACAAACACAATaGTCACAGGGCGAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: GVKSQEESALELEDSVVFSSQTQ*SQGEAQ
Trigger: CTGAGCTTCGCCCTGTGACAATTGTGTTTGTGAACT...GAAGACAACAGAATCCTCAAGTTCCAGAGCGGACTCCTCCTGGGACTTTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR CAA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAGGTCACGTTTGTCTTTaGCTCAGTCTCTGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLGHVCL*LSLCLL
Trigger: CAACAAGCAGAGACTGAGCAAAAGACAAACGTGACC...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCAGGGAAACATTCTGTaGAGCAGCTTCAGCGCCTTC +
Preference number: 5 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLQGNIL*SSFSAF
Trigger: GAAGGCGCTGAAGCTGCTCAACAGAATGTTTCCCTG...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS TCA 90 bp CTCCAAAAATCAGCACTTTCTCCACTATGGCACTTATGTAGTAGTTaGGGATCTCCACGAGCTGTTCGGCTCCTCGGTCCATGTACATGG +
Preference number: 5 (lower is better)
Translates to: LQKSALSPLWHLCSS*GSPRAVRLLGPCTW
Trigger: CCATGTACATGGACCGAGGAGCCGAACAGCTCGTGGAGATCCTCAACTACTACATAAGTGCCATAGTGGAGAAAGTGCTGATTTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000027852.15
ENSMUST00000111439.8
ENSMUST00000111440.8
ENSMUST00000148550.8
ENSMUST00000155216.8
ENSMUST00000193149.2
CDS-3UTR CAA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTACTCAGTCTCTGCTTGTaGAAAAAGGAGAACTCTGTG +
Preference number: 5 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLLSLCL*KKENSV
Trigger: CACAGAGTTCTCCTTTTTCAACAAGCAGAGACTGAG...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAGATGTCACCATCCTCTaGACAGTGTCCATATCCAAA +
Preference number: 5 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLDVTIL*TVSISK
Trigger: TTTGGATATGGACACTGTCAAGAGGATGGTGACATC...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp ATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCACCTTCTTCAGCCTCCTaGGCTTCAAACAAGCCATGG +
Preference number: 5 (lower is better)
Translates to: MAPEAGTDNFILSNLAASPSSAS*ASNKPW
Trigger: CCATGGCTTGTTTGAAGCCAAGGAGGCTGAAGAAGG...TGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGAGTTCACAAACACAATaGTCACAGGGCGAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLSSQTQ*SQGEAQ
Trigger: CTGAGCTTCGCCCTGTGACAATTGTGTTTGTGAACT...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGAACGTTTCTGCAGTGGTaGCACCGATGGGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: AGTDNFILSNLAASDLDRTFLQW*HRWALS
Trigger: AGAAAGTGCCCATCGGTGCAACCACTGCAGAAACGT...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGACTGCAAGTGGAGGACTaGCCCTTCCATGTACCTAGA +
Preference number: 5 (lower is better)
Translates to: AGTDNFILSNLAASDLDRLQVED*PFHVPR
Trigger: TCTAGGTACATGGAAGGGCAAGTCCTCCACTTGCAG...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGAGTACCACCATTCCTaGCTCATGCTTAGCCAACAT +
Preference number: 5 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLEYHHS*LMLSQH
Trigger: ATGTTGGCTAAGCATGAGCAAGGAATGGTGGTACTC...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTAACATGAAGACCTTATaGATCTGGCCTCGGAAGACC +
Preference number: 5 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLNMKTL*IWPRKT
Trigger: GGTCTTCCGAGGCCAGATCAATAAGGTCTTCATGTT...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp TTCTCCACATGCATTTGGAAAGTCAGGGTGAGCAGATTGCAGGGAAACATTCTGAACATGAAGACCTTATaGATCTGGCCTCGGAAGACC +
Preference number: 5 (lower is better)
Translates to: FSTCIWKVRVSRLQGNILNMKTL*IWPRKT
Trigger: GGTCTTCCGAGGCCAGATCAATAAGGTCTTCATGTT...CAGAATGTTTCCCTGCAATCTGCTCACCCTGACTTTCCAAATGCATGTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148550.8
CDS-3UTR CAA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGTTCTGCTTTCTTATCTaGCTCATCCTGGACATCTCC +
Preference number: 5 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLFCFLI*LILDIS
Trigger: GGAGATGTCCAGGATGAGCAAGATAAGAAAGCAGAA...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp CTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCGGCCTAACAGAGTGCTaGAACATGTTATTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: LRKLAQTTLFFLILLLQTGLTEC*NMLFQV
Trigger: GACCTGGAATAACATGTTCAAGCACTCTGTTAGGCC...GGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTACTACTCCGGAAGCAATaGAAAACATTTGATTCCACT +
Preference number: 5 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLLLRKQ*KTFDST
Trigger: AGTGGAATCAAATGTTTTCAATTGCTTCCGGAGTAG...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTCGTCTTGACTCTATTTaGAAGATTGGTCTGTCGTTC +
Preference number: 5 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLRLDSI*KIGLSF
Trigger: GAACGACAGACCAATCTTCAAAATAGAGTCAAGACG...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTAAACAGGGCTTCCAGTaGCTTCTGCTTTCTTATCTT +
Preference number: 5 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLKQGFQ*LLLSYL
Trigger: AAGATAAGAAAGCAGAAGCAACTGGAAGCCCTGTTT...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp CCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTTATTCCAGGTCACGTTaGTCTTTTGCTCAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: PWLRKLAQTTLFFLILLLYSRSR*SFAQSL
Trigger: CAGAGACTGAGCAAAAGACAAACGTGACCTGGAATA...AAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTTATGGAAGTGAAAAGTaGCATGTCATCTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GTTMAPEAGTDNFILSNLYGSEK*HVICWP
Trigger: AGGCCAACAGATGACATGCAACTTTTCACTTCCATA...AAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGATTCTCGGGGAACTaGTATTTCCTAGGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: EAGTDNFILSNLAASDLDRFSGN*YFLGSS
Trigger: AGAGCTCCCTAGGAAATACAAGTTCCCCGAGAATCT...GTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp CCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGGATCTGGAAGTCATTTaGAGTTTCCAGGGAAGTGTT +
Preference number: 5 (lower is better)
Translates to: PPWLRKLAQTTLFFLILLDLEVI*SFQGSV
Trigger: AACACTTCCCTGGAAACTCAAAATGACTTCCAGATC...CAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp TGTGGGGCACCACCATGGCTCCGGAAGCTGGCACAGACAACTTTATTCTTTCTAATTCTGTTGTCTTCATaGTGGTGTATGAATTCCAAG +
Preference number: 5 (lower is better)
Translates to: CGAPPWLRKLAQTTLFFLILLSS*WCMNSK
Trigger: CTTGGAATTCATACACCACAATGAAGACAACAGAAT...TAGAAAGAATAAAGTTGTCTGTGCCAGCTTCCGGAGCCATGGTGGTGCCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GAAGCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGTCCGCTCTGGAACTaGAGGATTCTGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: EAGTDNFILSNLAASDLDSPLWN*RILLSS
Trigger: TGAAGACAACAGAATCCTCAAGTTCCAGAGCGGACT...GTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGAGCTCTGTCGGAAAATTaGTTAAAGTTGTCCCACTCT +
Preference number: 5 (lower is better)
Translates to: AGTDNFILSNLAASDLDRALSEN*LKLSHS
Trigger: AGAGTGGGACAACTTTAACAAATTTTCCGACAGAGC...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS-3UTR CAA 90 bp GCTGGCACAGACAACTTTATTCTTTCTAATCTTGCTGCTTCAGACCTCGACAGAAACTTGAGGATTCTGTaGTCTTCATTGTGGTGTATG +
Preference number: 5 (lower is better)
Translates to: AGTDNFILSNLAASDLDRNLRIL*SSLWCM
Trigger: CATACACCACAATGAAGACAACAGAATCCTCAAGTT...TCTGTCGAGGTCTGAAGCAGCAAGATTAGAAAGAATAAAGTTGTCTGTGCCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS CAA 90 bp GATCTCCAGGCTGCACTTAATCACCACCGTGATGATGTTCTTCAGTaGCTTTCGTTCCACTTTCCACAGGGCCAGCAAGGCATCACCTGC +
Preference number: 6 (lower is better)
Translates to: DLQAALNHHRDDVLQ*LSFHFPQGQQGITC
Trigger: GCAGGTGATGCCTTGCTGGCCCTGTGGAAAGTGGAACGAAAGCAACTGAAGAACATCATCACGGTGGTGATTAAGTGCAGCCTGGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000027852.15
ENSMUST00000111439.8
ENSMUST00000111440.8
ENSMUST00000148550.8
ENSMUST00000193149.2
CDS TCA 72 bp TCAGCACTTTCTCCACTATGGCACTTATGTAGTAGTTaGGGATCTCCACGAGCTGTTCGGCTCCTCGGTCCA +
Preference number: 6 (lower is better)
Translates to: SALSPLWHLCSS*GSPRAVRLLGP
Trigger: TGGACCGAGGAGCCGAACAGCTCGTGGAGATCCTCAACTACTACATAAGTGCCATAGTGGAGAAAGTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000027852.15
ENSMUST00000111439.8
ENSMUST00000111440.8
ENSMUST00000148550.8
ENSMUST00000155216.8
ENSMUST00000193149.2
CDS CCA 72 bp CACACTGAGGTTGACTCCAGGAAACCATTGAAAAGTTaGGGGGACAGAACCAACTCCACGAACGTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: HTEVDSRKPLKS*GDRTNSTNVSS
Trigger: AGAGGAAACGTTCGTGGAGTTGGTTCTGTCCCCCCAACTTTTCAATGGTTTCCTGGAGTCAACCTCAGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000027852.15
CDS TCA 72 bp ATCAACAAACATCAGAACTCCATCAAAACATTTTACTaGCGGCCGTTCCGGAGAGAAATCTCCGTAGACGAT +
Preference number: 6 (lower is better)
Translates to: INKHQNSIKTFY*RPFRREISVDD
Trigger: ATCGTCTACGGAGATTTCTCTCCGGAACGGCCGTCAGTAAAATGTTTTGATGGAGTTCTGATGTTTGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000027852.15
ENSMUST00000111439.8
ENSMUST00000111440.8
ENSMUST00000148550.8
ENSMUST00000155216.8